BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144930.1 - phase: 0 /pseudo
(1322 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g10670 pseudogene 56 1e-07
At4g03770 hypothetical protein 54 5e-07
At1g37180 hypothetical protein 52 2e-06
At3g31520 hypothetical protein 50 9e-06
At2g14400 putative retroelement pol polyprotein 48 3e-05
At1g20390 hypothetical protein 47 6e-05
At3g30655 hypothetical protein, 3' partial 46 1e-04
At2g06160 putative Athila retroelement ORF1 protein 45 3e-04
At4g08050 44 5e-04
At3g32890 Athila ORF 1, putative 44 8e-04
At1g38440 hypothetical protein 44 8e-04
At2g07480 F9A16.15 43 0.001
At4g07640 putative athila transposon protein 42 0.002
At4g07360 42 0.003
At1g41690 hypothetical protein 41 0.004
At1g41780 hypothetical protein 41 0.005
At2g06310 putative Athila retroelement ORF1 protein 39 0.015
At1g37060 Athila retroelment ORF 1, putative 39 0.015
At1g26150 Pto kinase interactor, putative 39 0.015
At4g07620 putative athila transposon protein 38 0.044
>At2g10670 pseudogene
Length = 929
Score = 56.2 bits (134), Expect = 1e-07
Identities = 77/313 (24%), Positives = 120/313 (37%), Gaps = 72/313 (23%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ + R G K N D + F SL + A W +L KN I
Sbjct: 84 NKFHGLPMEDPLDHLDELERLCGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPKNSI 143
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 296
T+D+ AF + + N+R R + + K+ ESF E +R++G T
Sbjct: 144 TTWDDCKMAFLAKFFSNSRTARLRNEISGFTLKQNESFCEAWERFKGYQ---TKCPHHGF 200
Query: 297 MTQTFLKTLKKDYVE--RMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEK-AESSVNASK 353
+ L TL + + RM++ +N G L++ + +G + E A+S N ++
Sbjct: 201 SQASLLNTLYRGVLPKIRMLLDTASN-------GNFLKKDIEEGWELVENLAQSGGNYNE 253
Query: 354 RYGNG----------HHKK----------------------KETEIGMVSAGAGQSMATV 381
YG HH++ E E V G A +
Sbjct: 254 DYGRSIYTSSNTDDKHHREMKALNDKLDKIIQMQQKHVHFISEDEPFQVQEGENDQCAEI 313
Query: 382 A---------PINAAQMPPSYPYVPYSQHPFFPP------FYHQYPLPPG------QPQV 420
P AA P+ P+VPY+Q F P Y Q PPG Q
Sbjct: 314 RYVHNQGPSLPSAAAAAEPTKPFVPYNQSLGFVPKQQFQGGYQQQQPPPGFTPHQQQAHA 373
Query: 421 PVNAIAQQMKQQL 433
P N+ + QQL
Sbjct: 374 PQNSDIMTVLQQL 386
>At4g03770 hypothetical protein
Length = 464
Score = 54.3 bits (129), Expect = 5e-07
Identities = 51/200 (25%), Positives = 84/200 (41%), Gaps = 21/200 (10%)
Query: 129 IPVTKTMEEMMEELAKELRHEIKANRGNAD-----SFKTQDLCLVSKVDV--PKKFKIPD 181
+ + K EM +L + H ++ N D S T ++S + P K +I
Sbjct: 181 LSLAKAENEM--KLVRSQMHNAVSSAPNIDRILEESHNTPFTHMISNAIISDPGKLRI-- 236
Query: 182 FDRYNGLTCPQNH----IIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIH 237
+ +NG + P+ H II R ++ D+ + H F + L A W+T L N +
Sbjct: 237 -EYFNGSSDPKGHLKLFIISVARAKFRPEERDAGLCHLFVEHLKGPALNWFTRLKGNSVD 295
Query: 238 TFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEM 297
+F EL+ F Y + L SLSQ+ E R++ ++R A++ D
