BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144617.11 + phase: 0
(688 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP042603 298 1e-81
AV767790 179 2e-45
AV408212 178 3e-45
TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial... 118 4e-27
BP084436 111 3e-25
TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG... 92 3e-19
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 78 4e-15
AV410689 72 2e-13
AW720417 66 2e-11
AV418552 60 9e-10
AV422734 59 2e-09
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc... 59 2e-09
BP038344 56 2e-08
AV779571 55 5e-08
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ... 54 8e-08
TC14737 similar to UP|Q9LEB3 (Q9LEB3) RNA binding protein 47, pa... 52 2e-07
AW719943 50 1e-06
TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snR... 49 2e-06
AV415922 48 5e-06
TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-bi... 48 5e-06
>BP042603
Length = 565
Score = 298 bits (764), Expect = 1e-81
Identities = 157/193 (81%), Positives = 166/193 (85%), Gaps = 3/193 (1%)
Frame = +3
Query: 395 LQAGGPPFPRGDPDMLMKLKLAQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQ 454
LQAGGPPFPRGD DMLMKLKLAQ QQQNAN QQQQLQQ H+LSN QSQ++N NMHQQ
Sbjct: 3 LQAGGPPFPRGDTDMLMKLKLAQFHQHQQQNANSQQQQLQQ-HALSNPQSQTSNLNMHQQ 179
Query: 455 DNKVGGGGGSVTGDGSMSNSFRGNDQVSKSQPGRKRKQPVSSSGPANSSGTANTAGPSPS 514
D GG +V DGSMSN+FRGNDQV+K+Q GRKRKQPVSSSGPANSSGTANTAGPSPS
Sbjct: 180 DKVAGG---NVNVDGSMSNTFRGNDQVTKNQTGRKRKQPVSSSGPANSSGTANTAGPSPS 350
Query: 515 SAPSTPSGSTHTPGDVISMPSLPHNGSSSKPLMMFSTDGN---TSPSNQLADVDRFVADG 571
SAPSTP STHT GDV+SMP+LPHNGSSSKPLMMF TDG TSPSNQLADVDRFV DG
Sbjct: 351 SAPSTP--STHTAGDVMSMPALPHNGSSSKPLMMFGTDGTGTLTSPSNQLADVDRFVEDG 524
Query: 572 SLDDNVESFLSHD 584
SLDDNVESFLSHD
Sbjct: 525 SLDDNVESFLSHD 563
Score = 34.3 bits (77), Expect = 0.068
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 115 MQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQQG 164
M M+ L Q QQQ QQQQ QQ PQ Q QQ + G
Sbjct: 45 MLMKLKLAQFHQHQQQNANSQQQQLQQHALSNPQSQTSNLNMHQQDKVAG 194
Score = 30.8 bits (68), Expect = 0.75
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +3
Query: 117 MQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQQGRDRAHLLNGGGA 176
M L Q Q QQQ QQQQ QQ Q Q QQ + ++G +
Sbjct: 45 MLMKLKLAQFHQHQQQNANSQQQQLQQHALSNPQSQTSNLNMHQQDKVAGGNVNVDGSMS 224
Query: 177 NGLVGN 182
N GN
Sbjct: 225 NTFRGN 242
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/104 (25%), Positives = 38/104 (35%)
Frame = +3
Query: 83 LIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQ 142
L+K + Q Q QQ Q+ + QQQQ QQH + Q Q QQ +
Sbjct: 48 LMKLKLAQFHQHQQ----QNANSQQQQLQQHALSNP----QSQTSNLNMHQQDKVAGGNV 203
Query: 143 QQQQPQHQQQQQQQQQQQQQQGRDRAHLLNGGGANGLVGNPSTA 186
+ Q + Q GR R ++ G G +TA
Sbjct: 204 NVDGSMSNTFRGNDQVTKNQTGRKRKQPVSSSGPANSSGTANTA 335
>AV767790
Length = 617
Score = 179 bits (453), Expect = 2e-45
Identities = 105/186 (56%), Positives = 129/186 (68%), Gaps = 13/186 (6%)
Frame = +3
Query: 488 RKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSGSTHTPGDVISMPSLPHNGSS-SKPL 546
RKRK P +SSG ANS+GT NT GPS +S PSTPS THTPGD ++M N + SK L
Sbjct: 72 RKRKGP-TSSGAANSTGTGNTHGPS-NSQPSTPS--THTPGDGVAMAGNLQNVTGVSKGL 239
Query: 547 MMFSTDGN---TSPSNQLADVDRFVADGSLDDNVESFLSHDDTDPRDPVGRM-------- 595
MM+ T+G TS +NQL D++ F GSLDDNVESFLS DD D RD G +
Sbjct: 240 MMYGTEGTGGLTSSTNQLDDMEHFGDVGSLDDNVESFLSQDDGDGRDLFGTLKRNPSEHA 419
Query: 596 -DVSKGFTFSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEH 654
D SK F+FSE+ S+R S +KVVC HFSSDGKLLAS GHD+KVVLW ++L+ ++T + H
Sbjct: 420 TDASKAFSFSEVGSIRKSNSKVVCCHFSSDGKLLASAGHDQKVVLWNMETLQTESTPDAH 599
Query: 655 SLLITD 660
SL+ITD
Sbjct: 600 SLIITD 617
>AV408212
Length = 362
Score = 178 bits (451), Expect = 3e-45
Identities = 99/129 (76%), Positives = 105/129 (80%), Gaps = 3/129 (2%)
Frame = +3
Query: 98 QPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQ 157
QPQQSPHQQQQQQQ MQMQQ+LLQR QQQQQQQQQQQQQQQQQQ QQQQ
Sbjct: 3 QPQQSPHQQQQQQQH--MQMQQILLQRHAALQQQQQQQQQQQQQQQQQQ------SQQQQ 158
Query: 158 QQQQQQGRDRAHLLNGGGANGLVGNPSTANAIATKMYEERLKLPLQRDSLEDAAMKQRFG 217
Q QQQ RDRAHLLNG ANGLVGN TANA+ATKMYEERLKLPLQRDSL++AAMKQRFG
Sbjct: 159 PQSQQQSRDRAHLLNGS-ANGLVGNSGTANALATKMYEERLKLPLQRDSLDEAAMKQRFG 335
Query: 218 D---QLLDP 223
+ QL+DP
Sbjct: 336 ENMGQLIDP 362
Score = 39.7 bits (91), Expect = 0.002
Identities = 21/48 (43%), Positives = 26/48 (53%)
Frame = +3
Query: 417 QLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGS 464
