BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146559.13 - phase: 0 /pseudo
(661 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP054460 166 1e-41
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 51 7e-07
BP030058 49 2e-06
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 49 3e-06
TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding p... 48 6e-06
TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein... 48 6e-06
TC13588 similar to UP|GRP2_PHAVU (P10496) Glycine-rich cell wall... 47 7e-06
TC18988 similar to UP|FUS_MOUSE (P56959) RNA-binding protein FUS... 47 7e-06
TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-bindi... 47 7e-06
TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,... 47 7e-06
TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding l... 46 2e-05
TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ki... 45 4e-05
TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich ... 45 5e-05
AV769326 45 5e-05
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 45 5e-05
TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precu... 44 6e-05
TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%) 44 8e-05
BP038942 44 1e-04
TC10682 similar to PIR|A86408|A86408 FH protein interacting prot... 44 1e-04
AV410227 43 1e-04
>BP054460
Length = 561
Score = 166 bits (419), Expect = 1e-41
Identities = 89/156 (57%), Positives = 109/156 (69%), Gaps = 7/156 (4%)
Frame = +2
Query: 56 NLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSP 115
NL TLSSL NLL S IL TP T TNLI C FNP+HL+PP SLFLHHL CPSSP
Sbjct: 95 NLQMTLSSLNNLLDVSNHILPITP---TLNTNLIQCPFNPHHLVPPSSLFLHHLGCPSSP 265
Query: 116 RPLPHIDHLLTSLSYPKTLQNPTSIHLSSYLDF-TNFFYNNCPGVVTFSDANSVAQTATF 174
RPLP+ + LL +LSYPK+L NP S+ LSSYL+ +N Y +CPGVV+FS+ ++VA+TATF
Sbjct: 266 RPLPNPNDLLHTLSYPKSLHNPQSLQLSSYLNSPSNLLYRDCPGVVSFSNLDTVARTATF 445
Query: 175 HLPDFLSRECSTVCSPTPNHK------PSPIVPSEY 204
LPDFLSREC + N + P++PSE+
Sbjct: 446 ALPDFLSRECEDRHTGNSNSENVYVSAVVPVLPSEH 553
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 50.8 bits (120), Expect = 7e-07
Identities = 33/86 (38%), Positives = 39/86 (44%)
Frame = +2
Query: 19 TMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTT 78
T P PA PPP+ PPP SPPP PPP PPP L T T+ ++ S +
Sbjct: 383 TPPPAPASTPPPAS-PPPFSPPPATPPPPAATPPPAL----TPVPATSPAPAPAKVKSKS 547
Query: 79 PQPQTPTTNLIPCLFNPNHLIPPPSL 104
P P P L P + P PSL
Sbjct: 548 PAP-APAPALAPVVSLSPSEAPGPSL 622
Score = 46.6 bits (109), Expect = 1e-05
Identities = 33/90 (36%), Positives = 39/90 (42%), Gaps = 4/90 (4%)
Frame = +2
Query: 19 TMNPPPAQL-PPPSQLPPP---LSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQI 74
T PP AQ PPP+Q PP SPPP PPP PPP++ + S T
Sbjct: 236 TPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQS-----TPPPAP 400
Query: 75 LSTTPQPQTPTTNLIPCLFNPNHLIPPPSL 104
ST P P + P P PPP+L
Sbjct: 401 ASTPPPASPPPFSPPPATPPPPAATPPPAL 490
Score = 40.8 bits (94), Expect = 7e-04
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +2
Query: 18 PTMNPPPAQLPPPSQLPPPLS----PPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQ 73
PT +P P P P+ PP + PP Q PPP+ PPP + S ++
Sbjct: 203 PTTSPAP---PTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPP 373
Query: 74 ILST-TPQPQTPTTNLIPCLFNPNHLIPPP 102
+ ST P P + P F+P PPP
Sbjct: 374 VQSTPPPAPASTPPPASPPPFSPPPATPPP 463
Score = 36.6 bits (83), Expect = 0.013
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = +2
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPP 53
P +PPP PP + PP +PPP P P P P
Sbjct: 413 PPASPPPFSPPPATPPPPAATPPPALTPVPATSPAP 520
>BP030058
Length = 455
Score = 49.3 bits (116), Expect = 2e-06
Identities = 34/96 (35%), Positives = 41/96 (42%)
Frame = -1
Query: 22 PPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQP 81
PPP+ PPP LP P SPPP PPP PPPPP + P P
