Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149547.9 + phase: 0 
         (180 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86651 similar to PIR|F84555|F84555 similar to prolyl 4-hydroxy...   296  3e-81
TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylas...   199  5e-52
TC78028 similar to GP|22136524|gb|AAM91340.1 unknown protein {Ar...   184  2e-47
BG448236 similar to GP|21537370|gb putative prolyl 4-hydroxylase...   181  1e-46
TC78029 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylas...   178  1e-45
TC79830 similar to PIR|G84861|G84861 hypothetical protein At2g43...   165  1e-41
TC83824 similar to GP|17381226|gb|AAL36425.1 unknown protein {Ar...   127  2e-30
AJ388831 weakly similar to GP|10177121|dbj prolyl 4-hydroxylase ...   113  4e-26
BG447864 weakly similar to GP|10177121|db prolyl 4-hydroxylase  ...    60  6e-10
BQ144147                                                               39  0.001
BF518749                                                               30  0.40
TC89950 similar to GP|20257495|gb|AAM15917.1 purple acid phospha...    29  0.88
TC78609 similar to GP|21105746|gb|AAM34772.1 nam-like protein 9 ...    28  2.6
TC78139 similar to PIR|S22502|S22502 cysteine proteinase (EC 3.4...    27  4.4
BG586295                                                               27  5.7
TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {...    26  7.5
TC87885 ankyrin-kinase [Medicago truncatula]                           26  7.5
BQ141859                                                               26  9.8

>TC86651 similar to PIR|F84555|F84555 similar to prolyl 4-hydroxylase alpha
           subunit [imported] - Arabidopsis thaliana, partial (85%)
          Length = 1329

 Score =  296 bits (758), Expect = 3e-81
 Identities = 137/179 (76%), Positives = 153/179 (84%)
 Frame = +2

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           MHKS V+D ETG   DSR RTSSG FL RG D+IV+NIE++IADFTFIPVEHGE   VLH
Sbjct: 446 MHKSTVVDSETGKSKDSRVRTSSGTFLARGRDKIVRNIEKKIADFTFIPVEHGEGLQVLH 625

Query: 61  YEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPWWNE 120
           YEVGQKYEPHYDYF+D F+T   GQRIAT+LMYL+DVEEGGETVFP AKGNFS+VPW+NE
Sbjct: 626 YEVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLTDVEEGGETVFPAAKGNFSNVPWYNE 805

Query: 121 LSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAKWMHVGEFK 179
           LSDCGK GLSIKPK G+A+LFWSMKPDATLD SSLHG CPVIKG+KW   KW+ V E+K
Sbjct: 806 LSDCGKKGLSIKPKRGDALLFWSMKPDATLDASSLHGGCPVIKGNKWSSTKWIRVNEYK 982


>TC86903 similar to GP|21617881|gb|AAM66931.1 prolyl 4-hydroxylase  putative
           {Arabidopsis thaliana}, partial (68%)
          Length = 1310

 Score =  199 bits (506), Expect = 5e-52
 Identities = 93/179 (51%), Positives = 126/179 (69%)
 Frame = +3

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           + KS V D E+G  + S  RTSSG FL +  D IV  IE RIA +TF+PVE+GE+  VLH
Sbjct: 402 LEKSMVADNESGKSIQSEVRTSSGMFLNKQQDEIVSGIEARIAAWTFLPVENGESMQVLH 581

Query: 61  YEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPWWNE 120
           Y  G+KYEPH+D+F D  +    G R+AT+LMYLS+VE+GGET+FP+A+G  S  P    
Sbjct: 582 YMNGEKYEPHFDFFHDKANQRLGGHRVATVLMYLSNVEKGGETIFPHAEGKLSQ-PKDES 758

Query: 121 LSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAKWMHVGEFK 179
            S+C   G ++KP+ G+A+LF+S+  DAT D  SLHG+CPVI+G+KW   KW+HV +F+
Sbjct: 759 WSECAHKGYAVKPRKGDALLFFSLHLDATTDSKSLHGSCPVIEGEKWSATKWIHVADFE 935


>TC78028 similar to GP|22136524|gb|AAM91340.1 unknown protein {Arabidopsis
           thaliana}, partial (86%)
          Length = 1217

