BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137839.1 - phase: 0 /pseudo
(271 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC11310 similar to UP|BAD11331 (BAD11331) BRI1-KD interacting pr... 49 7e-07
TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526 At2g01... 47 4e-06
TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%) 44 2e-05
TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like prot... 42 1e-04
TC9596 similar to UP|AAR24722 (AAR24722) At5g49400, partial (66%) 40 4e-04
TC19835 similar to UP|Q9ZRW0 (Q9ZRW0) Nucleolar protein (Fragmen... 40 4e-04
TC12523 38 0.002
TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA... 38 0.002
BP031757 38 0.002
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 37 0.004
TC8198 similar to UP|P93273 (P93273) PAFD103 protein (Fragment),... 36 0.008
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 35 0.010
TC13322 similar to UP|Q9ZS13 (Q9ZS13) RNA helicase (Fragment), p... 35 0.014
TC16303 weakly similar to UP|AGA1_YEAST (P32323) A-agglutinin at... 35 0.014
BG662093 35 0.014
AV777838 34 0.023
TC15357 similar to UP|Q9ZV06 (Q9ZV06) At2g39020 protein, partial... 33 0.039
TC16030 similar to UP|Q9DWH4 (Q9DWH4) Pr4.1, partial (9%) 33 0.067
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 32 0.11
TC12944 32 0.11
>TC11310 similar to UP|BAD11331 (BAD11331) BRI1-KD interacting protein 102
(Fragment), partial (13%)
Length = 667
Score = 49.3 bits (116), Expect = 7e-07
Identities = 45/138 (32%), Positives = 63/138 (45%)
Frame = +1
Query: 122 KKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDEDGER 181
KK K + DE K K E E + + KK KKK + N + S+D+E E+
Sbjct: 19 KKVKVDVVVDEGKVKV-------EVEGEKKEKKKKKKKDQEN-----GEVASSDEEKAEK 162
Query: 182 EKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGGE 241
EKK K HK E S + + + KK KKK + E + SNG E
Sbjct: 163 EKKKK-----------HKVKVEDGSPDLDQSEKKKKKKKDQDAEDNAAEI-----SNGKE 294
Query: 242 EGEQDKKMKKKKKKLSEE 259
+ + +KK KKKK + +EE
Sbjct: 295 DRKSEKKHKKKKNQDAEE 348
Score = 45.8 bits (107), Expect = 8e-06
Identities = 37/115 (32%), Positives = 53/115 (45%)
Frame = +1
Query: 81 ECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNGEQGKKKKKKKKLNDESKHKEYNE 140
E E + + KK KKK+ +E S++ + E+ KKKK K K+ D S
Sbjct: 67 EVEGEKKEKKKKKKKD-------QENGEVASSDEEKAEKEKKKKHKVKVEDGSPDL---- 213
Query: 141 FKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDEDGEREKKMKKKKKKPSEE 195
DQ +K KKK + + + SN ED + EKK KKKK + +EE
Sbjct: 214 ---------DQSEKKKKKKKDQDAEDNAAEI-SNGKEDRKSEKKHKKKKNQDAEE 348
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/104 (29%), Positives = 50/104 (47%)
