BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.5 + phase: 0
(250 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60490 fasciclin-like arabinogalactan protein FLA12 226 1e-59
At5g03170 fasciclin-like arabinogalactan protein FLA11 213 1e-55
At2g20520 fasciclin-like arabinogalactan-protein 6 (Fla6) 168 2e-42
At5g44130 predicted GPI-anchored protein 164 5e-41
At1g03870 predicted GPI-anchored protein 155 2e-38
At2g04780 GPI-anchored protein (Fla7) 105 2e-23
At5g55730 GPI-anchored protein (Fla1) 95 4e-20
At4g12730 fasciclin-like arabinogalactan protein FLA2 93 1e-19
At3g46550 predicted GPI-anchored protein 82 4e-16
At2g45470 GPI-anchored protein (Fla8) 81 5e-16
At3g60900 GPI-anchored protein (Fla10) 78 5e-15
At2g35860 unknown protein 44 8e-05
At3g11700 unknown protein 43 1e-04
At5g06390 unknown protein 41 7e-04
At3g52370 unknown protein 40 0.001
At2g24450 predicted GPI-anchored protein 36 0.017
At1g55330 arabinogalactan-protein AGP21 34 0.084
At1g22710 putative sucrose transport protein, SUC2 32 0.25
At5g40940 unknown protein 32 0.32
At2g22100 putative RNA-binding protein 31 0.71
>At5g60490 fasciclin-like arabinogalactan protein FLA12
Length = 249
Score = 226 bits (575), Expect = 1e-59
Identities = 128/243 (52%), Positives = 172/243 (70%), Gaps = 12/243 (4%)
Query: 9 LSFTLLLIVFFSSTTT---LAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQV 65
L FT+LL++ TTT L+Q SPA AP+ PT++ +IL+KAG FT IRLL++T V
Sbjct: 8 LLFTVLLLL----TTTPGILSQPSPAVAPAPP-GPTNVTKILEKAGQFTVFIRLLKSTGV 62
Query: 66 STQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFD 125
+ Q+ QL NS+ G+T+FAP+D+SF+ LK G LNSL+DEQ+ +LIQFH++P++VS SNF
Sbjct: 63 ANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQ 122
Query: 126 TLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
T+SNP+RTQAGD LNVT+SGN VN+T+G+ N TV G VY+D QLAVYQVDKVLL
Sbjct: 123 TISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLL 182
Query: 185 PRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATII 244
P+ F +PPAPAPAP +K SKKK DSD + DD + R + V AV+ +
Sbjct: 183 PQQVFDPRPPAPAPAPSVSK-SKKKKDDSDS--SSDDSPADASFALRNVGSVCDAVSFCV 239
Query: 245 VAI 247
+++
Sbjct: 240 MSV 242
>At5g03170 fasciclin-like arabinogalactan protein FLA11
Length = 246
Score = 213 bits (541), Expect = 1e-55
Identities = 121/214 (56%), Positives = 151/214 (70%), Gaps = 7/214 (3%)
Query: 15 LIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQL- 73
L +FF T ++PAP PS PT+I IL+KAG FT IRLL++TQ S QIN+QL
Sbjct: 12 LFIFFLVIATTYGQAPAPGPS---GPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 68
Query: 74 LNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRT 133
+S+ GLT+FAP DN+F+SLK G LNSLSD+QK +L+QFH+LPT ++M F T+SNP+RT
Sbjct: 69 SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 128
Query: 134 QAGDDPY-RLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAK 192
QAGD + LN+TSSGNQVN+TTG+V+ TV +VY+D QLAVYQVD+VLLP F
Sbjct: 129 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GS 187
Query: 193 PPAPAPAPEKTKS-SKKKSSDSDGGVAGDDDSGA 225
APAPAPEK S SK +S D G D S A
Sbjct: 188 SVAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDA 221
>At2g20520 fasciclin-like arabinogalactan-protein 6 (Fla6)
Length = 247
Score = 168 bits (426), Expect = 2e-42
Identities = 103/249 (41%), Positives = 149/249 (59%), Gaps = 11/249 (4%)
Query: 4 MKHPFLSFTLLLIVFFSSTTTLAQKSP-APAPSTDTAPTDIIRILKKAGGFTTLIRLLQT 62
