BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146704.8 - phase: 1 /pseudo
(946 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP057998 167 5e-42
BP057316 135 3e-32
BP063299 121 6e-28
BP056393 110 1e-24
BP074539 91 7e-19
TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fr... 77 1e-14
BP054702 77 1e-14
TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance ... 63 2e-10
TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein ... 61 7e-10
AV410283 60 2e-09
TC12204 weakly similar to UP|Q9ZSN3 (Q9ZSN3) NBS-LRR-like protei... 53 2e-07
BP065135 45 7e-05
AV424571 42 5e-04
TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%) 42 5e-04
BP055604 39 0.004
CB827028 39 0.005
BP057104 36 0.033
TC14470 similar to UP|AAQ56728 (AAQ56728) Polygalacturonase inhi... 35 0.072
BG662453 34 0.095
BG662016 34 0.095
>BP057998
Length = 566
Score = 167 bits (424), Expect = 5e-42
Identities = 85/183 (46%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Frame = +2
Query: 73 ERWELLLLPFNHGSFGSKIVVTTREKEVADNVLKSTELFDLQQLDKSNCWSLFVTHAFQG 132
+RW L PF HG GSKI+VTTR EVA +V+++ + F+L QL +CWS+F HA
Sbjct: 20 DRWNQLKKPFQHGMRGSKILVTTRSDEVA-SVVQTGQTFNLSQLSNEDCWSVFANHACLF 196
Query: 133 KSVSEYP-NLESVGRKIVEKCGGLPLAIKSLGQLLRKTFSEHEWINILETDMWRLSKVDH 191
+ E LE +G +IV+KC GLPLA +SLG LLR+ + +W N+L D+W LS+ +
Sbjct: 197 PGLGENTIALEKIGLEIVKKCKGLPLAAQSLGGLLRRKHNIKDWNNVLNCDIWELSESES 376
Query: 192 NVNSVLRLSYHNLPSNLKRCFSYCSIFPKGHKFKKDELIMLWMAEGLLKCCGSNRSEEEF 251
+ LR+SYH LPS LKRCF+Y S++PK ++F+K+++I+LWMAE LL ++ E
Sbjct: 377 KIIPSLRISYHYLPSYLKRCFAYFSLYPKDYEFEKNDVILLWMAEDLLPPPKQGKTLNEV 556
Query: 252 GNE 254
G+E
Sbjct: 557 GDE 565
>BP057316
Length = 494
Score = 135 bits (340), Expect = 3e-32
Identities = 68/164 (41%), Positives = 99/164 (59%)
Frame = +2
Query: 55 LMGKKYLLVLDDIWNGDAERWELLLLPFNHGSFGSKIVVTTREKEVADNVLKSTELFDLQ 114
L GKKYLLVLDD WN ++W L G+ GSK++VTTR + VA + + L
Sbjct: 5 LSGKKYLLVLDDTWNESYQKWTQLRKYLMCGAQGSKVLVTTRSQIVAQTMGVQV-IHVLN 181
Query: 115 QLDKSNCWSLFVTHAFQGKSVSEYPNLESVGRKIVEKCGGLPLAIKSLGQLLRKTFSEHE 174
L W L F+ + +LES+G KI EKC G+PLAI++LG LL+ E E
Sbjct: 182 SLTLEESWGLLKKITFEDDATQVSQSLESIGEKIAEKCRGVPLAIRTLGGLLQSKSEESE 361
Query: 175 WINILETDMWRLSKVDHNVNSVLRLSYHNLPSNLKRCFSYCSIF 218
W+N+L+ D W+L + + ++ VL+LSY NL +++CF+YCS++
Sbjct: 362 WMNVLQGDFWKLCEDEDSIIPVLKLSYQNLSPQIRQCFAYCSLY 493
>BP063299
Length = 580
Score = 121 bits (303), Expect = 6e-28
Identities = 64/170 (37%), Positives = 105/170 (61%)
Frame = +3
Query: 91 IVVTTREKEVADNVLKSTELFDLQQLDKSNCWSLFVTHAFQGKSVSEYPNLESVGRKIVE 150
