TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148403.6 - phase: 0 /pseudo
         (1428 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AU089582                                                               56  9e-10
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc...    32  0.70
AV779571                                                               31  1.6
BP058734                                                               30  2.7
BP058026                                                               30  2.7
AV408212                                                               29  4.6
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me...    29  4.6
BP083853                                                               29  6.0

>AU089582 
          Length = 383

 Score = 56.2 bits (134), Expect(2) = 9e-10
 Identities = 32/83 (38%), Positives = 44/83 (52%)
 Frame = +1

Query: 1112 CCPVGRDLYQGDCEVAWCSFEHCVR*RSKIYF*ILEKFARGFGFEVEVEFGVSSADRWSV 1171
            C  +  DL   DC +AWC+  +  R RS I+   LE F+  FG  ++ E+  SS++ WSV
Sbjct: 10   CVSIC*DLLG*DCFLAWCTCVYNFRSRSSIHITFLEVFSNCFGNSIKNEYRFSSSN*WSV 189

Query: 1172 GEDNSVTRGFVENLCS*ARRNLG 1194
             ED S  RG+   LC    R  G
Sbjct: 190  REDYSDLRGYASCLCVXPERXAG 258



 Score = 25.0 bits (53), Expect(2) = 9e-10
 Identities = 18/43 (41%), Positives = 23/43 (52%)
 Frame = +2

Query: 1190 RRNLG*SSSVDRVHIQ**LSF*YWNGTFRGFIWSEMQNSVVLV 1232
            R  LG     D + I **LS *+ +GT    +W EMQ +  LV
Sbjct: 245  RGXLGSVFVFDGIRI***LSV*HLDGTI*SLVW*EMQVTYRLV 373


>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
           factor PosF21 (AtbZIP59), partial (17%)
          Length = 570

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = -1

Query: 313 LLLLILVLHIVLLLSIVFLLWVLIFLI*MERWLSKLQL 350
           +L L+L+LH++L L    L W+L+ L+ +  WL KL L
Sbjct: 234 MLFLLLLLHLLLWL----LYWLLLLLLLLLNWLLKLML 133


>AV779571 
          Length = 538

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/54 (37%), Positives = 37/54 (68%)
 Frame = -2

Query: 304 LAILIILL*LLLLILVLHIVLLLSIVFLLWVLIFLI*MERWLSKLQLRVR*LLL 357
           +A L+I+  LLL +L+L ++LLL ++ +L + I  + M   L K++LR++ LL+
Sbjct: 333 IANLLIIYHLLLSLLLLLLLLLLIVIMILSLTIE*VLML*VLLKMRLRLQQLLI 172


>BP058734 
          Length = 453

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 23/47 (48%), Positives = 32/47 (67%), Gaps = 4/47 (8%)
 Frame = +3

Query: 304 LAILIILL*LLLLILVLHIV-LLLSIVFLL---WVLIFLI*MERWLS 346
           L +L+I   LLLL+L+L +V LLLS + LL    +LIFL+ +  WLS
Sbjct: 225 LCVLLIHRRLLLLLLLLMMVLLLLSFLGLLGGFLMLIFLVILWLWLS 365


>BP058026 
          Length = 389

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/30 (43%), Positives = 26/30 (86%)
 Frame = -2

Query: 303 VLAILIILL*LLLLILVLHIVLLLSIVFLL 332
           + ++L++LL LLLL+L+L ++LLL ++F++
Sbjct: 91  IKSLLLLLLLLLLLLLLLLLLLLLLLLFMI 2



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/27 (51%), Positives = 23/27 (84%)
 Frame = -2

Query: 313 LLLLILVLHIVLLLSIVFLLWVLIFLI 339
           LLLL+L+L ++LLL ++ LL +L+F+I
Sbjct: 82  LLLLLLLLLLLLLLLLLLLLLLLLFMI 2


>AV408212 
          Length = 362

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = -1

Query: 302 EVLAILIILL*LLLLILVLHIVLLLSIVFLLWVLIFLI*MERWLSKLQLRVR*LLL 357
           E+ +I  +LL*L LL+L L ++LLL ++ LL +L+    M      L L V  LLL
Sbjct: 197 EMCSIPTLLL*LWLLLL*LLLLLLLLLLLLLLLLLLESCMPLQQDLLHLHVLLLLL 30


>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
           protein 1, complete
          Length = 1149

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 307 LIILL*LLLLILVLHIVLLLSIVFLLWVLIFLI*MERWL 345
           +I  L*+  L ++ H  L+L  +F  W L  L *M  WL
Sbjct: 862 IIEFL*IFPLCIMFHSTLVLYFIFKNWELFLLC*MNWWL 978


>BP083853 
          Length = 455

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 20/62 (32%), Positives = 33/62 (52%), Gaps = 2/62 (3%)
 Frame = +3

Query: 445 LRIKQ*LIGYRWCVIFLKFFQMRFLMCLQREKLSFLLILSLE--RSRSRWHLIVCLLLSY 502
           L + +  +   +C  F+ +F   F+M LQ+  +   L   LE   S+ + HL+VCLLL  
Sbjct: 213 LEVTEVAVSVAFC--FVCYFLSSFVMPLQQTLMHIWLHQGLEWIHSQLQEHLLVCLLLHA 386

Query: 503 LS 504
           +S
Sbjct: 387 MS 392


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.368    0.165    0.613 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,508,658
Number of Sequences: 28460
Number of extensions: 382074
Number of successful extensions: 5639
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2977
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 2310
Number of HSP's gapped (non-prelim): 3556
length of query: 1428
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1326
effective length of database: 1,994,680
effective search space: 2644945680
effective search space used: 2644945680
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 61 (28.1 bits)