Sbjct: 401 PPPSPSPPPPPLPCP-SPPP---PPPSPPPPPP---------------------PSPPPP 297
Query: 82 QTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRP 117
+ P+ C N N L PPP ++ P P+P
Sbjct: 296 KYPS-----CPQNCNPLSPPPPRIIY---VPGQPKP 213
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPP 53
P+ +PPP LP PS PPP SPPP PPP PPPP
Sbjct: 395 PSPSPPPPPLPCPSPPPPPPSPPP---PPPPSPPPP 297
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPP------PLLPPPP 53
P +PPP PP PPP SPPP ++P PL PPPP
Sbjct: 365 PCPSPPPPPPSPPP--PPPPSPPPPKYPSCPQNCNPLSPPPP 246
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 48.5 bits (114), Expect = 3e-06
Identities = 46/149 (30%), Positives = 54/149 (35%), Gaps = 16/149 (10%)
Frame = +3
Query: 18 PTMNPPPAQLPPPS-----QLPPPLSP---------PPQQHPPPLLPPPPPLNLNTTLSS 63
P PP PPPS LPPP P P HP P LP P + T S+
Sbjct: 57 PIQTTPPPPPPPPSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSLPSPSSAAVGPTSST 236
Query: 64 LTNLLTFSTQILS--TTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRPLPHI 121
T + S T P P P T+ P PPPS + SSP P
Sbjct: 237 PPTSPTSAAAATSSATPPSPSPPPTSASP---------PPPSSTPNGTPPSSSPATTP-- 383
Query: 122 DHLLTSLSYPKTLQNPTSIHLSSYLDFTN 150
S S P T +PT L S F++
Sbjct: 384 -----SPSRPSTPSSPTRASLPSAPGFSS 455
Score = 33.1 bits (74), Expect = 0.15
Identities = 35/114 (30%), Positives = 40/114 (34%), Gaps = 6/114 (5%)
Frame = +3
Query: 37 LSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLT--FSTQILSTTPQPQTPTTNLIPCLFN 94
L P Q PPP PPP P + N LT FST ++ P P P+ +
Sbjct: 48 LVSPIQTTPPPPPPPPSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSLPSPS--SAAVG 221
Query: 95 PNHLIPPPS----LFLHHLRCPSSPRPLPHIDHLLTSLSYPKTLQNPTSIHLSS 144
P PP S P SP P P TS S P P SS
Sbjct: 222 PTSSTPPTSPTSAAAATSSATPPSPSPPP------TSASPPPPSSTPNGTPPSS 365
Score = 31.6 bits (70), Expect = 0.43
Identities = 22/67 (32%), Positives = 26/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 22 PPPAQLPPPSQLPPPLSPPPQQHPPPLLP--PPPPLNLNTTLSSLTNLLTFSTQILSTTP 79
PP PP S PPP S P PP P P P +T S L + S+
Sbjct: 285 PPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPSRPSTPSSPTRASLPSAPGFSSSEE 464
Query: 80 QPQTPTT 86
P+ TT
Sbjct: 465 TPRCGTT 485
>TC14758 similar to UP|O24601 (O24601) Glycine-rich RNA binding protein 2,
partial (93%)
Length = 725
Score = 47.8 bits (112), Expect = 6e-06
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILST 77
P PP + PPP PP PPP +PPP PPPPP S F+ + +
Sbjct: 440 PPPPPP*PRDPPPPPYPPSRRPPPPPYPPPPRPPPPPPPPRAWAS-------FTVMLRPS 282
Query: 78 TPQPQTPTTNLIPC-----LFNPNHLIPPPSLFLHHLRCPSSP 115
+ P P+ L+ + NPN L P S L L SP
Sbjct: 281 SSLPFIPSIALLIASSEVKVTNPNPLDLPVSRSLTTLESMISP 153
Score = 45.8 bits (107), Expect = 2e-05
Identities = 41/136 (30%), Positives = 52/136 (38%), Gaps = 7/136 (5%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILST 77
P PPP+ PPS+ PP PPP +PPP PPP P +
Sbjct: 521 P*REPPPSPPYPPSRRPP*PPPPPPPYPPP--PPP*PRD--------------------P 408
Query: 78 TPQPQTPTTNLIPCLFNPNHLIPPP-------SLFLHHLRCPSSPRPLPHIDHLLTSLSY 130
P P P+ P + P PPP + F LR SS +P I L+ S
Sbjct: 407 PPPPYPPSRRPPPPPYPPPPRPPPPPPPPRAWASFTVMLRPSSSLPFIPSIALLIASSEV 228
Query: 131 PKTLQNPTSIHLSSYL 146
T NP + +S L
Sbjct: 227 KVTNPNPLDLPVSRSL 180
Score = 30.8 bits (68), Expect = 0.73
Identities = 20/67 (29%), Positives = 29/67 (42%), Gaps = 3/67 (4%)
Frame = -2
Query: 541 KVVHDATSRDYEQR--KQGHQGSHHHGGDERGTDQENHRSHASTSPERHRSRSRS-HEHR 597
+V ++S + +R ++ H GSHHH D ++ RHR SR H HR
Sbjct: 577 RVNKQSSSSSFHRRHHRRCHSGSHHHHHHIHLHDDHHNHRRLLLHIHRHRLHSREIHRHR 398
Query: 598 VHHEKQD 604
H D
Sbjct: 397 HIHLHDD 377
Score = 28.1 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 32 QLPPPLSPPPQQHPPPLLPPPPP 54
Q PPP PP PP PP PP
Sbjct: 551 QFPPPPPPPLP*REPPPSPPYPP 483
>TC12500 similar to GB|AAH45354.1|28279536|BC045354 FNBP4 protein {Danio
rerio;} , partial (5%)
Length = 678
Score = 47.8 bits (112), Expect = 6e-06
