BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130803.10 - phase: 0
(289 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04760 I-box binding factor-like protein 98 5e-21
At5g58900 I-box binding factor - like protein 96 3e-20
At5g08520 unknown protein 94 9e-20
At5g01200 putative protein 92 3e-19
At2g38090 MYB family transcription factor like protein 91 6e-19
At5g23650 putative protein 91 7e-19
At5g61620 transcriptional activator - like protein 90 1e-18
At1g49010 hypothetical protein 88 5e-18
At3g10580 hypothetical protein 87 1e-17
At3g11280 unknown protein 86 3e-17
At1g70000 unknown protein 84 9e-17
At5g05790 unknown protein 82 3e-16
At5g47390 Myb-related transcription activator-like 82 3e-16
At3g16350 putative MYB family transcription factor 80 1e-15
At1g19000 unknown protein 80 1e-15
At1g74840 MYB family transcription factor like protein 79 3e-15
At4g09450 unknown protein (At4g09450) 77 1e-14
At5g56840 putative protein 76 2e-14
At3g10590 hypothetical protein 72 3e-13
At3g10585 putative protein 59 2e-09
>At5g04760 I-box binding factor-like protein
Length = 215
Score = 98.2 bits (243), Expect = 5e-21
Identities = 48/76 (63%), Positives = 57/76 (74%), Gaps = 3/76 (3%)
Query: 93 ESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVK 152
ES R WTE+EHKLFL GLK++GKG W+ IS+ VVT+TPTQ+ASHAQKYF+ QN
Sbjct: 92 ESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN-- 149
Query: 153 DIEKKEKKRKSIHDTT 168
KKE+KR SIHD T
Sbjct: 150 -SVKKERKRSSIHDIT 164
>At5g58900 I-box binding factor - like protein
Length = 288
Score = 95.5 bits (236), Expect = 3e-20
Identities = 58/129 (44%), Positives = 77/129 (58%), Gaps = 14/129 (10%)
Query: 82 NNLIQAESVPEESHAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIAS 140
N QA PE +KG WTE+EHKLFL GLKK+GKG W++IS+ FV+T+TPTQ+AS
Sbjct: 124 NKRSQAGRSPELER--KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVAS 181
Query: 141 HAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGM 200
HAQKYFI Q K+K+R SIHD T TV +E+ + + + V+ Q
Sbjct: 182 HAQKYFIRQLSGG---KDKRRASIHDIT--------TVNLEEEASLETNKSSIVVGDQRS 230
Query: 201 QQTQTQQNE 209
+ T N+
Sbjct: 231 RLTAFPWNQ 239
>At5g08520 unknown protein
Length = 298
Score = 94.0 bits (232), Expect = 9e-20
Identities = 46/72 (63%), Positives = 56/72 (76%), Gaps = 4/72 (5%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTEDEH+LFL GL K+GKG W+ IS+ FVVT+TPTQ+ASHAQKYFI N +
Sbjct: 115 RKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN--- 171
Query: 157 KEKKRKSIHDTT 168
K+++R SIHD T
Sbjct: 172 KDRRRSSIHDIT 183
>At5g01200 putative protein
Length = 267
Score = 92.0 bits (227), Expect = 3e-19
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTEDEH FL GLKK+GKG W++I+K FV T+TPTQ+ASHAQKYF+ Q + K+K+R
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLT---DGKDKRR 204
Query: 162 KSIHD-TTLNKND 173
SIHD TT+N D
Sbjct: 205 SSIHDITTVNIPD 217
>At2g38090 MYB family transcription factor like protein
Length = 298
Score = 91.3 bits (225), Expect = 6e-19
Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Query: 95 HAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKD 153
H +KG WTE+EH+ FL GLKK+GKG W++I++ FV T+TPTQ+ASHAQKYFI Q
Sbjct: 135 HERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGG 194
Query: 154 IEKKEKKRKSIHD-TTLNKNDT 174
K+K+R SIHD TT+N D+
Sbjct: 195 ---KDKRRSSIHDITTVNIPDS 213
>At5g23650 putative protein
Length = 337
Score = 90.9 bits (224), Expect = 7e-19
Identities = 67/188 (35%), Positives = 100/188 (52%), Gaps = 25/188 (13%)
Query: 70 NDNSVETLNSNENNLIQAESVPEESHAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKE 128
ND E+ + ++ L Q R+G W EH+ FL GLKK+GKG W+ IS+
Sbjct: 98 NDRKYESKHKGKSKLKQKR---------RRGVPWKPFEHRQFLHGLKKYGKGDWRSISRH 148
Query: 129 FVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPS 188
VVT+T TQ+ASHAQKYF H N +D K++KR SIHD T+ +N ++ T +QR
Sbjct: 149 CVVTRTSTQVASHAQKYFAHINSED---KKRKRPSIHDITIAENKSIST---KQR----P 198