Sbjct: 296 SFQELSTLFLKQYSVLIDPSTSDADLWSLSQQPNEPLRDFLAKFRSTLAKVEGIND---- 351
Query: 298 TQTFLKTLKKDYVERMIIAA 317
L TLKK R ++A
Sbjct: 352 -LAALSTLKKALCLRARLSA 370
>At1g37180 hypothetical protein
Length = 661
Score = 52.4 bits (124), Expect = 2e-06
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 74 PSTAAGTSGTANNVLI--PATNAASINATLPQTTA----AVTEPLVHTMPQSVNINTQHG 127
PS GT+ T N PA AA N T+ +T A+ P+ + +N++
Sbjct: 205 PSVEVGTTSTQNPTTSSSPAGFAAVSNETIARTLVPLDPAIRLPISDPRQEPSAVNSELQ 264
Query: 128 SIP----VTKTMEEMMEELAKELRHEIKANRGNADSFKTQDLCLVSKVDVP--KKFKIPD 181
S+ A E+ I+A R +T +SK+ + + FK+P
Sbjct: 265 SLQDQIWAMNAKVHQATTSAPEVEKVIEATR------RTPFTPRISKLRIREFRDFKLPV 318
Query: 182 FDRYNGLTCPQNHIIKY---VRKMG-NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIH 237
YNG P H+ + VR++ + D+ + F ++L A W+T L + I
Sbjct: 319 ---YNGKGDPNEHLTSFQVIVRRVPLEPYEEDAGLCKLFSENLSGPALTWFTQLEEGSID 375
Query: 238 TFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREY 277
F +L+ AF YG+ + L +LSQ ++ R Y
Sbjct: 376 NFKQLSTAFIKQYGYFIKSDITEAHLWNLSQSADDPLRTY 415
>At3g31520 hypothetical protein
Length = 528
Score = 50.1 bits (118), Expect = 9e-06
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 174 PKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYK----DNDSLMIHCFQDSLMEDAAEWYT 229
P K +I + +NG + P+ H+ ++ + K + D+ + H F + L A W++
Sbjct: 239 PGKLRI---EYFNGSSDPKRHLKSFIISVARTKFRPEERDAGLCHLFVEHLKGPALCWFS 295
Query: 230 SLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARI 288
L N + +F EL+ F Y L + L SLSQ+ E R++ + R A++
Sbjct: 296 RLEGNSMDSFQELSTLFLKQYSVLIDLGTSDADLWSLSQQPNEPLRDFLAKLRSTLAKV 354
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 48.1 bits (113), Expect = 3e-05
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 131 VTKTMEEMMEELAKELRHEIKANRGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTC 190
V++ ++EM + + E NR + +T ++ + + K+ + + YNGL
Sbjct: 112 VSRELKEMRSKFLQATSSEPDINRVIEKARQTPFTPQITSLRIRDSRKL-NLESYNGLED 170
Query: 191 PQNHIIKYVRKMG----NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAF 246
P+ ++ ++ G N D D F ++L A W+T L I F+EL+ F
Sbjct: 171 PKGYLAAFLIAAGRVDLNEADEDVRYCKLFSENLCGQALMWFTQLEPGSISNFNELSVVF 230
Query: 247 KSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARIT 289
Y + L +LSQ E+ R + +++ ++++
Sbjct: 231 LKQYSILMDKSISDTDLWNLSQGPNETLRAFITKFKYVLSKLS 273
>At1g20390 hypothetical protein
Length = 1791
Score = 47.4 bits (111), Expect = 6e-05
Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 5/220 (2%)
Query: 133 KTMEEMMEELAKELRHEIKANRGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQ 192
+T+ EM ++ + + +R ++ +T ++ V + KI + YNG P+
Sbjct: 126 RTISEMSSKIHRATSTAPELDRVLEETQQTPFTRRITNVSIRGAQKIK-LESYNGRNDPK 184
Query: 193 NHIIKY---VRKMGNYKDN-DSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKS 248
+ + + + DN D+ F + L A W++ L N I +F +L ++F