M S+ +LLI F T Q P APAP+T+ +P ++ IL+ FTTLI+LL T
Sbjct: 1 MSSSLFSYVVLLIFLF--TIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNT 58
Query: 63 TQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMS 122
TQV Q++ QL +S+ G+T+FAP DN+F+ LKPG LNSL+ +Q+ +L+ +H++P + S+S
Sbjct: 59 TQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLS 118
Query: 123 NFDTLSNPVRTQA-GDDPYRLGLNVT--SSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQV 179
+ SNPVRTQA G D GLN T + NQVN++TG+V + + LAVY V
Sbjct: 119 DLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVV 178
Query: 180 DKVLLPRDFFVAK-PPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPV 238
D VLLP + F K P APAP+ + S SSD+D A D+ A + +R + + V
Sbjct: 179 DSVLLPEELFGTKTTPTGAPAPKSSTS----SSDADSPAADDEHKSAGSSVKRTSLGIVV 234
Query: 239 AVATIIVAI 247
+ A ++
Sbjct: 235 SFALFCCSV 243
>At5g44130 predicted GPI-anchored protein
Length = 247
Score = 164 bits (414), Expect = 5e-41
Identities = 98/230 (42%), Positives = 137/230 (58%), Gaps = 17/230 (7%)
Query: 9 LSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQ 68
L LL VF S+ T + +PAP P+ P +I IL+K G F TLIRLL TTQ+ Q
Sbjct: 6 LLLLLLTAVFLSTEITAQRAAPAPGPA---GPINITAILEKGGQFVTLIRLLNTTQIGNQ 62
Query: 69 INSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLS 128
IN Q+ +S+ G+T+ AP DN+F +LKPG LN LS + + KLI +H+ P F ++ + ++S
Sbjct: 63 INIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVS 122
Query: 129 NPVRTQAG--DDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
NPVRTQA D GLN T GNQVN++TG+V + ++ + LAVY VD VLLP
Sbjct: 123 NPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPE 182
Query: 187 DFFVAKPPAPAPAPEKTK---------SSKKKSSDSDGGVAGDDDSGAVN 227
+ F + +P P K+K SSKK ++ S+ +G SG +N
Sbjct: 183 EMFGERKISPMAPPPKSKSPDVSDDSESSKKAAAPSESEKSG---SGEMN 229
>At1g03870 predicted GPI-anchored protein
Length = 247
Score = 155 bits (392), Expect = 2e-38
Identities = 92/222 (41%), Positives = 130/222 (58%), Gaps = 13/222 (5%)
Query: 13 LLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQ 72
L+ V ++ T +PAP P+ P ++ IL+K G FTT I LL TQV +Q+N Q
Sbjct: 13 LIAAVLLATKATAQPAAPAPEPA---GPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQ 69
Query: 73 LLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVR 132
+ +S+ G+T+FAP DN+F +LKPG LN LS + + KLI +H+ P + SM + ++SNPVR
Sbjct: 70 VNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVR 129
Query: 133 TQA-GDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFF-- 189
TQA G D GLN T NQ+N++TG V + ++ LAVY VD VLLP + F
Sbjct: 130 TQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGE 189
Query: 190 -VAKPPAPAP------APEKTKSSKKKSSDSDGGVAGDDDSG 224
P APAP + + S+KK +S SD +G+ G
Sbjct: 190 HKLSPIAPAPKSKSGGVTDDSGSTKKAASPSDKSGSGEKKVG 231
>At2g04780 GPI-anchored protein (Fla7)
Length = 254
Score = 105 bits (263), Expect = 2e-23
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 1 MVMMKHPFLSFTLLLIVFFSSTTTLAQKSPA----PAPSTDTAPTDIIRILKKAGGFTTL 56
M M+ + LIV +S T + +P PAP+ ++ +L AG F T
Sbjct: 1 MAKMQLSIFIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTF 60
Query: 57 IRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLP 116
+ L +T V +Q N+ G+T+F P D++F + K L++L+ +Q +L+ FH LP
Sbjct: 61 LDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALP 120
Query: 117 TFVSMSNFDTL--SNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQL 174
+ S+S F L S PV T AG + L T V + + V +V++ +
