TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149306.10 - phase: 0 /pseudo
         (138 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79470 similar to GP|15450980|gb|AAK96761.1 Unknown protein {Ar...    28  0.89
BG587128                                                               28  1.2
AW688560 similar to PIR|T51529|T515 hypothetical protein T20K14_...    27  2.0
TC90830                                                                27  2.6
BE202593                                                               27  3.4
TC78735 similar to GP|10178184|dbj|BAB11658. 50S ribosomal prote...    27  3.4
CA990974 homologue to GP|23496034|gb|A hypothetical protein {Pla...    26  4.4
TC87279 weakly similar to GP|8843755|dbj|BAA97303.1 gene_id:MXK3...    26  4.4
TC84889 similar to GP|21537003|gb|AAM61344.1 unknown {Arabidopsi...    26  5.8
TC88769 homologue to GP|19881561|gb|AAM00962.1 hypothetical prot...    25  7.6
TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14 ...    25  7.6
TC78649 weakly similar to GP|6651029|gb|AAF22136.1| gamma-glutam...    25  9.9
BG586932 homologue to PIR|T52080|T52 multi resistance protein [i...    25  9.9

>TC79470 similar to GP|15450980|gb|AAK96761.1 Unknown protein {Arabidopsis
           thaliana}, partial (47%)
          Length = 1041

 Score = 28.5 bits (62), Expect = 0.89
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +3

Query: 73  GSFEICPILSSGLLSFLFQGSYMYNLFP*IFFFFLNIRGVVKFLRKLLGSIGIQYVYLWI 132
           GSF      SS   SF F  S    LFP I F +   R +V     + G+IG+ + +LW+
Sbjct: 210 GSFHSSTTSSS---SFPFSSSL---LFPSIHF*YQPPRSMVHLCFHVCGNIGVLHCFLWL 371


>BG587128 
          Length = 632

 Score = 28.1 bits (61), Expect = 1.2
 Identities = 13/31 (41%), Positives = 18/31 (57%)
 Frame = +3

Query: 86  LSFLFQGSYMYNLFP*IFFFFLNIRGVVKFL 116
           L  +FQ   +YN+ P  FF F NI   +K+L
Sbjct: 438 LMMIFQNPVIYNIHPRFFFCF*NIIRFLKYL 530


>AW688560 similar to PIR|T51529|T515 hypothetical protein T20K14_120 -
           Arabidopsis thaliana, partial (8%)
          Length = 601

 Score = 27.3 bits (59), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (52%), Gaps = 3/43 (6%)
 Frame = -3

Query: 88  FLFQGSYMYNL---FP*IFFFFLNIRGVVKFLRKLLGSIGIQY 127
           FLF  +Y+ N    F  +FFFF+ I  ++K L   L  I I Y
Sbjct: 506 FLFFNNYIINFRNFFFMLFFFFIFINPILKKLFLTLSQIPISY 378


>TC90830 
          Length = 603

 Score = 26.9 bits (58), Expect = 2.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 85  LLSFLFQGSYMYNLFP*IFFFFLN 108
           L+ FLFQ  +   +F *IFFFFLN
Sbjct: 566 LIEFLFQNFF---IFL*IFFFFLN 504


>BE202593 
          Length = 557

 Score = 26.6 bits (57), Expect = 3.4
 Identities = 15/44 (34%), Positives = 22/44 (49%), Gaps = 1/44 (2%)
 Frame = -1

Query: 65  ISIFWWPSGSFEIC-PILSSGLLSFLFQGSYMYNLFP*IFFFFL 107
           + I WWPS  FE C  +++       F  S++ +   *I  FFL
Sbjct: 506 VCILWWPSLIFESCLQVVNGWWYKVAFVRSFLMHKVY*INTFFL 375


>TC78735 similar to GP|10178184|dbj|BAB11658. 50S ribosomal protein L29
           {Arabidopsis thaliana}, partial (68%)
          Length = 860

 Score = 26.6 bits (57), Expect = 3.4
 Identities = 23/89 (25%), Positives = 42/89 (46%)
 Frame = +3

Query: 47  LETCC*KNCC*IVVVEP*ISIFWWPSGSFEICPILSSGLLSFLFQGSYMYNLFP*IFFFF 106
           +E  C* NCC* + +     IFWW S S  I       +L  +  GS  + +F  ++   
Sbjct: 594 IELHC*-NCC*SLFL-----IFWWMSSSRCI------NILFVVTYGSSCHKVFYVVYSVT 737