Q Q QQQQ QQQQ QQQ S QQS+ H ++ N + G G+
Sbjct: 96 QQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNGSANGLVGNSGT 239
Score = 35.8 bits (81), Expect = 0.023
Identities = 20/59 (33%), Positives = 28/59 (46%)
Frame = +3
Query: 416 AQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGSVTGDGSMSNS 474
A LQ QQQQ QQQQ QQQ S QQ + + + + G + G+ +N+
Sbjct: 81 AALQQQQQQ---QQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNGSANGLVGNSGTANA 248
Score = 31.6 bits (70), Expect = 0.44
Identities = 25/89 (28%), Positives = 33/89 (36%)
Frame = +3
Query: 419 QHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGSVTGDGSMSNSFRGN 478
Q QQQQ QQ L Q+H+ QQ Q QQ + S +
Sbjct: 24 QQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQ---------------QSQQQQ 158
Query: 479 DQVSKSQPGRKRKQPVSSSGPANSSGTAN 507
Q + R S++G +SGTAN
Sbjct: 159 PQSQQQSRDRAHLLNGSANGLVGNSGTAN 245
Score = 27.7 bits (60), Expect = 6.3
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +3
Query: 318 LQQQKPFIQSPQPFHQLPMLTQQHQQQLMLAQQNLASPSASDDSRRLRMLLNPRNMG-VS 376
+Q Q+ +Q Q QQ QQQ Q P + SR LLN G V
Sbjct: 48 MQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNGSANGLVG 227
Query: 377 KDGLSN 382
G +N
Sbjct: 228 NSGTAN 245
>TC13152 similar to UP|Q84XX6 (Q84XX6) Leunig (Fragment), partial (60%)
Length = 453
Score = 118 bits (295), Expect = 4e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 627 LLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVDN 686
LLASGGHDKK VLWYTDSLKQKATLEEHS LITDVRFSPSMPRLATSS+DKTV+VWDVDN
Sbjct: 2 LLASGGHDKKAVLWYTDSLKQKATLEEHSALITDVRFSPSMPRLATSSFDKTVKVWDVDN 181
>BP084436
Length = 345
Score = 111 bits (278), Expect = 3e-25
Identities = 56/63 (88%), Positives = 59/63 (92%)
Frame = +2
Query: 241 QVLHGAAGAMSPQVQARSQQLPGSTLDIKTEINPVLNPRAAGPEGSLMAVPGSNQGGNNL 300
QVLH AG MSPQVQARSQQLPGSTLDIK+EINPVLNPRAAGPEGSL+A+PGSNQG NNL
Sbjct: 161 QVLH--AGGMSPQVQARSQQLPGSTLDIKSEINPVLNPRAAGPEGSLLAIPGSNQGSNNL 334
Query: 301 TLK 303
TLK
Sbjct: 335 TLK 343
Score = 28.1 bits (61), Expect = 4.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 1 MSQTNWEADKM 11
MSQTNWEADKM
Sbjct: 128 MSQTNWEADKM 160
>TC16076 weakly similar to GB|AAG32022.1|11141605|AF277458 LEUNIG
{Arabidopsis thaliana;} , partial (24%)
Length = 1048
Score = 92.0 bits (227), Expect = 3e-19
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +3
Query: 616 VVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSY 675
V C HFSSDGK+LAS G DKKVVLW D+L+ ++T E+H +I+DVRF P+ +LAT+S
Sbjct: 3 VTCCHFSSDGKMLASAGDDKKVVLWNMDTLQTESTPEQHKSVISDVRFRPNSSQLATASI 182
Query: 676 DKTVRVWDVDN 686
DK+VR+WD N
Sbjct: 183 DKSVRLWDAAN 215
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 78.2 bits (191), Expect = 4e-15
Identities = 47/75 (62%), Positives = 49/75 (64%)
Frame = +2
Query: 89 QQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQ 148
QQQQQ QQ PQ + QQQQQQQ Q+Q QQ L Q Q QQ Q QQQQ Q Q QQQ PQ
Sbjct: 20 QQQQQLQQQPPQLTQLQQQQQQQLPQVQ-QQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQ 196
Query: 149 HQQQQQQQQQQQQQQ 163
QQ Q QQ QQQQQ
Sbjct: 197 LQQLQHQQLPQQQQQ 241
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/102 (46%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Frame = +2
Query: 82 QLIKAREQQQQQQQQPQPQQSPHQQQQQ----QQQHQMQMQQMLLQRQHQQQQQQQQQQQ 137
QL + ++QQQ QQQ PQ Q QQQQQ QQQ QMQQ L + QQQ Q Q QQ
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQ 184
Query: 138 Q----QQQQQQQQPQHQQQQ-QQQQQQQQQQGRDRAHLLNGG 174
Q QQ Q QQ PQ QQQ Q QG R+ +++ G
Sbjct: 185 QLPQLQQLQHQQLPQQQQQMVGAGMGQAYVQGPGRSQMVSQG 310
Score = 55.1 bits (131), Expect = 4e-08
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 82 QLIKAREQQQQQQQQPQPQQSPHQQQQQ------QQQHQMQMQQMLLQRQHQQQQQQQQQ 135
QL + ++QQQQQ Q Q QQ QQQQ QQ Q+Q QQ L Q Q Q QQ QQ
Sbjct: 53 QLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQLQQLQHQQLPQQ 232
Query: 136 QQQQQQQQQQQPQHQQQQQQQQQQQQQQGRDRAHLLNGG 174
QQQ Q Q + Q Q Q + ++ GG
Sbjct: 233 QQQMVGAGMGQAYVQGPGRSQMVSQGQVSQGPTNIGGGG 349
Score = 54.7 bits (130), Expect = 5e-08
Identities = 44/98 (44%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Frame = +2
Query: 89 QQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQ-------QQQQQQQQQQQQ 141
QQQQQQQ PQ QQ Q QQQQ Q+Q QQ L Q Q QQQ Q QQ QQQQQ
Sbjct: 68 QQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQ-LSQLQPQQQLPQLQQLQHQQLPQQQQQM 244
Query: 142 ----QQQQQPQHQQQQQQQQQQQQQQGRDRAHLLNGGG 175
Q Q + Q Q Q QG + GGG
