BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.4 - phase: 0 /pseudo
(826 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC8193 similar to UP|Q9M5J4 (Q9M5J4) Beta-galactosidase (Lactas... 641 0.0
TC14642 homologue to UP|O65761 (O65761) Beta-galactosidase (Lac... 305 e-142
AV781316 329 1e-90
AV777366 274 4e-74
TC17996 similar to UP|O23243 (O23243) Beta-galactosidase like pr... 262 1e-70
CB827272 220 6e-58
BP042550 195 3e-50
TC16176 similar to UP|Q9M5J4 (Q9M5J4) Beta-galactosidase (Lacta... 191 5e-49
AV778720 160 8e-40
AU089374 130 1e-34
AV409382 129 2e-30
TC11204 similar to GB|AAO64909.1|29029060|BT005974 At1g77410 {Ar... 106 1e-23
TC16086 similar to UP|Q93X57 (Q93X57) Beta-galactosidase (Lacta... 105 4e-23
BU494223 100 1e-22
AV781248 94 7e-20
AU089231 87 1e-17
AV767255 86 2e-17
AU240090 82 3e-16
TC12390 79 3e-15
TC15316 similar to UP|Q9ZRV9 (Q9ZRV9) Beta-galactosidase (Lacta... 68 7e-12
>TC8193 similar to UP|Q9M5J4 (Q9M5J4) Beta-galactosidase (Lactase) ,
partial (80%)
Length = 2257
Score = 641 bits (1654), Expect = 0.0
Identities = 312/590 (52%), Positives = 400/590 (66%), Gaps = 10/590 (1%)
Frame = +2
Query: 142 NNEPFKAEMKRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNIDTHDARAAKSYIDWA 201
+N PFKA M++FT KIV+MMK E L+ +QGGPII+SQIENEYG ++ K+Y WA
Sbjct: 5 DNGPFKAAMQKFTTKIVNMMKAEKLFQTQGGPIIMSQIENEYGPVEWETGAPGKAYTKWA 184
Query: 202 ASMATSLDTGVPWIMCQQANAPDPIINTCNSFYCDQFTPNSDNKPKMWTENWSGWFLAFG 261
A MA L+TGVPWIMC+Q +APDP+I+TCN++YC++FTPN + KPKMWTENW+GW+ +G
Sbjct: 185 AQMAVGLNTGVPWIMCKQEDAPDPLIDTCNAYYCEKFTPNKNYKPKMWTENWTGWYTDYG 364
Query: 262 GAVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYG 321
VP RP ED+AF+VARF Q GG+F NYYMYHGGTNFGRT+ G FI+TSY+YDAPIDEYG
Sbjct: 365 SPVPRRPAEDMAFSVARFIQNGGSFVNYYMYHGGTNFGRTSSGLFIATSYEYDAPIDEYG 544
Query: 322 DIRQPKWGHLKDLHKAIKLCEEALIASDPTITSPGPNLETAVYKTG-AVCSAFLANIG-M 379
+ +PKWGHL+DLHKAIK CE AL++ DPT+T G LE V+KT C+AFLAN
Sbjct: 545 LLNEPKWGHLRDLHKAIKQCEPALVSVDPTLTLLGKGLEAHVFKTSFGACAAFLANYDTT 724
Query: 380 SDATVTFNGNSYHLPGWSVSILPDCKNVVLNTAKVNTASMISSFATESLKEKVDSLDSSS 439
S TV F Y+LP WS+SILPDCK V NTA+V +S ++K+ ++S+
Sbjct: 725 SSRTVKFGNGQYNLPPWSISILPDCKTDVYNTARV---------GVKSWEKKMTPVNSAF 877
Query: 440 SGWSWISEPVGISTPDAFTKSGLLEQINTTADRSDYLWYSLSIVYEDNA-----GDQPVL 494
+ S+ +P S D+ T L EQ+N T D SDYLWY + + N G PVL
Sbjct: 878 NWLSYNEQPASSSGDDSLTGYALWEQVNVTRDSSDYLWYMTDVNIDSNEGLIKNGQSPVL 1057
Query: 495 HIESLGHALHAFVNGKLAGSKAGSSGNAKVNVDIPITLVTGKNTIDLLSLTVGLQNYGAF 554