Query: 189 VELQSVIPPQGMQQTQTQQNEISPMLCL-LPISSTIPSVQQQNELTPVVTAPMEQQ--HE 245
+ Q I G + TQ N+ + L +PI T ++ + T V++ P + ++
Sbjct: 199 ITWQK-INNNGATASNTQANQTTLQPSLDIPIYGTHNNIWNA-QATQVISQPSQNHPTYD 256
Query: 246 TPAILNNK 253
P I N +
Sbjct: 257 APIIWNTQ 264
>At5g61620 transcriptional activator - like protein
Length = 317
Score = 90.1 bits (222), Expect = 1e-18
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 94 SHAPRKGH-WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVK 152
+H +KG WTE+EH+ FL GL K GKG W+ I+K FV T+TPTQ+ASHAQKYFI NV
Sbjct: 101 AHEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVN 160
Query: 153 DIEKKEKKRKSIHDTTL------NKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQ 206
D K K+R S+ D +L +N + + I ++ Q V+ QG QT+
Sbjct: 161 D---KRKRRASLFDISLEDQKEKERNSQDASTKTPPKQPITGIQ-QPVV--QGHTQTEIS 214
Query: 207 QNEISPMLCLLPISSTIP 224
+ + +PI IP
Sbjct: 215 NRFQNLSMEYMPIYQPIP 232
>At1g49010 hypothetical protein
Length = 441
Score = 88.2 bits (217), Expect = 5e-18
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTE+EH+LFL GL K GKG W+ IS+ FV+++TPTQ+ASHAQKYFI N +
Sbjct: 131 RKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN--- 187
Query: 157 KEKKRKSIHDTT 168
++++R SIHD T
Sbjct: 188 RDRRRSSIHDIT 199
>At3g10580 hypothetical protein
Length = 287
Score = 87.0 bits (214), Expect = 1e-17
Identities = 53/133 (39%), Positives = 75/133 (55%), Gaps = 16/133 (12%)
Query: 89 SVPEESHAPRKGH-------WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASH 141
S+PE + + +G W+ +EH+LFL GL K+GKG WK IS+E V +++P Q+ASH
Sbjct: 77 SLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASH 136
Query: 142 AQKYFIHQNVKDIEKKEKKRKSIHDTTLN--KNDTLVTVAVEQRDEIPSVELQSVIPPQG 199
AQKYF+ Q + K+ KR SIHD TL +N T+ + + P + QS PP
Sbjct: 137 AQKYFLRQ-----KNKKGKRFSIHDMTLGDAENVTVPVSNLNSMGQQPHFDDQS--PPDH 189
Query: 200 MQQTQTQQNEISP 212
Q +Q N P
Sbjct: 190 YQDYFSQSNVTIP 202
>At3g11280 unknown protein
Length = 263
Score = 85.5 bits (210), Expect = 3e-17
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+ FL GL K+GKG W++IS+ FVV+KTPTQ+ASHAQKY+ Q K+K+R
Sbjct: 129 WTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQL---SGAKDKRR 185
Query: 162 KSIHDTTLNK--NDTLVTVAVEQRDEIPSV 189
SIHD T N L + RD +P +
Sbjct: 186 PSIHDITTGNLLNANLNRSFSDHRDILPDL 215
>At1g70000 unknown protein
Length = 261
Score = 84.0 bits (206), Expect = 9e-17
Identities = 56/170 (32%), Positives = 83/170 (47%), Gaps = 32/170 (18%)
Query: 53 TGTNIDESGHAVAILNSNDNSVETLNS------NENNLIQAESVPEESHAPRKGH----- 101
TG N D+ G AI+ E +S + NNL Q + P+ + G+
Sbjct: 25 TGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMNNLSQFDQTPDPNPTDDGGYASDDV 84
Query: 102 ---------------WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 146
WTE+EH+LFL GL K GKG W+ IS+ FV T+TPTQ+ASHAQKYF
Sbjct: 85 VHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 144
Query: 147 IHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIP 196
+ + + + ++R S+ D T D+ + + E+ +EL +P
Sbjct: 145 LR---RTNQNRRRRRSSLFDIT---PDSFIGSSKEENQLQTPLELIRPVP 188
>At5g05790 unknown protein
Length = 277
Score = 82.4 bits (202), Expect = 3e-16
Identities = 44/75 (58%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTE+EH+ FL GL K+GKG W++IS+ FV +KTPTQ+ASHAQKY+ Q
Sbjct: 128 RKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQL---SGA 184
Query: 157 KEKKRKSIHD-TTLN 170
K+K+R SIHD TT+N
Sbjct: 185 KDKRRPSIHDITTVN 199
>At5g47390 Myb-related transcription activator-like
Length = 365
Score = 82.0 bits (201), Expect = 3e-16
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQ-NVKDIEKKEKK 160
WTE+EH++FL GL+K GKG W+ IS+ +V T+TPTQ+ASHAQKYFI Q NV + K+
Sbjct: 98 WTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNV----SRRKR 153
Query: 161 RKSIHDTTLNK-NDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLCLLPI 219
R S+ D ++ D + + + D IP VE + MQ + ++P P
Sbjct: 154 RSSLFDMVPDEVGDIPMDLQEPEEDNIP-VETE-------MQGADSIHQTLAPSSLHAPS 205
Query: 220 SSTIPSVQQQNELTPVVTAPMEQQHETPAILNNKDNENLQTQL 262