Sbjct: 245 VGAGMGQAYVQGPGRSQMVSQGQVSQGPTN---IGGGG 349
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/70 (38%), Positives = 33/70 (46%)
Frame = +2
Query: 77 SYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQ 136
S ++ Q + +QQQ Q QPQ QQ P QQ Q QQ Q QQM+ Q Q +
Sbjct: 116 SQMQQQQLPQLQQQQLSQLQPQ-QQLPQLQQLQHQQLPQQQQQMVGAGMGQAYVQGPGRS 292
Query: 137 QQQQQQQQQQ 146
Q Q Q Q
Sbjct: 293 QMVSQGQVSQ 322
Score = 37.0 bits (84), Expect = 0.010
Identities = 34/95 (35%), Positives = 39/95 (40%), Gaps = 15/95 (15%)
Frame = +2
Query: 81 TQLIKAREQQ-----QQQQQQPQPQQSPHQQQQQ----------QQQHQMQMQQMLLQRQ 125
TQL + ++QQ QQQ Q Q QQ P QQQQ Q Q+Q QQ+
Sbjct: 59 TQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQLQQLQHQQL----- 223
Query: 126 HQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQ 160
QQQQQ Q Q P Q Q Q Q
Sbjct: 224 --PQQQQQMVGAGMGQAYVQGPGRSQMVSQGQVSQ 322
Score = 32.3 bits (72), Expect = 0.26
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = +2
Query: 410 LMKLKLAQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGSVTGDG 469
+ + +L QLQ QQ P QQQL Q L +QQ QQ VG G G G
Sbjct: 122 MQQQQLPQLQQQQLSQLQP-QQQLPQLQQLQHQQLP------QQQQQMVGAGMGQAYVQG 280
Query: 470 SMSNSFRGNDQVSK 483
+ QVS+
Sbjct: 281 PGRSQMVSQGQVSQ 322
Score = 28.9 bits (63), Expect = 2.8
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 1/42 (2%)
Frame = +2
Query: 414 KLAQLQHQQQ-QNANPQQQQLQQQHSLSNQQSQSANHNMHQQ 454
+L QLQ QQQ Q PQ QLQQQ Q Q + QQ
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQ 130
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/43 (41%), Positives = 21/43 (47%), Gaps = 5/43 (11%)
Frame = +2
Query: 315 SGLLQQQKPFIQSPQ-----PFHQLPMLTQQHQQQLMLAQQNL 352
S + QQQ P +Q Q P QLP L Q QQL QQ +
Sbjct: 116 SQMQQQQLPQLQQQQLSQLQPQQQLPQLQQLQHQQLPQQQQQM 244
>AV410689
Length = 429
Score = 72.4 bits (176), Expect = 2e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +2
Query: 1 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAID 46
M+Q+NWEADKMLDVYI+DYLVK+ L +A++F EGKVS DPVAID
Sbjct: 290 MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAID 427
>AW720417
Length = 554
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/110 (42%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +3
Query: 97 PQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQ 156
P Q PHQQQQQQ Q+ +QR QQQ QQQ QQ Q Q QHQ QQQQ
Sbjct: 9 PGFQPRPHQQQQQQHQY--------VQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQ 164
Query: 157 QQQQQQQGRDRAHLLNGGGANGLVGN-----PSTANAIATKMYEERLKLP 201
QQQQQQ R R L GG +V S + +++ ++ RLK+P
Sbjct: 165 QQQQQQWLR-RTQL--GGNDTNVVEEVEKTVQSESADPSSQDWKARLKIP 305
Score = 62.4 bits (150), Expect = 2e-10
Identities = 31/59 (52%), Positives = 36/59 (60%)
Frame = +3
Query: 85 KAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQ 143
+ +QQQQQ Q Q P+QQQ QQQHQ Q Q QH QQQQQQQQQQ ++ Q
Sbjct: 24 RPHQQQQQQHQYVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWLRRTQ 200
Score = 60.1 bits (144), Expect = 1e-09
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 96 QPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQ--QQQQQQQQQQQQQQPQHQQQQ 153
QP+P Q QQ Q Q+H M QQ Q+QHQQ Q Q QQ Q QQQQQQQQ Q ++
Sbjct: 18 QPRPHQQQQQQHQYVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWLRRT 197
Query: 154 Q 154
Q
Sbjct: 198 Q 200
Score = 38.1 bits (87), Expect = 0.005
Identities = 18/48 (37%), Positives = 25/48 (51%)
Frame = +3
Query: 78 YIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQ 125
Y++ ++ ++Q QQQ Q Q Q Q QQQ Q Q QQ L + Q
Sbjct: 57 YVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWLRRTQ 200
Score = 30.8 bits (68), Expect = 0.75
Identities = 21/77 (27%), Positives = 29/77 (37%)
Frame = +3
Query: 417 QLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGGSVTGDGSMSNSFR 476
Q HQQQ N Q Q QH NQQ Q + ++GG +V + +
Sbjct: 87 QQYHQQQHQQNQPQYHQQHQH---NQQQQQQQQQQWLRRTQLGGNDTNVVEEVEKTVQSE 257
Query: 477 GNDQVSKSQPGRKRKQP 493
D S+ R + P
Sbjct: 258 SADPSSQDWKARLKIPP 308
Score = 30.0 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (51%), Gaps = 3/42 (7%)
Frame = +3
Query: 419 QHQQQQNANPQQQQL---QQQHSLSNQQSQSANHNMHQQDNK 457
Q QQQQ+ Q+ + QQ H +QQ+Q H HQ + +
Sbjct: 33 QQQQQQHQYVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQ 158
>AV418552
Length = 386
Score = 60.5 bits (145), Expect = 9e-10
Identities = 43/94 (45%), Positives = 47/94 (49%), Gaps = 10/94 (10%)
Frame = +2
Query: 80 ETQLIKAREQQQQQQQQPQPQQSPH----QQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQ 135