S GH LH FVNG+L+G+ G N K+ + L G N I LLS++VGL N G+
Sbjct: 1058TAMSAGHVLHVFVNGQLSGTVYGGLKNPKLTFSDSVKLRVGNNKISLLSVSVGLSNVGSH 1237
Query: 555 YDTVGAGITGPVILKGLKNGSSVDLTSQQWTYQVGLQGEFVGL---SSGNVGQWNSQSNL 611
++T G+ GPV LKGL G+ DL+ Q+W+Y+VGL+GE + L S + QW S +
Sbjct: 1238FETWNVGVLGPVTLKGLNEGTR-DLSRQKWSYKVGLKGEALNLHTTSGSSSVQWTQGSLV 1414
Query: 612 PANQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYISPNSGCTDSCN 671
QPLTWYK F AP+ ++P+A+D T MGKGE W+NGQSIGR+WP YI+ G SCN
Sbjct: 1415AKKQPLTWYKATFNAPASNDPLALDMTSMGKGEVWINGQSIGRHWPGYIA--RGSCGSCN 1588
Query: 672 YRGTYSASKCLKNCGKPSQTLYHVPRAWLKPDSNTFVLFEESGGDPTKIS 721
Y G Y+ +KC NCG+PSQ YH+PR+WL P N V+ EE GGDPT IS
Sbjct: 1589YAGYYTDTKCRTNCGEPSQRWYHIPRSWLNPSGNLVVVLEEFGGDPTGIS 1738
>TC14642 homologue to UP|O65761 (O65761) Beta-galactosidase (Lactase)
(Fragment) , partial (78%)
Length = 2239
Score = 305 bits (781), Expect(2) = e-142
Identities = 157/342 (45%), Positives = 208/342 (59%), Gaps = 5/342 (1%)
Frame = +1
Query: 489 GDQPVLHIESLGHALHAFVNGKLAGSKAGSSGNAKVNVDIPITLVTGKNTIDLLSLTVGL 548
G P L + S GHALH FVNG+L+G+ GS K+ + L G N I LLS+ VGL
Sbjct: 610 GKNPFLTVLSAGHALHVFVNGQLSGTAYGSLEFPKLTFSEGVKLRAGVNKISLLSVAVGL 789
Query: 549 QNYGAFYDTVGAGITGPVILKGLKNGSSVDLTSQQWTYQVGLQGEFVGL---SSGNVGQW 605
N G ++T AG+ GP+ L GL G DLT Q+W+Y++GL+GE + L S + +W
Sbjct: 790 PNVGPHFETWNAGVLGPITLNGLNEGRR-DLTWQKWSYKIGLKGESLSLHSLSGSSSVEW 966
Query: 606 NSQSNLPANQPLTWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYISPNSG 665
+ QPLTWYKT F AP+G P+A+D MGKG+ W+NGQS+GRYWP Y + SG
Sbjct: 967 IQGYLVSRRQPLTWYKTTFDAPAGVAPLALDMESMGKGQVWINGQSLGRYWPAYKA--SG 1140
Query: 666 CTDSCNYRGTYSASKCLKNCGKPSQTLYHVPRAWLKPDSNTFVLFEESGGDPTKISFGTK 725
D CNY GTY KC NCG+ SQ YHVP +WLKP N V+FEE GGDP IS +
Sbjct: 1141SCDYCNYAGTYHEKKCGSNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGISLVRR 1320
Query: 726 QIESVCSHVTESHPPPVD-TWNSNAESERKVGPVLSLECPYPNQAISSIKFASFGTPRGT 784
I+S C+ + E P V ++ + V P L C P Q ISSIKFASFGTP G+
Sbjct: 1321DIDSACADIYEWQPNLVSYQMQASGKVSAPVRPKAHLSCG-PGQKISSIKFASFGTPVGS 1497
Query: 785 CGNYNHGSCSSNRALSIVQKACIGSSSCNIGVSINTF-GNPC 825
CGNY+ GSC ++++ +++C+G + C + V+ F G+PC
Sbjct: 1498CGNYHEGSCHAHKSYDAFERSCVGQNQCAVTVAPEIFGGDPC 1623
Score = 218 bits (556), Expect(2) = e-142
Identities = 113/206 (54%), Positives = 137/206 (65%), Gaps = 2/206 (0%)
Frame = +3
Query: 286 FQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGDIRQPKWGHLKDLHKAIKLCEEAL 345
F NYYMYHGGTNFGRT GGPFI+TSYDYDAP+DEYG ++QPKWGHLKDLH+AIKLCE AL