Identities = 49/147 (33%), Positives = 57/147 (38%), Gaps = 36/147 (24%)
Frame = +1
Query: 21 NPPPAQLPPPSQLPPPLSPP----------------PQQHPPPLLPPPPPLNLNTT---- 60
+PPP Q PPPS LPP PP P P P PPPPP T
Sbjct: 187 SPPPPQPPPPS-LPPTTPPPASVIAGSAIMSGEASFPCSLPSPPQPPPPPPKYGVTTIPP 363
Query: 61 ----LSSLTN---LLTFSTQILS-TTPQPQTPTTNL--IPCLFNPNHLIPPPSLFLHHLR 110
L S T+ L ST + S TTP P + T + P P PPP + +
Sbjct: 364 SPPLLMSATDRAPLPPPSTHLTSLTTPSPPSSRTTITQTPLPSPPQPPSPPPKYGVATIP 543
Query: 111 CPSSP------RPLPHIDHLLTSLSYP 131
P P PLP + LTSL P
Sbjct: 544 PPPLPMSSIDRTPLPLLSTPLTSLDAP 624
Score = 46.6 bits (109), Expect = 1e-05
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 22/141 (15%)
Frame = +1
Query: 22 PPPAQLPPPS--------------------QLPPPLSPPPQQHPPPLLPP--PPPLNLNT 59
PPP PPPS LP SPPP Q PPP LPP PPP ++
Sbjct: 88 PPP---PPPSAPFIAGSAIISKVSKSVGDVSLPCSPSPPPPQPPPPSLPPTTPPPASVIA 258
Query: 60 TLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRPLP 119
+ ++ +F L + PQP P P + + P P L L + PLP
Sbjct: 259 GSAIMSGEASFPCS-LPSPPQPPPP-----PPKYGVTTIPPSPPL----LMSATDRAPLP 408
Query: 120 HIDHLLTSLSYPKTLQNPTSI 140
LTSL+ P + T+I
Sbjct: 409 PPSTHLTSLTTPSPPSSRTTI 471
Score = 36.6 bits (83), Expect = 0.013
Identities = 30/88 (34%), Positives = 37/88 (41%), Gaps = 4/88 (4%)
Frame = +1
Query: 19 TMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLP----PPPPLNLNTTLSSLTNLLTFSTQI 74
T PP+ +Q P P SPP PPP PPPPL +++ T L ST +
Sbjct: 436 TTPSPPSSRTTITQTPLP-SPPQPPSPPPKYGVATIPPPPLPMSSI--DRTPLPLLSTPL 606
Query: 75 LSTTPQPQTPTTNLIPCLFNPNHLIPPP 102
S P TPT + P PPP
Sbjct: 607 TSLDAPPPTPTLSPPP---------PPP 663
Score = 32.3 bits (72), Expect = 0.25
Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 22/145 (15%)
Frame = +1
Query: 22 PP--PAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNL-----NTTLSSLTNLL-TFSTQ 73
PP P + LPPP +PP P PPPPP + + +S ++ + S
Sbjct: 4 PPSTPMSSADRAPLPPPSTPPKSLKALP--PPPPPPSAPFIAGSAIISKVSKSVGDVSLP 177
Query: 74 ILSTTPQPQTPTTNLIPCLFNPNHLIPPPSL------FLHHLRCPSSPRPLPHIDHLLTS 127
+ P PQ P +L P P +I ++ F L P P P P + T
Sbjct: 178 CSPSPPPPQPPPPSLPPTTPPPASVIAGSAIMSGEASFPCSLPSPPQPPPPPPKYGVTTI 357
Query: 128 LSYPKTLQN--------PTSIHLSS 144
P L + P S HL+S
Sbjct: 358 PPSPPLLMSATDRAPLPPPSTHLTS 432
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 11/47 (23%)
Frame = +1
Query: 19 TMNPPPAQLPPPSQLPPPL-----------SPPPQQHPPPLLPPPPP 54
T+ PPP + + P PL P P PPP PP PP
Sbjct: 535 TIPPPPLPMSSIDRTPLPLLSTPLTSLDAPPPTPTLSPPPPPPPTPP 675
>TC13588 similar to UP|GRP2_PHAVU (P10496) Glycine-rich cell wall structural
protein 1.8 precursor (GRP 1.8), partial (6%)
Length = 517
Score = 47.4 bits (111), Expect = 7e-06
Identities = 42/110 (38%), Positives = 51/110 (46%)
Frame = -3
Query: 34 PPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLF 93
PPP P P PPP PPPPP + + L SLT+ T L+TT +N P F
Sbjct: 440 PPP--PCPSIPPPP--PPPPPPHQDLYLHSLTH-----THTLTTTTTTNHHHSNNKPFQF 288
Query: 94 NPNHLIPPPSLFLHHLRCPSSPRPLPHIDHLLTSLSYPKTLQNPTSIHLS 143
P L P+L +HHL S+ PLP + S PK L I LS
Sbjct: 287 APQTL-NSPNLTIHHLTTISTLSPLP---PAAAAPSLPKGLDPSPPILLS 150
>TC18988 similar to UP|FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen
protein), partial (3%)
Length = 425
Score = 47.4 bits (111), Expect = 7e-06
Identities = 28/67 (41%), Positives = 36/67 (52%)
Frame = +1
Query: 1 QQKHFKILELKNKALH*PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTT 60
Q +HF+ L L+ + ++ P ++ PPS LPPP SPP PPPPPL L
Sbjct: 70 QHRHFQTLSLRLWTMI--GISTPSSEAAPPSPLPPPPSPP---------PPPPPLFLPLL 216
Query: 61 LSSLTNL 67
L LTNL
Sbjct: 217 LGVLTNL 237
Score = 27.3 bits (59), Expect = 8.0
Identities = 24/89 (26%), Positives = 31/89 (33%), Gaps = 7/89 (7%)
Frame = +1
Query: 18 PTMNPPPAQLPPPSQLPPPLS-------PPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTF 70
P +PPP PPP LP L PPP P PLN L + +
