BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141863.8 - phase: 0
(271 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g26340 26S proteasome beta subunit like protein 456 e-129
At1g13060 proteasome epsilon chain precursor 447 e-126
At4g31300 multicatalytic endopeptidase complex, proteasome precu... 101 4e-22
At5g40580 20S proteasome beta subunit PBB2 82 2e-16
At3g27430 20S proteasome beta subunit (PBB1) 81 7e-16
At1g53850 unknown protein 70 9e-13
At3g14290 20S proteasome subunit PAE2 69 3e-12
At1g21720 20S proteasome beta subunit PBC2 like protein 66 2e-11
At1g77440 putative 20S proteasome beta subunit PBC2 65 5e-11
At4g14800 proteasome chain protein 55 4e-08
At3g22630 multicatalytic endopeptidase complex, proteasome compo... 54 9e-08
At1g79210 unknown protein 53 2e-07
At1g16470 20S proteasome subunit PAB1 52 3e-07
At3g60820 proteasome component C5 50 1e-06
At3g22110 20S proteasome subunit PAC1 48 6e-06
At5g66140 20S proteasome subunit PAD2 46 2e-05
At3g51260 multicatalytic endopeptidase complex alpha chain 44 9e-05
At1g56450 putative protein (At1g56450) 39 0.004
At4g15160 cell wall protein like 34 0.073
At1g47250 20S proteasome subunit PAF2 33 0.12
>At3g26340 26S proteasome beta subunit like protein
Length = 273
Score = 456 bits (1172), Expect = e-129
Identities = 226/270 (83%), Positives = 242/270 (88%), Gaps = 2/270 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ LE+ +I G N + S+ PSF LP + DFDGF K+ ++MVKPAKGTTTLA
Sbjct: 3 LDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYK+DMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEAA 269
KLSGDDVGELHYHY PV P T E M EAA
Sbjct: 243 KLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
>At1g13060 proteasome epsilon chain precursor
Length = 274
Score = 447 bits (1149), Expect = e-126
Identities = 222/269 (82%), Positives = 240/269 (88%), Gaps = 2/269 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ E+ +I G + + E+S+ PSF LP + +FDGF K+ M+K AKGTTTLA
Sbjct: 3 LDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYKYDMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
KLSGDDVGELHYHY PV P+T EQ M EA
Sbjct: 243 KLSGDDVGELHYHYYPVAPATAEQVMEEA 271
>At4g31300 multicatalytic endopeptidase complex, proteasome
precursor, beta subunit
Length = 233
Score = 101 bits (252), Expect = 4e-22
Identities = 67/221 (30%), Positives = 111/221 (49%), Gaps = 7/221 (3%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
H + + + +V ++ L+ + Y+ + M L G ++ GWD+ G Y GG
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGG 130
Query: 174 RLKGNRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYY 232
+ F++G SGS Y YG D +K +M+ EEA +L +A+ A RDGASGGV
Sbjct: 131 TVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVI 190
Query: 233 VGPTGWKK--LSGDDVGELHYHYNPVTPSTVEQEMVEAAGP 271
+ G + GD +L + + P +++ AAGP
Sbjct: 191 INSEGVTRNFYPGD---KLQLWHEELEPQNSLLDILNAAGP 228
>At5g40580 20S proteasome beta subunit PBB2
Length = 274
Score = 82.4 bits (202), Expect = 2e-16
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+ RLH R V A LL L+SY+G +S ++ G D TGP L+ + G
Sbjct: 99 SSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGS 157
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG 225
++GSGS A V ++ YK ++ +E +L AI F D SG
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSG 209
>At3g27430 20S proteasome beta subunit (PBB1)
Length = 273
Score = 80.9 bits (198), Expect = 7e-16
Identities = 56/172 (32%), Positives = 88/172 (50%), Gaps = 1/172 (0%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTT + IFK+GV++ AD+RA+ G ++ ++ +KI + P + AG AAD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+ RLH R V A LL L+SY+G +S ++ G D TGP L+ + G
Sbjct: 99 SSQLRLHRYQTGRDSRVITALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGS 157
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG 225
++GSGS A V ++ YK ++ +E +L +I F D SG