Sbjct: 3 FVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLQQPKWGHLKDLHRAIKLCEPAL 182
Query: 346 IASDPTITSPGPNLETAVYKT-GAVCSAFLANIG-MSDATVTFNGNSYHLPGWSVSILPD 403
++ DPT+T G E V+K+ C+AFLAN S ATV F Y+LP WS+SILP+
Sbjct: 183 VSGDPTVTRLGNYGEAHVFKSKSGACAAFLANYNPKSYATVVFGNQHYNLPPWSISILPN 362
Query: 404 CKNVVLNTAKVNTASMISSFATESLKEKVDSLDSSSSGWSWISEPVGISTPDAFTKSGLL 463
CK+ V NTA+V + S T+ +V S W +E + +FT +GLL
Sbjct: 363 CKHTVYNTARVGSQS------TQMKMTRVPIHGGLS--WRSFNEETTTTDDSSFTVTGLL 518
Query: 464 EQINTTADRSDYLWYSLSIVYEDNAG 489
EQIN T D SDYLWYS +V N G
Sbjct: 519 EQINATRDLSDYLWYSTDVVINPNEG 596
>AV781316
Length = 574
Score = 329 bits (843), Expect = 1e-90
Identities = 157/179 (87%), Positives = 164/179 (90%)
Frame = +1
Query: 1 MRGTQIVFVLLWFLGVYVPASFCSNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDL 60
MR TQI+ VL FL P FC+NVTYDHRALVIDGKRRVL+SGSIHYPRSTP+MWPDL
Sbjct: 37 MRATQIIMVLFRFLWCLCPCLFCTNVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDL 216
Query: 61 IQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYVCA 120
IQKSKDGG+DVIETYVFWNLHEPVRGQYNFEGRGDLV FVKAVAAAGLYVHLRIGPY CA
Sbjct: 217 IQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRGDLVQFVKAVAAAGLYVHLRIGPYACA 396
Query: 121 EWNYGGFPLWLHFIAGIKFRTNNEPFKAEMKRFTAKIVDMMKQENLYASQGGPIILSQI 179
EWNYGGFPL LHFI GI+FRTNNEPFKAEMKRFTAKIVDMMKQENLYA +GGPIILSQI
Sbjct: 397 EWNYGGFPLGLHFIPGIQFRTNNEPFKAEMKRFTAKIVDMMKQENLYAREGGPIILSQI 573
>AV777366
Length = 637
Score = 274 bits (701), Expect = 4e-74
Identities = 125/196 (63%), Positives = 158/196 (79%)
Frame = -3
Query: 9 VLLWFLGVYVPASFCSNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGG 68
++L+ L + ++V+YDH+A+ I+G+RR+L+SGSIHYPRSTP+MWPDLIQK+K+GG
Sbjct: 590 LVLFVLACSLLGHAAASVSYDHKAITINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGG 411
Query: 69 IDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYVCAEWNYGGFP 128
+DVI+TYVFWN HEP +G+Y FEG DLV F+K V AGLYVHLRIGPYVCAEWN+GGFP
Sbjct: 410 LDVIQTYVFWNGHEPSQGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFP 231
Query: 129 LWLHFIAGIKFRTNNEPFKAEMKRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNIDT 188
+WL ++ GI FRT+N PFK +M+RFT KIV+MMK E LY +QGGPIILSQIENEYG ++
Sbjct: 230 VWLKYVPGISFRTDNGPFKYQMQRFTNKIVNMMKAERLYETQGGPIILSQIENEYGPMEY 51
Query: 189 HDARAAKSYIDWAASM 204
K+Y WAASM
Sbjct: 50 EIGSPGKAYSQWAASM 3
>TC17996 similar to UP|O23243 (O23243) Beta-galactosidase like protein
(Lactase) , partial (20%)
Length = 677
Score = 262 bits (670), Expect = 1e-70
Identities = 120/161 (74%), Positives = 138/161 (85%)