Frame = +1
Query: 119 QGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDED 178
+G+KK+KKKK + K +E E S++ E ++ KK K K+ ED
Sbjct: 73 EGEKKEKKKK---KKKDQENGEVASSDEEKAEKEKKKKHKV---------------KVED 198
Query: 179 GEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHK 222
G + +KKKK ++ ++ + SN ED + +K KK K
Sbjct: 199 GSPDLDQSEKKKKKKKDQDAEDNAAEISNGKEDRKSEKKHKKKK 330
Score = 38.5 bits (88), Expect = 0.001
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 2 KTPSKKNKRTEDEEGETNGGDPNISESNVTDLPLIKRNDDQHLIK-SNKSEDGEQG-KKK 59
K KK K+ + E GE D +E K +H +K + S D +Q KKK
Sbjct: 82 KKEKKKKKKKDQENGEVASSDEEKAE---------KEKKKKHKVKVEDGSPDLDQSEKKK 234
Query: 60 KKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKR 95
KKKK E N + SN ED KK KKK+
Sbjct: 235 KKKKDQDAEDNAAEI----SNGKEDRKSEKKHKKKK 330
>TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526
At2g01100/F23H14.7 {Arabidopsis thaliana;}, partial
(33%)
Length = 902
Score = 46.6 bits (109), Expect = 4e-06
Identities = 40/205 (19%), Positives = 91/205 (43%), Gaps = 2/205 (0%)
Frame = +3
Query: 58 KKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNG 117
++KKKK + + K+ + E + ++RKL + + ++ D+
Sbjct: 261 EEKKKKIMERKEAPLKWEQ--KLEAAAKAKADAEARERKLKAAKHKKRADSDSESDYDSD 434
Query: 118 EQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDE 177
++ K+ ++ KHK+ + + S+ + ++ K K K E +DF ++ E
Sbjct: 435 DESKRTSRRS----HRKHKKRSHYDSDHEKRKEKLSKRKTKKWSS----ESSDFSGDESE 590
Query: 178 DGERE--KKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDX 235
E ++ +K+KKK ++ + + S+ S+ E + K+ K+H++ + S +D
Sbjct: 591 SRSEEERRRKRKQKKKLRDQVSRSDSSDSDSSADEVSKRKRQHKRHRVTKSSGSDFSSDE 770
Query: 236 RSNGGEEGEQDKKMKKKKKKLSEES 260
++ + K K+ + S ES
Sbjct: 771 ENSPVRKRSHGKHHKRHRHSESSES 845
>TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%)
Length = 1231
Score = 44.3 bits (103), Expect = 2e-05
Identities = 35/113 (30%), Positives = 57/113 (49%), Gaps = 11/113 (9%)
Frame = +3
Query: 122 KKKKKKKLNDESKHKEYNEFKSNEC------EADDQGKKMKKKLIEGNTLMECNDFRSND 175
KKK+++K +E E+ + K +E E D +G+K L+E + + S+D
Sbjct: 441 KKKEEEKPQEEVIVTEFEKVKVSEEPEKKKEEVDHEGEKKHSTLLEKLHRSDSSSSSSSD 620
Query: 176 DEDGEREKKMKKKKKKPSEE--STHKEYS---EFKSNECEDDQGKKTKKKHKL 223
+E+G+ ++ KKKKKK +E ST + S E E+ +G K K KL
Sbjct: 621 EEEGKEGEEKKKKKKKEKKEVKSTDENTSVPVEVDPAHAEEKKGFLDKIKEKL 779
Score = 41.6 bits (96), Expect = 1e-04
Identities = 26/81 (32%), Positives = 47/81 (57%), Gaps = 5/81 (6%)
Frame = +3
Query: 186 KKKKKKPSEESTHKEYSEFKSNECEDDQGKKT----KKKHK-LIEGSTLTECNDXRSNGG 240
KK+++KP EE E+ + K +E + + ++ +KKH L+E ++ + S+
Sbjct: 444 KKEEEKPQEEVIVTEFEKVKVSEEPEKKKEEVDHEGEKKHSTLLEKLHRSDSSSSSSSDE 623