Sbjct: 166 PPPSPPPP--PPPLFLPLLLGVLTNLHLPPPSSQQAKFCPFQTPLNQRVPLVDFMSYASL 339
Query: 71 STQILSTTPQPQTPTTNLIPCLFNPNHLI 99
S+ L+ L +PN L+
Sbjct: 340 SSS-----------NHRLLLSLIHPNRLL 393
>TC15523 similar to UP|GRPA_MAIZE (P10979) Glycine-rich RNA-binding,
abscisic acid-inducible protein, complete
Length = 972
Score = 47.4 bits (111), Expect = 7e-06
Identities = 37/124 (29%), Positives = 51/124 (40%), Gaps = 5/124 (4%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILST 77
P + P P PP +LPPP PP + PPP PPPPP +S F+ + +
Sbjct: 717 PPLPP*PPPPPPL*RLPPPPPYPPSRRPPPYPPPPPPPPRPRAWAS------FTVTLRPS 556
Query: 78 TPQPQTPT-TNLIPC----LFNPNHLIPPPSLFLHHLRCPSSPRPLPHIDHLLTSLSYPK 132
P P+ + I C + NPN L P S C P+ + L T + P+
Sbjct: 555 MSWPFIPSIASFIDCSDANVTNPNPLDLPVS--RSFTTCTQKPKSASDLTKLSTKTTNPE 382
Query: 133 TLQN 136
N
Sbjct: 381 PNSN 370
Score = 41.2 bits (95), Expect = 5e-04
Identities = 26/58 (44%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Frame = -1
Query: 7 ILELKNKALH*PTMNPPPA--QLPPPSQLPPPLSPPPQQHP-------PPLLPPPPPL 55
I+E KN * PP PPPS+LPP PPP + P PP PPPPPL
Sbjct: 852 IIETKNIIKL*SLQLPPLE*RDPPPPSRLPP*PPPPPSRRPPYPPPPLPP*PPPPPPL 679
Score = 29.6 bits (65), Expect = 1.6
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = -2
Query: 544 HDATSRDYEQRKQGHQGSHHHGGDERGT-----DQENHRSHASTSPERHRSRSRSHEHR- 597
H +S + + + H HHH D+R HR H H +HR
Sbjct: 806 HR*SSEIHRRLRDCHHNHHHHLHDDRRILLLRYHHSLHRHHRYNGYHHHHRIHLHDDHRR 627
Query: 598 VHHEKQDYSGRK 609
+HH ++ GR+
Sbjct: 626 IHHHRRRLHGRE 591
>TC8093 homologue to UP|EFTU_TOBAC (P41342) Elongation factor Tu,
chloroplast precursor (EF-Tu), partial (58%)
Length = 1146
Score = 47.4 bits (111), Expect = 7e-06
Identities = 43/128 (33%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Frame = +2
Query: 21 NPPPAQLPPPSQLPPPLSPPPQQHPPP----LLPPPPPLNLNTTLSSLTNLLTFSTQILS 76
N PP PPPS LP S + +PPP PP P L + S+ + T + S
Sbjct: 203 NYPPPTSPPPSILPQSSSTRRRNNPPPPSTAAPPPSPSAPLAASSSARNPMSTSAPSATS 382
Query: 77 TTPQPQTPTTNLIPCLFNPNHLIPP-------PSLFLHHLRCPSSPRP---LPHIDHLLT 126
TT +P +P + P L P+ PP P L PS+P P P I +LT
Sbjct: 383 TTAKPPSPPPSPWPSL--PSETAPPRNTTKSTPPLKSALAVSPSTPPPSSTRPRIATMLT 556
Query: 127 SLSYPKTL 134
L+ P TL
Sbjct: 557 -LTAPATL 577
Score = 31.2 bits (69), Expect = 0.56
Identities = 24/72 (33%), Positives = 29/72 (39%)
Frame = +3
Query: 49 LPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHH 108
+PPP P + +LS L L P PQTP T+ P L + PP
Sbjct: 129 IPPPTPFSFFLSLSLLFPL-----------PLPQTPITHHPPLLLLQSFHNPPQRAAATT 275
Query: 109 LRCPSSPRPLPH 120
LR P LPH
Sbjct: 276 LRPLPPPLLLPH 311
>TC9118 similar to UP|Q84JE4 (Q84JE4) Squamosa promoter binding
like-protein, partial (16%)
Length = 779
Score = 45.8 bits (107), Expect = 2e-05
Identities = 45/224 (20%), Positives = 83/224 (36%), Gaps = 1/224 (0%)
Frame = +2
Query: 416 HQQHSHHQETQKEKTREELLAEERDYKRRRMSYRGKKRNQSTIQVMRDLIGEYMEEIKLA 475
H++ +E ++E+ RE++ RD+KR R +R + + ++ RD
Sbjct: 14 HEEEEEEEEEEEEEKREDV----RDHKRSRKKHRSHRSSHTSRDRDRD------------ 145
Query: 476 AGVKSPVNVSEDSGMPPPPPKLLSSHTISTEANNSREVSHDSPAVTISNPDHHEQQSHTN 535
K H+ S + + R H IS+ +H H
Sbjct: 146 ------------------GRKHKRRHSSSKDKYSYRGAKHG-----ISDDEHQHSSHHHK 256
Query: 536 YSDKSKVVHDATSRDYEQRKQGHQGSHHHGGDERGTDQENHRSHASTSPER-HRSRSRSH 594
Y S H ++ R ++++ H H R H+ S+ ER HRSR H
Sbjct: 257 YDSSSDEKHRSSRR---RQREDSMSDHEHKHSRR------HKHETSSEDERRHRSRHTKH 409
Query: 595 EHRVHHEKQDYSGRKKYNNSSRTKDRWQNDTHKNHTSDSFSRSD 638
+ R H E++ + S +++ + + S S S ++
Sbjct: 410 KSRSHVERESELEEGEVMKSDKSQQASEVERASREPSASLSNAN 541
Score = 45.1 bits (105), Expect = 4e-05
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Frame = +2
Query: 528 HEQQSHTNYSDKSKVVHDATSRDYEQRKQGHQGSHH--HGGDERGTDQENHRSHASTSPE 585
HE++ ++ + D RD+++ ++ H+ SH H +R D H+ S+S +
Sbjct: 14 HEEEEEEEEEEEEEKREDV--RDHKRSRKKHR-SHRSSHTSRDRDRDGRKHKRRHSSSKD 184