Frame = +3
Query: 24 SNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEP 83
S VTYD +AL+I+G+RR+L+SGSIHYPRSTP MW DLIQK+KDGG+DVIETYVFWN+HEP
Sbjct: 168 SAVTYDSKALLINGQRRILISGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEP 347
Query: 84 VRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYVCAEWNYGGFPLWLHFIAGIKFRTNN 143
+G YNFEGR DLV FVK + AGLY HLRIGPYVCAEWN+GGFP+WL ++ GI FRT+N
Sbjct: 348 SQGNYNFEGRYDLVRFVKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDN 527
Query: 144 EPFKAEMKRFTAKIVDMMKQENLYASQGGPIILSQIENEYG 184
EPFK M+ FT KIV MMK E+LY S GGPIILSQIENEYG
Sbjct: 528 EPFKRAMQGFTEKIVGMMKSEHLYESXGGPIILSQIENEYG 650
>CB827272
Length = 470
Score = 220 bits (561), Expect = 6e-58
Identities = 107/139 (76%), Positives = 124/139 (88%)
Frame = +1
Query: 455 DAFTKSGLLEQINTTADRSDYLWYSLSIVYEDNAGDQPVLHIESLGHALHAFVNGKLAGS 514
D+F++ GLLEQINTTADRSDYLWYSL I ED+AG Q VLHIESLGHALHAF+NGKLAGS
Sbjct: 52 DSFSRFGLLEQINTTADRSDYLWYSLRIDLEDDAGAQTVLHIESLGHALHAFINGKLAGS 231
Query: 515 KAGSSGNAKVNVDIPITLVTGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVILKGLKNG 574
G+ N+KVNV+IPITLV GKNTIDLLSLTVGLQ++G F+DT GA ITGPVILKGLKNG
Sbjct: 232 GKGNRDNSKVNVEIPITLVAGKNTIDLLSLTVGLQHFGPFFDTWGAXITGPVILKGLKNG 411
Query: 575 SSVDLTSQQWTYQVGLQGE 593
S++D +S+QWTYQ+GL+GE
Sbjct: 412 STLDFSSKQWTYQIGLKGE 468
>BP042550
Length = 489
Score = 195 bits (495), Expect = 3e-50
Identities = 87/123 (70%), Positives = 101/123 (81%)
Frame = +3
Query: 57 WPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGP 116
W DLIQK+K GG+DVI+TYVFWN+HEP G YNFEGR DLV F+K V GLYVHLRIGP
Sbjct: 3 WEDLIQKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGP 182
Query: 117 YVCAEWNYGGFPLWLHFIAGIKFRTNNEPFKAEMKRFTAKIVDMMKQENLYASQGGPIIL 176
YVCAEWN+GGFP+WL ++ GI FRT+N PFKA M+ FT KIV MMK E L+ SQGGPIIL
Sbjct: 183 YVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMRGFTQKIVQMMKNEKLFQSQGGPIIL 362
Query: 177 SQI 179
+Q+
Sbjct: 363 AQV 371
>TC16176 similar to UP|Q9M5J4 (Q9M5J4) Beta-galactosidase (Lactase) ,
partial (18%)
Length = 649
Score = 191 bits (484), Expect = 5e-49
Identities = 91/132 (68%), Positives = 105/132 (78%), Gaps = 2/132 (1%)
Frame = +1
Query: 7 VFVLLWFLG--VYVPASFCSNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKS 64
V V +WF YV AS VTYDH+A+++DGKRR+L+SGSIHYPRSTPQMWPDLIQK+
Sbjct: 265 VLVFMWFCSWFCYVTAS----VTYDHKAILVDGKRRILISGSIHYPRSTPQMWPDLIQKA 432
Query: 65 KDGGIDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYVCAEWNY 124