+ Q + + QQ QPQ Q PH QQ QQQQ Q+Q Q LQ QQQQ Q
Sbjct: 53 QEQQLMQQHQQMLSYFQPQQQLLPHLQLQQQLQQQQLAQLQQQLSQLQLTLLQQQQLTQL 232
Query: 136 QQQQQQQQQQQ------PQHQQQQQQQQQQQQQQ 163
QQQQ Q QQQ QHQ Q QQQ QQQ
Sbjct: 233 QQQQLAQLQQQLAQLQLTQHQHTQLQQQLLPQQQ 334
Score = 56.6 bits (135), Expect = 1e-08
Identities = 40/81 (49%), Positives = 43/81 (52%), Gaps = 4/81 (4%)
Frame = +2
Query: 88 EQQQQQQQQPQPQQSPHQQQ----QQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQ 143
+QQ QQQQ Q QQ Q Q QQQQ Q+Q QQ L Q Q Q Q Q Q Q Q QQ
Sbjct: 137 QQQLQQQQLAQLQQQLSQLQLTLLQQQQLTQLQQQQ-LAQLQQQLAQLQLTQHQHTQLQQ 313
Query: 144 QQQPQHQQQQQQQQQQQQQQG 164
Q PQ Q QQ Q QQ +G
Sbjct: 314 QLLPQQQFQQLPQHQQMVGEG 376
Score = 55.8 bits (133), Expect = 2e-08
Identities = 39/93 (41%), Positives = 47/93 (49%)
Frame = +2
Query: 69 EKHSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQ 128
++H ++ + + Q + Q QQQ QQ Q Q QQQ Q Q + QQ L Q Q QQ
Sbjct: 71 QQHQQMLSYFQPQQQLLPHLQLQQQLQQQQLAQL--QQQLSQLQLTLLQQQQLTQLQQQQ 244
Query: 129 QQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQ 161
Q QQQ Q Q Q Q Q QQQ QQQ QQ
Sbjct: 245 LAQLQQQLAQLQLTQHQHTQLQQQLLPQQQFQQ 343
Score = 55.1 bits (131), Expect = 4e-08
Identities = 40/83 (48%), Positives = 44/83 (52%), Gaps = 2/83 (2%)
Frame = +2
Query: 89 QQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQ 148
Q+QQ QQ Q S Q QQQ H +Q+QQ L Q+Q Q QQQ Q Q QQQQ Q
Sbjct: 53 QEQQLMQQHQQMLSYFQPQQQLLPH-LQLQQQLQQQQLAQLQQQLSQLQLTLLQQQQLTQ 229
Query: 149 HQQQQ--QQQQQQQQQQGRDRAH 169
QQQQ Q QQQ Q Q H
Sbjct: 230 LQQQQLAQLQQQLAQLQLTQHQH 298
Score = 52.0 bits (123), Expect = 3e-07
Identities = 32/68 (47%), Positives = 34/68 (49%)
Frame = +2
Query: 96 QPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQ 155
+P Q+ QQ QQ Q QQ LL QQQ QQQQ Q QQQ Q QQQQ
Sbjct: 41 EPSSQEQQLMQQHQQMLSYFQPQQQLLPHLQLQQQLQQQQLAQLQQQLSQLQLTLLQQQQ 220
Query: 156 QQQQQQQQ 163
Q QQQQ
Sbjct: 221 LTQLQQQQ 244
Score = 49.3 bits (116), Expect = 2e-06
Identities = 33/73 (45%), Positives = 38/73 (51%)
Frame = +2
Query: 79 IETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQ 138
++ Q + +QQ Q Q QQ Q QQQQ Q+Q Q LQ Q Q Q QQQ
Sbjct: 146 LQQQQLAQLQQQLSQLQLTLLQQQQLTQLQQQQLAQLQQQLAQLQLT-QHQHTQLQQQLL 322
Query: 139 QQQQQQQQPQHQQ 151
QQQ QQ PQHQQ
Sbjct: 323 PQQQFQQLPQHQQ 361
Score = 27.3 bits (59), Expect = 8.3
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 409 MLMKLKLAQLQHQQQQNANPQQQQL---QQQHSLSNQQ--SQSANHNMHQQDNKVGGGGG 463
+L + +L QLQ QQ Q QL Q QH+ QQ Q + Q VG G G
Sbjct: 203 LLQQQQLTQLQQQQLAQLQQQLAQLQLTQHQHTQLQQQLLPQQQFQQLPQHQQMVGEGMG 382
>AV422734
Length = 448
Score = 59.3 bits (142), Expect = 2e-09
Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 26/121 (21%)
Frame = +1
Query: 80 ETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQ------ 133
E + + + Q QQQQ Q QQ QQQQQQQQH + +QQ LQ+Q QQQQQ
Sbjct: 76 EAKALHQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQ--LQKQQQQQQQAAAISRFP 249
Query: 134 ---------------QQQQQQQQQQ-----QQQPQHQQQQQQQQQQQQQQGRDRAHLLNG 173
QQ Q P QQQQQQQQ QQ + + ++
Sbjct: 250 SSIDAHLRPIRPINLQQNPNPNPNNPILNLHQNPNSNHLQQQQQQQQPQQQQQQQKMVRP 429
Query: 174 G 174
G
Sbjct: 430 G 432
Score = 55.5 bits (132), Expect = 3e-08
Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Frame = +1
Query: 113 HQMQMQQMLLQRQHQQQQQQQQQQQQQ--QQQQQQQPQH----QQQQQQQQQQQQ 161
H + L +QHQ QQQQ QQ QQQ QQQQQQ QH QQ Q+QQQQQQQ
Sbjct: 61 HTKMEEAKALHQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQ 225
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 131 QQQQQQQQQQQQQQQQPQHQQQQQQ---QQQQQQQQ 163
+ ++ + QQ Q QQ QHQQ QQQ QQQQQQQQ
Sbjct: 67 KMEEAKALHQQHQHQQQQHQQHQQQLMLQQQQQQQQ 174
Score = 34.3 bits (77), Expect = 0.068
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 412 KLKLAQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNK 457
K++ A+ HQQ Q+ Q QQ QQQ L QQ Q + + QQ K
Sbjct: 67 KMEEAKALHQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQK 204
Score = 33.5 bits (75), Expect = 0.12
Identities = 20/41 (48%), Positives = 24/41 (57%), Gaps = 3/41 (7%)
Frame = +1
Query: 126 HQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQ---QQQQQQQ 163
H + ++ + QQ Q QQQQ QQ QQQ QQQQQQQ
Sbjct: 61 HTKMEEAKALHQQHQHQQQQH----QQHQQQLMLQQQQQQQ 171
Score = 32.7 bits (73), Expect = 0.20
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 417 QLQHQQ-QQNANPQQQQLQQQHSLSNQQSQSANHNMHQ 453
Q QHQQ QQ QQQQ QQQH L QQ Q Q
Sbjct: 112 QQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQ 225