Query: 586 RHRSRSRSH-------EHRVHHEKQDYSGRKKYNNSSR--TKDRWQNDTHKNHTSDSFSR 636
++ R H +H HH K D S +K+ +S R +D + HK+
Sbjct: 185 KYSYRGAKHGISDDEHQHSSHHHKYDSSSDEKHRSSRRRQREDSMSDHEHKHSRRHKHET 364
Query: 637 SDPSESRGVGEH 648
S E R H
Sbjct: 365 SSEDERRHRSRH 400
Score = 38.1 bits (87), Expect = 0.005
Identities = 25/98 (25%), Positives = 42/98 (42%)
Frame = +2
Query: 559 QGSHHHGGDERGTDQENHRSHASTSPERHRSRSRSHEHRVHHEKQDYSGRKKYNNSSRTK 618
+ S H +E ++E + +R R + RSH +D GRK S +K
Sbjct: 2 RSSRHEEEEEEEEEEEEEKREDVRDHKRSRKKHRSHRSSHTSRDRDRDGRKHKRRHSSSK 181
Query: 619 DRWQNDTHKNHTSDSFSRSDPSESRGVGEHDISSDDKY 656
D++ K+ SD + S ++D SSD+K+
Sbjct: 182 DKYSYRGAKHGISD----DEHQHSSHHHKYDSSSDEKH 283
>TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(15%)
Length = 606
Score = 45.1 bits (105), Expect = 4e-05
Identities = 26/74 (35%), Positives = 35/74 (47%)
Frame = -3
Query: 14 ALH*PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQ 73
AL+ P ++ PPP PP PPP P P PP PP + T SS + + S+
Sbjct: 373 ALYTPACLRHSSKTPPPPPPAPPQIPPPSSPPSPSSPPSPPASAP*TPSSP*SSNSASSP 194
Query: 74 ILSTTPQPQTPTTN 87
+P P TPT +
Sbjct: 193 PPQASPPPPTPTVS 152
Score = 36.2 bits (82), Expect = 0.017
Identities = 32/104 (30%), Positives = 39/104 (36%), Gaps = 24/104 (23%)
Frame = -3
Query: 18 PTMNPPPAQLPPPSQLPPPLSPP-----------------------PQQHPPPLLPPPPP 54
P P P Q+PPPS P P SPP PQ PPP P P
Sbjct: 328 PPPPPAPPQIPPPSSPPSPSSPPSPPASAP*TPSSP*SSNSASSPPPQASPPP--PTPTV 155
Query: 55 LNLNTTLSSLTNLLTFSTQILST-TPQPQTPTTNLIPCLFNPNH 97
+T +S ++ S Q +T T QT T P N +H
Sbjct: 154 SR*TSTATSSSSQTNSSDQTRATATRLSQTRCTTDAPPPQNHHH 23
>TC14984 similar to GB|AAM62447.1|21553354|AY085214 glycine-rich RNA binding
protein 7 {Arabidopsis thaliana;} , partial (19%)
Length = 483
Score = 44.7 bits (104), Expect = 5e-05
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLP---PPPPLNLNTTLSSLTNLLTFSTQI 74
PT P L PP P P +PPP PPPL P P P L ++ SS T ST+
Sbjct: 95 PTTAPASLSLSPP---PQPSNPPP---PPPLPPPEMPSSPATLKSSPSSATATAAPSTKS 256
Query: 75 LSTTPQPQTPTTNLIPCLFNPNHLIPPP 102
++ P P T + P P +P P
Sbjct: 257 TTSPPPPSTL*KSSTPAPTPPRAAVPSP 340
Score = 38.1 bits (87), Expect = 0.005
Identities = 38/109 (34%), Positives = 45/109 (40%), Gaps = 3/109 (2%)
Frame = +3
Query: 15 LH*PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNL-NTTLSSLTNLLTFSTQ 73
L+*P P A P PPP + PP PP L PPPPL+ + +L LL
Sbjct: 9 LY*PPATPTTADGRRP---PPPSTQPP---PPGALRPPPPLHSPSRPHHNLQILLRHHLY 170
Query: 74 ILSTTPQPQTPTTNLIPCLFNPNH-LIPPPSLFLHHLRCPSSPRPL-PH 120
+P+ P H L PP LHHLR S P L PH
Sbjct: 171 HRRRCHRPRRH*KARRPRQRQRRHRLQSPPQAHLHHLRSKSRPHRLRPH 317
Score = 29.3 bits (64), Expect = 2.1
Identities = 20/72 (27%), Positives = 27/72 (36%), Gaps = 3/72 (4%)
Frame = +2
Query: 19 TMNPPPAQL---PPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQIL 75
T PPP+ L P+ PP + P + PP P + TT S T +
Sbjct: 260 TSPPPPSTL*KSSTPAPTPPRAAVPSPKSTSSAAPPTAPTSSGTTAPSKNPPATSQSSWN 439
Query: 76 STTPQPQTPTTN 87
+ P P P N
Sbjct: 440 TWNPAP*NPPFN 475
>AV769326
Length = 262
Score = 44.7 bits (104), Expect = 5e-05
Identities = 30/85 (35%), Positives = 34/85 (39%)
Frame = +3
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILST 77
P P PA LPPP + P PL PP PP+LPPPPP+ L
Sbjct: 30 PRRPPLPALLPPPRR-PRPLHPPILTLLPPILPPPPPIR---------TLRASPLHRYKN 179
Query: 78 TPQPQTPTTNLIPCLFNPNHLIPPP 102
P Q P + P P PPP
Sbjct: 180 LPALQPPPNHRAPPALRPR---PPP 245
Score = 34.7 bits (78), Expect = 0.050
Identities = 21/57 (36%), Positives = 24/57 (41%), Gaps = 14/57 (24%)
Frame = +3
Query: 13 KALH*PTMNPPPAQLPPPSQLP-------------PPLSPPPQQHPPPLL-PPPPPL 55
+ LH P + P LPPP + P L PPP PP L P PPPL
Sbjct: 78 RPLHPPILTLLPPILPPPPPIRTLRASPLHRYKNLPALQPPPNHRAPPALRPRPPPL 248
Score = 27.7 bits (60), Expect = 6.1
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +3
Query: 28 PPPSQLPPPLSPPPQQHPPPLLPPP--PPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPT 85