KDGGIDVI+TYVF N HEP G Y FE R DLV F+K V AGLYV+LRIGPYVCAEWN
Sbjct: 433 KDGGIDVIQTYVFGNGHEPSPGNYYFEDRLDLVKFIKIVQQAGLYVNLRIGPYVCAEWNL 612
Query: 125 GGFPLWLHFIAG 136
GGFP+WL ++ G
Sbjct: 613 GGFPVWLKYVPG 648
>AV778720
Length = 512
Score = 160 bits (405), Expect = 8e-40
Identities = 72/98 (73%), Positives = 85/98 (86%)
Frame = +1
Query: 25 NVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPV 84
NV+YD +AL+I+G+RRVL+SGSIHYPRSTP+MW DLIQK+K GGIDVI+TYVFW++HEP
Sbjct: 217 NVSYDRKALLINGQRRVLISGSIHYPRSTPEMWEDLIQKAKHGGIDVIDTYVFWDVHEPS 396
Query: 85 RGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYVCAEW 122
G YNFEGR DLV F+K V GLY +LRIGPYVCAEW
Sbjct: 397 PGNYNFEGRYDLVRFIKTVQKLGLYANLRIGPYVCAEW 510
>AU089374
Length = 694
Score = 130 bits (328), Expect(2) = 1e-34
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Frame = +3
Query: 566 VILKGLKNGSSVDLTSQQWTYQVGLQGEFVGLSSGNVGQWNSQSNLPANQP-LTWYKTNF 624
+ + GL +G +DL+ W +QVGL+GE + + + ++ P L+WYKTNF
Sbjct: 24 IFIIGLNSGK-IDLSLNGWGHQVGLKGEXNKIFTEKGSKKVEWKDVKGPGPVLSWYKTNF 200
Query: 625 VAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYISPNSGCTDSCNYRGTYSASKCLKN 684
P G +PVAI GMGKG W+NG+SIGR+W +Y+SP
Sbjct: 201 ATPEGRDPVAIRMEGMGKGMVWINGKSIGRHWMSYLSP---------------------- 314
Query: 685 CGKPSQTLYHVPRAWLKPDSNTFVLFEESGGDPTKISFGTKQIESVCSHVTESHPPPVDT 744
GKP+Q+ YH+PR++L N V+FEE P KI+ +++C +TE+HPP V +
Sbjct: 315 LGKPTQSEYHIPRSYLNSKDNLLVVFEEXVXXPXKIAILNVNRDTICXFITENHPPNVKS 494
Query: 745 WN 746
W+
Sbjct: 495 WS 500
Score = 33.9 bits (76), Expect(2) = 1e-34
Identities = 13/31 (41%), Positives = 20/31 (63%), Gaps = 1/31 (3%)
Frame = +2
Query: 766 PN-QAISSIKFASFGTPRGTCGNYNHGSCSS 795
PN + I +++FA FG P G CG + G C++
Sbjct: 566 PNXKTIKAVEFAXFGDPEGYCGKFTMGKCNA 658
>AV409382
Length = 430
Score = 129 bits (324), Expect = 2e-30
Identities = 56/78 (71%), Positives = 69/78 (87%)
Frame = +2
Query: 24 SNVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEP 83
S VTYD +A++I+G+RR+L+SGSIHYPRSTP MW DLIQK+K+GG+DVIETYVFWN+HEP
Sbjct: 197 STVTYDRKAILINGQRRILLSGSIHYPRSTPDMWEDLIQKAKEGGLDVIETYVFWNVHEP 376
Query: 84 VRGQYNFEGRGDLVGFVK 101
G YNFEG+ DLV F+K
Sbjct: 377 SPGNYNFEGKYDLVKFIK 430
>TC11204 similar to GB|AAO64909.1|29029060|BT005974 At1g77410 {Arabidopsis
thaliana;}, partial (13%)
Length = 568
Score = 106 bits (265), Expect = 1e-23
Identities = 58/150 (38%), Positives = 80/150 (52%), Gaps = 3/150 (2%)
Frame = +2
Query: 578 DLTSQQWTYQVGLQGEFVGL---SSGNVGQWNSQSNLPANQPLTWYKTNFVAPSGSNPVA 634
D+T+ W YQVGL GE + + S + QW S + + PLTWY+T F AP G++PV
