BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146752.2 + phase: 0
(394 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF645180 weakly similar to GP|16226290|gb At1g18480/F15H18_1 {Ar... 422 e-118
TC84422 similar to GP|16226290|gb|AAL16125.1 At1g18480/F15H18_1 ... 185 2e-47
BG450922 similar to PIR|H86204|H86 hypothetical protein [importe... 112 2e-25
BQ144314 weakly similar to GP|21322711|em pherophorin-dz1 protei... 35 0.038
TC81191 similar to GP|6143879|gb|AAF04426.1| unknown protein {Ar... 35 0.066
BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 34 0.11
TC76559 GP|20385063|gb|AAM21172.1 serine/threonine protein phosp... 33 0.15
AL378129 GP|20385063|g serine/threonine protein phosphatase 2A {... 33 0.15
TC87324 homologue to PIR|E86217|E86217 protein T27G7.10 [importe... 33 0.19
BQ135613 similar to GP|14017929|db KIAA1856 protein {Homo sapien... 33 0.19
BG456431 similar to PIR|T02472|T024 hypothetical protein At2g457... 33 0.19
TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. ... 32 0.43
TC79854 weakly similar to PIR|T04889|T04889 hypothetical protein... 32 0.56
BE249461 similar to PIR|T04455|T044 hypothetical protein F4D11.9... 32 0.56
BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 32 0.56
TC79703 homologue to GP|21615411|emb|CAD33925. proline rich prot... 32 0.56
TC89597 homologue to GP|17473753|gb|AAL38317.1 unknown protein {... 31 0.73
BQ144385 similar to GP|21740500|emb OSJNBa0006B20.15 {Oryza sati... 31 0.73
TC83068 similar to GP|9279622|dbj|BAB01080.1 gene_id:MOJ10.6~unk... 31 0.95
BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 31 0.95
>BF645180 weakly similar to GP|16226290|gb At1g18480/F15H18_1 {Arabidopsis
thaliana}, partial (32%)
Length = 650
Score = 422 bits (1085), Expect = e-118
Identities = 207/208 (99%), Positives = 207/208 (99%)
Frame = +2
Query: 1 MEFEKQNSNTFCNQIPNFLSSFIDTFVDFSVSGGLFLPPPPSSPPPIPTRLPSPSRLIAI 60
MEFEKQNSNTFCNQIPNFLSSFIDTFVDFSVSGGLFLPPPPSSPPPIPTRLPSPSRLIAI
Sbjct: 26 MEFEKQNSNTFCNQIPNFLSSFIDTFVDFSVSGGLFLPPPPSSPPPIPTRLPSPSRLIAI 205
Query: 61 GDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRGGDEIKILYLLEKLKRQA 120
GDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRGGDEIKILYLLEKLKRQA
Sbjct: 206 GDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRGGDEIKILYLLEKLKRQA 385
Query: 121 AIHGGNFITMNGNHEIMNAEGDFRFATKNGVEEFKVWLEWFRQGNKMKNLCKGLEETVVD 180
AIHGGNFITMNGNHEIMNAEGDFRFATKNGVEEFKVWLEWFRQGNKMKNLCKGLEETVVD
Sbjct: 386 AIHGGNFITMNGNHEIMNAEGDFRFATKNGVEEFKVWLEWFRQGNKMKNLCKGLEETVVD 565
Query: 181 PLENVHVAFRGVREEFHDGFRARVAALR 208
PLENVHVAFRGVREEFHDGF ARVAALR
Sbjct: 566 PLENVHVAFRGVREEFHDGFXARVAALR 649
>TC84422 similar to GP|16226290|gb|AAL16125.1 At1g18480/F15H18_1
{Arabidopsis thaliana}, partial (15%)
Length = 654
Score = 185 bits (470), Expect = 2e-47
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +2
Query: 305 MIMGHTIQKEGINGVCENKAIRIDVGMSKGCGGGLPEVLEIDRYGVRILTSNPLYNQMNK 364