P PP P P PPP P P PP+ L+ L +L I + P
Sbjct: 9 PLRGAFPPRRPPLPALLPPPRRPRPLHPPI-----LTLLPPILPPPPPIRTLRASPLHRY 173
Query: 86 TNLIPCLFNPNHLIPP 101
NL PNH PP
Sbjct: 174 KNLPALQPPPNHRAPP 221
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 44.7 bits (104), Expect = 5e-05
Identities = 19/36 (52%), Positives = 20/36 (54%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPP 53
P PPP PPP P P PPP +PPP PPPP
Sbjct: 457 PPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRPPPP 350
Score = 44.7 bits (104), Expect = 5e-05
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -1
Query: 22 PPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPP 53
PPP PPP + PPP PPP +PPP PPPP
Sbjct: 394 PPPPPYPPPPRPPPP*PPPP--YPPPP*PPPP 305
Score = 43.1 bits (100), Expect = 1e-04
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -1
Query: 22 PPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
PPP PP + PPP PPP P P PPPPP
Sbjct: 478 PPPPPPRPPPRPPPPYPPPPP*PPLPPYPPPPP 380
Score = 42.4 bits (98), Expect = 2e-04
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -1
Query: 22 PPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
PP PPP PPP PPP PPP PPP P
Sbjct: 412 PPLPPYPPPPPYPPPPRPPPP*PPPPYPPPP*P 314
Score = 42.0 bits (97), Expect = 3e-04
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
P PPP PPP PP PPP PPP PPP P
Sbjct: 454 PPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRPPPP*P 344
Score = 42.0 bits (97), Expect = 3e-04
Identities = 20/37 (54%), Positives = 20/37 (54%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
P PPP PPP PPP PPP PPP PPP P
Sbjct: 403 PPYPPPPPYPPPPR--PPPP*PPPPYPPPP*PPPPRP 299
Score = 41.6 bits (96), Expect = 4e-04
Identities = 19/37 (51%), Positives = 20/37 (53%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
P PPP P P PPP PPP + PPP PPP P
Sbjct: 439 PPYPPPPP*PPLPPYPPPPPYPPPPRPPPP*PPPPYP 329
Score = 41.2 bits (95), Expect = 5e-04
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPP-PLLPPPPPLNLNTTLSSLTNLLTFSTQILS 76
P PPP + PPP PPP PPP PP P P PPP + T L + + + S
Sbjct: 388 PPPYPPPPRPPPP*P-PPPYPPPP*PPPPRPPPPAPPPRRVPCTAWPLGPVTSIALARPS 212
Query: 77 TTPQPQTPTTNLIPCLFNPNHLI--------PPPSLFLHHLRCPSSPRPLPHIDHLLTSL 128
+ T++ P P+ LI PPS + +P+P ++H
Sbjct: 211 GSEATMNSTSSPSPRHRKPSDLISDW*TKRSSPPSSGV------MNPKPFWSLNH----F 62
Query: 129 SYPKTLQN 136
++P TL++
Sbjct: 61 TFPFTLES 38
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPP 53
P PPP PP PPP PP PPP PPPP
Sbjct: 442 PPPYPPPPP*PPLPPYPPPPPYPPPPRPPPP*PPPP 335
Score = 40.0 bits (92), Expect = 0.001
Identities = 19/37 (51%), Positives = 20/37 (53%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
P PPP PPP PPP PP +PPP PPPP
Sbjct: 469 PPPRPPPR--PPPPYPPPPP*PPLPPYPPPPPYPPPP 365
Score = 39.3 bits (90), Expect = 0.002
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 23 PPAQLPPPSQLPPPLSP-PPQQHPPPLLPPPPP 54
PP + PPP PPP P PP PPP PPP P
Sbjct: 457 PPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRP 359
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPP-PLLPPPPP 54
P PPP PP PPP PPP+ PP P P PPP
Sbjct: 436 PYPPPPP*PPLPPYPPPPPYPPPPRPPPP*PPPPYPPP 323
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/28 (60%), Positives = 18/28 (63%)
Frame = -1
Query: 28 PPPSQLPPPLSPPPQQHPPPLLPPPPPL 55
PPP PPP PPP +PPP PP PPL
Sbjct: 475 PPPPPRPPPRPPPP--YPPP--PP*PPL 404
>TC10237 similar to UP|NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75)
(NGM-75), partial (49%)
Length = 803
Score = 44.3 bits (103), Expect = 6e-05
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPP---PPLNLNTTLSSLTNLLTFSTQI 74
P+ PP + PP + PPP+ PP PPP PPP PP + + +
Sbjct: 118 PSQYQPPPEYEPPQEKPPPVYLPPYWKPPPAYPPPYEKPPPEYEPPQEKPPPVYSPPYER 297
Query: 75 LST-TPQPQTPTTNLIPCLFNPNHLIPPP 102
T P P P +L P +++P + PPP
Sbjct: 298 PPTGHPTPYPPFYHL-PPVYHPPYEKPPP 381