Score = 32.0 bits (71), Expect = 0.34
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Frame = +1
Query: 339 QQHQQQLMLAQQNLASPSASDDSRRLRMLLNPRNMGVSKDGLSNPVGDVVSNVGSPLQAG 398
QQHQQQLML QQ ++ +LL + + + S++ + L+
Sbjct: 124 QQHQQQLMLQQQQ--------QQQQHFLLLQQLQKQQQQQQQAAAISRFPSSIDAHLRPI 279
Query: 399 GP------PFPRGDPDMLMKLKLAQLQH--QQQQNANPQQQQLQQQ 436
P P P + +L + H QQQQ PQQQQ QQ+
Sbjct: 280 RPINLQQNPNPNPNNPILNLHQNPNSNHLQQQQQQQQPQQQQQQQK 417
Score = 30.0 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 91 QQQQQQPQPQQSPHQQQQQQQQHQMQM 117
QQQQQQ QPQQ QQ+ + + M++
Sbjct: 367 QQQQQQQQPQQQQQQQKMVRPGNPMEL 447
>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
factor PosF21 (AtbZIP59), partial (17%)
Length = 570
Score = 59.3 bits (142), Expect = 2e-09
Identities = 34/68 (50%), Positives = 38/68 (55%)
Frame = +1
Query: 94 QQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQ 153
QQ S H QQ Q+Q+ Q+ Q QQ QQQQQQQQQ QQPQ Q QQ
Sbjct: 37 QQFYPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQ 216
Query: 154 QQQQQQQQ 161
QQQ+Q QQ
Sbjct: 217 QQQEQHQQ 240
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/68 (47%), Positives = 36/68 (52%)
Frame = +1
Query: 103 PHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQ 162
PH Q QQ+ + Q QQ Q Q QQ QQQQQQQQ QQ QQQ QQQQQ+
Sbjct: 49 PHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQE 228
Query: 163 QGRDRAHL 170
Q + L
Sbjct: 229 QHQQSGDL 252
Score = 55.8 bits (133), Expect = 2e-08
Identities = 34/62 (54%), Positives = 38/62 (60%)
Frame = +1
Query: 90 QQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQH 149
QQ QQ Q PQ+ QQHQ Q QQ + Q+Q QQQQ QQ QQQ QQQQQ+ QH
Sbjct: 85 QQFQQLQIHPQK--------HQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQE--QH 234
Query: 150 QQ 151
QQ
Sbjct: 235 QQ 240
Score = 50.8 bits (120), Expect = 7e-07
Identities = 31/70 (44%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 108 QQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQ----QQQQQQQQ 163
QQ H M +L +Q QQ Q Q+ QQ Q Q QQ Q QQQQQQ Q QQQ QQ
Sbjct: 37 QQFYPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQ 216
Query: 164 GRDRAHLLNG 173
+ H +G
Sbjct: 217 QQQEQHQQSG 246
Score = 49.3 bits (116), Expect = 2e-06
Identities = 32/78 (41%), Positives = 40/78 (51%)
Frame = +1
Query: 63 FIARTNEKHSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLL 122
F + H+ +AA + I ++ QQ Q Q Q P QQQQQQQQ +Q
Sbjct: 43 FYPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQF----QQPIQQQQQQQQQPIQ------ 192
Query: 123 QRQHQQQQQQQQQQQQQQ 140
Q QQQ QQQQQ+Q QQ
Sbjct: 193 --QPQQQMQQQQQEQHQQ 240
Score = 33.9 bits (76), Expect = 0.089
Identities = 19/41 (46%), Positives = 19/41 (46%)
Frame = +1
Query: 414 KLAQLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQ 454
K Q QHQ QQ QQQQ QQ QQ Q HQQ
Sbjct: 118 KHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQEQHQQ 240
Score = 31.6 bits (70), Expect = 0.44
Identities = 19/47 (40%), Positives = 25/47 (52%), Gaps = 5/47 (10%)
Frame = +1
Query: 415 LAQLQHQQQQNANPQQQQLQQQHSLSNQQS-----QSANHNMHQQDN 456
+ Q Q QQQQ QQQ+QQQ +QQS +SA + +DN
Sbjct: 154 IQQQQQQQQQPIQQPQQQMQQQQQEQHQQSGDLKMRSATSSPSPKDN 294
>BP038344
Length = 525
Score = 55.8 bits (133), Expect = 2e-08
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +2
Query: 603 FSELNSVRASTNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVR 662
+ L ++ A V C FS+DG LLAS DK +++W + +L L HS I+D+
Sbjct: 68 YRHLKTLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLSLLHRLTGHSEGISDLA 247
Query: 663 FSPSMPRLATSSYDKTVRVWD 683
+S + ++S D+T+R+WD
Sbjct: 248 WSSDSHYICSASDDRTLRIWD 310
Score = 28.9 bits (63), Expect = 2.8
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = +2
Query: 650 TLEEHSLLITDVRFSPSMPRLATSSYDKTVRVWDVDNVS 688
TL H + V+FS LA++S DKT+ +W +S
Sbjct: 83 TLTAHDAAVACVKFSNDGTLLASASLDKTLIIWSSATLS 199
>AV779571
Length = 538
Score = 54.7 bits (130), Expect = 5e-08
Identities = 35/71 (49%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 90 QQQQQQQPQPQQ--SPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQP 147
Q Q QQ QPQQ +Q+ QQ Q Q +QQ L Q QH Q Q QQQQQQQQ
Sbjct: 115 QAQM*QQSQPQQVFQNNQENQQLLQSQSHLQQHL-QHQHSFNGQTQNHNHNQQQQQQQQQ 291
Query: 148 QHQQQQQQQQQ 158
Q QQQ QQ
Sbjct: 292 QTQQQVVDNQQ 324
Score = 50.4 bits (119), Expect = 9e-07
Identities = 28/64 (43%), Positives = 32/64 (49%)
Frame = +1
Query: 98 QPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQ 157
Q Q Q QQ Q+ + QQ+L + H QQ Q Q Q Q Q QQQQQQQQ