Sbjct: 56 DVTNPSWGYQVGLLGEKLQIYTASGSSKVQWESFQS--ST*PLTWYQTTFDAPEGNDPVV 229
Query: 635 IDFTGMGKGEAWVNGQSIGRYWPTYISPNSGCTDSCNYRGTYSASKCLKNCGKPSQTLYH 694
++ MGKG WVNGQ IGRYW ++ +P+ G SQ YH
Sbjct: 230 LNLGSMGKGITWVNGQGIGRYWVSFHTPD----------------------GTSSQNWYH 343
Query: 695 VPRAWLKPDSNTFVLFEESGGDPTKISFGT 724
+PR+ LK N V+ EE G+P +I+ T
Sbjct: 344 IPRSILKSTGNLLVILEEESGNPLEITLDT 433
>TC16086 similar to UP|Q93X57 (Q93X57) Beta-galactosidase (Lactase) ,
partial (9%)
Length = 551
Score = 105 bits (261), Expect = 4e-23
Identities = 46/59 (77%), Positives = 55/59 (92%)
Frame = +3
Query: 767 NQAISSIKFASFGTPRGTCGNYNHGSCSSNRALSIVQKACIGSSSCNIGVSINTFGNPC 825
NQ ISSIKFAS+GTP GTCGN+ HG CSS++ALS+VQKACIGSSSC++GVSI+TFG+PC
Sbjct: 3 NQVISSIKFASYGTPAGTCGNFYHGRCSSHKALSLVQKACIGSSSCSVGVSIDTFGDPC 179
>BU494223
Length = 495
Score = 100 bits (249), Expect(2) = 1e-22
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Frame = +2
Query: 391 YHLPGWSVSILPDCKNVVLNTAKVNTASMISSFATESLKEKVDSLDSSSSGWSWISEPVG 450
Y LP WS+SILPDCK V NTAKV + +LK + S ++ S ++E
Sbjct: 20 YDLPPWSISILPDCKADVFNTAKVRVRTSKVQMIPVNLK--LFSWETYDEDLSSLAESSR 193
Query: 451 ISTPDAFTKSGLLEQINTTADRSDYLWYSLSIVYEDN-----AGDQPVLHIESLGHALHA 505
I+ P GLLEQ+N T D SDYLWY S+ + G QP ++++S GH +H
Sbjct: 194 ITAP------GLLEQLNVTRDSSDYLWYITSVDISSSESFLGGGHQPSINVQSAGHGIHV 355
Query: 506 FVNGKLAGSKAGSSGNAKVNVDIPITLVTGKNTIDLLSL 544
FVNG+ +GS G+ + P++L G N + +L
Sbjct: 356 FVNGQYSGSAFGAKEQRSCKFNGPVSLHAGTNKLHFSAL 472
Score = 23.9 bits (50), Expect(2) = 1e-22
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 539 IDLLSLTVGLQNYG 552
I LLS+TVGLQN G
Sbjct: 454 IALLSVTVGLQNVG 495
>AV781248
Length = 488
Score = 94.4 bits (233), Expect = 7e-20
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +2
Query: 36 DGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLHEPVRGQYNFEGRGD 95
DG+ +M G +HY R P+ W D + K+K G++ I+ YV WNLHEP +G+ ++G +
Sbjct: 185 DGEPFRIMGGDLHYFRVHPEYWEDRLLKAKALGLNTIQVYVPWNLHEPTQGKLVWDGVAN 364
Query: 96 LVGFVKAVAAAGLYVHLRIGPYVCAEWNYGGFPLW 130
+ F+ GL V +R GPY+CAEW+ GGFP W
Sbjct: 365 MESFLNLCHKLGLLVMVRPGPYICAEWDGGGFPAW 469
>AU089231
Length = 383
Score = 87.0 bits (214), Expect = 1e-17
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Frame = +1
Query: 697 RAWLKPDSNTFVLFEESGGDPTKISFGTKQIESVCSHVTESHPPPVDTWNSNAESER--- 753
RA+L P N V+ EE G P KI ++VCS + ES PP V++W S+ R
Sbjct: 10 RAYLNPKDNLLVILEEDQGTPEKIEIMNVNRDTVCSIIEESDPPNVNSWVSSHGQFRPXV 189
Query: 754 -KVGPVLSLECPYPNQAISSIKFASFGTPRGTCGNYNHGSCSSNRALSIVQKACIGSSSC 812