Sbjct: 185 EFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLK 244
Query: 249 HYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKD 308
HY + + L S+SQ +ES R + R++ IT + +
Sbjct: 245 HYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAIVALRNAVWYDSR 304
Query: 309 YVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 348
+ + + + AP+ + + +R E + +I+ K S+
Sbjct: 305 FRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 344
>At3g30655 hypothetical protein, 3' partial
Length = 660
Score = 46.2 bits (108), Expect = 1e-04
Identities = 31/107 (28%), Positives = 54/107 (49%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R G K N D + F SL + A W +L +N I
Sbjct: 52 NKFHGLPMEDPLDHLDEFERLYGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPQNSI 111
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRG 283
+D+ AF + + N+R R + +QK+ ESF E +R++G
Sbjct: 112 TAWDDCKKAFLAKFFSNSRTARLRNEISGFTQKQNESFGEAWERFKG 158
>At2g06160 putative Athila retroelement ORF1 protein
Length = 750
Score = 45.1 bits (105), Expect = 3e-04
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 5/163 (3%)
Query: 204 NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFL 263
N D F SL + W +L +N I T+D+ AF + + N+R R +
Sbjct: 79 NGVSEDGFKFRLFPFSLGDKTHLWEKTLPQNSITTWDDCKKAFFAKFFSNSRTARLRNEI 138
Query: 264 RSLSQKKEESFREYAQRWRGAAARIT-PALDEEEMTQTFLKTLKKDYVERMIIAAPNNF- 321
+QK+ ESF E +R++G + P + + T + + + A+ NF
Sbjct: 139 SGFTQKQNESFCEAWERFKGYQTKCPHPGFKQASLLSTLYRGVLPKLRMLLDTASNGNFL 198
Query: 322 SEMVTMGTRLEE--AVRDGIIVFEKAESSVNASKRYGNGHHKK 362
++ V G L E A DG E + S++ S + HH++
Sbjct: 199 NKDVEKGWELVENLAQSDG-NYNENYDKSISTSSESDDKHHRE 240
>At4g08050
Length = 1428
Score = 44.3 bits (103), Expect = 5e-04
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +LS + I
Sbjct: 52 NKFHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSI 111
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRG 283
T+D+ AF S + N R R + SQK ESF E +R++G
Sbjct: 112 TTWDDYKKAFLSKFFSNARTARLRNEIYGFSQKTGESFCEAWERFKG 158
>At3g32890 Athila ORF 1, putative
Length = 755
Score = 43.5 bits (101), Expect = 8e-04
Identities = 32/107 (29%), Positives = 51/107 (46%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +L + I
Sbjct: 5 NKFHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSI 64
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRG 283
T+D+ AF S + N R R + SQK ESF E +R++G
Sbjct: 65 TTWDDCKKAFLSKFFSNARTARLRNEISGFSQKTRESFCEAWERFKG 111
>At1g38440 hypothetical protein
Length = 263
Score = 43.5 bits (101), Expect = 8e-04
Identities = 32/107 (29%), Positives = 51/107 (46%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +L + I
Sbjct: 5 NKFHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSI 64
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRG 283
T+D+ AF S + N R R + SQK ESF E +R++G
Sbjct: 65 TTWDDCKKAFLSKFFSNARTARLRNEISGFSQKTSESFCEAWERFKG 111