Query: 241 EEGEQDKKMKKKKKKLSEESK 261
EEG++ ++ KKKKKK +E K
Sbjct: 624 EEGKEGEEKKKKKKKEKKEVK 686
Score = 35.8 bits (81), Expect = 0.008
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = +3
Query: 24 NISESNVTDLPLIKRNDDQHLIKSNKSEDGEQGK--KKKKKKKLSEESNHKKYNEFNSNE 81
N ES T++ R L K + E ++ + +K K+SEE KK
Sbjct: 375 NKYESGTTEVETQDRGVFDFLGKKKEEEKPQEEVIVTEFEKVKVSEEPEKKKE------- 533
Query: 82 CEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNGEQGK-KKKKKKKLNDESKHKEYNE 140
E D +G+K K L+E + + S++ + G++G+ KKKKKKK E K + N
Sbjct: 534 -EVDHEGEK--KHSTLLEKLHRSDSSSSSSSDEEEGKEGEEKKKKKKKEKKEVKSTDEN- 701
Query: 141 FKSNECEADDQGKKMKKKLIE 161
S E D + KK ++
Sbjct: 702 -TSVPVEVDPAHAEEKKGFLD 761
Score = 33.1 bits (74), Expect = 0.051
Identities = 28/91 (30%), Positives = 42/91 (45%)
Frame = +3
Query: 3 TPSKKNKRTEDEEGETNGGDPNISESNVTDLPLIKRNDDQHLIKSNKSEDGEQGKKKKKK 62
T +K K +E+ E + D + + T L + R+D S++ E E +KKKKK
Sbjct: 483 TEFEKVKVSEEPEKKKEEVDHEGEKKHSTLLEKLHRSDSSSSSSSDEEEGKEGEEKKKKK 662
Query: 63 KKLSEESNHKKYNEFNSNECEDDDQGKKMKK 93
KK E+ K +E S E D + KK
Sbjct: 663 KK--EKKEVKSTDENTSVPVEVDPAHAEEKK 749
>TC17487 UP|CAE45597 (CAE45597) SAR DNA-binding protein-like protein, complete
Length = 1794
Score = 42.0 bits (97), Expect = 1e-04
Identities = 39/112 (34%), Positives = 55/112 (48%), Gaps = 3/112 (2%)
Frame = +1
Query: 50 SEDGEQGKKKKKKKKLSEESNHKKYNEFNSNECEDDDQ---GKKMKKKRKLIEGNALEEG 106
S D ++ KK+KKKKK E N +K ++E D+++ K+ KKKRK N
Sbjct: 1513 SADKKKEKKEKKKKK---EKNEEKDVPLLADEDGDEEKEVVKKEKKKKRKESTENV---- 1671
Query: 107 NGFRSNEGDNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKK 158
E NG+ +KKKK+K KH E E S E + +GKK K +
Sbjct: 1672 ------ELQNGDDAGEKKKKRK-----KHAEPEE--SAEMPSKKKGKKKKSE 1788
Score = 40.0 bits (92), Expect = 4e-04
Identities = 32/83 (38%), Positives = 44/83 (52%)
Frame = +1
Query: 178 DGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRS 237
D ++EKK KKKKK+ +EE ++ +E ++ K+ KKK K TE N
Sbjct: 1519 DKKKEKKEKKKKKEKNEEKDVPLLADEDGDEEKEVVKKEKKKKRK-----ESTE-NVELQ 1680
Query: 238 NGGEEGEQDKKMKKKKKKLSEES 260
NG + GE KK K+KK EES
Sbjct: 1681 NGDDAGE--KKKKRKKHAEPEES 1743
Score = 40.0 bits (92), Expect = 4e-04
Identities = 43/139 (30%), Positives = 53/139 (37%)
Frame = +1
Query: 121 KKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDEDGE 180
KK+KKKK KE NE K AD+ G DE+ E
Sbjct: 1534 KKEKKKK--------KEKNEEKDVPLLADEDG-----------------------DEEKE 1620
Query: 181 REKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGG 240
KK KKKK+K S E+ + DD G+K KK+ K E
Sbjct: 1621 VVKKEKKKKRKESTENVELQNG--------DDAGEKKKKRKKHAE--------------P 1734