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSG 209
>At1g53850 unknown protein
Length = 237
Score = 70.5 bits (171), Expect = 9e-13
Identities = 51/177 (28%), Positives = 89/177 (49%), Gaps = 12/177 (6%)
Query: 42 VKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 101
V+ I+ +K G+T + KEGV++A + R + + SV+KI+EI+ ++ M+G
Sbjct: 24 VEYAIEAIK--LGSTAIGVKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSG 80
Query: 102 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG--------LSVGT 153
AD + + ++ + H + ++V ++ L ++ + G G V
Sbjct: 81 LIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRF-GEGEEESMSRPFGVSL 139
Query: 154 MIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELA 210
+IAG DE GP LYY D G + N ++GSGS A L + D+S++EA +A
Sbjct: 140 LIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIA 196
>At3g14290 20S proteasome subunit PAE2
Length = 237
Score = 68.9 bits (167), Expect = 3e-12
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 42 VKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 101
V+ I+ +K G+T + KEGV++A + R + + SV+KI+EI+ ++ M+G
Sbjct: 24 VEYAIEAIK--LGSTAIGVKTKEGVVLAVEKRIT-SPLLEPSSVEKIMEIDDHIGCAMSG 80
Query: 102 GAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG--------LSVGT 153
AD + + ++ + H + ++V ++ L ++ + G G V
Sbjct: 81 LIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRF-GEGEEESMSRPFGVSL 139
Query: 154 MIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELA 210
+IAG DE GP LYY D G + N ++GSGS A L + D++++EA +A
Sbjct: 140 LIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIA 196
>At1g21720 20S proteasome beta subunit PBC2 like protein
Length = 204
Score = 65.9 bits (159), Expect = 2e-11
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 8 GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRL 67
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 172
+ +L++L +R + + L++ ILY R +IAG D+ P + +DS G
Sbjct: 68 VFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIG 127
Query: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
+ F V G+ S YG ++ YK DM EE E +A+ + RD SG VY
Sbjct: 128 AKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVY 187
Query: 232 YVGPTGWKK 240
V PT K+
Sbjct: 188 IVTPTEIKE 196
>At1g77440 putative 20S proteasome beta subunit PBC2
Length = 204
Score = 64.7 bits (156), Expect = 5e-11
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
G+ +A + K +A+D R + + ++I +I+ ++ ++G A D Q ++ L
Sbjct: 8 GSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRL 67
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAG-WDETGPGLYYVDSEG 172
+ +L++L +R + + L++ ILY R +IAG D+ P + +DS G
Sbjct: 68 VFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIG 127
Query: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
+ F V G+ S YG ++ +K DM EE E +A+ + RD SG VY
Sbjct: 128 AKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVY 187
Query: 232 YVGP 235
V P
Sbjct: 188 VVTP 191
>At4g14800 proteasome chain protein
Length = 199
Score = 55.1 bits (131), Expect = 4e-08
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 67 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 126
+VAAD+ A + KI+ ++ + L +G D + + L++ N
Sbjct: 14 IVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGI 73
Query: 127 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGNRFSVGS 184
+S A+ + + R SV ++AG+D E G LYY+D K ++ + G
Sbjct: 74 PLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGY 133
Query: 185 GSPYAYGVLDSGYKYDMSVEEASELARRAI 214
GS ++ +D Y+ DMSVEEA EL + I
Sbjct: 134 GSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163
>At3g22630 multicatalytic endopeptidase complex, proteasome
component, beta subunit
Length = 204
Score = 53.9 bits (128), Expect = 9e-08
Identities = 41/150 (27%), Positives = 72/150 (47%), Gaps = 2/150 (1%)
Query: 67 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 126
+VAAD+ A + + KI+ ++ + L +G D + + L++ N
Sbjct: 14 IVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGI 73
