BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146589.2 + phase: 0
(277 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene r... 271 2e-73
CB893400 similar to PIR|B86197|B861 hypothetical protein [import... 163 6e-41
TC88858 similar to GP|17979408|gb|AAL49846.1 putative ethylene r... 123 9e-29
TC86775 similar to PIR|T02434|T02434 DNA binding protein EREBP-4... 113 9e-26
AL367092 similar to GP|7939534|dbj| ethylene response DNA bindin... 103 7e-23
TC88498 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive... 100 8e-22
TC76841 homologue to GP|8809606|dbj|BAA97157.1 ethylene responsi... 99 1e-21
TC79268 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive... 99 2e-21
TC83854 similar to GP|21554205|gb|AAM63284.1 ethylene response f... 99 2e-21
TC86332 similar to GP|7528276|gb|AAF63205.1| AP2-related transcr... 97 7e-21
BF647376 similar to GP|7939533|dbj| Nicotiana EREBP-3-like prote... 97 7e-21
TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive... 97 7e-21
TC76842 similar to GP|8809606|dbj|BAA97157.1 ethylene responsive... 95 3e-20
TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein... 95 3e-20
BQ136507 similar to GP|7939534|dbj| ethylene response DNA bindin... 94 6e-20
TC78789 homologue to PIR|T48580|T48580 hypothetical protein T31B... 94 7e-20
TC76795 similar to GP|18496063|emb|CAD21849. ethylene responsive... 93 1e-19
TC76792 similar to GP|3264767|gb|AAC24587.1| AP2 domain containi... 92 2e-19
BE319790 similar to GP|17979408|gb| putative ethylene reponse fa... 91 5e-19
AW559374 similar to GP|17381278|gb| AT4g34410/F10M10_180 {Arabid... 87 5e-18
>TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene reponse
factor AP2 domain transcription factor {Arabidopsis
thaliana}, partial (40%)
Length = 1084
Score = 271 bits (694), Expect = 2e-73
Identities = 159/277 (57%), Positives = 189/277 (67%), Gaps = 1/277 (0%)
Frame = +2
Query: 1 MNFYPPYLKNQNQNLLYFTEDSLSNIYWELE-DVVNYFNGDINFKKDSQSQTKESLLLPL 59
M+F +NQNQNL+YF +N WELE D VN+F+ N+ S S +
Sbjct: 104 MDFDSLLFQNQNQNLMYFP----NNFSWELEEDFVNFFSDVNNYSNSSGSLSS------- 250
Query: 60 SLYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLP 119
ESNSS +LSN LEVS N T Y QVIKET+TS S P
Sbjct: 251 ---TESNSSGSVLSNEPLEVSSNTT--YKQVIKETQTS------------------SPPP 361
Query: 120 LPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAK 179
P IKES KR RGVR RPWGKFAAEIRDSTRKG RVW+GTF+T E AALAYDQAAFS +
Sbjct: 362 PPPIKESKKRAFRGVRTRPWGKFAAEIRDSTRKGVRVWIGTFDTAEAAALAYDQAAFSTR 541
Query: 180 GSLAVLNFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIK 239
GSLAVLNFPE+VV++SLKEMA NS+PL+EGTSPVLA+KRK H RK SN+VS K+IK
Sbjct: 542 GSLAVLNFPEEVVRESLKEMASNSKPLDEGTSPVLALKRK----HSMRKKSNKVSTKRIK 709
Query: 240 IDHNGDRTKRETNTKSKHVFVFEDLGAEYLEQLLSLT 276
+++ D+ + ETN S+++FVFEDLGAEYL+QLLSLT
Sbjct: 710 SEYHSDQIQIETNINSQNLFVFEDLGAEYLDQLLSLT 820
>CB893400 similar to PIR|B86197|B861 hypothetical protein [imported] -
Arabidopsis thaliana, partial (34%)
Length = 565
Score = 163 bits (413), Expect = 6e-41
Identities = 87/152 (57%), Positives = 111/152 (72%)
Frame = +2
Query: 126 SNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVL 185
S K+ +GVRRRPWGKFAAEIRDSTRKG RVW+GTF+T E AALAYDQAA S +GS+AVL
Sbjct: 53 SPKKSYKGVRRRPWGKFAAEIRDSTRKGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVL 232
Query: 186 NFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGD 245