Sbjct: 121 HYYSLSEFKNLSQSGPVSTFAGG---QYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPV 177
Query: 175 AVYQVDKVLLPRDFF-VAKPPAPAPAPEKTKSSKKKS---SDSDGGVAGDDDSGAVNVKQ 230
AVYQV++VLLP F PP PAPAP S+ S +DS+G A S N Q
Sbjct: 178 AVYQVNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADSEG--ASSPKSSHKNSGQ 235
Query: 231 RRLMLVPVA-VATIIVAIY 248
+L+L P++ V + +VA++
Sbjct: 236 -KLLLAPISMVISGLVALF 253
>At5g55730 GPI-anchored protein (Fla1)
Length = 424
Score = 94.7 bits (234), Expect = 4e-20
Identities = 70/219 (31%), Positives = 103/219 (46%), Gaps = 27/219 (12%)
Query: 24 TLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLF 83
T A +PAPA T + A G L T +++ + L GG+T+F
Sbjct: 174 TAAAPTPAPAEMNLTG-------IMSAHGCKVFAETLLTNPGASKTYQESLE--GGMTVF 224
Query: 84 APNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLG 143
P D++ P + N L+ +K + F +PT+ SM+ + + P+ T A D +
Sbjct: 225 CPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFE 283
Query: 144 LNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA---KPPAPAPAP 200
L V + G +V + T I V + T+ + LA+Y DKVLLP++ F A + PAPAPAP
Sbjct: 284 LTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELFKASAVEAPAPAPAP 343
Query: 201 E-------------KTKSSKKKSSDS-DGGVAGDDDSGA 225
E K K KKK++ S D GD DS A
Sbjct: 344 EDGDVADSPKAAKGKAKGKKKKAAPSPDNDPFGDSDSPA 382
>At4g12730 fasciclin-like arabinogalactan protein FLA2
Length = 403
Score = 93.2 bits (230), Expect = 1e-19
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 20/242 (8%)
Query: 21 STTTLAQKSPAPAPSTDTA-PTDII--RILKKAGGFTTLIRLLQTTQVSTQINSQLLNSN 77
S ++Q +P TA P+D+I IL+K G +L++T + +
Sbjct: 166 SVLHISQVLTSPEAEAPTASPSDLILTTILEKQG-CKAFSDILKSTGADKTFQDTV---D 221
Query: 78 GGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGD 137
GGLT+F P+D++ P F SLS K L+ +H +P + S+ + + V T A +
Sbjct: 222 GGLTVFCPSDSAVGKFMPKF-KSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATE 280
Query: 138 DPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA-KPPAP 196
+ V + G V + T +V V GT+ L VY++DKVLLPR+ + A K AP
Sbjct: 281 GNNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAP 340
Query: 197 APAPEKTKSSKKKSSDSDGGVA----------GDDDSGAVNVKQRRLMLVPVAVATIIVA 246
AP K K K +D+DG A DD +GAV+ R V A+ +
Sbjct: 341 APKSSK-KKPKNAEADADGPSADAPSDDDVEVADDKNGAVSAMITRTSNVVTAIVGLCFG 399
Query: 247 IY 248
++
Sbjct: 400 VW 401
Score = 28.9 bits (63), Expect = 2.7
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 42 DIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSL 101
+I RIL K F+T L T ++ +IN + +T+ A ++++ SS+ N
Sbjct: 28 NITRILAKDPDFSTFNHYLSATHLADEINRRQT-----ITVLAVDNSAMSSI---LSNGY 79
Query: 102 SDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVN 161
S Q ++ H+L + +++ + A ++ S T+G +N
Sbjct: 80 SLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTA---------SMFQSTGSATGTSGYIN 130
Query: 162 VT 163
+T
Sbjct: 131 IT 132
>At3g46550 predicted GPI-anchored protein
Length = 420
Score = 81.6 bits (200), Expect = 4e-16
Identities = 60/209 (28%), Positives = 108/209 (50%), Gaps = 14/209 (6%)
Query: 15 LIVFFSSTTTLAQKSPAPAPSTDTAPT----DIIRILKKAGGFTTLIRLLQTTQVSTQIN 70
LIV T ++ P ST +P ++ +IL F + LL + V T+
Sbjct: 176 LIVPTGIDITASETLTPPPTSTSLSPPPAGINLTQILINGHNFNVALSLLVASGVITEFE 235
Query: 71 SQLLNSNGGLTLFAPNDNSFSSLKPGF-LNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSN 129
+ G+T+F P D++FS L L SL EQK +++FH+L ++ ++ + ++++N
Sbjct: 236 ND--ERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITN 293