Query: 241 EEGEQDKKMKKKKKKLSEE 259
EE + KK KKK SE+
Sbjct: 1735 EESAEMPSKKKGKKKKSED 1791
Score = 28.5 bits (62), Expect = 1.3
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 185 MKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGGEEGE 244
+ +K +E TH E D+ K+ K+K K E + E D E+G+
Sbjct: 1465 ISQKSDSAMDEDTH---------EPSADKKKEKKEKKKKKEKN---EEKDVPLLADEDGD 1608
Query: 245 QDKKMKKKKKKLSEESKRKE 264
++K++ KK+KK KRKE
Sbjct: 1609 EEKEVVKKEKK----KKRKE 1656
Score = 26.9 bits (58), Expect = 3.7
Identities = 21/63 (33%), Positives = 26/63 (40%)
Frame = +1
Query: 6 KKNKRTEDEEGETNGGDPNISESNVTDLPLIKRNDDQHLIKSNKSEDGEQGKKKKKKKKL 65
KK KR E E N+ N D K+ +H + E E KKK KKK
Sbjct: 1636 KKKKRKESTE--------NVELQNGDDAGEKKKKRKKH---AEPEESAEMPSKKKGKKKK 1782
Query: 66 SEE 68
SE+
Sbjct: 1783 SED 1791
Score = 25.8 bits (55), Expect = 8.2
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Frame = +1
Query: 2 KTPSKKNKRTEDEEGETNGGDPNISESNVTDLPLIK------RNDDQHLIKSNKSEDGEQ 55
K KK K+ + E+ E E + ++K R + ++ +D +
Sbjct: 1522 KKKEKKEKKKKKEKNEEKDVPLLADEDGDEEKEVVKKEKKKKRKESTENVELQNGDDAGE 1701
Query: 56 GKKKKKKKKLSEES 69
KKK+KK EES
Sbjct: 1702 KKKKRKKHAEPEES 1743
>TC9596 similar to UP|AAR24722 (AAR24722) At5g49400, partial (66%)
Length = 1196
Score = 40.0 bits (92), Expect = 4e-04
Identities = 27/97 (27%), Positives = 45/97 (45%)
Frame = +2
Query: 170 DFRSNDDEDGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTL 229
D +ND +D E + K KK K S S+ + + E + G + GS+
Sbjct: 563 DLENNDVDDKEEKAKSSSKKAKRKHRSDSDSGSDSEDSVFETESGSSSVTGSDYSSGSS- 739
Query: 230 TECNDXRSNGGEEGEQDKKMKKKKKKLSEESKRKEYS 266
+D S+ EE E+ ++ KKK +K + + K+YS
Sbjct: 740 ---SDSSSSDSEE-ERRRRRKKKTQKKKKGRRHKKYS 838
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Frame = +2
Query: 115 DNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIE---GNTLMECNDF 171
+N + K++K K + ++K K ++ D G + + E G++ + +D+
Sbjct: 569 ENNDVDDKEEKAKSSSKKAKRKHRSD--------SDSGSDSEDSVFETESGSSSVTGSDY 724
Query: 172 RS-------NDDEDGEREKKMKKKKKKPSEESTHKEY--------SEFKSNECEDDQGKK 216
S + D + ER ++ KKK +K + HK+Y SE S+ DD+ +
Sbjct: 725 SSGSSSDSSSSDSEEERRRRRKKKTQKKKKGRRHKKYSSSSESSDSESASDSDSDDKSSR 904
Query: 217 TKKKH 221
K++H
Sbjct: 905 RKRRH 919
Score = 36.6 bits (83), Expect = 0.005
Identities = 21/109 (19%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Frame = +2
Query: 59 KKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNGE 118
K++K K S + +K+ + + + +D + + + G+ G+ S+ D+ E
Sbjct: 590 KEEKAKSSSKKAKRKHRSDSDSGSDSEDSVFETESGSSSVTGSDYSSGSSSDSSSSDSEE 769
Query: 119 QGKK--KKKKKKLNDESKHKEYNEF-------KSNECEADDQGKKMKKK 158
+ ++ KKK +K +HK+Y+ +++ ++DD+ + K++