++V+TR+ +VA+ ++ + + LQ L +++CW LF +AF G + E L ++G++IV+
Sbjct: 54 VLVSTRDMDVAE-IMGTCQAQRLQGLSENDCWLLFKQYAF-GANNEERAELVAIGKEIVK 227
Query: 151 KCGGLPLAIKSLGQLLRKTFSEHEWINILETDMWRLSKVDHNVNSVLRLSYHNLPSNLKR 210
KCGGLPLA ++LG LLR EW + E+ +W L + + L LSY +L L++
Sbjct: 228 KCGGLPLAARALGGLLRLKNEVKEWHEVKESTLWNLPD-ERCILPALMLSYFHLTPTLRQ 404
Query: 211 CFSYCSIFPKGHKFKKDELIMLWMAEGLLKCCGSNRSEEEFGNESFADLV 260
CF++C+IFPK K K++LI LWMA G + N+ E+ GN + + +
Sbjct: 405 CFAFCAIFPKDAKIIKEDLIYLWMANGFISST-KNKEVEDVGNSIWKECI 551
>BP056393
Length = 421
Score = 110 bits (275), Expect = 1e-24
Identities = 57/118 (48%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Frame = +1
Query: 125 FVTHAFQGKSVSEYPNL--ESVGRKIVEKCGGLPLAIKSLGQLLRKTFSEHEWINILETD 182
F +HA G S+ N+ E++GR+IV++C G PL +SLG LLR + NIL ++
Sbjct: 64 FASHA--GISLESTGNMTFETIGRQIVKRCKGSPLXAQSLGGLLRGKHDIRDXNNILNSN 237
Query: 183 MWRLSKVDHNVNSVLRLSYHNLPSNLKRCFSYCSIFPKGHKFKKDELIMLWMAEGLLK 240
+W L + + N+ LR+SYH LP +LKRC YCS+FPK +KF DELI+LWMAE LL+
Sbjct: 238 IWELPENESNIILALRISYHYLPPHLKRCXVYCSLFPKDYKFDXDELILLWMAEDLLE 411
>BP074539
Length = 357
Score = 91.3 bits (225), Expect = 7e-19
Identities = 54/122 (44%), Positives = 75/122 (61%)
Frame = +1
Query: 382 NLKLLRYLDLSYTWIEILPDTICMLHNLQTLLLEGCCELTELPSNFSKLVNLRHLKLPSH 441
+LK L YLDLS+T IE LPD+ C+L+NLQ L L+ C L ELP N KL NLR+L
Sbjct: 1 SLKHLCYLDLSHTNIEKLPDSTCLLYNLQILKLKNCRYLKELPLNLHKLTNLRYLDFSGT 180
Query: 442 NGRPCIKTMPKHTGKLNNLQSLSYFIVEEQNVSDLKELAKLNHLHGAIDIEGLGNVSDLA 501
++ MP H GKL NLQ L+ F V + + ++++L +LN L G + I L N+ +
Sbjct: 181 Q----VRKMPMHFGKLKNLQVLNSFFVGQGSEYNIQQLDELN-LQGTLSISELQNIINPL 345
Query: 502 DS 503
D+
Sbjct: 346 DA 351
Score = 30.0 bits (66), Expect = 1.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 363 LRMLSFRGCGLL-ELVDEISNLKLLRYLDLSYTWIEILPDTICMLHNLQTL 412
L++L + C L EL + L LRYLD S T + +P L NLQ L
Sbjct: 82 LQILKLKNCRYLKELPLNLHKLTNLRYLDFSGTQVRKMPMHFGKLKNLQVL 234
>TC18755 similar to UP|AAN85378 (AAN85378) Resistance protein (Fragment),
complete
Length = 880
Score = 77.4 bits (189), Expect = 1e-14
Identities = 48/176 (27%), Positives = 88/176 (49%), Gaps = 10/176 (5%)
Frame = +3
Query: 1 YNDNKIKEHFELKAWVYVSESFDVVGLTKAILKSFNS--------SADGEDLNLLQHQLQ 52
Y+D + +HF AW+ VS+S ++ L + + + S + + L+ ++
Sbjct: 321 YDDPVVIKHFRACAWITVSQSCEIGELLRDLARQLFSEIRRPVPLGLENMRCDRLKMIIK 500
Query: 53 YMLMGKKYLLVLDDIWNGDAERWELLLLPFNHGSFGSKIVVTTREKEVA--DNVLKSTEL 110
+L ++YL+V DD+W+ WE + + GS+I++TTR ++A + ++
Sbjct: 501 DLLQRRRYLVVFDDVWH--VREWEAVKYALPDNNCGSRIMITTRRSDLAFTSSTESKGKV 674
Query: 111 FDLQQLDKSNCWSLFVTHAFQGKSVSEYPNLESVGRKIVEKCGGLPLAIKSLGQLL 166