Query: 130 PVRTQAGDDPYRLG---LNVTS-SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
PV+ + G LN++ +G+ V + +G+V V T + + ++V+ V KVLLP
Sbjct: 294 PVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLP 353
Query: 186 RDFF--VAKPPAPAPAPEKTKSSKKKSSD 212
++ F +P A AP P++ S + SS+
Sbjct: 354 KELFPKSGQPVATAP-PQEISLSPESSSE 381
Score = 34.3 bits (77), Expect = 0.065
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 16/202 (7%)
Query: 16 IVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLN 75
++ S T LA S+ A ++ +L ++ LL ++ ++ + L+
Sbjct: 4 VISISHFTLLALPYLLLLLSSTAAAINVTAVLSSFPNLSSFSNLLVSSGIAAE-----LS 58
Query: 76 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTL---SNPVR 132
LTL A ++ FSS L L++FH+L F+S S+ + + V
Sbjct: 59 GRNSLTLLAVPNSQFSSASLDLTRRLPPSALADLLRFHVLLQFLSDSDLRRIPPSGSAVT 118
Query: 133 T---QAGDDPYRLG-LNVT---SSGNQVNMTTGIVNVTVGGTVYT-DHQLAVYQVDKVLL 184
T +G + G +NVT +SG+ + NVTV + T + V VD +++
Sbjct: 119 TLYEASGRTFFGSGSVNVTRDPASGSVTIGSPATKNVTVLKLLETKPPNITVLTVDSLIV 178
Query: 185 PRDFFVAKPPAPAPAPEKTKSS 206
P + P P T S
Sbjct: 179 PTGIDITASETLTPPPTSTSLS 200
>At2g45470 GPI-anchored protein (Fla8)
Length = 420
Score = 81.3 bits (199), Expect = 5e-16
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 31 APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSF 90
APAPS + +I +L+KAG T LL ++ V S + GLT+FAP+D +F
Sbjct: 180 APAPSASLS--NITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAF 233
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
+ L L+ + L+++H L + + T N + T A + + L ++SG
Sbjct: 234 KAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSG 293
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFF-VAKPPAPAPAPEKTKSSKKK 209
++V + TG+ + TV + ++ VD VLLP + F +K P+PAPAPE +
Sbjct: 294 DEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAPTPS 353
Query: 210 SSDSDGGVA 218
+D+ A
Sbjct: 354 PADAPSPTA 362
>At3g60900 GPI-anchored protein (Fla10)
Length = 422
Score = 77.8 bits (190), Expect = 5e-15
Identities = 56/195 (28%), Positives = 96/195 (48%), Gaps = 6/195 (3%)
Query: 31 APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSF 90
APAPS+ ++I +L+KAG T LL ++ V S + GLT+FAP+D +F
Sbjct: 180 APAPSS-AGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTV---EKGLTVFAPSDEAF 234
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
+ L +L+ + L+++H L + + T + + T A + + L ++SG
Sbjct: 235 KARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSG 294
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKS 210
++V + TG+ + TV + + ++ VD VLLP + F K +PAPAPE +
Sbjct: 295 DEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELF-GKSSSPAPAPEPVSAPTPTP 353
Query: 211 SDSDGGVAGDDDSGA 225
+ S V + A
Sbjct: 354 AKSPSPVEAPSPTAA 368
>At2g35860 unknown protein
Length = 445
Score = 43.9 bits (102), Expect = 8e-05
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 29 SPAPAPST---------DTAPTDIIRILKKAGGFTTLIRLL-QTTQVSTQINSQLLNSNG 78
+PAPAP D D I L GG+ + +L T ++T++ +L++
Sbjct: 237 APAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMG-RLVSEGY 295
Query: 79 GLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFV---SMSNFDTLSNPVRTQA 135
LT+ APND + + L L+ ++ ++ +H++P + SM N V+ +
Sbjct: 296 VLTVLAPNDEAMAKLTTDQLSEPGAPEQ--IMYYHIIPEYQTEESMYNAVRRFGKVKYDS 353
Query: 136 GDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPA 195
P+++ + G + +YTD +++V +D VL P++ A