Sbjct: 770 ERRRRRKKKTQKKKKGRRHKKYSSSSESSDSESASDSDSDDKSSRRKRR 916
Score = 34.7 bits (78), Expect = 0.018
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Frame = +2
Query: 2 KTPSKKNKR-----------TEDEEGETNGGDPNISESNVTDLPLIKRNDDQHLIKSNKS 50
K+ SKK KR +ED ET G +++ S+ + + D S+ S
Sbjct: 605 KSSSKKAKRKHRSDSDSGSDSEDSVFETESGSSSVTGSDYSS----GSSSDS---SSSDS 763
Query: 51 EDGEQGKKKKKKKKLSEESNHKKYN----EFNSNECEDDDQGKKMKKKRK 96
E+ + ++KKK +K + HKKY+ +S D D K ++++
Sbjct: 764 EEERRRRRKKKTQKKKKGRRHKKYSSSSESSDSESASDSDSDDKSSRRKR 913
>TC19835 similar to UP|Q9ZRW0 (Q9ZRW0) Nucleolar protein (Fragment), partial
(16%)
Length = 550
Score = 40.0 bits (92), Expect = 4e-04
Identities = 34/93 (36%), Positives = 43/93 (45%), Gaps = 21/93 (22%)
Frame = +1
Query: 57 KKKKKKKKLSEESNH---KKYNEFNSNECEDDDQGKKMKK-KRKLIEGNALEEGNGFRSN 112
KK KKK+K ++E + K N + ED KK KK KRKL + A E G ++
Sbjct: 109 KKSKKKQKAADEGDEMAVDKPTVTNGDAVEDHKSEKKKKKEKRKLDQEVAAENGTNGNAS 288
Query: 113 E-----------GDNGE------QGKKKKKKKK 128
E DNGE + KKKKK KK
Sbjct: 289 EPRSVKKKKDRKDDNGEAVEAASESKKKKKSKK 387
Score = 31.6 bits (70), Expect = 0.15
Identities = 33/134 (24%), Positives = 49/134 (35%)
Frame = +1
Query: 121 KKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDEDGE 180
KK KKK+K DE D+ K + G+ + ED +
Sbjct: 109 KKSKKKQKAADEG----------------DEMAVDKPTVTNGDAV-----------EDHK 207
Query: 181 REKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGG 240
EKK KK+K+K +E + + ++E + KK +K D
Sbjct: 208 SEKKKKKEKRKLDQEVAAENGTNGNASEPRSVKKKKDRK--------------DDNGEAV 345
Query: 241 EEGEQDKKMKKKKK 254
E + KK KK KK
Sbjct: 346 EAASESKKKKKSKK 387
Score = 27.7 bits (60), Expect = 2.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +1
Query: 191 KPSEESTHKEYSEFKSNECE-DDQGKKTKKKHKLIEGSTLTECNDXRSNGGEEGEQDKKM 249
K + ES +E ++ E + KK+KKK K + + G+ E K
Sbjct: 34 KSAIESAANNDAEMETEEVPVEASSKKSKKKQKAADEGDEMAVDKPTVTNGDAVEDHKSE 213
Query: 250 KKKKK---KLSEE 259
KKKKK KL +E
Sbjct: 214 KKKKKEKRKLDQE 252
>TC12523
Length = 603
Score = 37.7 bits (86), Expect = 0.002
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Frame = +2
Query: 25 ISESNVTDLPLIKRNDDQHLIKSNKSED------GEQGKKKKKKKKLSEESNHKKYNEFN 78
I NV LI+R L +S KS + E+ KK +K K + N +K N+ N
Sbjct: 194 IVTGNVDAETLIRR-----LTRSGKSVELWPELPAEKKDKKLEKSKGGDTKNKEKENQKN 358
Query: 79 SNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNGEQGKKKKKKKKLNDESKH 135
S D + + ++ G S G GE GKKKKK KK ++ ++
Sbjct: 359 SEPVGDGGSNEDCIDAAGEDSDHCDDDVCGDASGSGGGGEGGKKKKKIKKKKNKGEN 529
Score = 36.6 bits (83), Expect = 0.005
Identities = 27/79 (34%), Positives = 38/79 (47%), Gaps = 5/79 (6%)
Frame = +2