>At2g07480 F9A16.15
Length = 1012
Score = 43.1 bits (100), Expect = 0.001
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ + R K N +S + F SL + A W +L I
Sbjct: 47 NKFHGLPMEDPLDHLDNFDRLCSLTKINGVSEESFKLRLFPFSLGDKAHLWEKTLPVKSI 106
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 296
T+D+ AF + + N+R R + +QK ESF E +R++G + P +
Sbjct: 107 DTWDDCKKAFLAKFFSNSRKARLRSEISGFNQKNSESFSEAWERFKGYTTQ-CPHHESLP 165
Query: 297 MTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEK-AESSVNASKRY 355
+ L+ L K RM++ +N G L + V +G + E A+S N ++ Y
Sbjct: 166 PQYSILRCLPK---IRMLLDTASN-------GNILNKDVAEGWELVENLAQSHRNYNEDY 215
Query: 356 GNGHHKKKETE 366
+ ++E
Sbjct: 216 DRTNRGSSDSE 226
Score = 33.9 bits (76), Expect = 0.64
Identities = 37/177 (20%), Positives = 71/177 (39%), Gaps = 17/177 (9%)
Query: 261 EFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNN 320
E + +L+Q +Y + RG++ D E+ + +KTL D ++++++A N
Sbjct: 199 ELVENLAQSHRNYNEDYDRTNRGSS-------DSEDKHKKEIKTLN-DRIDKLVLAQQRN 250
Query: 321 FSEMVTMG-TRLEEAVRDGIIVFEKAESSVNASKRYGNGHHKKKETEIGMVSAGAGQSMA 379
+ T+L++ + + + E + G ++K + S
Sbjct: 251 VYYITEEELTQLQDG--ENLTIEEVSYLQNQGGYNKGFNNYKPPHPNLSYRSNNVANPQD 308
Query: 380 TVAPINAAQMPPSYPYVPYSQ-----HPFFPPFYHQYPLPPGQPQVPVNAIAQQMKQ 431
V P Q + P+VPY+Q F PP + Q P P + + QQ+ Q
Sbjct: 309 QVYPPQN-QPTQAKPFVPYNQGYNQKQNFGPPGFTQQPQQPSAQDSEMKTLPQQLVQ 364
>At4g07640 putative athila transposon protein
Length = 866
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/121 (28%), Positives = 54/121 (43%), Gaps = 11/121 (9%)
Query: 167 LVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLME 222
L+S + K + +P D P +H+ ++ R K N D + F SL +
Sbjct: 45 LISMIQGNKFYGLPMED-------PLDHLDEFDRLCNLTKINGVSADGFKLRLFPFSLGD 97
Query: 223 DAAEWYTSLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWR 282
A W +L + I T+D+ AF S + N R R + SQK ESF E +R++
Sbjct: 98 KAHIWEKNLPHDSIITWDDCKKAFLSKFFSNARTARLRNEISGFSQKTGESFCEAWERFK 157
Query: 283 G 283
G
Sbjct: 158 G 158
>At4g07360
Length = 675
Score = 41.6 bits (96), Expect = 0.003
Identities = 68/290 (23%), Positives = 105/290 (35%), Gaps = 52/290 (17%)
Query: 191 PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAF 246
P +H+ ++ R K N D + F SL + A W +L + I T+D+ AF
Sbjct: 4 PLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLLHDSITTWDDCKKAF 63
Query: 247 KSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQTFLKTLK 306
S + N R R + SQK ES E +R++ E+ +T T
Sbjct: 64 LSKFFSNARTARLRNEISGFSQKTGESLCEAWERFKDGNY-------NEDCDRTVKGTAD 116
Query: 307 KDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVNASKRYGNGHHKKKETE 366
D R E+ T+ +L D I++ ++ H + E
Sbjct: 117 SDDKHR---------KEIKTLNDKL-----DRILLSQQKHV------------HFLVDDE 150
Query: 367 IGMVSAGAGQSMATVAPINAAQMPPSYPYVPYSQ----HPFFPPFYHQYPLPPGQPQVPV 422
V G G + Q + P+VPY+Q F Y Q P P PQ