++LQ L + W LF F G S + L + I+ KC GLPLAI ++ +L
Sbjct: 675 YNLQPLKEDEAWELFCRKTFHGDSCPSH--LIGICTYILRKCEGLPLAIVAISGVL 836
>BP054702
Length = 528
Score = 77.0 bits (188), Expect = 1e-14
Identities = 40/104 (38%), Positives = 59/104 (56%)
Frame = -3
Query: 834 YFFVCDDFENVESFPKESLLPPTLSYLNLNNCSKLRIMNNEGFLHLKSLEFLYIINCPSL 893
Y F D + + + KE LLP +L +L L N S L+ + G HL SL L+I CPSL
Sbjct: 457 YVFGFGDQDLMNTLLKERLLPTSLVFLGLYNFSSLKFLEGNGLQHLSSLHQLHIDKCPSL 278
Query: 894 ERLPEEALPNSLYSLWIKDCPLIKVKYQKEGGEQRDTICHIPCV 937
LPE+ LP+SL L ++ CPL++ +Y+ G+ + IP +
Sbjct: 277 VSLPEDQLPHSLAVLNLEKCPLLEARYRIRKGKHWSKVSRIPVI 146
Score = 33.5 bits (75), Expect = 0.16
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -3
Query: 774 SSLSF----SLHLFTNLYSLWFVDCPNLDSFPEGGLPCNLLSLTITNCPKLIA 822
SSL F L ++L+ L CP+L S PE LP +L L + CP L A
Sbjct: 361 SSLKFLEGNGLQHLSSLHQLHIDKCPSLVSLPEDQLPHSLAVLNLEKCPLLEA 203
>TC18765 weakly similar to UP|Q9LVT1 (Q9LVT1) Disease resistance
protein-like, partial (18%)
Length = 688
Score = 62.8 bits (151), Expect = 2e-10
Identities = 64/230 (27%), Positives = 111/230 (47%), Gaps = 9/230 (3%)
Frame = +2
Query: 3 DNKIKEHFELKA-WVYVSESFDVVGLTKAILKSFNSSADGEDLNLLQHQLQYMLMGK--- 58
D++++ HF+ + ++ VS+S +V L I F LN Q+M +
Sbjct: 32 DDQVRCHFKERILFLTVSQSPNVEELRAKI---FGHIMGNRGLNANYAVPQWMPQFECQS 202
Query: 59 --KYLLVLDDIWNGDAERWELLLLPFNHGSFGSKIVVTTREKEVADNVLKSTELFDLQQL 116
+ L+VLDD+W+ +L +P G K +V +R K + T +D++ L
Sbjct: 203 QSQILVVLDDVWSLPVLEQLVLRVP------GCKYLVVSRFK--FQRIFNDT--YDVELL 352
Query: 117 DKSNCWSLFVTHAFQGKSVSEYPNLESVGRKIVEKCGGLPLAIKSLGQLLRKTFSEHEWI 176
+ + SLF HAF KS+ N +++ +++V +CG LPLA+K +G LR +E W+
Sbjct: 353 SEGDALSLFCHHAFGHKSIPFGAN-QNLIKQVVAECGRLPLALKVIGASLRDQ-NEMFWL 526
Query: 177 NILETDMWRLS---KVDHNVNSVLRLSYHNLPSNLKRCFSYCSIFPKGHK 223
++ LS + N+ + +S + LP +K CF FP+ K
Sbjct: 527 SVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKVKECFLDLCAFPEDKK 676
>TC18941 weakly similar to UP|Q8GZF0 (Q8GZF0) Resistance protein KR4,
partial (3%)
Length = 569
Score = 61.2 bits (147), Expect = 7e-10
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = +2
Query: 878 HLKSLEFLYIINCPSLERLPEEALPNSLYSLWIKDCPLIKVKYQKEGGEQRDTICHIPCV 937
HL SLE L I P LE LPEE LP+SL L I CPL++ GG++ I HIPC+
Sbjct: 65 HLTSLEKLEICYSPQLESLPEEGLPSSLSVLIIXPCPLLEASCHSHGGKECPKIAHIPCI 244
Query: 938 V 938
+
Sbjct: 245 I 247
Score = 35.0 bits (79), Expect = 0.055
Identities = 22/51 (43%), Positives = 25/51 (48%)
Frame = +2
Query: 780 LHLFTNLYSLWFVDCPNLDSFPEGGLPCNLLSLTITNCPKLIASRQEWGLK 830
L T+L L P L+S PE GLP +L L I CP L AS G K