 Score =  184 bits (467), Expect = 2e-47
 Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 4/182 (2%)
 Frame = +1

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           + +SAV D  +G    S  RTSSG F+ +  D IV  IE +I+ +TF+P E+GE+  VL 
Sbjct: 223 LKRSAVADNLSGESKLSEVRTSSGMFISKNKDAIVSGIEDKISSWTFLPKENGEDIQVLR 402

Query: 61  YEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPWWNE 120
           YE GQKY+PHYDYF D  +    G R+AT+LMYL++V +GGETVFPNA+   S     +E
Sbjct: 403 YEHGQKYDPHYDYFADKVNIARGGHRVATVLMYLTNVTKGGETVFPNAELQESPRHKLSE 582

Query: 121 ----LSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAKWMHVG 176
               LS+CGK G+++KP+ G+A+LF+S+ P+A  D  SLH  CPVI+G+KW   KW+HV 
Sbjct: 583 TDEDLSECGKKGVAVKPRRGDALLFFSLHPNAIPDTLSLHAGCPVIEGEKWSATKWIHVD 762

Query: 177 EF 178
            F
Sbjct: 763 SF 768


>BG448236 similar to GP|21537370|gb putative prolyl 4-hydroxylase  alpha
           subunit {Arabidopsis thaliana}, partial (52%)
          Length = 682

 Score =  181 bits (459), Expect = 1e-46
 Identities = 84/115 (73%), Positives = 97/115 (84%)
 Frame = +3

Query: 3   KSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLHYE 62
           KS+V+D +TG   +SR RTSSG FLKRG D+I++NIERRIADFTFIPVE+GE   VLHY 
Sbjct: 303 KSSVVDSKTGKSTESRVRTSSGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYG 482

Query: 63  VGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPW 117
           VG+KYEPHYDYF+D F+T   GQR+AT+LMYLSDVEEGGETVFP A  NFSSVPW
Sbjct: 483 VGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAXANFSSVPW 647


>TC78029 similar to GP|21593296|gb|AAM65245.1 prolyl 4-hydroxylase alpha
           subunit-like protein {Arabidopsis thaliana}, partial
           (89%)
          Length = 1126

 Score =  178 bits (451), Expect = 1e-45
 Identities = 87/184 (47%), Positives = 124/184 (67%), Gaps = 6/184 (3%)
 Frame = +3

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           + +SAV D  +G+   S  RTSSG F+ +  D IV  IE RI+ +TF+P E+GE+  VL 
Sbjct: 315 LKRSAVADNLSGDSQLSDVRTSSGMFISKNKDPIVSGIEDRISAWTFLPKENGEDIQVLR 494

Query: 61  YEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNA------KGNFSS 114
           YE GQKY+PHYDYF D  +    G R+AT+LMYL++V +GGETVFP A      +G+  S
Sbjct: 495 YEHGQKYDPHYDYFADKVNIVQGGHRLATVLMYLTNVTKGGETVFPEAEEPPRRRGSKKS 674

Query: 115 VPWWNELSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAKWMH 174
               ++LS+C K G+++KP+ G+A+LF+S+  +A  D +SLH  CPV++G+KW   KW+H
Sbjct: 675 ----SDLSECAKKGIAVKPRRGDALLFFSLDTNAIPDTNSLHAGCPVLEGEKWSATKWIH 842

Query: 175 VGEF 178
           V  F
Sbjct: 843 VDSF 854


>TC79830 similar to PIR|G84861|G84861 hypothetical protein At2g43080
           [imported] - Arabidopsis thaliana, partial (87%)
          Length = 1130

 Score =  165 bits (417), Expect = 1e-41
 Identities = 88/174 (50%), Positives = 108/174 (61%), Gaps = 4/174 (2%)
 Frame = +1

Query: 4   SAVIDEETGNGVDSRERTSSGAFLKRGSDR--IVKNIERRIADFTFIPVEHGENFNVLHY 61
           S V+D  TG G+ S  RTSSG FL     +  ++  IE+RI+ ++ IP+E+GE   VL Y
Sbjct: 421 STVVDANTGKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVLRY 600

