BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC134322.23 + phase: 0 
         (150 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g10960 ferredoxin precusor isolog                                  191  1e-49
At1g60950 ferrodoxin precursor                                        191  2e-49
At2g27510 putative ferredoxin                                         143  3e-35
At5g10000 putative protein                                            115  9e-27
At4g14890 ferredoxin                                                   81  2e-16
At1g32550 ferredoxin, putative                                         76  6e-15
At2g47350 unknown protein                                              28  2.4
At1g77630 unknown protein with predicted GPI-anchor                    27  5.4

>At1g10960 ferredoxin precusor isolog
          Length = 148

 Score =  191 bits (486), Expect = 1e-49
 Identities = 100/149 (67%), Positives = 115/149 (77%), Gaps = 3/149 (2%)

Query: 1   MATTPALYGTAVSTSFLRRQPMPVSISTTTKA-FPSGFGLKSKTGKRGDLAVAMATYKVK 59
           MA+T AL    VSTSFLRRQ  P+S+ +   A   S FGLKS T  RG    AMATYKVK
Sbjct: 1   MAST-ALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTA-RGGRVTAMATYKVK 58

Query: 60  LVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSFLDD 119
            +TPEG QE +C  DVY+LD AEE G+DLPYSCRAGSCSSCAGKV +G++DQSD SFLDD
Sbjct: 59  FITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD 118

Query: 120 DQIEEGWVLTCVAYPTSDVTIETHKEEEL 148
           +Q+ EG+VLTCVAYPTSDV IETHKEE +
Sbjct: 119 EQMSEGYVLTCVAYPTSDVVIETHKEEAI 147


>At1g60950 ferrodoxin precursor
          Length = 148

 Score =  191 bits (484), Expect = 2e-49
 Identities = 100/149 (67%), Positives = 114/149 (76%), Gaps = 3/149 (2%)

Query: 1   MATTPALYGTAVSTSFLRRQPMPVSISTTTKA-FPSGFGLKSKTGKRGDLAVAMATYKVK 59
           MA+T AL    V TSF+RR P P+S+ +   A   S FGLKS T  RG    AMATYKVK
Sbjct: 1   MAST-ALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTA-RGGRVTAMATYKVK 58

Query: 60  LVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSFLDD 119
            +TPEG  E +C  DVY+LD AEE GIDLPYSCRAGSCSSCAGKV +G+VDQSD SFLDD
Sbjct: 59  FITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDD 118

Query: 120 DQIEEGWVLTCVAYPTSDVTIETHKEEEL 148
           +QI EG+VLTC AYPTSDVTIETHKEE++
Sbjct: 119 EQIGEGFVLTCAAYPTSDVTIETHKEEDI 147


>At2g27510 putative ferredoxin
          Length = 155

 Score =  143 bits (361), Expect = 3e-35
 Identities = 74/146 (50%), Positives = 97/146 (65%), Gaps = 4/146 (2%)

Query: 4   TPALYGTAVSTSFLRRQPMPVSISTTTKAFPSGFGLKSKTGKRGDLAVAMATYKVKLVTP 63
           T A+  +  +   +  +   +S+ +T +   S FGLK      G  A   A YKVKL+ P
Sbjct: 12  TKAVLRSQTTNKLITNKSYNLSVGSTKRVSRS-FGLKCSANSGG--ATMSAVYKVKLLGP 68

Query: 64  EGTQ-EFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSFLDDDQI 122
           +G + EF+   D YILD AEE G+DLPYSCRAG+CS+CAG++ +G VDQSDGSFL+D  +
Sbjct: 69  DGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHL 128

Query: 123 EEGWVLTCVAYPTSDVTIETHKEEEL 148
           E+G+VLTCVAYP SD  I THKE EL
Sbjct: 129 EKGYVLTCVAYPQSDCVIHTHKETEL 154


>At5g10000 putative protein
          Length = 148

 Score =  115 bits (288), Expect = 9e-27
 Identities = 55/113 (48%), Positives = 79/113 (69%), Gaps = 2/113 (1%)

Query: 37  FGLKSKTGKRGDLAVAMATYKVKLVTPEGT-QEFDCPSDVYILDHAEEVGIDLPYSCRAG 95
           FGL S  G  G +  A  + KVKL++PEG  QE +   D  IL+ AE  G++LPYSCR+G
Sbjct: 36  FGLSSSRGNFGKV-FAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSG 94

Query: 96  SCSSCAGKVAAGAVDQSDGSFLDDDQIEEGWVLTCVAYPTSDVTIETHKEEEL 148
           +C +C GK+ +G VDQS GSFL+++QI++G++LTC+A P  D  + THK+ +L
Sbjct: 95  TCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147


>At4g14890 ferredoxin
          Length = 154

 Score = 80.9 bits (198), Expect = 2e-16
 Identities = 45/113 (39%), Positives = 59/113 (51%), Gaps = 4/113 (3%)

Query: 39  LKSKTGKRGDLA---VAMATYKVKLVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAG 95
           L + T +R  L    +    YKV +     T E +   D  IL  A + G+D+PY C  G
Sbjct: 33  LSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLG 92

Query: 96  SCSSCAGKVAAGAVDQSDGSFLDDDQIEEGWVLTCVAYPTSDVTIETHKEEEL 148
            C +C  K+  G VDQS G  L DD +E G+ L C +YPTSD  I+   EEEL
Sbjct: 93  VCMTCPAKLVTGTVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEEL 144


>At1g32550 ferredoxin, putative
          Length = 181

 Score = 76.3 bits (186), Expect = 6e-15
 Identities = 40/108 (37%), Positives = 56/108 (51%)

Query: 41  SKTGKRGDLAVAMATYKVKLVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSC 100
           S    RG L V      V         EF+ P D YIL  AE   I LP++CR G C+SC
Sbjct: 46  STPSDRGSLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSC 105

Query: 101 AGKVAAGAVDQSDGSFLDDDQIEEGWVLTCVAYPTSDVTIETHKEEEL 148
           A +V +G + Q     +  +   +G+ L CV +PTSD+ +ET  E+E+
Sbjct: 106 AVRVKSGELRQPQALGISAELKSQGYALLCVGFPTSDLEVETQDEDEV 153


>At2g47350 unknown protein
          Length = 486

 Score = 27.7 bits (60), Expect = 2.4
 Identities = 14/58 (24%), Positives = 25/58 (42%)

Query: 57  KVKLVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDG 114
           K K V+ + +++ DC  ++      +E+G D        S         + A+D SDG
Sbjct: 272 KKKAVSEQASEDMDCAEEIETASDEKEIGNDNKRESTMTSRQRALASGRSSAIDFSDG 329


>At1g77630 unknown protein with predicted GPI-anchor
          Length = 423

 Score = 26.6 bits (57), Expect = 5.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 60  LVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSS 99
           LV+PE  Q  +  +D+ +LD   ++ I LP +C  G+  S
Sbjct: 128 LVSPEQIQVANSETDLSVLDVGTKLVIPLPCACFNGTDES 167


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.314    0.130    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,450,370
Number of Sequences: 26719
Number of extensions: 137002
Number of successful extensions: 232
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 8
length of query: 150
length of database: 11,318,596
effective HSP length: 90
effective length of query: 60
effective length of database: 8,913,886
effective search space: 534833160
effective search space used: 534833160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)