Query: 182 EKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTE---CNDXRSN 238
EKK KK +K ++ +KE K++E D G E S + C D +
Sbjct: 284 EKKDKKLEKSKGGDTKNKEKENQKNSEPVGDGGSNEDCIDAAGEDSDHCDDDVCGDASGS 463
Query: 239 GG--EEGEQDKKMKKKKKK 255
GG E G++ KK+KKKK K
Sbjct: 464 GGGGEGGKKKKKIKKKKNK 520
>TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA helicase,
partial (5%)
Length = 565
Score = 37.7 bits (86), Expect = 0.002
Identities = 27/90 (30%), Positives = 44/90 (48%)
Frame = +3
Query: 118 EQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDE 177
E KKKK+KK +D+ + ++ +NE A+++ +++ GN N D
Sbjct: 165 ENNKKKKEKKNKHDKKRPRDV----ANEEHAEEEEEQI------GN----------NSDR 284
Query: 178 DGEREKKMKKKKKKPSEESTHKEYSEFKSN 207
DGE KK KKKK K E ++ + + N
Sbjct: 285 DGESSKKKKKKKHKVEVEERKEKNNSWVWN 374
Score = 34.7 bits (78), Expect = 0.018
Identities = 22/66 (33%), Positives = 35/66 (52%), Gaps = 2/66 (3%)
Frame = +3
Query: 76 EFNSNECEDDDQGKKMKKKRKLI--EGNALEEGNGFRSNEGDNGEQGKKKKKKKKLNDES 133
E +N+ + + + K KK+ + + E +A EE +N +GE KKKKKKK +
Sbjct: 159 ETENNKKKKEKKNKHDKKRPRDVANEEHAEEEEEQIGNNSDRDGESSKKKKKKKHKVEVE 338
Query: 134 KHKEYN 139
+ KE N
Sbjct: 339 ERKEKN 356
Score = 32.7 bits (73), Expect = 0.067
Identities = 23/96 (23%), Positives = 41/96 (41%)
Frame = +3
Query: 169 NDFRSNDDEDGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGST 228
++ +S+ + E KK K+KK K ++ +E + E E+ G
Sbjct: 132 DNLQSSPMVETENNKKKKEKKNKHDKKRPRDVANEEHAEEEEEQIG-------------- 269
Query: 229 LTECNDXRSNGGEEGEQDKKMKKKKKKLSEESKRKE 264
+N +GE KK KKKK K+ E ++++
Sbjct: 270 --------NNSDRDGESSKKKKKKKHKVEVEERKEK 353
Score = 32.7 bits (73), Expect = 0.067
Identities = 15/36 (41%), Positives = 20/36 (54%)
Frame = +3
Query: 40 DDQHLIKSNKSEDGEQGKKKKKKKKLSEESNHKKYN 75
+++ I +N DGE KKKKKKK E K+ N
Sbjct: 249 EEEEQIGNNSDRDGESSKKKKKKKHKVEVEERKEKN 356
>BP031757
Length = 507
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 153 KKMKKKLIEGNTLMECNDFRSNDDEDGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDD 212
K+ + KL+E E N+ + +D + E EKK KKK +K EE +E E +S + +D
Sbjct: 140 KRKRMKLLE-----EDNEDKDGEDYEEEEEKKKKKKSRKKKEEEEEEEQEEPESPQPPED 304
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +2
Query: 67 EESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNGEQGKKKKKK 126
E+ ++++ + +++ E+++ + K RK LEE N + E E+ KKKKKK
Sbjct: 53 EKMVNRRFTQVATSDDEEEETPPQQLKPRKRKRMKLLEEDNEDKDGEDYEEEEEKKKKKK 232
Query: 127 KKLNDESKHKEYNE 140
+ E + +E E
Sbjct: 233 SRKKKEEEEEEEQE 274
Score = 32.3 bits (72), Expect = 0.088
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 188 KKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKH-KLIEGSTLTECNDXRSNGGEEGEQD 246