Query: 62  EVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPWWNEL 121
           E  Q Y PH+DYF DTF+    GQRIATMLMYL D  EGGET FP+A          +E 
Sbjct: 601 EKNQYYRPHHDYFSDTFNLKRGGQRIATMLMYLGDNVEGGETHFPSAGS--------DEC 756

Query: 122 SDCGK--GGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAKWM 173
           S  GK   GL +KP  GNA+LFWSM  D   DP S+HG CPV+ G+KW   KWM
Sbjct: 757 SCGGKLTKGLCVKPVKGNAVLFWSMGLDGQSDPDSVHGGCPVLAGEKWSATKWM 918


>TC83824 similar to GP|17381226|gb|AAL36425.1 unknown protein {Arabidopsis
           thaliana}, partial (43%)
          Length = 680

 Score =  127 bits (320), Expect = 2e-30
 Identities = 61/122 (50%), Positives = 82/122 (67%)
 Frame = +3

Query: 52  HGENFNVLHYEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGN 111
           HGE FN+L YEVGQ+Y  HYD F          QR+A+ L+YL+DVEEGGET+FP   G 
Sbjct: 3   HGEAFNILRYEVGQRYNSHYDAFNPDEYGPQKSQRVASFLLYLTDVEEGGETMFPFENGL 182

Query: 112 FSSVPWWNELSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIKGDKWLCAK 171
                +  E  DC   GL +KP+ G+ +LF+S+ P+ T+D +SLHG+CPVIKG+KW+  K
Sbjct: 183 NMDGTYGYE--DC--VGLRVKPRQGDGLLFYSLLPNGTIDQTSLHGSCPVIKGEKWVATK 350

Query: 172 WM 173
           W+
Sbjct: 351 WI 356


>AJ388831 weakly similar to GP|10177121|dbj prolyl 4-hydroxylase  alpha
           subunit-like protein {Arabidopsis thaliana}, partial
           (33%)
          Length = 505

 Score =  113 bits (283), Expect = 4e-26
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = +3

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           MHKSAVIDEETGNGVDS ERTSSGAFLKRGSDRIVKNIERRIADFTFIP EHGENFN L 
Sbjct: 291 MHKSAVIDEETGNGVDSSERTSSGAFLKRGSDRIVKNIERRIADFTFIPXEHGENFNGLX 470

Query: 61  YEVGQ 65
            ++ +
Sbjct: 471 MKLAK 485


>BG447864 weakly similar to GP|10177121|db prolyl 4-hydroxylase  alpha
           subunit-like protein {Arabidopsis thaliana}, partial
           (50%)
          Length = 639

 Score = 59.7 bits (143), Expect = 6e-10
 Identities = 28/46 (60%), Positives = 32/46 (68%)
 Frame = +3

Query: 1   MHKSAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFT 46
           MHKS V+D ETG   DS  RT SG FL RG D I +NI ++IADFT
Sbjct: 501 MHKSTVVDSETGKSKDSXVRTXSGTFLARGRDXIXRNIXKKIADFT 638


>BQ144147 
          Length = 729

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +2

Query: 46  TFIPVEHGENFNVLHYEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVF 105
           T +P+E+G+N ++  Y+ G  + P+ +Y     +    G R  T+LM +++  +G    F
Sbjct: 92  TSLPIENGDNLHIWRYKHGHNHNPNDNYSTHKINIVQGGHRPPTVLMLITNETKGNRN*F 271

Query: 106 PNAKGNFSSV 115
            +  G  SS+
Sbjct: 272 -SQSGRTSSM 298


>BF518749 
          Length = 416

 Score = 30.4 bits (67), Expect = 0.40
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +1

Query: 8   DEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLH 60
           ++ +GNG  S++  +S        D IVK IE R++ +TF+  E+ +   V+H
Sbjct: 268 EKSSGNGGYSKKEETSLDM----DDDIVKRIEERLSVWTFLSKENSKPLQVMH 414


>TC89950 similar to GP|20257495|gb|AAM15917.1 purple acid phosphatase
           {Arabidopsis thaliana}, partial (59%)
          Length = 1014