Sbjct: 59 LQHLTSLEKLEICYSPQLESLPEEGLPSSLSVLIIXPCPLLEASCHSHGGK 211
>AV410283
Length = 426
Score = 60.1 bits (144), Expect = 2e-09
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Frame = +1
Query: 31 ILKSFNSSADGEDLNLLQHQLQYMLMGKKYLLVLDDIWNGDAERWELLLLPFNHGSF--G 88
IL +S D+N ++ +L G K LL+LDD+ E +L L N F G
Sbjct: 10 ILGDLSSGGTVNDVNDGVSAIKRVLQGNKVLLILDDV----DEIQQLDFLMGNREWFHKG 177
Query: 89 SKIVVTTREKEVADNVLKSTELFDLQQLDKSNCWSLFVTHAFQGKSVSEYPNLESVGRKI 148
S++V+TTR +V +++++L+ S +LF HA + K +E ++ ++I
Sbjct: 178 SRVVITTRNTQVLPESYVDM-FYEVRELELSAALALFCHHAMRRKKPAE--GFSNLSKQI 348
Query: 149 VEKCGGLPLAIKSLGQLL 166
V+K GGLPLA++ +G L
Sbjct: 349 VKKTGGLPLALEVIGSFL 402
>TC12204 weakly similar to UP|Q9ZSN3 (Q9ZSN3) NBS-LRR-like protein cD7
(Fragment), partial (3%)
Length = 328
Score = 53.1 bits (126), Expect = 2e-07
Identities = 39/106 (36%), Positives = 51/106 (47%)
Frame = +1
Query: 808 NLLSLTITNCPKLIASRQEWGLKSLKYFFVCDDFENVESFPKESLLPPTLSYLNLNNCSK 867
NL SL +T Q L+SL +C+ N ESFP+ L P ++ L+L C K
Sbjct: 4 NLESLVVTGV-------QLQYLQSLNSLRICN-CPNFESFPEGGLRAPNMTNLHLEKCKK 159
Query: 868 LRIMNNEGFLHLKSLEFLYIINCPSLERLPEEALPNSLYSLWIKDC 913
L+ + L SL L I CP LE +PE P+SL L I C
Sbjct: 160 LKSFPQQMNKMLLSLMTLNIKECPELESIPEGGFPDSLNLLEIFHC 297
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 780 LHLFTNLYSLWFVDCPNLDSFPEGGLPC-NLLSLTITNCPKLIASRQEWGLKSLKYFFV- 837
L +L SL +CPN +SFPEGGL N+ +L + C KL + Q+ L +
Sbjct: 37 LQYLQSLNSLRICNCPNFESFPEGGLRAPNMTNLHLEKCKKLKSFPQQMNKMLLSLMTLN 216
Query: 838 CDDFENVESFPKESLLPPTLSYLNLNNCSKL 868
+ +ES P E P +L+ L + +C+KL
Sbjct: 217 IKECPELESIP-EGGFPDSLNLLEIFHCAKL 306
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 782 LFTNLYSLWFVDCPNLDSFPEGGLPCNLLSLTITNCPKLIASRQEW 827
+ +L +L +CP L+S PEGG P +L L I +C KL +R+ W
Sbjct: 190 MLLSLMTLNIKECPELESIPEGGFPDSLNLLEIFHCAKLFTNRKNW 327
>BP065135
Length = 492
Score = 44.7 bits (104), Expect = 7e-05
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -3
Query: 857 LSYLNLNNCSKLRIMNNEGFLHLKSLEFLYIINCPSLERLPEEALPNSLYSL-WIKDCPL 915
L + L N S L ++ +G L+ L L+I CPSL LPE+A ++ ++ ++ CP
Sbjct: 319 LCFSGLYNFSGLNLLEGKGLQLLRLLHQLHIDQCPSLVALPEDATGHTALAV*SVEKCP* 140
Query: 916 IKVKYQKEGGEQRDTICHIPCV 937
++ +YQ G+ + IP +
Sbjct: 139 LEARYQIGKGKHWSKVSRIPVI 74
>AV424571
Length = 292
Score = 42.0 bits (97), Expect = 5e-04
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 380 ISNLKLLRYLDLSYTWIEILPDTIC-MLHNLQTLLLEGCCELTELPSNFSKLVNLRHL 436
+ +L LRYL L T ++++P + L NL+TL L+ C +TELP++ KL LRHL
Sbjct: 39 VVDLYYLRYLSLRNTKVQMVPGRVLGKLQNLETLDLKRTC-VTELPADIVKLKKLRHL 209