Sbjct: 115 QAQM*QQSQPQQVFQNNQENQQLLQSQSHLQQHLQHQHSFNGQTQNHNHNQQQQQQQQQQ 294
Query: 158 QQQQ 161
QQQ
Sbjct: 295 TQQQ 306
Score = 49.3 bits (116), Expect = 2e-06
Identities = 36/94 (38%), Positives = 37/94 (39%), Gaps = 17/94 (18%)
Frame = +1
Query: 90 QQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQ--QQQQ-- 145
Q Q+ Q Q H QQ Q QH Q H QQQQQQQQQQ QQQ QQ
Sbjct: 157 QNNQENQQLLQSQSHLQQHLQHQHSFNGQTQ--NHNHNQQQQQQQQQQTQQQVVDNQQIG 330
Query: 146 -------------QPQHQQQQQQQQQQQQQQGRD 166
QPQ Q Q QQQ D
Sbjct: 331 NAGSTMSQFVSAPQPQSSPTQAQSSLSQQQSFSD 432
Score = 44.3 bits (103), Expect = 7e-05
Identities = 31/77 (40%), Positives = 37/77 (47%), Gaps = 10/77 (12%)
Frame = +1
Query: 108 QQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQ----------QQQQQPQHQQQQQQQQ 157
Q Q Q Q QQ+ + +Q+ QQ Q Q QQ Q Q +QQQQQQQQ
Sbjct: 115 QAQM*QQSQPQQVF--QNNQENQQLLQSQSHLQQHLQHQHSFNGQTQNHNHNQQQQQQQQ 288
Query: 158 QQQQQQGRDRAHLLNGG 174
QQ QQQ D + N G
Sbjct: 289 QQTQQQVVDNQQIGNAG 339
Score = 31.6 bits (70), Expect = 0.44
Identities = 22/60 (36%), Positives = 24/60 (39%)
Frame = +1
Query: 80 ETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQ 139
+TQ +QQQQQQQQ QQ QQ M Q Q Q Q QQQ
Sbjct: 241 QTQNHNHNQQQQQQQQQQTQQQVVDNQQIGNAGSTMSQFVSAPQPQSSPTQAQSSLSQQQ 420
Score = 30.8 bits (68), Expect = 0.75
Identities = 21/90 (23%), Positives = 31/90 (34%)
Frame = +1
Query: 64 IARTNEKHSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQ 123
+ + N+++ ++ S Q + Q Q QQQQQQQ Q + +
Sbjct: 151 VFQNNQENQQLLQSQSHLQQHLQHQHSFNGQTQNHNHNQQQQQQQQQQTQQQVVDNQQIG 330
Query: 124 RQHQQQQQQQQQQQQQQQQQQQQPQHQQQQ 153
Q Q Q Q Q QQQ
Sbjct: 331 NAGSTMSQFVSAPQPQSSPTQAQSSLSQQQ 420
Score = 28.5 bits (62), Expect = 3.7
Identities = 14/34 (41%), Positives = 16/34 (46%)
Frame = +1
Query: 420 HQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQ 453
H Q QQQQ QQ + NQQ +A M Q
Sbjct: 253 HNHNQQQQQQQQQQTQQQVVDNQQIGNAGSTMSQ 354
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +1
Query: 418 LQHQ-----QQQNANPQQQQLQQQHSLSNQQ 443
LQHQ Q QN N QQQ QQQ + QQ
Sbjct: 214 LQHQHSFNGQTQNHNHNQQQQQQQQQQTQQQ 306
>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
Length = 841
Score = 53.9 bits (128), Expect = 8e-08
Identities = 34/75 (45%), Positives = 37/75 (49%)
Frame = +1
Query: 88 EQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQP 147
+ Q Q Q QPQ PH Q Q Q Q Q Q +Q+ Q Q Q Q Q QQ Q Q Q
Sbjct: 37 QYQPQPHLQHQPQHHPHFQPHPQPQLQSQPQPQHIQQ--SQPQPQSQPQHIQQPQPQPQL 210
Query: 148 QHQQQQQQQQQQQQQ 162
QH QQ Q Q Q Q Q
Sbjct: 211 QHIQQSQPQPQFQNQ 255
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/85 (36%), Positives = 35/85 (40%)
Frame = +1
Query: 71 HSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQ 130
H+E + Q + Q QP PQ P Q Q Q QH Q Q + QQ
Sbjct: 16 HNEPQPLQYQPQPHLQHQPQHHPHFQPHPQ--PQLQSQPQPQHIQQSQPQPQSQPQHIQQ 189
Query: 131 QQQQQQQQQQQQQQQQPQHQQQQQQ 155
Q Q Q Q QQ Q QPQ Q Q Q
Sbjct: 190 PQPQPQLQHIQQSQPQPQFQNQHFQ 264
>TC14737 similar to UP|Q9LEB3 (Q9LEB3) RNA binding protein 47, partial (32%)
Length = 803
Score = 52.4 bits (124), Expect = 2e-07
Identities = 35/89 (39%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Frame = +3
Query: 90 QQQQQQQPQPQQSPHQQQQQQQQHQ------MQMQQMLLQRQHQQQQQQQQQQQQQQQQQ 143
Q QQ QPQQ QQQQ M QQM++ QH Q QQQQ
Sbjct: 159 QNAPPQQQQPQQWAAQQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPHHQQQQ 338
Query: 144 Q--------QQPQHQQQQQQQQQQQQQQG 164
Q QHQQ QQQQ+QQQ G
Sbjct: 339 AAAAAAGAVPQQQHQQHHHQQQQKQQQGG 425
Score = 43.9 bits (102), Expect = 9e-05
Identities = 29/92 (31%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Frame = +3
Query: 94 QQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQ 153
Q P QQ P Q QQQQ QQQ Q QP HQQQQ
Sbjct: 159 QNAPPQQQQPQQWAAQQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPHHQQQQ 338
Query: 154 QQQ-------QQQQQQQGRDRAHLLNGGGANG 178
QQQ QQ + GG G
Sbjct: 339 AAAAAAGAVPQQQHQQHHHQQQQKQQQGGGGG 434
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 74 VAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQ 133
+A Y T + ++Q Q P H Q QQQ + +Q QQ Q
Sbjct: 219 MAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPHHQQQQAAAAAAGAVPQQQHQQHHHQ 398
Query: 134 QQQQQQQ 140
QQQ+QQQ
Sbjct: 399 QQQKQQQ 419
Score = 32.3 bits (72), Expect = 0.26
Identities = 31/94 (32%), Positives = 33/94 (34%), Gaps = 39/94 (41%)
Frame = +3
Query: 121 LLQRQHQQQQQQQQQQQQQQQ-------------QQQQ----------------QPQHQQ 151
L Q QQQQ QQ QQQQ QQQ QP HQQ