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/112 (29%), Positives = 39/112 (34%), Gaps = 5/112 (4%)
Frame = +1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPP----PPPLNLNTTLSSLTNLLTFSTQ 73
P + PP + PPP PP PP Q PPP P PPP+ L
Sbjct: 52 PPLEKPPHEKPPPEYQPPHKKPPSQYQPPPEYEPPQEKPPPVYLPPYWK----------- 198
Query: 74 ILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSS-PRPLPHIDHL 124
P P P + P PPP + R P+ P P P HL
Sbjct: 199 ----PPPAYPPPYEKPPPEYEPPQEKPPPVYSPPYERPPTGHPTPYPPFYHL 342
Score = 37.0 bits (84), Expect = 0.010
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 6/44 (13%)
Frame = +1
Query: 18 PTMNPPPAQLPP----PSQLPPPLSPPPQQHPPPLLPP--PPPL 55
PT PP LPP P + PPPL PP + PP PP PP+
Sbjct: 313 PTPYPPFYHLPPVYHPPYEKPPPLYQPPHEKPPIYEPPHEKPPI 444
Score = 36.2 bits (82), Expect = 0.017
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 13/54 (24%)
Frame = +1
Query: 16 H*PTMNPPPAQLPPPSQLP----PPLSPPPQQHP---------PPLLPPPPPLN 56
H P + PP + PPP P PP+ PP + P PPL PPP N
Sbjct: 337 HLPPVYHPPYEKPPPLYQPPHEKPPIYEPPHEKPPIYEPPHEKPPLYEPPPGYN 498
Score = 34.7 bits (78), Expect = 0.050
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +1
Query: 18 PTMNPPPAQLPP----PSQLPPPLSPPPQQHPPPLLPPPPPLN 56
P + PP + PP P + PP PPP +PPP PP N
Sbjct: 406 PPIYEPPHEKPPIYEPPHEKPPLYEPPPGYNPPPYGHYPPSKN 534
Score = 30.8 bits (68), Expect = 0.73
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 22 PPPAQLP---PPSQLPPPLSPPPQQHPPPLLPPP 52
PP Q P PP + P PL PP + PPP PP
Sbjct: 7 PPKYQPPHEKPPFEKP-PLEKPPHEKPPPEYQPP 105
>TC14338 similar to UP|Q9MAH5 (Q9MAH5) F12M16.16, partial (33%)
Length = 1751
Score = 43.9 bits (102), Expect = 8e-05
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Frame = +3
Query: 25 AQLPPPSQ---LPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQP 81
A P P LP L+P P Q PPPL P PP L+ T+ S P P
Sbjct: 45 ASFPKPEP*T*LPSSLAPSPLQPPPPLPPSPPSLSSAATVPS--------------PPYP 182
Query: 82 QTP-TTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRPLPHIDHLLTSLSYPKTLQNP--T 138
P T+ P +P PPPS L L P+ PR P TS + + ++P T
Sbjct: 183 SPPAATSSPPPAPSPPAPPPPPSTIL-TLTGPTVPRRKPFCSMAATSSTGSLSWRSPKVT 359
Query: 139 SIHLSSYLDFT 149
+ + S +D +
Sbjct: 360 QLGMISSMDIS 392
Score = 33.5 bits (75), Expect = 0.11
Identities = 21/54 (38%), Positives = 22/54 (39%), Gaps = 12/54 (22%)
Frame = +3
Query: 18 PTMNPPPAQLPPPS-------QLPPPLSPP-----PQQHPPPLLPPPPPLNLNT 59
P PPP PPS PP SPP P P P PPPPP + T
Sbjct: 102 PLQPPPPLPPSPPSLSSAATVPSPPYPSPPAATSSPPPAPSPPAPPPPPSTILT 263
Score = 27.7 bits (60), Expect = 6.1
Identities = 14/37 (37%), Positives = 15/37 (39%)
Frame = +3
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP 54
P +PP A PP PP PPP L P P
Sbjct: 174 PYPSPPAATSSPPPAPSPPAPPPPPSTILTLTGPTVP 284
>BP038942
Length = 617
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/95 (34%), Positives = 45/95 (46%), Gaps = 12/95 (12%)
Frame = +1
Query: 19 TMNPPPAQLPPPSQ--------LPPPLSPPPQQHPP----PLLPPPPPLNLNTTLSSLTN 66
++ PPP L PPS LP PL+ P PP P L PP P + LS L++
Sbjct: 304 SLTPPPPPLSPPSLSPSNPVSVLPVPLATPLSPSPPTSLFPFLQPPTP----SRLSRLSS 471
Query: 67 LLTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPP 101
+ + + S + +P +PT L P LF L PP
Sbjct: 472 FTSNPSSVTSLSTKPSSPT--LTPTLF----LSPP 558
Score = 33.1 bits (74), Expect = 0.15
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 8/105 (7%)
Frame = +3
Query: 11 KNKALH*PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPP---LNLNTTLSSLTNL 67
K +L+ T + PP++ PPP PP L+PP P P L + T SSL
Sbjct: 171 KYPSLYSTTPSSPPSKQPPP---PPTLNPPSCSFSLSTNFPTGPSFKLAYSPTASSLPPF 341
Query: 68 LTFSTQILSTTPQPQ----TPTTNLIPCLF-NPNHLIPPPSLFLH 107
L T+ P+ T + NL L N P PS FLH
Sbjct: 342 SLSLKSGLGTSGSPRHSPLTFSANLSLSLSPTTNTFTPVPSFFLH 476
Score = 30.8 bits (68), Expect = 0.73
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +3