Query: 107 LNIRGVVKFLRKLLGSIGIQYVYLWIVVV 135
           + I   +  L+     +GI +++ +I ++
Sbjct: 738 VRIETWLSKLQFTAFKLGIHFLFCFIRIL 824


>CA990974 homologue to GP|23496034|gb|A hypothetical protein {Plasmodium
           falciparum 3D7}, partial (36%)
          Length = 564

 Score = 26.2 bits (56), Expect = 4.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 27  YYSVCLFGVAYWW 39
           Y+ +C+FGV  WW
Sbjct: 562 YHDICIFGVP*WW 524


>TC87279 weakly similar to GP|8843755|dbj|BAA97303.1 gene_id:MXK3.14~unknown
            protein {Arabidopsis thaliana}, partial (39%)
          Length = 1468

 Score = 26.2 bits (56), Expect = 4.4
 Identities = 19/51 (37%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
 Frame = -3

Query: 72   SGSFEICPILSSGLLSF--LFQGSYMYNLFP*IFFFFLNIRGVVKFLRKLL 120
            +G F   P LS G L F  LF   ++      IF FF  +  + KF+ KLL
Sbjct: 1010 NGFFPRFPCLSIGFLCFPNLFPDKFLEG----IFLFFCQLFRLNKFISKLL 870


>TC84889 similar to GP|21537003|gb|AAM61344.1 unknown {Arabidopsis
           thaliana}, partial (29%)
          Length = 770

 Score = 25.8 bits (55), Expect = 5.8
 Identities = 14/30 (46%), Positives = 18/30 (59%)
 Frame = -3

Query: 92  GSYMYNLFP*IFFFFLNIRGVVKFLRKLLG 121
           GSY  N     FF++  +RGVV FL +L G
Sbjct: 120 GSYELN-----FFYYEGLRGVVGFLYRLEG 46


>TC88769 homologue to GP|19881561|gb|AAM00962.1 hypothetical protein {Oryza
           sativa} [Oryza sativa (japonica cultivar-group)],
           partial (7%)
          Length = 912

 Score = 25.4 bits (54), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (53%)
 Frame = +1

Query: 10  WYMGCQTVVFSVEL*NRYYSVCLF 33
           WY  C+  + SV   N Y++ C F
Sbjct: 652 WYRRCRRQICSVSSTNYYFNFCFF 723


>TC77447 similar to GP|16974501|gb|AAL31160.1 AT3g06720/F3E22_14 {Arabidopsis
            thaliana}, partial (96%)
          Length = 2271

 Score = 25.4 bits (54), Expect = 7.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 99   FP*IFFFFLNIRGVVKFLRKLLGSIGIQYVYLWIV 133
            +P +F F      ++ F+R     I IQYV LW +
Sbjct: 2117 YPVLFLFLPKFTSILLFIR-----ISIQYVQLWFL 2206


>TC78649 weakly similar to GP|6651029|gb|AAF22136.1| gamma-glutamylcysteine
           synthetase precursor {Phaseolus vulgaris}, partial (32%)
          Length = 1052

 Score = 25.0 bits (53), Expect = 9.9
 Identities = 11/31 (35%), Positives = 19/31 (60%)
 Frame = +3

Query: 103 FFFFLNIRGVVKFLRKLLGSIGIQYVYLWIV 133
           F F  NIR +  ++  + G + IQYV L+++
Sbjct: 933 FLFINNIRNLCPYV*FIYGLVQIQYVQLFLL 1025


>BG586932 homologue to PIR|T52080|T52 multi resistance protein [imported] -
           Arabidopsis thaliana, partial (3%)
          Length = 648

 Score = 25.0 bits (53), Expect = 9.9
 Identities = 10/28 (35%), Positives = 16/28 (56%), Gaps = 4/28 (14%)
 Frame = -2

Query: 10  WYMGCQTVVFS----VEL*NRYYSVCLF 33
           W M C T++FS    + + NR Y +C +
Sbjct: 509 WLMSCDTLLFS*TIHLNVINRIYELCYY 426


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.368    0.170    0.704 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,791,460
Number of Sequences: 36976
Number of extensions: 95483
Number of successful extensions: 1484
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of query: 138
length of database: 9,014,727
effective HSP length: 86
effective length of query: 52
effective length of database: 5,834,791
effective search space: 303409132
effective search space used: 303409132
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 53 (25.0 bits)