K+K + T S+ + E Q K K+K KL+E D GE+ E++
Sbjct: 50 KEKMVNRRFTQVATSDDEEEETPPQQLKPRKRKRMKLLE-------EDNEDKDGEDYEEE 208
Query: 247 KKMKKKKKKLSEESKRKEYSKFE 269
++ KKKKK ++ + +E + E
Sbjct: 209 EEKKKKKKSRKKKEEEEEEEQEE 277
Score = 29.6 bits (65), Expect = 0.57
Identities = 24/87 (27%), Positives = 36/87 (40%), Gaps = 6/87 (6%)
Frame = +2
Query: 5 SKKNKRTEDEEGETNGGDPNISESNVTDLPLIKRNDDQHLIKSNKSEDG------EQGKK 58
S K K + D E+ L KR + L + N+ +DG E+ KK
Sbjct: 44 SGKEKMVNRRFTQVATSDDEEEETPPQQLKPRKRKRMKLLEEDNEDKDGEDYEEEEEKKK 223
Query: 59 KKKKKKLSEESNHKKYNEFNSNECEDD 85
KKK +K EE ++ E S + +D
Sbjct: 224 KKKSRKKKEEEEEEEQEEPESPQPPED 304
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 37.0 bits (84), Expect = 0.004
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Frame = +2
Query: 59 KKKKKKLSE--------ESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFR 110
KKK KK S+ E +N FN + +DD I+ +A+EE
Sbjct: 518 KKKPKKGSKNTKPITKTEKCESFFNFFNPPQVPEDDDD---------IDDDAVEELQNLM 670
Query: 111 SNEGDNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECND 170
++ D G + K ++ + E ++F+ E E D+ G + + + + + E +D
Sbjct: 671 EHDYDIGSTIRDKIIPHAVSWFTGEAEQSDFEDIE-EDDEDGDEDEDEDDDDDEEEEDDD 847
Query: 171 FRSNDDEDGEREKKMKK-KKKKPSEESTHKEYSEFKSNEC 209
DDE+GE + K K K +P ++ + E K C
Sbjct: 848 DDDEDDEEGEGKSKSKSGSKARPGKDQPTERPPECKQQ*C 967
>TC8198 similar to UP|P93273 (P93273) PAFD103 protein (Fragment), partial
(65%)
Length = 850
Score = 35.8 bits (81), Expect = 0.008
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 7/180 (3%)
Frame = +3
Query: 49 KSEDGEQGKKKKKKKKLSE-ESNHKKYNEF--NSNECEDDDQGKKMKKKRKLIEGNALEE 105
K + + K++KKK+L+E E+ + S + +D+ QG KK +G +
Sbjct: 51 KETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGAPQDKKGDEADG----D 218
Query: 106 GNGFRSNEGDNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTL 165
G + + KKKKKK K + E K E+ DQ G L
Sbjct: 219 GEKKETTAAGGSKNAKKKKKKDKASKEVK------------ESQDQPNSSDTN--NGPDL 356
Query: 166 MECNDFRSNDDEDGEREKKM----KKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKH 221
E + ++ + ER KK+ KKK K + + E + + KK +K H
Sbjct: 357 AENPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAKAAAQEAAARHAKLAAAKKKEKNH 536
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 35.4 bits (80), Expect = 0.010
Identities = 36/165 (21%), Positives = 66/165 (39%), Gaps = 1/165 (0%)
Frame = -2
Query: 59 KKKKKKLSEESNHKKYNEF-NSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDNG 117
K + K SE+ H E N +E ++DD G + + E + E+G G+ +N +
Sbjct: 665 KGETKSQSEDKQHDAEGEDGNDDEGDEDDDGDGPFGEGE--EDLSSEDGAGYGNNSNN-- 498