Query: 127 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGNRFSVGS 184
++ A+ + + R SV ++AG+D E+G LYY+D K ++ + G
Sbjct: 74 PLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGY 133
Query: 185 GSPYAYGVLDSGYKYDMSVEEASELARRAI 214
GS ++ +D Y+ DMSVEEA EL + I
Sbjct: 134 GSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163
>At1g79210 unknown protein
Length = 235
Score = 52.8 bits (125), Expect = 2e-07
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 22/244 (9%)
Query: 29 SFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 88
SF L + V+ + G T+L GV++A + + + SV+KI
Sbjct: 7 SFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLP-SILVDEASVQKI 65
Query: 89 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 148
+ P + +G D + R + + K I VT + A ++ + G
Sbjct: 66 QHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
Query: 149 ----LSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVE 204
V ++AG+D+ GP LY VD G ++G A L+ Y DM ++
Sbjct: 126 GVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELD 185
Query: 205 EASELARRAIYHATFRDGASGGVASV-YYVGPTGWKKLSGDDVGELHYHYNPVTPSTVEQ 263
+A A T ++G G ++S +G G K+ + +TP+ ++
Sbjct: 186 DAIHTA-----ILTLKEGFEGEISSKNIEIGKIGTDKV-----------FRVLTPAEIDD 229
Query: 264 EMVE 267
+ E
Sbjct: 230 YLAE 233
>At1g16470 20S proteasome subunit PAB1
Length = 235
Score = 52.0 bits (123), Expect = 3e-07
Identities = 47/205 (22%), Positives = 81/205 (38%), Gaps = 10/205 (4%)
Query: 29 SFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI 88
SF L + V+ + G T+L GV++A + + + SV+KI
Sbjct: 7 SFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLP-SILVDEASVQKI 65
Query: 89 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMG 148
+ P + +G D + R + + K I VT + A ++ + G
Sbjct: 66 QHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
Query: 149 ----LSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVE 204
V ++AG+D+ GP LY VD G ++G A L+ Y DM ++
Sbjct: 126 GVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELD 185
Query: 205 EASELARRAIYHATFRDGASGGVAS 229
+A A T ++G G ++S
Sbjct: 186 DAIHTA-----ILTLKEGFEGEISS 205
>At3g60820 proteasome component C5
Length = 223
Score = 50.4 bits (119), Expect = 1e-06
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
G T +A + ++AAD+R S G I S+ KI ++ + + +G AD + + L
Sbjct: 15 GGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVL 74
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPG-LYYVDSEG 172
+ +++ + +++S ++LL+N LY R ++ G DE G G ++ D+ G
Sbjct: 75 KSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVG 134
Query: 173 GRLKGNRFSVGSGSPYAYGVLDSGYK-------------YDMSVEEASELARRAIYHATF 219
+ + GSGS LD+ K +S EA +L + AT
Sbjct: 135 SYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATE 194
Query: 220 RDGASGGVASVYYVGPTGWK 239
RD +G + + G K
Sbjct: 195 RDIYTGDKLEIMILKADGIK 214
>At3g22110 20S proteasome subunit PAC1
Length = 250
Score = 47.8 bits (112), Expect = 6e-06
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 56 TTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGI 115
+ + + K+GV++ + + + +S S +K+ +I+ ++ +AG +D +
Sbjct: 33 SAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARV 92
Query: 116 KCRLHELANKRRISVTGASKLLANILYSYRGMG----LSVGTMIAGWDET-GPGLYYVDS 170
+ + + + + V + L + Y G V + AGWD+ G LY D
Sbjct: 93 QAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDP 152
Query: 171 EGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAI 214
G +VG+ + A +L YK D + EEA ELA + +
Sbjct: 153 SGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVL 196
>At5g66140 20S proteasome subunit PAD2
Length = 250
Score = 45.8 bits (107), Expect = 2e-05
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 67 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 126
+V A + S S+S +KI+ ++ ++ AG AD + I+C+ H L +
Sbjct: 42 VVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLED 101