NFPE VV++SLK+M N ++G+SPVLA+KRK + RKS KK +++
Sbjct: 233 NFPEHVVRESLKDMENNKSWEKDGSSPVLALKRK---HTLKRKSKASNCKKTKRVER--- 394
Query: 246 RTKRETNTKSKHVFVFEDLGAEYLEQLLSLTS 277
+ N S++V V EDLG+EYL+QLLSL++
Sbjct: 395 EMENNNNIVSQNVLVLEDLGSEYLDQLLSLST 490
>TC88858 similar to GP|17979408|gb|AAL49846.1 putative ethylene reponse
factor AP2 domain transcription factor {Arabidopsis
thaliana}, partial (28%)
Length = 658
Score = 123 bits (308), Expect = 9e-29
Identities = 76/164 (46%), Positives = 98/164 (59%)
Frame = +2
Query: 73 SNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRVLR 132
S+ S E+ T V +E SL + K N K S +++ + KR+ R
Sbjct: 158 SSYSGEMDLQELTYNGHVEEENSPQPSL-APKTLNPKPPSCKSTNHSHVNPTKREKRLYR 334
Query: 133 GVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVV 192
GVR RPWGKFAAEIRD+TR G RVW+GTF+T E AALAYDQAAF +G A+LNF E VV
Sbjct: 335 GVRTRPWGKFAAEIRDTTRNGVRVWIGTFDTAEAAALAYDQAAFLTRGYRAILNFSEHVV 514
Query: 193 KDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKK 236
K+SL+ M + L +G SP+L ++KR H+ R S SKK
Sbjct: 515 KESLQNMNFKT-LLNQGCSPLL----ELKRMHVLRTRSKNPSKK 631
>TC86775 similar to PIR|T02434|T02434 DNA binding protein EREBP-4 - common
tobacco, partial (33%)
Length = 1230
Score = 113 bits (282), Expect = 9e-26
Identities = 77/185 (41%), Positives = 97/185 (51%), Gaps = 23/185 (12%)
Frame = +2
Query: 41 INFKKDSQSQTKESLLLPLSLYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSL 100
I FKK Q Q + E N F S+ +LE+ N+ + +K+T+T +
Sbjct: 53 ILFKKTEQPQFRSM---------EQNIEFTFWSSNNLEIQ--NSISQSNNMKQTQTHFQI 199
Query: 101 P---------SKKNKNKKKTS------SLASSLPLPAI--------KESNKRVLRGVRRR 137
P S N + +K S S+ LP I KE NK RGVRRR
Sbjct: 200 PQTTFSKPPRSSSNLSNRKPSLNITIPSITKPLPQQNIVKSENTNTKEDNKHY-RGVRRR 376
Query: 138 PWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLK 197
WGKFAAEIRD RKG+RVWLGTF+T EAA AYD+AAF +GS A+LNFP DV DS++
Sbjct: 377 TWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFQMRGSKAILNFPLDVATDSVE 556
Query: 198 EMAIN 202
N
Sbjct: 557 SSLSN 571
>AL367092 similar to GP|7939534|dbj| ethylene response DNA binding
protein-like {Arabidopsis thaliana}, partial (33%)
Length = 425
Score = 103 bits (257), Expect = 7e-23
Identities = 62/136 (45%), Positives = 83/136 (60%), Gaps = 8/136 (5%)
Frame = +2
Query: 72 LSNGSLEVSYN----NTTIYTQVIKETETSLSLPSKKNKNK----KKTSSLASSLPLPAI 123
+ G E+S+ N + + + +S P KN+ K K +SS A+ +
Sbjct: 8 MQQGPSEISFELFDINHDFLSFDMVDFSSSSQTPITKNEPKQLMLKSSSSEANEVLQNNT 187
Query: 124 KESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLA 183
K K GVR+RPWGK+AAEIRD+TR G RVWLGTF++ E+AALAYDQAAFS +G A
Sbjct: 188 KMDQKSSYIGVRKRPWGKYAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGYDA 367
Query: 184 VLNFPEDVVKDSLKEM 199
VLNF VK+SL+E+
Sbjct: 368 VLNFSVQRVKESLQEI 415
>TC88498 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive element
binding protein 1 {Glycine max}, partial (45%)
Length = 902
Score = 100 bits (248), Expect = 8e-22
Identities = 63/153 (41%), Positives = 80/153 (52%)
Frame = +3
Query: 101 PSKKNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGT 160
PS K+ N+ T A + P I + K GVRRRPWGKFAAEIRD + GARVWLGT
Sbjct: 183 PSPKSDNESDTIVEAREVNTPPIWKRYK----GVRRRPWGKFAAEIRDPKKNGARVWLGT 350
Query: 161 FNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKI 220
+ TEEEAALAYD+AAF +G A LNFP + D EP
Sbjct: 351 YVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSD-----VFTPEP--------------- 470
Query: 221 KREHIARKSSNEVSKKKIKIDHNGDRTKRETNT 253