Query: 36 PLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNP 95
P SPP +Q PPP PP + + S TN T + L+ +P +
Sbjct: 198 PSSPPSKQPPPPPTLNPP----SCSFSLSTNFPTGPSFKLAYSPTASS------------ 329
Query: 96 NHLIPPPSLFLHH-LRCPSSPRPLPHIDHLLTSLSYPKTLQNPTSIHLSSYLDFTNFFYN 154
+PP SL L L SPR P SLS T T + S +L F F +
Sbjct: 330 ---LPPFSLSLKSGLGTSGSPRHSPLTFSANLSLSLSPTTNTFTPVP-SFFLHFKPQFGH 497
Query: 155 NCPGVVTFSDANSVAQTATFHLPDFLSRECSTVCSPTPNHKPS 197
FSD N T LP +P P+H+ S
Sbjct: 498 FSLNKTVFSDPN----TDPVSLP----------TAPQPDHRES 584
Score = 28.9 bits (63), Expect = 2.8
Identities = 24/97 (24%), Positives = 42/97 (42%), Gaps = 7/97 (7%)
Frame = +2
Query: 42 QQHPPPLLPPPPPLN------LNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNP 95
QQH ++ P+ ++ ++ T + S+++ T Q P +++ P
Sbjct: 140 QQHSTQIMTAKVPITVLNNPFISAVKATTTTANSESSELFLLTLH-QLPNRSILQARLLP 316
Query: 96 NHLIPPPSLFLHHLRCPSSPRPLPHIDHLLTS-LSYP 131
+ L+ PP L L +R P P HLL LS+P
Sbjct: 317 HRLLSPPLLSLPQIRSRYFRFPSPLPSHLLRQPLSFP 427
>TC10682 similar to PIR|A86408|A86408 FH protein interacting protein FIP1
[imported] - Arabidopsis thaliana
{Arabidopsis thaliana;}, partial (36%)
Length = 577
Score = 43.5 bits (101), Expect = 1e-04
Identities = 35/110 (31%), Positives = 47/110 (41%), Gaps = 18/110 (16%)
Frame = +3
Query: 26 QLPPPSQLPPPLSPP----------------PQQHPPPL--LPPPPPLNLNTTLSSLTNL 67
++PP P SPP P PPPL LPPPPP + L+ L+ L
Sbjct: 81 EVPPTFHFSPQSSPPLHRRRRSPI*AAINHTPNPPPPPLPPLPPPPPNPMTLILTPLSTL 260
Query: 68 LTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRP 117
LT ++ TPTT+ F+ +HL P +L LH + P P
Sbjct: 261 LTPNS----------TPTTS-----FHHHHL-NPSTLLLHSMHAAMPPPP 362
>AV410227
Length = 428
Score = 43.1 bits (100), Expect = 1e-04
Identities = 20/42 (47%), Positives = 24/42 (56%), Gaps = 5/42 (11%)
Frame = +1
Query: 18 PTMNPPPAQLPPPSQLPPP--LSPPPQQHPPPL---LPPPPP 54
PT PPP+ P P+ PPP ++PP PPP PPPPP
Sbjct: 220 PTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SPPPPP 345
Score = 37.0 bits (84), Expect = 0.010
Identities = 28/87 (32%), Positives = 39/87 (44%)
Frame = +1
Query: 31 SQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIP 90
SQ P P PP PP PPP +++ +S T+ L+ S + TP P +P
Sbjct: 97 SQFPGPH*PPSSNASPPR---PPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPP----- 252
Query: 91 CLFNPNHLIPPPSLFLHHLRCPSSPRP 117
+P PPPS+ PS+P P
Sbjct: 253 ---SPASSPPPPSM---TPPAPSTPPP 315
Score = 32.7 bits (73), Expect = 0.19
Identities = 17/42 (40%), Positives = 19/42 (44%), Gaps = 3/42 (7%)
Frame = +1
Query: 18 PTMNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPP---PPPLN 56
P+M PP PPPS P PP PP + P PP N
Sbjct: 277 PSMTPPAPSTPPPSSA*SPPPPPS*AGSPPAVEPLSAPPCAN 402
Score = 30.4 bits (67), Expect = 0.95
Identities = 18/41 (43%), Positives = 19/41 (45%), Gaps = 10/41 (24%)
Frame = +1
Query: 22 PPPAQLPPPSQLPPPLS----PPPQQ---HPP---PLLPPP 52
PPP+ PP PPP S PPP PP PL PP
Sbjct: 271 PPPSMTPPAPSTPPPSSA*SPPPPPS*AGSPPAVEPLSAPP 393
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/52 (30%), Positives = 19/52 (35%), Gaps = 15/52 (28%)
Frame = +1
Query: 18 PTMNPPPAQLPPP---------------SQLPPPLSPPPQQHPPPLLPPPPP 54
P+ N P + PP S P +PPP P P PPPP
Sbjct: 124 PSSNASPPRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPP 279
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,605,853
Number of Sequences: 28460
Number of extensions: 382643
Number of successful extensions: 16906
Number of sequences better than 10.0: 1034
Number of HSP's better than 10.0 without gapping: 5659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10679
length of query: 661
length of database: 4,897,600
effective HSP length: 96
effective length of query: 565
effective length of database: 2,165,440
effective search space: 1223473600
effective search space used: 1223473600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146559.13