Sbjct: 354 LRFPHKVLAQEADGSVKFGHGDGSAYL-FDPDIYTDGRISVQGIDGVLFPKEETPATEIK 412
Query: 196 PAPAPEKTKSSKKK 209
PA AP K SK +
Sbjct: 413 PA-APVVKKVSKSR 425
Score = 38.9 bits (89), Expect = 0.003
Identities = 39/178 (21%), Positives = 84/178 (46%), Gaps = 17/178 (9%)
Query: 14 LLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQL 73
LL++F +++ A P P + + ++ +L +T L L++ + + +
Sbjct: 11 LLLLFLTTSIATALPDNKPVPGQINSNSVLVALLDSH--YTELAELVEKALLLQTLEEAV 68
Query: 74 LNSNGGLTLFAP-NDNSFSSLKPGFLNSLSDEQKNK----LIQFHLLPTFVSMSNFDTLS 128
N +T+FAP ND +L P F + L + + K L+ FH+LP ++ + +LS
Sbjct: 69 GKHN--ITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLS 126
Query: 129 NPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
+ RT + D L++T N + + + + + + D ++ ++++L+PR
Sbjct: 127 HHHRTLSNDH-----LHLTVDVNTLKVDSAEI-IRPDDVIRPDG--IIHGIERLLIPR 176
>At3g11700 unknown protein
Length = 462
Score = 43.1 bits (100), Expect = 1e-04
Identities = 46/185 (24%), Positives = 82/185 (43%), Gaps = 22/185 (11%)
Query: 29 SPAPAPST---------DTAPTDIIRILKKAGGFTTLIRLL-QTTQVSTQINSQLLNSNG 78
+PAPAP D D I L GG+ + +L T ++T++ +L++
Sbjct: 251 APAPAPGPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMG-RLVSEGY 309
Query: 79 GLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLP---TFVSMSNFDTLSNPVRTQA 135
LT+ APND + L L+ + +++ +H++P T SM N V+ +
Sbjct: 310 VLTVLAPNDEAMGKLTTDQLSEPGAPE--QIMYYHIIPEYQTEESMYNSVRRFGKVKYET 367
Query: 136 GDDPYRLGLNVTSSGNQVNMTTGIVNVTV-GGTVYTDHQLAVYQVDKVLLP---RDFFVA 191
P+++G + V +G + + +YTD +++V +D VL P + V
Sbjct: 368 LRFPHKVG--AKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQGIDGVLFPEEKEEETVK 425
Query: 192 KPPAP 196
KP P
Sbjct: 426 KPTGP 430
>At5g06390 unknown protein
Length = 458
Score = 40.8 bits (94), Expect = 7e-04
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 39/183 (21%)
Query: 29 SPAPAPST---------DTAPTDIIRILKKAGGFTTLIRLL-QTTQVSTQINSQLLNSNG 78
+PAPAP + D I L GG+ + +L T ++T++ +L++
Sbjct: 248 APAPAPGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMG-RLVSEGY 306
Query: 79 GLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLP---TFVSMSN---------FDT 126
LT+ APND + + L L+ + +++ +H++P T SM N FDT
Sbjct: 307 VLTVLAPNDEAMAKLTTDQLSEPGAPE--QIVYYHIIPEYQTEESMYNSVRRFGKVKFDT 364
Query: 127 LSNP--VRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
L P V + D + G S+ +YTD +++V +D VL
Sbjct: 365 LRFPHKVAAKEADGSVKFGDGEKSA------------YLFDPDIYTDGRISVQGIDGVLF 412
Query: 185 PRD 187
P++
Sbjct: 413 PQE 415
>At3g52370 unknown protein
Length = 436
Score = 40.4 bits (93), Expect = 0.001
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 29 SPAPAPST---------DTAPTDIIRILKKAGGFTTLIRLL-QTTQVSTQINSQLLNSNG 78
+PAPAP + D I L GG+ + +L T ++T++ +L++
Sbjct: 229 APAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMG-RLVSEGY 287
Query: 79 GLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLP---TFVSMSNFDTLSNPVRTQA 135
LT+ APND + + L L+ + +++ +H++P T SM N +R +
Sbjct: 288 VLTVLAPNDEAMAKLTTDQLSEPGAPE--QIMYYHIIPEYQTEESMYNSVRRFGKIRYDS 345
Query: 136 GDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPA 195
P+++ + G + +YTD +++V +D VL P + +
Sbjct: 346 LRFPHKVEAQEADGSVKFGHGDGSAYL-FDPDIYTDGRISVQGIDGVLFPEEKTPVEKKT 404
Query: 196 PAPAPEKTKSSKK 208
P +K ++
Sbjct: 405 GVPVVKKAPKPRR 417
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 9 LSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQ 68
L F LLL + S TT L K P + ++ + + +T L L++ +
