TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136138.6 - phase: 0 /pseudo
         (339 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86392 weakly similar to GP|8778551|gb|AAF79559.1| F22G5.35 {Ar...    28  3.9

>TC86392 weakly similar to GP|8778551|gb|AAF79559.1| F22G5.35 {Arabidopsis
            thaliana}, partial (29%)
          Length = 1274

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = -2

Query: 80   FYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFS--GKIGIF 137
            FY+ + + R    P   KP+++  +KN +  VM ++++  PR     N+TF+   K  +F
Sbjct: 1090 FYICQSNTR*NNYPSNSKPYQTPATKNSIISVMCISIII-PR---RSNITFNHIRKPALF 923

Query: 138  ---PFVTQEPAKRTS 149
               PF  ++  +R S
Sbjct: 922  ILHPFFQRKSTQRPS 878


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.327    0.140    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,653,114
Number of Sequences: 36976
Number of extensions: 129365
Number of successful extensions: 737
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of query: 339
length of database: 9,014,727
effective HSP length: 97
effective length of query: 242
effective length of database: 5,428,055
effective search space: 1313589310
effective search space used: 1313589310
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)