>TC10205 weakly similar to UP|Q8RL77 (Q8RL77) HpaG, partial (10%)
Length = 586
Score = 42.0 bits (97), Expect = 5e-04
Identities = 24/65 (36%), Positives = 39/65 (59%), Gaps = 1/65 (1%)
Frame = +3
Query: 374 LELVDEISNLKLLRYLDLS-YTWIEILPDTICMLHNLQTLLLEGCCELTELPSNFSKLVN 432
LEL I+NL+ +++LD+S + LP+ + L L+ L + GC LTELP++ L N
Sbjct: 3 LELPKSITNLEQVQFLDISDCISLSHLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLEN 182
Query: 433 LRHLK 437
L ++
Sbjct: 183 LEEVE 197
>BP055604
Length = 464
Score = 38.9 bits (89), Expect = 0.004
Identities = 23/60 (38%), Positives = 33/60 (54%), Gaps = 1/60 (1%)
Frame = -3
Query: 879 LKSLEFLYIINCPSLERLPEEALP-NSLYSLWIKDCPLIKVKYQKEGGEQRDTICHIPCV 937
L SL +L I CP L LP+ ++L L I+ CP +K + ++ GE D I H+P V
Sbjct: 453 LHSLRYLRIWGCPGLRSLPDGFQHLSALERLIIEGCPELKERCKEGTGEDWDKIAHVPDV 274
>CB827028
Length = 572
Score = 38.5 bits (88), Expect = 0.005
Identities = 43/183 (23%), Positives = 79/183 (42%), Gaps = 7/183 (3%)
Frame = +2
Query: 113 LQQLDKSNCWSLFVTHAFQGKSVSEYPNLESVGRKIVEKCGGLPLAIKSLGQLLRKTFSE 172
L++L SLF+ A + +E P S+ +KIV+ C P+A+ G L+
Sbjct: 47 LERLSLDYATSLFLHSASLSPNSTEIP--VSLVKKIVKGCKRSPIALTVTGTSLK----- 205
Query: 173 HEWINILETDMWRLSK------VDHNVNSVLRLSYHNLPSNLKRCFSYCSIFPKGHKFKK 226
++ + + + LSK +H+V + L+ S L CF +FP+ +
Sbjct: 206 NKNLAVWRSRAKALSKGQSILESNHDVLTCLQKSLDVLDPIAIECFKDLGLFPEDQRIPA 385
Query: 227 DELIMLWMAEGLLKCCGSNRSEEEFGNESFADLVSISFFQQSFDEIYDTYEHYV-MHDLV 285
L+ +W L+C + E+ ++ I ++ ++I D HYV H L+
Sbjct: 386 AALVDMWAE---LRCGDDETAMEKIYELVNLNMADIFVTRKVANDIVDYNYHYVAQHGLL 556
Query: 286 NDL 288
+L
Sbjct: 557 REL 565
>BP057104
Length = 496
Score = 35.8 bits (81), Expect = 0.033
Identities = 22/63 (34%), Positives = 35/63 (54%)
Frame = -3
Query: 376 LVDEISNLKLLRYLDLSYTWIEILPDTICMLHNLQTLLLEGCCELTELPSNFSKLVNLRH 435
L+ ++ + L++LDLS+ + +PD I LH+L+ L L G LP + +L LR
Sbjct: 341 LLPDLPHFSCLQHLDLSFCNLRQVPDAIGWLHSLEDLDLGG-NNFISLPPSIKELSKLRV 165
Query: 436 LKL 438
L L
Sbjct: 164 LNL 156
Score = 33.5 bits (75), Expect = 0.16
Identities = 33/108 (30%), Positives = 50/108 (45%), Gaps = 3/108 (2%)
Frame = -3
Query: 321 SNSVDKLLELTCEGLHSLILEGTRAMLISNNVQQDLFSRLNFLRMLSFRGCGLLELVDEI 380
++S+ K+L L E ++S E + +L+ + + L+ L C L ++ D I
Sbjct: 419 TSSLYKVLTLPFEFMYSRRREDSIGLLLPD------LPHFSCLQHLDLSFCNLRQVPDAI 258
Query: 381 SNLKLLRYLDLSYTWIEILPDTICMLHNLQTLLLEGCCEL---TELPS 425
L L LDL LP +I L L+ L LE C +L ELPS
Sbjct: 257 GWLHSLEDLDLGGNNFISLPPSIKELSKLRVLNLEHCKQLRYFPELPS 114
Score = 28.1 bits (61), Expect = 6.8
Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 11/52 (21%)
Frame = -3