++E + ++ S E S + + + R KR T
Sbjct: 471 EKEVVLKRESPEPSSSEESCESSSPRLKRRRGT 569
>TC76841 homologue to GP|8809606|dbj|BAA97157.1 ethylene responsive element
binding factor 5 (ATERF5) {Arabidopsis thaliana},
partial (19%)
Length = 1173
Score = 99.4 bits (246), Expect = 1e-21
Identities = 76/224 (33%), Positives = 113/224 (49%), Gaps = 35/224 (15%)
Frame = +2
Query: 37 FNGDINFKKD---SQSQTKESLLLPLSLY----AESNSSFPL--------LSNGSLEVSY 81
F+ D F+ + SQS++ S + ++ Y E+++ PL + +
Sbjct: 215 FDFDFEFQTNQTASQSESNSSTSISMNQYFTNLLETDAQIPLFEFDTKPQMMEHESPKAL 394
Query: 82 NNTTIYTQVIKETETSLSL---PSKKNKNKKKTSSLASSLPLP---AIKES----NKRVL 131
++ ++Q + TE L PS + KKT + S P P A+ + K+
Sbjct: 395 TSSHPFSQSQRTTEKKPKLARKPSLEIALPKKTEWIQFSKPDPKPEAVVQKPEAVKKQHY 574
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVR+RPWGKFAAEIRD ++G+RVWLGTF T EAA AYD AAF +GS A+LNFP +V
Sbjct: 575 RGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRMRGSKAILNFPLEV 754
Query: 192 VKDSLKEMAINSEPL----------EEGTSPVLAIKRKIKREHI 225
+ E A+ + EE V+ +K +K+E I
Sbjct: 755 NAAAATETAVTAVETTGDGNKKRCREEEEEEVVEVKPVVKKEKI 886
>TC79268 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive element
binding protein 1 {Glycine max}, partial (53%)
Length = 884
Score = 99.0 bits (245), Expect = 2e-21
Identities = 52/94 (55%), Positives = 63/94 (66%)
Frame = +3
Query: 101 PSKKNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGT 160
PS K+ N T+ A + +P + + K GVRRRPWGKFAAEIRD + GARVWLGT
Sbjct: 183 PSPKSDNDLDTTVEAREVSMPPVWKRYK----GVRRRPWGKFAAEIRDPKKNGARVWLGT 350
Query: 161 FNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKD 194
+ TEEEAALAYD+AAF +G A LNFP + D
Sbjct: 351 YVTEEEAALAYDKAAFKMRGRKAKLNFPHLIGSD 452
>TC83854 similar to GP|21554205|gb|AAM63284.1 ethylene response factor ERF1
{Arabidopsis thaliana}, partial (47%)
Length = 598
Score = 99.0 bits (245), Expect = 2e-21
Identities = 64/174 (36%), Positives = 92/174 (52%)
Frame = +2
Query: 14 NLLYFTEDSLSNIYWELEDVVNYFNGDINFKKDSQSQTKESLLLPLSLYAESNSSFPLLS 73
N + + ++++++++++ SQS + E LP + N +L
Sbjct: 5 NTILHRKQNITSVFYKMDSSSTSIPNSSTSDFSSQSSSYEFNYLPFN----ENDPEEMLL 172
Query: 74 NGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRVLRG 133
G + + N + +KE E S S++N+ +K+ S RG
Sbjct: 173 YGMINDANN---LNKTTVKEEEVS----SEENEPRKEKS------------------YRG 277
Query: 134 VRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNF 187
VRRRPWGKFAAEIRDSTR G RVWLGTF++ E AALAYDQAAFS +GS A+L F
Sbjct: 278 VRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEAAALAYDQAAFSMRGSSAILKF 439
>TC86332 similar to GP|7528276|gb|AAF63205.1| AP2-related transcription
factor {Mesembryanthemum crystallinum}, partial (49%)
Length = 1349
Score = 97.1 bits (240), Expect = 7e-21
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Frame = +1
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVR+RPWGKFAAEIRD + GARVWLGTF T E+AALAYD+AA+ +GS A+LNFP
Sbjct: 544 RGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFP--- 714
Query: 192 VKDSLKEMAINS-EPLEEGTSPV-LAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRT 247
+ +NS EP PV +A KR + +S++ +KK+ +G +T
Sbjct: 715 -------LRVNSGEP-----DPVRIASKRSSPERSSSSESNSPAKRKKVMTAQSGLKT 852
>BF647376 similar to GP|7939533|dbj| Nicotiana EREBP-3-like protein
{Arabidopsis thaliana}, partial (52%)
Length = 457
Score = 97.1 bits (240), Expect = 7e-21
Identities = 44/65 (67%), Positives = 51/65 (77%)
Frame = +2