Sbjct: 151 QFQVQDGEGNL------LEEQQQGQNKPFVPYNQGFVPKQQFQGNYQQQPPPGFAPQQNQ 204
Query: 423 NAIAQQMKQQLPVQQQQNQQARPTFPPIPMLYAELLPTLLHRGHCTTRQG 472
A + + VQQ Q+ + M A+ L L H+ C+ + G
Sbjct: 205 GPAAPDAEMKQMVQQLLQGQSSSS-----MEIAKKLSELHHKLDCSYQSG 249
>At1g41690 hypothetical protein
Length = 371
Score = 41.2 bits (95), Expect = 0.004
Identities = 46/182 (25%), Positives = 82/182 (44%), Gaps = 19/182 (10%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +L + I
Sbjct: 52 NKFHGLPMEDPLDHLDEFERLCSLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPQGSI 111
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 296
T+D+ AF + + +R R + +QK+ ESF E +R++G T
Sbjct: 112 TTWDDCKKAFLAKFFSYSRTARLRNEISGFTQKQSESFCEAWERFKGYQ---TKCPHHGF 168
Query: 297 MTQTFLKTLKKDYVE--RMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEK-AESSVNASK 353
+ L TL + + RM++ +N G L++ V +G + EK A+S N ++
Sbjct: 169 KQASLLSTLYRGVLPKIRMLLDTASN-------GNFLKKDVEEGWELVEKFAQSDGNYNE 221
Query: 354 RY 355
Y
Sbjct: 222 DY 223
>At1g41780 hypothetical protein
Length = 246
Score = 40.8 bits (94), Expect = 0.005
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 174 PKKFKIPDFDRYNGLTCPQNHI----IKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYT 229
P+K +I + ++G + P+ H+ I R +++D+ + H F + L +W++
Sbjct: 138 PEKLRI---EYFSGSSDPKGHLKSFKISVARAKFKPEESDAGLCHLFVEHLKGPVLDWFS 194
Query: 230 SLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRW 281
L N + +F EL+ F Y + L SLSQ+ E ++ ++
Sbjct: 195 RLEGNSVDSFQELSTLFLKQYSVLIDPGTSDVDLWSLSQQPNEPLSDFLTKF 246
>At2g06310 putative Athila retroelement ORF1 protein
Length = 733
Score = 39.3 bits (90), Expect = 0.015
Identities = 62/263 (23%), Positives = 103/263 (38%), Gaps = 26/263 (9%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P NH+ ++ R K N D + F SL A W +L + I
Sbjct: 52 NKFHGLPMEDPLNHLDEFDRLCNLTKINGVIEDGFNLRLFPFSLGGKAHIWEKNLPHDSI 111
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWR------GAAARITP 290
T+D+ AF S + N R R + QK ESF E +R++ +
Sbjct: 112 TTWDDCKKAFLSKFFSNARTARLRNEISGFLQKAGESFCEAWERFKDGNYNEDCDRTVRS 171
Query: 291 ALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVN 350
D ++ + +K L D ++R++++ + +V + V+DG + K ++
Sbjct: 172 TADSDDKHRKEIKAL-NDKLDRILLSQQKHVHFLV---DDEKYQVQDGRVTSWKKSATST 227
Query: 351 ASKRYGNGHHKKKETEIGMVSAGAGQSMATVAPINAAQMPPSYPYVPYSQHPFFPPFYHQ 410
++ G K T S A Q++ V Y P P F P +Q
Sbjct: 228 TTRVATKGITTSKPTT--PTSPTAAQTLLIVKIKCILHNNNKGNYQP-QPPPGFAPQQNQ 284
Query: 411 YPLPPGQPQVPVNAIAQQMKQQL 433
P P A +QM QQL
Sbjct: 285 GPATP-------EADMKQMVQQL 300
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 39.3 bits (90), Expect = 0.015
Identities = 68/316 (21%), Positives = 112/316 (34%), Gaps = 69/316 (21%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A +W SL + I
Sbjct: 52 NKFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSLGDKAHQWEKSLPQGSI 111
Query: 237 HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARIT--PALDE 294
++++ AF + + N+R R + +Q E+F E +R++G + L +
Sbjct: 112 TSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWERFKGYQTQCPHHEMLLD 171
Query: 295 EEMTQTFLKTLKKD--YVERMIIAAPNNFS-------------------EMVTMGTRLEE 333
FL +D V + + N++ EM M +L++
Sbjct: 172 TASNGNFLNKDVEDGWEVVENLAQSDGNYNEDYDRSIRTSSDSDEKHRREMKAMNDKLDK 231
Query: 334 ------------------AVRDGIIVFEKAESSVNASKRYGNG--HHKKKETEIGMVSAG 373
V+DG + + S V Y G + K+ + S
Sbjct: 232 LLLMQQKHIHFLGDDETLQVQDGETLQLEEVSYVQNQGGYNKGFNNFKQNHPNLSYRSTN 291
Query: 374 AGQSMATVAPINAAQMPPSYPYVPYSQHPFFPPFYHQYPLPPGQPQVPVNAIAQQMKQQL 433
V P P P+VPY+Q GQ VP +QQL
Sbjct: 292 VANRQDQVYPSQQQNQPK--PFVPYNQ---------------GQGYVPKQQYQGNYQQQL 334
Query: 434 P---VQQQQNQQARPT 446
P QQQ Q A T
Sbjct: 335 PPPGFTQQQQQPALTT 350
>At1g26150 Pto kinase interactor, putative
Length = 760
Score = 39.3 bits (90), Expect = 0.015
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 16/100 (16%)
Query: 386 AAQMPPS---YPYVPYSQHPFFPPFYHQYPL--PPGQPQVPVNAIAQQMKQQLPVQQQQN 440
A+++PP P P S+ P PP ++P PPG P+ K+ P +
Sbjct: 188 ASEIPPPPRHLPSPPASERPSTPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPS 247
Query: 441 QQARPTFPPIPMLYAELLPTLLHRGHCTTRQGKPPPDPLP 480
RP P P E LP KP PDPLP
Sbjct: 248 DSKRPVHPSPPSPPEETLP-----------PPKPSPDPLP 276
>At4g07620 putative athila transposon protein
Length = 683
Score = 37.7 bits (86), Expect = 0.044
Identities = 53/224 (23%), Positives = 84/224 (36%), Gaps = 25/224 (11%)
Query: 236 IHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEE 295
I+++D+ F + + N R R + +QK E+F + W + T
Sbjct: 90 INSWDDCKKVFLAKFFSNVRTARLRNEISGFNQKNNETF---CEAWERFKSYTTQCPHHG 146
Query: 296 EMTQTFLKTLKKDYVE--RMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS----- 348
+ L TL + + RM++ P+N G L + V +G + E S
Sbjct: 147 FKKASLLSTLYRGALPKIRMLLDTPSN-------GNFLNKDVEEGWELVENLAQSDGCYN 199
Query: 349 --VNASKRYGNGHHKKKETEIGMVSAGAGQSMATVAPINAAQMPPSYPYVPYSQ----HP 402
+ S R G K+ +I ++ + + Q S P+V Y+Q
Sbjct: 200 EDYDRSVRGTGGSEDKQSKDIKALNEKSTNVANPQDKVYPPQQNQSKPFVQYNQGYVPKQ 259
Query: 403 FFPPFYHQYPLPPGQPQVPVNAIAQQMK--QQLPVQQQQNQQAR 444
F Y Q PPG Q P A+A Q +QL Q Q Q R
Sbjct: 260 QFNGGYQQQNSPPGFTQQPQPALAAQDPDIKQLIQQIIQGQATR 303
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.332 0.143 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,766,009
Number of Sequences: 26719
Number of extensions: 1323026
Number of successful extensions: 4694
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 4371
Number of HSP's gapped (non-prelim): 262
length of query: 1322
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1211
effective length of database: 8,352,787
effective search space: 10115225057
effective search space used: 10115225057
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 66 (30.0 bits)
Medicago: description of AC144930.1