Query: 853 LPPT------LSYLNLNNCSKLRIM-----NNEGFLHLKSLEFLYIINCPSL 893
LPP+ L LNL +C +LR +G++ + LYI NCP L
Sbjct: 203 LPPSIKELSKLRVLNLEHCKQLRYFPELPSRTQGWVVRRPHAGLYIFNCPKL 48
>TC14470 similar to UP|AAQ56728 (AAQ56728) Polygalacturonase inhibiting
protein, partial (93%)
Length = 1195
Score = 34.7 bits (78), Expect = 0.072
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Frame = +3
Query: 345 AMLISNNVQQDLFSR--------LNFLRMLSFRGCGLLE--LVDEISNLKLLRYLDLSYT 394
+++IS++V + FS L +L++L F L + I+ L LR+L L++T
Sbjct: 207 SLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWLILTWT 386
Query: 395 WIE-ILPDTICMLHNLQTLLLEGCCELTELPSNFSKLVNLRHLKL 438
I +PD + L NLQ L L +PS+ SKL NL L+L
Sbjct: 387 NISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRL 521
>BG662453
Length = 460
Score = 34.3 bits (77), Expect = 0.095
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Frame = +2
Query: 354 QDLFSRLNFLRMLSFRGCGLLELVDEISNLKLLRYLDLSYTWIEILPDTICMLHNLQTLL 413
+ L +RL + +L L L + + L L+ L++S IE LP +I
Sbjct: 17 ESLTARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNLIEYLPKSI---------- 166
Query: 414 LEGCCELTELPSNFSK-----------LVNLRHLKLPSHNGRPCIKTMPKHTGKLNNLQS 462
E C L EL +NF+K L+NL+ L + S+ + +P+ T L +L+
Sbjct: 167 -ENCRALEELNANFNKLSQLPDTMGFELLNLKKLSVNSNK----LVFLPRSTSHLTSLKI 331
Query: 463 LSYFIVEEQNVSDLKELAKLNHLHG-AIDIEGLGNVSDLADSATVNLKDT 511
L A+LN L D+E L N+ L S DT
Sbjct: 332 LD---------------ARLNCLRSLPDDLENLINLETLNVSQNFQYLDT 436
>BG662016
Length = 459
Score = 34.3 bits (77), Expect = 0.095
Identities = 34/122 (27%), Positives = 51/122 (40%), Gaps = 30/122 (24%)
Frame = +1
Query: 373 LLELVDEISNLKLLRYLDLSYTWIEILPDTICMLHNLQTLLLEGCCELTELPSNFSK--- 429
L L + I L L+ L++S +IE LP TI E C L EL +NF+K
Sbjct: 25 LTSLPNSIGCLSKLKLLNVSGNFIESLPKTI-----------ENCSALEELNANFNKLSK 171
Query: 430 --------LVNLRHLK--------LPSHNGR-----------PCIKTMPKHTGKLNNLQS 462
L+NL+ L LPS C++ +P++ L NL++
Sbjct: 172 LPDTIGFELINLKKLAVNSNKLVLLPSSTSHLTALTVLDARLNCLRALPENLENLINLET 351
Query: 463 LS 464
L+
Sbjct: 352 LN 357
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.321 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,121,898
Number of Sequences: 28460
Number of extensions: 302941
Number of successful extensions: 1688
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of query: 946
length of database: 4,897,600
effective HSP length: 99
effective length of query: 847
effective length of database: 2,080,060
effective search space: 1761810820
effective search space used: 1761810820
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146704.8