TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137824.11 - phase: 0 
         (316 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86217 similar to GP|14488275|dbj|BAB60898. serine palmitoyltra...   559  e-160
BF641437 similar to GP|21450450|gb Putative serine palmitoyltran...   281  3e-76
TC86218 weakly similar to GP|14488275|dbj|BAB60898. serine palmi...   234  2e-62
TC86313 similar to GP|4995890|emb|CAB44316.1 serine palmitoyltra...    95  4e-20
CA917354 GP|490225|emb BIOE {Escherichia coli}, partial (46%)          64  6e-11
BI272653 weakly similar to PIR|E84871|E848 probable polygalactur...    30  1.2
BI264649                                                               28  6.0
TC82414 similar to PIR|T49915|T49915 pre-mRNA splicing factor AT...    27  7.9
TC86934 similar to PIR|T04630|T04630 synaptobrevin homolog F10N7...    27  7.9
BQ144513 similar to GP|995935|gb|AA MAZ {Homo sapiens}, partial ...    27  7.9

>TC86217 similar to GP|14488275|dbj|BAB60898. serine palmitoyltransferase
           {Arabidopsis thaliana}, partial (98%)
          Length = 2027

 Score =  559 bits (1441), Expect = e-160
 Identities = 274/304 (90%), Positives = 290/304 (95%)
 Frame = +2

Query: 1   MASSFINFVNTTIDLVTYALHAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPP 60
           MAS+ +NFVNTT++ VTYAL APSARA+VFG+N GGHLFIEV LLVVILFLLSQKSYKPP
Sbjct: 374 MASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKPP 553

Query: 61  KRPLSNKEIDELCDEWVPQPLIPSLNDEMPYEPPVLESAAGPHTIVNGKEVVNFASANYL 120
           KRPL+NKEIDELCDEWVPQ LIPSL+ +M YEPPVLESAAGPHTIVNGKEV+NFASANYL
Sbjct: 554 KRPLTNKEIDELCDEWVPQSLIPSLDKDMHYEPPVLESAAGPHTIVNGKEVINFASANYL 733

Query: 121 GLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEGRISKFLGTPDSILYSYGLS 180
           GLIGHQKLLDSC+SALEKYGVGSCGPRGFYGTIDVHLDCE RI+KFLGTPDSILYSYGLS
Sbjct: 734 GLIGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 913

Query: 181 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRETLENITSIYK 240
           TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHN+MDSL ETLE +TS YK
Sbjct: 914 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLTSKYK 1093

Query: 241 RTKNLRRYIVIEALYQNSGQIAPLDEIIKLKEKYCFRILLDESNSFGVLGSSGRGLTEHY 300
            TKNLRRYIV+EALYQNSGQIAPLD+IIKLKEKY FRILLDESNSFGVLGSSGRGLTEHY
Sbjct: 1094HTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHY 1273

Query: 301 GVPV 304
           GVPV
Sbjct: 1274GVPV 1285



 Score =  117 bits (294), Expect = 4e-27
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = -3

Query: 1   MASSFINFVNTTIDLVTYALHAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPP 60
           MAS+ +NFVNTT++ VTYAL APSARA+VFG+N GGHLFIEV LLVVILFLLSQKSYKPP
Sbjct: 207 MASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKPP 28

Query: 61  KRPLSNKEI 69
           KRPL+NKEI
Sbjct: 27  KRPLTNKEI 1


>BF641437 similar to GP|21450450|gb Putative serine palmitoyltransferase
           {Oryza sativa (japonica cultivar-group)}, partial (37%)
          Length = 655

 Score =  281 bits (718), Expect = 3e-76
 Identities = 138/151 (91%), Positives = 144/151 (94%)
 Frame = +1

Query: 155 VHLDCEGRISKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSR 214
           VHLDCE RI+KFL TPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSR
Sbjct: 1   VHLDCEARIAKFLRTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSR 180

Query: 215 STVVYFKHNNMDSLRETLENITSIYKRTKNLRRYIVIEALYQNSGQIAPLDEIIKLKEKY 274
           STVVYFKHN+MDSL ETLE ++S YK TKNLRRYIV+EALYQNSGQIAPLD+IIKLKEKY
Sbjct: 181 STVVYFKHNDMDSLEETLEKLSSKYKHTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKY 360

Query: 275 CFRILLDESNSFGVLGSSGRGLTEHYGVPVC 305
            FRILLDESNSFGVLGSSGRGLTEHYGVPVC
Sbjct: 361 RFRILLDESNSFGVLGSSGRGLTEHYGVPVC 453


>TC86218 weakly similar to GP|14488275|dbj|BAB60898. serine
           palmitoyltransferase {Arabidopsis thaliana}, partial
           (26%)
          Length = 997

 Score =  234 bits (598), Expect = 2e-62
 Identities = 113/130 (86%), Positives = 123/130 (93%)
 Frame = +3

Query: 1   MASSFINFVNTTIDLVTYALHAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPP 60
           MAS+ +NFVNTT++ VTYAL APSARA+VFG+N GGHLFIEV LLVVILFLLSQKSYKPP
Sbjct: 606 MASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKPP 785

Query: 61  KRPLSNKEIDELCDEWVPQPLIPSLNDEMPYEPPVLESAAGPHTIVNGKEVVNFASANYL 120
           KRPL+NKEIDELCDEWVPQPLIPSL+ +M YEPPVLESAAGPHTIVNGKEV+NFASANYL
Sbjct: 786 KRPLTNKEIDELCDEWVPQPLIPSLDKDMHYEPPVLESAAGPHTIVNGKEVINFASANYL 965