V SL C N I +++FASFG P G+CG G C++ IV++ C+G SC
Sbjct: 190 SNVATQASLSCGSGN-XIVAVEFASFGNPSGSCGKLVLGDCNAAATQXIVEQQCLGKGSC 366
Query: 813 NIGVS 817
N+ ++
Sbjct: 367 NVDLN 381
>AV767255
Length = 342
Score = 85.9 bits (211), Expect = 2e-17
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Frame = +3
Query: 469 TADRSDYLWYSLSIVYEDN-----AGDQPVLHIESLGHALHAFVNGKLAGSKAGSSGNAK 523
T D SDYLWY S+ + G+ P L ++S GHA+H +NG+L+GS G+ + +
Sbjct: 3 TRDTSDYLWYITSVDIGSSESFLRGGELPTLIVQSTGHAVHIIINGQLSGSGYGTREDRR 182
Query: 524 VNVDIPITLVTGKNTIDLLSLTVGLQNYGAFYDTVGAGITGPVILKGLKNG 574
P+ L G NTI LLS+ VGL N G ++T GI G + L GL G
Sbjct: 183 FRYTGPVNLRAGTNTIALLSVAVGLPNIGGHFETWNTGILGSIALHGLDKG 335
>AU240090
Length = 300
Score = 82.0 bits (201), Expect = 3e-16
Identities = 45/113 (39%), Positives = 59/113 (51%), Gaps = 1/113 (0%)
Frame = +3
Query: 586 YQVGLQGEFVGLSSGNVGQWNSQSNLPA-NQPLTWYKTNFVAPSGSNPVAIDFTGMGKGE 644
+QVGL+GE G+ + Q S L + ++WYKT F P G PVAI TGMGKG
Sbjct: 3 HQVGLKGEANGIFTEEGSQKVKWSPLAGPGRAISWYKTRFTTPEGRGPVAIRMTGMGKGM 182
Query: 645 AWVNGQSIGRYWPTYISPNSGCTDSCNYRGTYSASKCLKNCGKPSQTLYHVPR 697
WVNG+SIGR+W +++SP G P+Q YH+PR
Sbjct: 183 IWVNGRSIGRHWVSFLSP----------------------LGLPTQAEYHIPR 275
>TC12390
Length = 403
Score = 79.0 bits (193), Expect = 3e-15
Identities = 31/57 (54%), Positives = 44/57 (76%)
Frame = +2
Query: 25 NVTYDHRALVIDGKRRVLMSGSIHYPRSTPQMWPDLIQKSKDGGIDVIETYVFWNLH 81
NVTYD ++L ++G+R +L SGS+HY RSTP MWP ++ + GG++VI+TY FWN H
Sbjct: 233 NVTYDGKSLFVNGRRELLFSGSVHYTRSTPXMWPVILDXATHGGLNVIQTYXFWNAH 403
>TC15316 similar to UP|Q9ZRV9 (Q9ZRV9) Beta-galactosidase (Lactase) ,
partial (8%)
Length = 542
Score = 67.8 bits (164), Expect = 7e-12
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3
Query: 674 GTYSASKCLKNCGKPSQTLYHVPRAWLKPDSNTFVLFEESGGDPTKISFGTKQIESVCSH 733
GT+ KC CG+P+Q YHVPR+WLKP N V+FEE GG+P KIS + + + H
Sbjct: 3 GTFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRMVHTARVH 182
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.317 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,644,102
Number of Sequences: 28460
Number of extensions: 257972
Number of successful extensions: 1215
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of query: 826
length of database: 4,897,600
effective HSP length: 98
effective length of query: 728
effective length of database: 2,108,520
effective search space: 1535002560
effective search space used: 1535002560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC139344.4