MIMGHTIQKEGINGVCENKAIRIDVGMSKGCGGGLPEVLEIDRYGVRILTSNPLYNQMNK
Sbjct: 2 MIMGHTIQKEGINGVCENKAIRIDVGMSKGCGGGLPEVLEIDRYGVRILTSNPLYNQMNK 181
Query: 365 ENVDIGKVEEGFGLLLNNQDGRPRQVEVKA 394
ENVDIGKVEEGFGLLLNNQDGRPRQVEVKA
Sbjct: 182 ENVDIGKVEEGFGLLLNNQDGRPRQVEVKA 271
>BG450922 similar to PIR|H86204|H86 hypothetical protein [imported] -
Arabidopsis thaliana, partial (30%)
Length = 669
Score = 112 bits (280), Expect = 2e-25
Identities = 56/116 (48%), Positives = 78/116 (66%), Gaps = 3/116 (2%)
Frame = +1
Query: 48 PTRLPSPSR-LIAIGDLHGDLKKSKEALSIAGLIDSSGN--YTGGSATVVQIGDVLDRGG 104
PT + +P R ++A+GDLHGDLK+++ AL +AG++ S G +TGG ++Q+GD+LDRG
Sbjct: 256 PTFVSAPGRTILAVGDLHGDLKQARYALEMAGVLSSDGQDLWTGGENVLIQLGDILDRGE 435
Query: 105 DEIKILYLLEKLKRQAAIHGGNFITMNGNHEIMNAEGDFRFATKNGVEEFKVWLEW 160
DEI IL LL L +QA GG +NGNHE MN EGDFR+ G +E + E+
Sbjct: 436 DEIAILSLLRSLDKQAKSKGGAVFQVNGNHETMNVEGDFRYVDSGGFDECXDFXEY 603
>BQ144314 weakly similar to GP|21322711|em pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (6%)
Length = 1154
Score = 35.4 bits (80), Expect = 0.038
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 36 FLPPPPSSPPPIPTRLPSP 54
FLPPPP PPP P +LP+P
Sbjct: 27 FLPPPPPLPPPPPPKLPTP 83
>TC81191 similar to GP|6143879|gb|AAF04426.1| unknown protein {Arabidopsis
thaliana}, partial (98%)
Length = 1067
Score = 34.7 bits (78), Expect = 0.066
Identities = 28/103 (27%), Positives = 41/103 (39%)
Frame = +1
Query: 44 PPPIPTRLPSPSRLIAIGDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRG 103
P T P +I IGD+HG + K + S L + +AT++ +GD DRG
Sbjct: 1 PKTTMTEATQPRTIICIGDIHGYITKLQNLWS--NLSHTIPPSIFSTATIIFLGDYCDRG 174
Query: 104 GDEIKILYLLEKLKRQAAIHGGNFITMNGNHEIMNAEGDFRFA 146
++L L L + N H + DF FA
Sbjct: 175 PKTREVLDFLISLPTRYP---------NQRHVFLAGNHDFAFA 276
>BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (16%)
Length = 993
Score = 33.9 bits (76), Expect = 0.11
Identities = 15/21 (71%), Positives = 16/21 (75%), Gaps = 1/21 (4%)
Frame = +2
Query: 36 FLPPPPS-SPPPIPTRLPSPS 55
F PPPP SPPP+P LPSPS
Sbjct: 188 FSPPPPLLSPPPLPLSLPSPS 250
Score = 30.0 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = +3
Query: 38 PPPPSSPPPIPTRLPSPSR 56
P PP+ PPP P P+PSR
Sbjct: 324 PRPPAPPPPAPAPRPAPSR 380
>TC76559 GP|20385063|gb|AAM21172.1 serine/threonine protein phosphatase 2A
{Pisum sativum}, complete
Length = 1305
Score = 33.5 bits (75), Expect = 0.15
Identities = 23/84 (27%), Positives = 38/84 (44%)
Frame = +2
Query: 52 PSPSRLIAIGDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRGGDEIKILY 111
P S + GD+HG + G + + NY + +GD +DRG + +++
Sbjct: 248 PVNSPVTVCGDIHGQFHDLMKLFQTGGHVPET-NY-------IFMGDFVDRGYNSLEVFT 403
Query: 112 LLEKLKRQAAIHGGNFITMNGNHE 135
+L LK A + N + GNHE
Sbjct: 404 ILLLLK---ARYPANITLLRGNHE 466
>AL378129 GP|20385063|g serine/threonine protein phosphatase 2A {Pisum
sativum}, partial (37%)
Length = 421
Score = 33.5 bits (75), Expect = 0.15
Identities = 23/84 (27%), Positives = 38/84 (44%)
Frame = +2