I + + P + ++ LQ+QL
Sbjct: 206 ILEIEECESMDSTNSTTGEPTATAAAASSSSRLEETTQLQSQL 248
>At3g16350 putative MYB family transcription factor
Length = 387
Score = 80.1 bits (196), Expect = 1e-15
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 29/139 (20%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+LFL GL+K GKG W+ IS+ +V ++TPTQ+ASHAQKYFI + K+R
Sbjct: 139 WTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHT---SSSRRKRR 195
Query: 162 KSIHDTTLNK--------------NDTLVTVAVEQRDEIPSVELQ-----------SVIP 196
S+ D ++ N + + E++ +PS+EL + P
Sbjct: 196 SSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSYLPSLELSLNNTTEAEEVVATAP 255
Query: 197 PQGMQQTQTQ-QNEISPML 214
Q Q + N +SPML
Sbjct: 256 RQEKSQEAIEPSNGVSPML 274
>At1g19000 unknown protein
Length = 285
Score = 80.1 bits (196), Expect = 1e-15
Identities = 40/81 (49%), Positives = 57/81 (69%), Gaps = 6/81 (7%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHK FL GL+K GKG WK IS+ FV ++TPTQ+ASHAQKYF+ + + + ++R
Sbjct: 104 WTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLN---RRRRR 160
Query: 162 KSIHDTTLNKNDTLVTVAVEQ 182
S+ D T +T+ +A+EQ
Sbjct: 161 SSLFDIT---TETVTEMAMEQ 178
>At1g74840 MYB family transcription factor like protein
Length = 265
Score = 79.0 bits (193), Expect = 3e-15
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHKLFL GL++ GKG WK IS+ FV T+T TQ+ASHAQKYF+ ++ + + ++R
Sbjct: 98 WTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLN---RRRRR 154
Query: 162 KSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIP 196
S+ D T DT++ + + + I QS P
Sbjct: 155 SSLFDMT---TDTVIPMEEDHQVLIQENTSQSSSP 186
>At4g09450 unknown protein (At4g09450)
Length = 200
Score = 76.6 bits (187), Expect = 1e-14
Identities = 38/68 (55%), Positives = 47/68 (68%), Gaps = 3/68 (4%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
W+E+E +LFL+GL K GKG WK+IS+ V ++T TQ+ASHAQKYF Q E KR
Sbjct: 93 WSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQ---ESTNTKR 149
Query: 162 KSIHDTTL 169
SIHD TL
Sbjct: 150 PSIHDMTL 157
>At5g56840 putative protein
Length = 233
Score = 75.9 bits (185), Expect = 2e-14
Identities = 36/65 (55%), Positives = 47/65 (71%), Gaps = 2/65 (3%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WT +EH+ FL GL+K GKG W+ IS+ FVVTK+PTQ+ASHAQKYF+ Q K ++R
Sbjct: 93 WTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHK--RRR 150
Query: 162 KSIHD 166
S+ D
Sbjct: 151 TSLFD 155
>At3g10590 hypothetical protein
Length = 206
Score = 72.0 bits (175), Expect = 3e-13
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
Query: 75 ETLNSNENNLIQAESVPEESHAPRK-----GHWTEDEHKLFLKGLKKHGKGCWKDISKEF 129
E + ++ N + + + E S + R+ WTE+EH+LFL+GLKK+G+G S F
Sbjct: 81 EKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNF 140
Query: 130 VVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKND 173
V TKTP Q++SHAQ Y ++ + K++KR+SI D TL +
Sbjct: 141 VKTKTPRQVSSHAQYYKRQKS----DNKKEKRRSIFDITLESTE 180
>At3g10585 putative protein
Length = 170
Score = 59.3 bits (142), Expect = 2e-09
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 9/80 (11%)
Query: 92 EESHAPRKGHWTEDEHKLFLKGLK--KHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQ 149
E + PR WTE+EH+ L G+ ++GKG W IS+EFV T TQ+ASHAQKY Q
Sbjct: 87 ETNQIPRIIPWTEEEHRN-LAGVDALRYGKGAWSMISREFV---TSTQVASHAQKYDKRQ 142
Query: 150 NVKDIEKKEKKRKSIHDTTL 169
++ K++KR S+ D TL
Sbjct: 143 K---LDSKKRKRWSVLDITL 159
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.309 0.126 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,445,532
Number of Sequences: 26719
Number of extensions: 279232
Number of successful extensions: 1273
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 207
length of query: 289
length of database: 11,318,596
effective HSP length: 98
effective length of query: 191
effective length of database: 8,700,134
effective search space: 1661725594
effective search space used: 1661725594
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC130803.10