Sbjct: 153 LNQNAPPQQQQPQQWAAQQQQWMAMQYPATAMAMMQQQMMMYPQHYMPYVHHHYQPHHQQ 332
Query: 152 QQ----------QQQQQQQQQQGRDRAHLLNGGG 175
QQ QQQ QQ Q + + GGG
Sbjct: 333 QQAAAAAAGAVPQQQHQQHHHQQQQKQQQGGGGG 434
Score = 30.8 bits (68), Expect = 0.75
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 420 HQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNKVGGGGG 463
H Q + QQQ QQ +H+ QQ + GGGGG
Sbjct: 303 HHHYQPHHQQQQAAAAAAGAVPQQQHQQHHHQQQQKQQQGGGGG 434
>AW719943
Length = 508
Score = 50.1 bits (118), Expect = 1e-06
Identities = 28/47 (59%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 97 PQPQQSPHQQQQ--QQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQ 141
PQ QQ P QQQQ Q QQ Q L Q QQ QQQQQQQQQQ Q
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/101 (37%), Positives = 51/101 (49%), Gaps = 6/101 (5%)
Frame = +2
Query: 128 QQQQQQQQQQQQQQQQQQQPQHQ------QQQQQQQQQQQQQGRDRAHLLNGGGANGLVG 181
QQQQQ QQQQQ Q QQQ P Q QQQQ QQQQQQQQ + + L
Sbjct: 86 QQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLFLFTND------R 247
Query: 182 NPSTANAIATKMYEERLKLPLQRDSLEDAAMKQRFGDQLLD 222
P++ + ++ + K+ LQ +E+ ++ R Q LD
Sbjct: 248 TPASYGTNWSDLHPDSQKILLQ---IEERILEYRDESQRLD 361
Score = 49.3 bits (116), Expect = 2e-06
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = +2
Query: 92 QQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQ 140
QQQQQPQ QQ Q Q QQQ Q + +Q Q QQQQQQQQQQ Q
Sbjct: 86 QQQQQPQQQQ---QLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 48.5 bits (114), Expect = 3e-06
Identities = 28/46 (60%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Frame = +2
Query: 110 QQQHQMQMQQMLLQRQHQQQQQQQ-----QQQQQQQQQQQQQPQHQ 150
QQQ Q Q QQ L Q Q Q QQ QQQQ QQQQQQQQ QHQ
Sbjct: 86 QQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 48.5 bits (114), Expect = 3e-06
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 102 SPHQQQQQQQQHQM-QMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQ 148
+P QQQQ QQQ Q+ Q QQ +Q+ QQQQ QQQQQQQQQQ Q
Sbjct: 80 TPQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 46.6 bits (109), Expect = 1e-05
Identities = 31/67 (46%), Positives = 35/67 (51%)
Frame = +2
Query: 71 HSEVAASYIETQLIKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQ 130
HS ++ S T + + QQQQQ QPQ QQSP QQ Q Q QQ QQQ
Sbjct: 50 HSTMSFSLFSTPQQQQQPQQQQQLFQPQ-QQSPFQQNSLFNSQQQQFQQ--------QQQ 202
Query: 131 QQQQQQQ 137
QQQQQ Q
Sbjct: 203 QQQQQHQ 223
Score = 45.1 bits (105), Expect = 4e-05
Identities = 25/46 (54%), Positives = 26/46 (56%)
Frame = +2
Query: 106 QQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQPQHQQ 151
QQQQQ Q Q Q+ Q Q QQ QQQQ QQQQQQQ Q Q
Sbjct: 86 QQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 33.5 bits (75), Expect = 0.12
Identities = 18/41 (43%), Positives = 20/41 (47%)
Frame = +2
Query: 417 QLQHQQQQNANPQQQQLQQQHSLSNQQSQSANHNMHQQDNK 457
Q QQQQ PQQQ QQ+SL N Q Q QQ +
Sbjct: 95 QQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQ 217
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 401 PFPRGDPDMLMKLKLAQLQHQQQQNA--NPQQQQLQQQHSLSNQQSQ 445
P + P +L Q Q QQN+ N QQQQ QQQ QQ Q
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 27.3 bits (59), Expect = 8.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 418 LQHQQQQNANPQQQQLQQQHSL 439
L + QQQ QQQQ QQQH L
Sbjct: 161 LFNSQQQQFQQQQQQQQQQHQL 226
>TC11756 weakly similar to GB|AAH01494.1|16306637|BC001494 U5 snRNP-specific
40 kDa protein (hPrp8-binding) {Homo sapiens;} , partial
(43%)
Length = 719
Score = 49.3 bits (116), Expect = 2e-06
Identities = 23/66 (34%), Positives = 39/66 (58%), Gaps = 1/66 (1%)
Frame = +1
Query: 621 FSSDGKLLASGGHDKKVVLWYTDS-LKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTV 679
F+ G ++ASG HD+++ LW K L+ H + D+ ++ ++ ++S DKTV
Sbjct: 328 FNPAGTVIASGSHDREIFLWNVHGECKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTV 507
Query: 680 RVWDVD 685
RVWDV+
Sbjct: 508 RVWDVE 525
>AV415922
Length = 422
Score = 48.1 bits (113), Expect = 5e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3
Query: 125 QHQQQQQQQQQQQQQQQQQQQQPQHQQ 151
QHQQ+ QQQQQQQQQQQQQQQQP + Q
Sbjct: 168 QHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 40.0 bits (92), Expect = 0.001
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 125 QHQQQQQQQQQQQQQQQQQQQQPQHQQQQQQQ 156
Q Q Q QQ+ QQQQQQQQQQQ Q QQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 40.0 bits (92), Expect = 0.001
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = +3