Query: 121 GLIGHQKLLD 130
           GLIGHQKLLD
Sbjct: 966 GLIGHQKLLD 995


>TC86313 similar to GP|4995890|emb|CAB44316.1 serine palmitoyltransferase
           {Solanum tuberosum}, partial (98%)
          Length = 2052

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 60/195 (30%), Positives = 96/195 (48%), Gaps = 4/195 (2%)
 Frame = +2

Query: 112 VNFASANYLGLIGHQKLLDS-CSSALEKYGVGSCGPRGFYGTIDVHLDCEGRISKFLGTP 170
           +N  S NYLG     +         L+KY   +C  R   GT  +H + E  ++ F+  P
Sbjct: 521 LNLGSYNYLGFAAADEYCTPRVIDTLKKYSPSTCSTRVDGGTTALHNELEECVASFVKKP 700

Query: 171 DSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRE 230
            ++++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN    L E
Sbjct: 701 AALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPSHLEE 880

Query: 231 TL-ENITSIYKRTKN--LRRYIVIEALYQNSGQIAPLDEIIKLKEKYCFRILLDESNSFG 287
            L E I     RT     +  +++E +Y   G++  L E+I + +KY     LDE++S G
Sbjct: 881 VLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEAHSIG 1060

Query: 288 VLGSSGRGLTEHYGV 302
            +G +GRG+ E  GV
Sbjct: 1061AVGKTGRGVCELLGV 1105


>CA917354 GP|490225|emb BIOE {Escherichia coli}, partial (46%)
          Length = 676

 Score = 64.3 bits (155), Expect = 6e-11
 Identities = 39/133 (29%), Positives = 66/133 (49%)
 Frame = -3

Query: 100 AGPHTIVNGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDC 159
           AG   + + ++ +NF+S +YLGL  H +++ +     E++G+GS G     G   VH   
Sbjct: 449 AGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQAL 270

Query: 160 EGRISKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVY 219
           E  ++++LG   ++L+  G +   + I A   K D I AD   H  +     LS S +  
Sbjct: 269 EEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRR 90

Query: 220 FKHNNMDSLRETL 232
           F HN++  L   L
Sbjct: 89  FAHNDVTHLARLL 51


>BI272653 weakly similar to PIR|E84871|E848 probable polygalacturonase
           [imported] - Arabidopsis thaliana, partial (6%)
          Length = 345

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 27/95 (28%), Positives = 44/95 (45%), Gaps = 7/95 (7%)
 Frame = +1

Query: 57  YKPPKRPLS-------NKEIDELCDEWVPQPLIPSLNDEMPYEPPVLESAAGPHTIVNGK 109
           YKPP+RPLS       N  I  +  +W  Q ++  L   + +  PV++SAA       G 
Sbjct: 1   YKPPRRPLSSPNC*KDNYFITSIEAQWPLQRVLLFLFCSLHW--PVMQSAAPKPRPPVGH 174

Query: 110 EVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSC 144
           +V     ++   L+  +KL++  S   +  GV  C
Sbjct: 175 DVFGVRKSSKDVLLPGEKLVNVLSFGAKGDGVTDC 279


>BI264649 
          Length = 678

 Score = 27.7 bits (60), Expect = 6.0
 Identities = 17/60 (28%), Positives = 30/60 (49%), Gaps = 1/60 (1%)
 Frame = +3

Query: 181 TMFSAIPAFSKKGDIIVA-DEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRETLENITSIY 239
           T+ S+ P  S K   +   D G+ +   + +Y  ++   +F    +D LRE+L  + SIY
Sbjct: 159 TVVSSRPVSSGKSHKLTGVDHGMSYHTLHLIYYYKNEEKWFGSFELDPLRESLSEVLSIY 338


>TC82414 similar to PIR|T49915|T49915 pre-mRNA splicing factor ATP-dependent
           RNA helicase-like protein - Arabidopsis thaliana,
           partial (13%)
          Length = 740

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 16/45 (35%), Positives = 18/45 (39%), Gaps = 11/45 (24%)
 Frame = -3

Query: 61  KRPLSNKEIDELCDEWV-----------PQPLIPSLNDEMPYEPP 94
           K P  N E+    D W            P PL PSLN   P+ PP
Sbjct: 474 KNPFLNLELKSAADSWPFFPSPSVYFLSPTPLAPSLNS--PFPPP 346


>TC86934 similar to PIR|T04630|T04630 synaptobrevin homolog F10N7.40 -
           Arabidopsis thaliana, complete
          Length = 1208

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
 Frame = +2

Query: 232 LENITSIYKR------------TKNLRRYIVIEALYQNSGQIAPLDEIIKLKEKYCFRIL 279
           LE++TSIY +               L   ++ +AL Q SG +  +      KEKYC   L
Sbjct: 821 LEDVTSIYLQLWRELPFVFISIVAGLSTCVLAKALQQISGVLGDIFHYRGFKEKYCVSYL 1000

Query: 280 L 280
           L
Sbjct: 1001L 1003


>BQ144513 similar to GP|995935|gb|AA MAZ {Homo sapiens}, partial (3%)
          Length = 1447

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 16/44 (36%), Positives = 22/44 (49%), Gaps = 2/44 (4%)
 Frame = -1

Query: 77  VPQPLIP--SLNDEMPYEPPVLESAAGPHTIVNGKEVVNFASAN 118
           +P P  P  SL   +  +PP +    G  TIVN + V+ F S N
Sbjct: 676 LPTPAFPPTSLISLLNLQPPGVNQKGGALTIVNRRGVLGFPSRN 545


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.141    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,405,493
Number of Sequences: 36976
Number of extensions: 158249
Number of successful extensions: 741
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of query: 316
length of database: 9,014,727
effective HSP length: 96
effective length of query: 220
effective length of database: 5,465,031
effective search space: 1202306820
effective search space used: 1202306820
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)