Query: 52 PSPSRLIAIGDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLDRGGDEIKILY 111
P S + GD+HG + G + + NY + +GD +DRG + +++
Sbjct: 176 PVNSPVTVCGDIHGQFHDLMKLFQTGGHVPET-NY-------IFMGDFVDRGYNSLEVFT 331
Query: 112 LLEKLKRQAAIHGGNFITMNGNHE 135
+L LK A + N + GNHE
Sbjct: 332 ILLLLK---ARYPANITLLRGNHE 394
>TC87324 homologue to PIR|E86217|E86217 protein T27G7.10 [imported] -
Arabidopsis thaliana, partial (37%)
Length = 1897
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 43 SPPPIPTRLPSPSRLIAIGDLHGDLKKSKEALSIAGLIDSSGN-YTGGSATVVQ---IGD 98
S P +L +P ++ GDLHG + L D G+ T G + +GD
Sbjct: 353 SSEPTVIQLRAPIKIF--GDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGD 508
Query: 99 VLDRGGDEIKILYLLEKLKRQAAIHGGNFITMNGNHEIMNAEGDFRF 145
+DRG ++ + LL LK + + N + GNHE + F F
Sbjct: 509 YVDRGQHSLETISLLLALKVE---YPNNIHLIRGNHEAADINALFGF 640
>BQ135613 similar to GP|14017929|db KIAA1856 protein {Homo sapiens},
partial (3%)
Length = 1048
Score = 33.1 bits (74), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 38 PPPPSSPPPIPTRLPSPSRLIAIGDL 63
PPPP S PP P P PS +G L
Sbjct: 9 PPPPPSSPPFPPHFPPPSLFFFLGGL 86
Score = 27.7 bits (60), Expect = 8.0
Identities = 11/17 (64%), Positives = 12/17 (69%)
Frame = +1
Query: 38 PPPPSSPPPIPTRLPSP 54
PPPP PPP+P PSP
Sbjct: 1 PPPPPPPPPLP---PSP 42
>BG456431 similar to PIR|T02472|T024 hypothetical protein At2g45750
[imported] - Arabidopsis thaliana, partial (11%)
Length = 617
Score = 33.1 bits (74), Expect = 0.19
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 21 SFIDTFVDFSVSGGLFLPPPPSSPPPI----PTRLPSP 54
S++ +F S+ G+ + PPPSSPPP+ P LP P
Sbjct: 166 SYVPSFT--SLLSGIIILPPPSSPPPVTPPPPLNLPPP 273
>TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. [Mouse-ear
cress] {Arabidopsis thaliana}, partial (32%)
Length = 1250
Score = 32.0 bits (71), Expect = 0.43
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Frame = +2
Query: 6 QNSNTFCNQIPNFLS---SFIDTFVDFSVSGGLFLP-------PPPSSPPPIPTRLPSPS 55
QNS N PNF + F+D F + + LP P +SPPPI + + SPS
Sbjct: 62 QNSKQIQNHNPNFKNPNFKFLDLFHPWLLPSSCLLPIHLLLHLPNLTSPPPISSTIKSPS 241
>TC79854 weakly similar to PIR|T04889|T04889 hypothetical protein F18F4.150
- Arabidopsis thaliana, partial (19%)
Length = 955
Score = 31.6 bits (70), Expect = 0.56
Identities = 27/101 (26%), Positives = 39/101 (37%)
Frame = +1
Query: 42 SSPPPIPTRLPSPSRLIAIGDLHGDLKKSKEALSIAGLIDSSGNYTGGSATVVQIGDVLD 101
SSP P P+ +PS DLKKS E L D +GN A + I D
Sbjct: 535 SSPSPSPSPMPSQ-----------DLKKSHEYLVTLYGADPTGNSDSTDALLAAIADAAK 681
Query: 102 RGGDEIKILYLLEKLKRQAAIHGGNFITMNGNHEIMNAEGD 142
+ +++ Q + GGN++ H M G+
Sbjct: 682 GPSKGFLMNGIIDLGGAQINLQGGNYLISKPLHFPMAGVGN 804
>BE249461 similar to PIR|T04455|T044 hypothetical protein F4D11.90 -
Arabidopsis thaliana, partial (2%)
Length = 257
Score = 31.6 bits (70), Expect = 0.56
Identities = 23/52 (44%), Positives = 26/52 (49%), Gaps = 6/52 (11%)
Frame = +1
Query: 11 FCNQIPNF------LSSFIDTFVDFSVSGGLFLPPPPSSPPPIPTRLPSPSR 56