Query: 122 LQRQHQQQQQQQQQQQQQQQQQQQQPQHQQQQQ 154
+Q Q Q QQ+ QQQQQQQQQQQQQ Q Q
Sbjct: 150 IQFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 40.0 bits (92), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3
Query: 137 QQQQQQQQQQPQHQQQQQQQQQQQQQQ 163
Q Q Q QQ+ Q QQQQQQQQQQQQQQ
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQ 233
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 131 QQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQ 162
Q Q Q QQ+ QQQQQ Q QQQQQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 129 QQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQ 160
Q Q Q QQ+ QQQQQQQ Q QQQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 128 QQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQQ 159
Q Q Q QQ+ QQQQQQQQ Q QQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 127 QQQQQQQQQQQQQQQQQQQQPQHQQQQQQQQQ 158
Q Q Q QQ+ QQQQQQQQQ Q QQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 132 QQQQQQQQQQQQQQQPQHQQQQQQQQQQQQQQ 163
Q Q Q QQ+ QQQQ Q QQQQQQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +3
Query: 130 QQQQQQQQQQQQQQQQQPQHQQQQQQQQQQQQ 161
Q Q Q QQ+ QQQQQQ Q QQQQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
Score = 38.1 bits (87), Expect = 0.005
Identities = 21/37 (56%), Positives = 23/37 (61%)
Frame = +3
Query: 135 QQQQQQQQQQQQPQHQQQQQQQQQQQQQQGRDRAHLL 171
Q Q Q QQ+ Q Q QQQQQQQQQQQQ + LL
Sbjct: 153 QFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ*SPLL 263
Score = 38.1 bits (87), Expect = 0.005
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 112 QHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQ 142
++ +Q Q Q++ QQQQQQQQQQQQQQQQ
Sbjct: 141 RYPIQFQGNQHQQR*QQQQQQQQQQQQQQQQ 233
Score = 37.7 bits (86), Expect = 0.006
Identities = 22/39 (56%), Positives = 23/39 (58%)
Frame = +3
Query: 107 QQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQ 145
Q Q QHQ + QQ QQQQQQQQQQQQQQ Q
Sbjct: 153 QFQGNQHQQR*QQ-------QQQQQQQQQQQQQQPSNSQ 248
Score = 35.4 bits (80), Expect = 0.030
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = +3
Query: 98 QPQQSPHQQQQQQQQHQMQMQQMLLQRQHQQQQQQQQQQQQQQQQQQQQP 147
Q Q + HQQ+ QQQ QQQQQQQQQQQQQ Q P
Sbjct: 153 QFQGNQHQQR*QQQ---------------QQQQQQQQQQQQQPSNSQ*SP 257
Score = 32.7 bits (73), Expect = 0.20
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 84 IKAREQQQQQQQQPQPQQSPHQQQQQQQQHQMQMQQMLL 122
I+ + Q QQ+ Q Q QQ QQQQQQQ Q +LL
Sbjct: 150 IQFQGNQHQQR*QQQQQQQQQQQQQQQQPSNSQ*SPLLL 266
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 419 QHQQ--QQNANPQQQQLQQQHSLSNQQ 443
QHQQ QQ QQQQ QQQ SN Q
Sbjct: 168 QHQQR*QQQQQQQQQQQQQQQQPSNSQ 248
>TC7876 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1379
Score = 48.1 bits (113), Expect = 5e-06
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = +3
Query: 613 TNKVVCSHFSSDGKLLASGGHDKKVVLWYTDSLKQKATLEE---HSLLITDVRFSPS--M 667
T V+ FS D + + S D+ + LW T + K T+++ HS ++ VRFSPS
Sbjct: 384 TKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQDNDAHSDWVSCVRFSPSTLQ 560
Query: 668 PRLATSSYDKTVRVWDVDN 686
P + ++S+D+TV+VW++ N
Sbjct: 561 PTIVSASWDRTVKVWNLTN 617
Score = 37.0 bits (84), Expect = 0.010
Identities = 22/67 (32%), Positives = 40/67 (58%)
Frame = +3
Query: 622 SSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLATSSYDKTVRV 681
S DG L ASGG D ++LW K+ +L+ S +I + FSP+ L ++ + ++++
Sbjct: 675 SPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGS-IIHALCFSPNRYWLCAAT-ETSIKI 848
Query: 682 WDVDNVS 688
WD+++ S
Sbjct: 849 WDLESKS 869
Score = 34.7 bits (78), Expect = 0.052
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +3
Query: 619 SHF------SSDGKLLASGGHDKKVVLWYTDSLKQKATLEEHSLLITDVRFSPSMPRLAT 672
SHF SSDG+ SG D ++ LW + H+ + V FS ++ +
Sbjct: 258 SHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVS 437
Query: 673 SSYDKTVRVWD 683
+S D+T+++W+
Sbjct: 438 ASRDRTIKLWN 470
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.310 0.126 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,283,129
Number of Sequences: 28460
Number of extensions: 149783
Number of successful extensions: 6624
Number of sequences better than 10.0: 373
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4039
length of query: 688
length of database: 4,897,600
effective HSP length: 97
effective length of query: 591
effective length of database: 2,136,980
effective search space: 1262955180
effective search space used: 1262955180
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144617.11