Sbjct: 7 LLFFLLLTI--SITTALPDK-----PGSGQINSNSVLVALLDSHYTELAELVEKALLLQT 59
Query: 69 INSQLLNSNGGLTLFAP-NDNSFSSLKPGFLNSLSDEQKNK----LIQFHLLPTFVSMSN 123
+ + N +T+FAP ND +L P F + L + K L+ FH+LP ++
Sbjct: 60 LEEAVGQHN--ITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITSPQ 117
Query: 124 FDTLSNPVRTQAGD 137
F + RT + D
Sbjct: 118 FSSAVVSHRTLSND 131
>At2g24450 predicted GPI-anchored protein
Length = 280
Score = 36.2 bits (82), Expect = 0.017
Identities = 44/201 (21%), Positives = 81/201 (39%), Gaps = 21/201 (10%)
Query: 33 APSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSS 92
A S+ + +I R+L+K F+T+ LL T++ + ++N +T+ A N+++ S
Sbjct: 17 AVSSIVSAVNITRVLEKYPEFSTMTELLAKTEL-----TPIINKRQTITVLALNNDAIGS 71
Query: 93 LKPGFLNSLSDEQKNKLIQFHLLPTF-----VSMSNFDTLSNPVRTQAGDDPYRLG-LNV 146
+ +E KN L+ +L F ++ TL + G + G LN
Sbjct: 72 IS----GRPEEEVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNC 127
Query: 147 TSSGNQVNMTTGIVNVTVGGTVYT-----DHQLAVYQVD-KVLLPRDFFVAKPPAPAPAP 200
T S ++ +G+ T + L+V Q+ ++ P K P P P
Sbjct: 128 TKSNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLGSPVKVPPPPPMS 187
Query: 201 EKTKSSKKKSSDSDGGVAGDD 221
S KK + + D+
Sbjct: 188 SPPAPSPKKGAATPAPAPADE 208
>At1g55330 arabinogalactan-protein AGP21
Length = 58
Score = 33.9 bits (76), Expect = 0.084
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 1 MVMMKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTA---PTDIIRILKKAGGF 53
M MK + F +++ V FS+ T ++PAP+P++D A P ++ A GF
Sbjct: 1 MEAMKMKMMVFIMVVAVAFSAATAATVEAPAPSPTSDAAMFVPALFASVVALASGF 56
>At1g22710 putative sucrose transport protein, SUC2
Length = 512
Score = 32.3 bits (72), Expect = 0.25
Identities = 21/63 (33%), Positives = 31/63 (48%)
Query: 8 FLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVST 67
FLS TLLLIV F S + +K P P+ D +++ + G F L R + + T
Sbjct: 227 FLSITLLLIVTFVSLCYVKEKPWTPEPTADGKASNVPFFGEIFGAFKELKRPMWMLLIVT 286
Query: 68 QIN 70
+N
Sbjct: 287 ALN 289
>At5g40940 unknown protein
Length = 424
Score = 32.0 bits (71), Expect = 0.32
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 80 LTLFAPNDNSFSSL-KPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDD 138
LTLFAP+D SFS +P L+ +++ L PT + L N +
Sbjct: 103 LTLFAPSDQSFSKFGQPSLLD----------MKYQLSPTRLPGETLRNLPNGAKIPTLRS 152
Query: 139 PYRLGLNVTSSGNQVNMTTGIVNVTV-GGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPA 197
Y L VT+S ++ T I NV V V+ D + +Y D +FF + P
Sbjct: 153 NY--SLTVTNS-SRFGGKTSINNVVVQDSPVFDDGYVVIYGSD------EFFTS--PTKI 201
Query: 198 PAPEKTKSSKKKSSDSDGGV 217
+ SS ++ S G +
Sbjct: 202 SDDSSSSSSIPSTTSSTGSI 221
>At2g22100 putative RNA-binding protein
Length = 382
Score = 30.8 bits (68), Expect = 0.71
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 192 KPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNV 228
K P+P+P+P+K+K SKKK S DS V V
Sbjct: 68 KSPSPSPSPKKSKESKKKHKRSSDESEEIVDSKPVTV 104
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,433,171
Number of Sequences: 26719
Number of extensions: 237695
Number of successful extensions: 1361
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1278
Number of HSP's gapped (non-prelim): 70
length of query: 250
length of database: 11,318,596
effective HSP length: 97
effective length of query: 153
effective length of database: 8,726,853
effective search space: 1335208509
effective search space used: 1335208509
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC139344.5