F QIPNF + T + +VS LPPPP SPPP LPSP R
Sbjct: 34 FSLQIPNF*FP*WRIPKESSTSISRAVSTHN-LPPPPQSPPP----LPSPPR 174
>BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (23%)
Length = 1217
Score = 31.6 bits (70), Expect = 0.56
Identities = 18/42 (42%), Positives = 23/42 (53%), Gaps = 1/42 (2%)
Frame = -3
Query: 35 LFLPPPPSSPPPIPTRLPSPSRLIA-IGDLHGDLKKSKEALS 75
L+ PPPPS PPI T L SP L + + LH L + +S
Sbjct: 831 LYAPPPPSILPPILTPLSSPISLRSLLSPLHFTLSRLSRCVS 706
Score = 30.0 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 31 VSGGLFLPPPPSSPPPIPTRLPSP 54
+S LPPPP PPP P P P
Sbjct: 242 ISPPFLLPPPPPRPPPPPPGRPRP 171
Score = 27.7 bits (60), Expect = 8.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 39 PPPSSPPPIPTRLPSPSR 56
PP SSPPP P P+P R
Sbjct: 237 PPVSSPPPTPPPPPAPPR 184
>TC79703 homologue to GP|21615411|emb|CAD33925. proline rich protein 3
{Cicer arietinum}, partial (67%)
Length = 812
Score = 31.6 bits (70), Expect = 0.56
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 38 PPPPSSPPPIPTRLPSPS----RLIAIGDLHGDLKK 69
PP + PPP PT +PSPS R I I L D+K+
Sbjct: 181 PPAAAPPPPQPTAIPSPSSEEVRTIFITGLPEDVKE 288
>TC89597 homologue to GP|17473753|gb|AAL38317.1 unknown protein {Arabidopsis
thaliana}, partial (10%)
Length = 1061
Score = 31.2 bits (69), Expect = 0.73
Identities = 18/49 (36%), Positives = 26/49 (52%), Gaps = 9/49 (18%)
Frame = +1
Query: 32 SGGLFLPPPPSSPPPIPTR-----LPSP----SRLIAIGDLHGDLKKSK 71
S G+ PPP ++PPP+P R LP P S + + D L+K+K
Sbjct: 337 SNGIPAPPPRTTPPPLPKRAMPPPLPPPKFYDSIEVKVQDKSNSLRKTK 483
>BQ144385 similar to GP|21740500|emb OSJNBa0006B20.15 {Oryza sativa},
partial (14%)
Length = 1329
Score = 31.2 bits (69), Expect = 0.73
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 38 PPPPSSPPPIPTRLP 52
PPPP PPP PTR P
Sbjct: 4 PPPPPPPPPTPTRTP 48
>TC83068 similar to GP|9279622|dbj|BAB01080.1 gene_id:MOJ10.6~unknown
protein {Arabidopsis thaliana}, partial (8%)
Length = 493
Score = 30.8 bits (68), Expect = 0.95
Identities = 11/19 (57%), Positives = 14/19 (72%)
Frame = +2
Query: 38 PPPPSSPPPIPTRLPSPSR 56
PPP SSPPP+P P+P +
Sbjct: 284 PPPSSSPPPLPPLPPTPQQ 340
>BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (24%)
Length = 1059
Score = 30.8 bits (68), Expect = 0.95
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 36 FLPPPPSSPPPIPTRLPS 53
FLPPPPS P P P+ LP+
Sbjct: 460 FLPPPPSGPLPPPSPLPT 407
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.141 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,687,933
Number of Sequences: 36976
Number of extensions: 213680
Number of successful extensions: 5588
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 2706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4680
length of query: 394
length of database: 9,014,727
effective HSP length: 98
effective length of query: 296
effective length of database: 5,391,079
effective search space: 1595759384
effective search space used: 1595759384
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146752.2