Query: 127 RISVTGASKLLANILYSYRGMG----LSVGTMIAGWDETG--PGLYYVDSEGGRLKGNRF 180
++V ++ +A + Y G + T+I G+D P LY D G
Sbjct: 102 PVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKAN 161
Query: 181 SVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVA 228
+ G S L+ YK + S +E +LA RA+ G + VA
Sbjct: 162 ATGRNSNSIREFLEKNYK-ESSGQETIKLAIRALLEVVESGGKNIEVA 208
>At3g51260 multicatalytic endopeptidase complex alpha chain
Length = 250
Score = 43.9 bits (102), Expect = 9e-05
Identities = 41/168 (24%), Positives = 71/168 (41%), Gaps = 7/168 (4%)
Query: 67 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 126
+V A + S S+S +KI+ ++ ++ AG AD + I+C+ H L +
Sbjct: 42 VVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLED 101
Query: 127 RISVTGASKLLANILYSYRGMG----LSVGTMIAGWDETG--PGLYYVDSEGGRLKGNRF 180
++V ++ +A + Y G + T+I G+D P LY D G
Sbjct: 102 PVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKAN 161
Query: 181 SVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVA 228
+ G S L+ YK + + +E +LA RA+ G + VA
Sbjct: 162 ATGRNSNSIREFLEKNYK-ESAGQETVKLAIRALLEVVESGGKNIEVA 208
>At1g56450 putative protein (At1g56450)
Length = 246
Score = 38.5 bits (88), Expect = 0.004
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GT+ +A +K+GV++A+D S G + ++++++ I + L +G +D Q R L
Sbjct: 31 GTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYL 90
Query: 114 G-IKCRLHELANKRRISVTGASKLLANILYSYRGMGLSV-GTMIAGWDETGPG-LYYVDS 170
+ + + + L ++Y+ R + T++ G + G L V
Sbjct: 91 DELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVSM 150
Query: 171 EGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
G + + + G G+ A +L + D+S E+ +L + + +RD
Sbjct: 151 IGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRD 201
>At4g15160 cell wall protein like
Length = 428
Score = 34.3 bits (77), Expect = 0.073
Identities = 27/101 (26%), Positives = 42/101 (40%), Gaps = 7/101 (6%)
Query: 121 ELANKRRISVTGASKLLANILYSYRGMGLS------VGTMIAGWDET-GPGLYYVDSEGG 173
E K + + G K+ + +L + M V +AGWD G LY D G
Sbjct: 318 EFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHVACAVAGWDRNHGFQLYMSDPSGN 377
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAI 214
+VG+ + A +L YK D + EE +LA + +
Sbjct: 378 YGGWQAAAVGANNQAAQSILKQDYKDDATREEVVQLAIKVL 418
Score = 28.9 bits (63), Expect = 3.1
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 33 PNSNDFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEIN 92
P + + F++ +V P L F+ K+GV++ + + + +S S++K+ +I+
Sbjct: 298 PEEDSVNKFLQLLAMLVLP------LEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKID 351
Query: 93 PYMLGTMAGGAADCQFWHRNLGIK 116
++ +AG W RN G +
Sbjct: 352 DHVACAVAG-------WDRNHGFQ 368
>At1g47250 20S proteasome subunit PAF2
Length = 277
Score = 33.5 bits (75), Expect = 0.12
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 42 VKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAG 101
V+ ++ VK +G+ + + V++A ++A +SS +KI +++ ++ +AG
Sbjct: 22 VEYAMEAVK--QGSAAIGLRSRSHVVLACVNKAQ--SELSSHQ-RKIFKVDDHIGVAIAG 76
Query: 102 GAADCQFWHRNLGIKCRLHELANKR-----RISVTGASKLLANILYSYRGMGLSVGTMIA 156
AD + R + + H + R+ V A K S++ VG ++
Sbjct: 77 LTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWK-RPYGVGLLVG 135
Query: 157 GWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASE 208
G DE+G LYY G + F++GS S A L+ ++ S +E+S+
Sbjct: 136 GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFE---SFQESSK 184
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,083,840
Number of Sequences: 26719
Number of extensions: 256992
Number of successful extensions: 604
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 571
Number of HSP's gapped (non-prelim): 28
length of query: 271
length of database: 11,318,596
effective HSP length: 98
effective length of query: 173
effective length of database: 8,700,134
effective search space: 1505123182
effective search space used: 1505123182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC141863.8