BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144723.3 + phase: 0 
         (127 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g56170 predicted GPI-anchored protein                              169  3e-43
At2g20700 predicted GPI-anchored protein                              145  5e-36
At4g28280 putative GPI-anchored protein                               142  6e-35
At3g19300 unknown protein                                              35  0.013
At1g55850 putative cellulose synthase catalytic subunit (At1g55850)    26  4.7
At4g21040 putative protein                                             26  6.2
At5g32620 putative protein                                             25  8.1
At2g43070 unknown protein                                              25  8.1

>At5g56170 predicted GPI-anchored protein
          Length = 168

 Score =  169 bits (428), Expect = 3e-43
 Identities = 77/120 (64%), Positives = 93/120 (77%), Gaps = 3/120 (2%)

Query: 11  CSVNFEFLNYTIITSKCKGPKYPPKECCGSFKEFACPYADVINDLTNDCASTMFSYINLY 70
           C VNFEF+NYTIITSKCKGPKYPPKECCG+FK+FACPY D +NDL++DCA+TMFSYINLY
Sbjct: 49  CPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLY 108

Query: 71  GRYPPGLFASECREGKEGLACDA---LPPSVSADDTANQIVHTPSLVLVLTACIFLILLF 127
           G+YPPGLFA++C+EGKEGL C A   LPP  SA+  A     +   + V  A +  + LF
Sbjct: 109 GKYPPGLFANQCKEGKEGLECPAGSQLPPETSAEVNAATTSSSRLWLTVSAALLVFVKLF 168


>At2g20700 predicted GPI-anchored protein
          Length = 181

 Score =  145 bits (366), Expect = 5e-36
 Identities = 67/117 (57%), Positives = 83/117 (70%)

Query: 11  CSVNFEFLNYTIITSKCKGPKYPPKECCGSFKEFACPYADVINDLTNDCASTMFSYINLY 70
           C  +F   NYTIITS+CKGP YP   CC +FK+FACP+A+V+ND  NDCASTMFSYINLY
Sbjct: 62  CKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLY 121

Query: 71  GRYPPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFLILLF 127
           GRYPPG+FA+ C+EGKEGL C  +  S SA   +     T + + VL+  + L LLF
Sbjct: 122 GRYPPGIFANMCKEGKEGLDCTDVTQSASATSDSIPRASTTASLAVLSTFLVLCLLF 178


>At4g28280 putative GPI-anchored protein
          Length = 160

 Score =  142 bits (357), Expect = 6e-35
 Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 7   APAGCSVNFEFLNYTIITSKCKGPKYPPKECCGSFKEFACPYADVINDLTNDCASTMFSY 66
           A A C  +F   NYTIITSKCKGP YP K CC +FK+FACP+A+V+ND   DCASTMFSY
Sbjct: 44  AKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSY 103

Query: 67  INLYGRYPPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFL 123
           INLYGRYPPG+FA+ C+EGKEGL C  + P+ S+   +  +V T  L++ ++    L
Sbjct: 104 INLYGRYPPGIFANMCKEGKEGLDCTDVTPT-SSSHASIPLVSTHVLLITVSILFHL 159


>At3g19300 unknown protein
          Length = 663

 Score = 34.7 bits (78), Expect = 0.013
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 11/76 (14%)

Query: 6  IAPAGCSVNFEFLNYTIITSKCKGPKYPPKECCGSFKEF----ACPYAD------VINDL 55
          +  AGC ++F   N+T++ S C       K CC     F       YA+      V +DL
Sbjct: 25 LTEAGCPLDFTSSNFTLVASVCSNNTERAK-CCRYMNAFVAISVARYANYTADLGVTSDL 83

Query: 56 TNDCASTMFSYINLYG 71
          T  C +T+   + LYG
Sbjct: 84 TEICITTISRTMELYG 99


>At1g55850 putative cellulose synthase catalytic subunit (At1g55850)
          Length = 729

 Score = 26.2 bits (56), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 43  EFACPYADVINDLTNDCASTMFSYIN 68
           ++ CP  DVI  LT  C     +Y+N
Sbjct: 436 KYGCPVEDVITGLTIQCRGWKSAYLN 461


>At4g21040 putative protein
          Length = 232

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 10/26 (38%), Positives = 12/26 (45%)

Query: 58 DCASTMFSYINLYGRYPPGLFASECR 83
          D  +T F Y N Y  + P  F   CR
Sbjct: 31 DSDNTKFCYYNNYSEFQPRYFCKNCR 56


>At5g32620 putative protein
          Length = 301

 Score = 25.4 bits (54), Expect = 8.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 74  PPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSL 113
           PPG+ A++ +  K  +  +   P+   DD+   + H  +L
Sbjct: 215 PPGVKAAKAKGRKSAIVKEGKKPATVKDDSGQSVEHFQNL 254


>At2g43070 unknown protein
          Length = 543

 Score = 25.4 bits (54), Expect = 8.1
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 81  ECREGKEGLACDALPPSVSADDTANQIVH---TPSLVLVLTACIFLILLF 127
           +  E    LA D        DD   +I+    T ++  ++TA IFL+LLF
Sbjct: 222 QANESYSILAKDVSSAGTRKDDPEKEILDISVTGAVFFIVTASIFLLLLF 271


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.141    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,099,506
Number of Sequences: 26719
Number of extensions: 121944
Number of successful extensions: 326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 317
Number of HSP's gapped (non-prelim): 8
length of query: 127
length of database: 11,318,596
effective HSP length: 87
effective length of query: 40
effective length of database: 8,994,043
effective search space: 359761720
effective search space used: 359761720
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)