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RG+RRRPWGKFAAEIRD TRKG+R+WLGTF T E+AA AYD AAF +G A+LNFP D
Sbjct: 29 RGIRRRPWGKFAAEIRDPTRKGSRIWLGTFETAEQAARAYDAAAFHFRGHKAILNFPNDF 208
Query: 192 VKDSL 196
S+
Sbjct: 209 SHSSI 223
>TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive element
binding factor-like {Arabidopsis thaliana}, partial
(39%)
Length = 857
Score = 97.1 bits (240), Expect = 7e-21
Identities = 61/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
Frame = +1
Query: 60 SLYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKK-TSSLASSL 118
S +E+++ F L N L T +T KET PSK+ K++ +++ SS
Sbjct: 160 SYISENSTFFTFLENYDLIADMEFFT-HTSSSKETT-----PSKEIKDEVAIATTMVSSK 321
Query: 119 PLPAIKE--SNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAF 176
+ +E R RGVRRRPWGKFAAEIRD +RKG+RVWLGTF+ E +AA AYD AAF
Sbjct: 322 KVKKEEECVDETRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDCEIDAAKAYDSAAF 501
Query: 177 SAKGSLAVLNFP 188
+G A+LNFP
Sbjct: 502 RMRGQKAILNFP 537
>TC76842 similar to GP|8809606|dbj|BAA97157.1 ethylene responsive element
binding factor 5 (ATERF5) {Arabidopsis thaliana},
partial (27%)
Length = 1135
Score = 95.1 bits (235), Expect = 3e-20
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Frame = +1
Query: 126 SNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVL 185
+ K+ RGVR+RPWGKFAAEIRD ++G+RVWLGTF T EAA AYD AAF +GS A+L
Sbjct: 562 AEKQHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRLRGSKAIL 741
Query: 186 NFP----------EDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSN 231
NFP E V+ + K E EE V+ +K +K+E I N
Sbjct: 742 NFPLEVNAVAASAETTVEGNKKRC---REEEEEEEEEVVEVKPVVKKEKITEYDMN 900
>TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein [imported]
- Arabidopsis thaliana, partial (60%)
Length = 709
Score = 94.7 bits (234), Expect = 3e-20
Identities = 42/59 (71%), Positives = 49/59 (82%)
Frame = +1
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPED 190
RG+RRRPWGKFAAEIRD TRKG R+WLGTF+T E+AA AYD AAF +G A+LNFP +
Sbjct: 181 RGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNE 357
>BQ136507 similar to GP|7939534|dbj| ethylene response DNA binding
protein-like {Arabidopsis thaliana}, partial (32%)
Length = 532
Score = 94.0 bits (232), Expect = 6e-20
Identities = 48/78 (61%), Positives = 61/78 (77%)
Frame = -3
Query: 139 WGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKE 198
WGKFAAEIRD+TR G RVWLGTF++ E+AALAYDQAAFS +G+ AVLNF VK+SL+E
Sbjct: 419 WGKFAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGNNAVLNFSVQRVKESLQE 240
Query: 199 MAINSEPLEEGTSPVLAI 216
+ + +G+SP LA+
Sbjct: 239 IQYD---CRKGSSPALAM 195
>TC78789 homologue to PIR|T48580|T48580 hypothetical protein T31B5.150 -
Arabidopsis thaliana, partial (33%)
Length = 1112
Score = 93.6 bits (231), Expect = 7e-20
Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 88 TQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRV--LRGVRRRPWGKFAAE 145
+QVI + T+ + P + S P P + + K+ RGVR+RPWGK+AAE
Sbjct: 223 SQVIGTSSTNHNNPQMAQSISTTMVNEESQPPQPLLDQETKKKPHYRGVRQRPWGKWAAE 402
Query: 146 IRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVK 193
IRD +K ARVWLGTF+T E+AALAYD+AA KG+ A LNFPE VV+
Sbjct: 403 IRDP-KKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFPERVVQ 543
>TC76795 similar to GP|18496063|emb|CAD21849. ethylene responsive element
binding protein {Fagus sylvatica}, partial (32%)
Length = 966
Score = 92.8 bits (229), Expect = 1e-19
