TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144723.3 + phase: 0 
         (127 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC10669 similar to UP|Q9ZWN0 (Q9ZWN0) GPI-anchored protein, part...   224  3e-60
AV768204                                                               34  0.007
TC11912                                                                27  0.81
BP072908                                                               27  1.4
BP067869                                                               26  2.4
AV771262                                                               25  3.1
TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodula...    25  3.1
AV769914                                                               25  3.1
TC18529                                                                25  5.2
TC18065                                                                25  5.2
BP054955                                                               24  6.8
BP061424                                                               24  8.9
BP043969                                                               24  8.9
TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial...    24  8.9

>TC10669 similar to UP|Q9ZWN0 (Q9ZWN0) GPI-anchored protein, partial (87%)
          Length = 1031

 Score =  224 bits (571), Expect = 3e-60
 Identities = 104/121 (85%), Positives = 111/121 (90%)
 Frame = +1

Query: 7   APAGCSVNFEFLNYTIITSKCKGPKYPPKECCGSFKEFACPYADVINDLTNDCASTMFSY 66
           A  GCSVNFEFLNYTIITSKCKGP YPPK+CCG+FKEFACPY DV+NDLTNDCASTMFSY
Sbjct: 418 AKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLNDLTNDCASTMFSY 597

Query: 67  INLYGRYPPGLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFLILL 126
           INLYG+YPPGLFA ECREGKEGLAC ALPPS  ADDT++Q+VH PSLVLVLTAC FLILL
Sbjct: 598 INLYGKYPPGLFAHECREGKEGLACPALPPSALADDTSSQVVHFPSLVLVLTAC-FLILL 774

Query: 127 F 127
           F
Sbjct: 775 F 777


>AV768204 
          Length = 268

 Score = 34.3 bits (77), Expect = 0.007
 Identities = 16/30 (53%), Positives = 21/30 (69%)
 Frame = -3

Query: 94  LPPSVSADDTANQIVHTPSLVLVLTACIFL 123
           LPPS  AD+T++Q+ H PSL L LTA   +
Sbjct: 266 LPPSALADNTSSQVGHFPSLELGLTASFLI 177


>TC11912 
          Length = 505

 Score = 27.3 bits (59), Expect = 0.81
 Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 1/37 (2%)
 Frame = +2

Query: 90  ACDALPPSVSADDTANQIVHTP-SLVLVLTACIFLIL 125
           A  +LPPS     ++ + VHT  S VLVLT  + LIL
Sbjct: 122 AISSLPPSSLPSSSSQEKVHTSISHVLVLTFLLLLIL 232


>BP072908 
          Length = 405

 Score = 26.6 bits (57), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 84  EGKEGLACDALPPSVSADDT 103
           +G EGL C A PP  S  D+
Sbjct: 348 QGSEGLTCSAAPPDQSTGDS 289


>BP067869 
          Length = 495

 Score = 25.8 bits (55), Expect = 2.4
 Identities = 11/17 (64%), Positives = 12/17 (69%)
 Frame = -3

Query: 27  CKGPKYPPKECCGSFKE 43
           C G + PPK CCGS KE
Sbjct: 346 CAG-QLPPKSCCGS*KE 299


>AV771262 
          Length = 360

 Score = 25.4 bits (54), Expect = 3.1
 Identities = 11/23 (47%), Positives = 12/23 (51%)
 Frame = +1

Query: 66  YINLYGRYPPGLFASECREGKEG 88
           Y+NLY RYP      EC  G  G
Sbjct: 202 YVNLYRRYPST*VTVECTLGLHG 270


>TC16203 UP|Q8GRU6 (Q8GRU6) LRR receptor-like kinase (Hypernodulation aberrant
            root formation protein), complete
          Length = 3308

 Score = 25.4 bits (54), Expect = 3.1
 Identities = 14/43 (32%), Positives = 23/43 (52%)
 Frame = -3

Query: 1    MTLFHIAPAGCSVNFEFLNYTIITSKCKGPKYPPKECCGSFKE 43
            M +F++     S     + + ++TSK K   +PP+  CGS KE
Sbjct: 1290 MNVFNLPLLHRSGGINPVRWFLVTSKYKNLPFPPR-LCGSTKE 1165


>AV769914 
          Length = 287

 Score = 25.4 bits (54), Expect = 3.1
 Identities = 15/37 (40%), Positives = 20/37 (53%), Gaps = 1/37 (2%)
 Frame = +2

Query: 85  GKEGLA-CDALPPSVSADDTANQIVHTPSLVLVLTAC 120
           GK G   C+ LP +V+A D A+ + H P L    T C
Sbjct: 107 GKTGAEDCNCLPFAVAAADAADLVGHPPILHNRHTCC 217


>TC18529 
          Length = 470

 Score = 24.6 bits (52), Expect = 5.2
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
 Frame = +2

Query: 17 FLNYTIITSKCK------GPKYPPKECCGSFKEFAC 46
          F++Y  + SK        GPK      CGSF  + C
Sbjct: 20 FISYNQLKSKTSSNVVLIGPKKAGSNKCGSFSSYTC 127


>TC18065 
          Length = 522

 Score = 24.6 bits (52), Expect = 5.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 36  ECCGSFKEFACPYADVINDLTNDCASTMFSYINLY 70
           ECCG    F+C +   +ND   +C     +++ LY
Sbjct: 180 ECCGLSMNFSCYWPIAMND--ENCGVYCKNFLYLY 278


>BP054955 
          Length = 525

 Score = 24.3 bits (51), Expect = 6.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 34  PKECCGSFKEFACPYADVINDLTNDCASTMFSY 66
           P E C SF      YADV+  LT +  +++  +
Sbjct: 239 PSESCNSFGRTNLSYADVLIRLTPNAFNSILCF 337


>BP061424 
          Length = 362

 Score = 23.9 bits (50), Expect = 8.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
 Frame = -2

Query: 26  KCKGPKYPPKECCGSFKEFAC-------PYADVINDLTNDCA---STMFSYINLY 70
           +C  P +    CCG F   AC       P+ D + ++T  C+   STM    N++
Sbjct: 190 RC*EPMF*S*SCCGDFFCLACSLRLASKPF*DSLQEITFFCSFMYSTMAYDANVF 26


>BP043969 
          Length = 445

 Score = 23.9 bits (50), Expect = 8.9
 Identities = 9/16 (56%), Positives = 12/16 (74%)
 Frame = -3

Query: 78  FASECREGKEGLACDA 93
           FAS C + ++G ACDA
Sbjct: 338 FASICTDTRKGCACDA 291


>TC7931 weakly similar to UP|Q43640 (Q43640) Dioxygenase, partial (29%)
          Length = 1477

 Score = 23.9 bits (50), Expect = 8.9
 Identities = 11/36 (30%), Positives = 18/36 (49%)
 Frame = +1

Query: 31   KYPPKECCGSFKEFACPYADVINDLTNDCASTMFSY 66
            +YP    C S + F+C +  ++    + C S  FSY
Sbjct: 1273 RYP----CSSLRSFSCLFCFLLYLCLSFCLSLQFSY 1368


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.325    0.141    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,901,586
Number of Sequences: 28460
Number of extensions: 43887
Number of successful extensions: 262
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of query: 127
length of database: 4,897,600
effective HSP length: 80
effective length of query: 47
effective length of database: 2,620,800
effective search space: 123177600
effective search space used: 123177600
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)