 Score = 29.3 bits (64), Expect = 0.88
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 114 SVPWWNELSDCGKGGLSIKPKMGNAILFWSMKPDATLDPSSLHGACPVIK 163
           SV WWN     G+G L   PK    +    +      DP+ L G+CP ++
Sbjct: 127 SVVWWNPTQARGRGWL---PKATMRLRVSLLSNHMPSDPTMLVGSCPTMR 267


>TC78609 similar to GP|21105746|gb|AAM34772.1 nam-like protein 9 {Petunia x
           hybrida}, partial (39%)
          Length = 1931

 Score = 27.7 bits (60), Expect = 2.6
 Identities = 11/38 (28%), Positives = 20/38 (51%)
 Frame = +1

Query: 5   AVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRI 42
           + +D++ G G  +   T  G +   G DR++KN E  +
Sbjct: 304 SALDKKYGTGCRTNRATDRGYWKTTGKDRVIKNGEETV 417


>TC78139 similar to PIR|S22502|S22502 cysteine proteinase (EC 3.4.22.-) -
           kidney bean, complete
          Length = 1720

 Score = 26.9 bits (58), Expect = 4.4
 Identities = 18/68 (26%), Positives = 25/68 (36%)
 Frame = +3

Query: 50  VEHGENFNVLHYEVGQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAK 109
           V H  N N +      K     D     F TTYAG ++    M+       G  ++ N  
Sbjct: 630 VMHVHNTNKMDKPYKLKLNKFADMTNHEFKTTYAGSKVNHHRMFRGTPRVSGTFMYENFT 809

Query: 110 GNFSSVPW 117
              +SV W
Sbjct: 810 KAPASVDW 833


>BG586295 
          Length = 807

 Score = 26.6 bits (57), Expect = 5.7
 Identities = 27/117 (23%), Positives = 48/117 (40%)
 Frame = -3

Query: 4   SAVIDEETGNGVDSRERTSSGAFLKRGSDRIVKNIERRIADFTFIPVEHGENFNVLHYEV 63
           SA ID  T   +DS+ RTS      RG  R+V  ++  ++D       HGE  +   Y  
Sbjct: 370 SASIDRPTNISIDSQRRTSIDEATNRG--RLVPKMKSDMSD----THNHGEEISTDTYAT 209

Query: 64  GQKYEPHYDYFMDTFSTTYAGQRIATMLMYLSDVEEGGETVFPNAKGNFSSVPWWNE 120
             +++ + +   D        Q+I      ++D+   G+    +  G      W+N+
Sbjct: 208 LMRHQFNLESLGDRL------QKIENTTATMNDIWCRGDEAIRHFTGT-----WFNK 71


>TC78237 similar to GP|17933299|gb|AAL48232.1 AT4g17800/dl4935c {Arabidopsis
           thaliana}, partial (59%)
          Length = 1166

 Score = 26.2 bits (56), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (59%)
 Frame = +2

Query: 112 FSSVPWWNELSDCGK 126
           F  VPWW   S CG+
Sbjct: 581 FECVPWWRPRSSCGR 625


>TC87885 ankyrin-kinase [Medicago truncatula]
          Length = 1605

 Score = 26.2 bits (56), Expect = 7.5
 Identities = 10/21 (47%), Positives = 16/21 (75%)
 Frame = +1

Query: 145  KPDATLDPSSLHGACPVIKGD 165
            +P+A +DPSSL+ A  + +GD
Sbjct: 1228 QPEANIDPSSLYVAPEIYRGD 1290


>BQ141859 
          Length = 862

 Score = 25.8 bits (55), Expect = 9.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 107 NAKGNFSSVPWWNELSDCGKGGLSIKPKMGNAI 139
           +AKGN   +PW  E ++  KG   I+   G  I
Sbjct: 271 SAKGNVFDIPWQYEENEIPKGVFGIRGGTGGHI 173


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.137    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,852,311
Number of Sequences: 36976
Number of extensions: 78133
Number of successful extensions: 345
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of query: 180
length of database: 9,014,727
effective HSP length: 90
effective length of query: 90
effective length of database: 5,686,887
effective search space: 511819830
effective search space used: 511819830
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)


Medicago: description of AC149547.9