Identities = 47/82 (57%), Positives = 55/82 (66%)
Frame = +3
Query: 123 IKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSL 182
+K K RG+R+RPWGK+AAEIRD RKG RVWLGTFNT EEAA AYD A +G
Sbjct: 342 LKRKRKNQYRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNTAEEAARAYDAEARRIRGKK 518
Query: 183 AVLNFPEDVVKDSLKEMAINSE 204
A +NFPE+ S K + NSE
Sbjct: 519 AKVNFPEEAPNASSKRLKTNSE 584
>TC76792 similar to GP|3264767|gb|AAC24587.1| AP2 domain containing protein
{Prunus armeniaca}, partial (49%)
Length = 1729
Score = 92.0 bits (227), Expect = 2e-19
Identities = 61/168 (36%), Positives = 80/168 (47%)
Frame = +3
Query: 37 FNGDINFKKDSQSQTKESLLLPLSLYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETET 96
F D +F +D E LL+ + F SN N ++ +
Sbjct: 321 FKDDSDFDEDEDEDDDEGLLVGVK-------GFTFASN-------KNNKSSKSFVRGSSA 458
Query: 97 SLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARV 156
+ S+ N+ +K S K K RG+R+RPWGK+AAEIRD RKG RV
Sbjct: 459 AKSVALNSNQQAEKDS-----------KRKRKNQYRGIRQRPWGKWAAEIRDP-RKGVRV 602
Query: 157 WLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINSE 204
WLGTFNT EEAA AYD A +G+ A +NFPE+ S K + N E
Sbjct: 603 WLGTFNTAEEAARAYDAEARRIRGNKAKVNFPEEAPVASSKRLKKNPE 746
>BE319790 similar to GP|17979408|gb| putative ethylene reponse factor AP2
domain transcription factor {Arabidopsis thaliana},
partial (21%)
Length = 548
Score = 90.9 bits (224), Expect = 5e-19
Identities = 70/189 (37%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 1 MNFYPPYLKNQNQNLLYFTEDSLSNIYWELEDVVNYFNGDINFKKDSQSQTKESLLLPLS 60
M+F + + Q QNL E+S S + D +FN D N
Sbjct: 52 MDFESSFFQFQYQNLDTSFENSSSFLESFSLDDFFFFNEDNNI----------------- 180
Query: 61 LYAESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPL 120
+N++FP+ N T TQ+ KE+ TS S + N S SS
Sbjct: 181 ----NNNTFPM----------NFTDQNTQIFKESSTSDSNSNTSNSQVSTESQEVSSNST 318
Query: 121 PAIKESN-KRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAK 179
++ S+ KR RGVRRRPWGKFAAEIRDSTR G RVW+GTF+T E AA + ++F K
Sbjct: 319 QLVQSSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAAFSL*SSSFINK 498
Query: 180 G-SLAVLNF 187
LAV F
Sbjct: 499 RIKLAVFEF 525
Score = 33.1 bits (74), Expect = 0.12
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +2
Query: 165 EEAALAYDQAAFSAKGS-LAVLNFPEDVVKD 194
++ LAYDQAA S +GS LNFPE VV++
Sbjct: 455 KQQLLAYDQAALSTRGSNWQCLNFPEHVVRE 547
>AW559374 similar to GP|17381278|gb| AT4g34410/F10M10_180 {Arabidopsis
thaliana}, partial (27%)
Length = 732
Score = 87.4 bits (215), Expect = 5e-18
Identities = 47/80 (58%), Positives = 57/80 (70%)
Frame = +3
Query: 128 KRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNF 187
K+ RGVR+RPWGK+AAEIRD R+ RVWLGTF+T EEAA AYD AA +G A LNF
Sbjct: 291 KKKYRGVRQRPWGKWAAEIRDP-RRATRVWLGTFSTAEEAARAYDNAAIEFRGPRAKLNF 467
Query: 188 PEDVVKDSLKEMAINSEPLE 207
P +V DSLK+ + + LE
Sbjct: 468 P--MVDDSLKQSEVVAPDLE 521
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.310 0.127 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,637,964
Number of Sequences: 36976
Number of extensions: 97703
Number of successful extensions: 692
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of query: 277
length of database: 9,014,727
effective HSP length: 95
effective length of query: 182
effective length of database: 5,502,007
effective search space: 1001365274
effective search space used: 1001365274
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146589.2