Query: 118 EQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDE 177
K KK + ++ E E D+ G+ + +DD+
Sbjct: 497 -----KSNSKKAPEGGPGAGAGPEENGEDEEDEDGEDQE-----------------DDDD 384
Query: 178 DGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHK 222
D E + + + EE +E +E + + ED++ + KK K
Sbjct: 383 DDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEALQPPKKRK 249
Score = 26.9 bits (58), Expect = 3.7
Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 11/138 (7%)
Frame = -2
Query: 2 KTPSKKNKRTEDEEGETNGGDPNISESNVTDLPLIKRNDD-----------QHLIKSNKS 50
+T S+ + D EGE +G D E + D P + +D KSN
Sbjct: 659 ETKSQSEDKQHDAEGE-DGNDDEGDEDDDGDGPFGEGEEDLSSEDGAGYGNNSNNKSNSK 483
Query: 51 EDGEQGKKKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFR 110
+ E G + + E + E ++ +DD+ + + E +EE +
Sbjct: 482 KAPEGGPGAGAGPEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNED 303
Query: 111 SNEGDNGEQGKKKKKKKK 128
E + E+ + KK+K
Sbjct: 302 EEEDEEDEEALQPPKKRK 249
>TC13322 similar to UP|Q9ZS13 (Q9ZS13) RNA helicase (Fragment), partial (7%)
Length = 528
Score = 35.0 bits (79), Expect = 0.014
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = +3
Query: 55 QGKKKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEG 114
Q +KKKKKK + N G+K KRKL E +
Sbjct: 126 QSEKKKKKKNKDKHQN-----------------GEKTSPKRKLEE------------LDN 218
Query: 115 DNGEQGKKKKKKKKLNDESKHKEYNE 140
NG + +KKKKKKK ++K +E E
Sbjct: 219 QNGTESEKKKKKKKEKHDNKSEENAE 296
Score = 30.0 bits (66), Expect = 0.44
Identities = 22/76 (28%), Positives = 34/76 (43%)
Frame = +3
Query: 192 PSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGGEEGEQDKKMKK 251
P+ E + K N+ + G+KT K KL E + G E E+ KK KK
Sbjct: 108 PNSPELQSEKKKKKKNKDKHQNGEKTSPKRKLEE---------LDNQNGTESEKKKK-KK 257
Query: 252 KKKKLSEESKRKEYSK 267
K+K ++ + E +K
Sbjct: 258 KEKHDNKSEENAEETK 305
Score = 28.1 bits (61), Expect = 1.7
Identities = 24/95 (25%), Positives = 36/95 (37%)
Frame = +3
Query: 118 EQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFRSNDDE 177
E +KKKKKK D+ ++ E K E D+Q +
Sbjct: 120 ELQSEKKKKKKNKDKHQNGEKTSPKRKLEELDNQ-----------------------NGT 230
Query: 178 DGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDD 212
+ E++KK KK+K E +E E N D+
Sbjct: 231 ESEKKKKKKKEKHDNKSEENAEETKEANGNGNADE 335
Score = 28.1 bits (61), Expect = 1.7
Identities = 27/93 (29%), Positives = 43/93 (46%)
Frame = +3
Query: 111 SNEGDNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECND 170
++E N + + +KKKKK N K K N K++ K+KL E
Sbjct: 96 ADEAPNSPELQSEKKKKKKN---KDKHQNGEKTSP----------KRKLEE--------- 209
Query: 171 FRSNDDEDGEREKKMKKKKKKPSEESTHKEYSE 203
D+++G +K KKKKKK ++ +E +E
Sbjct: 210 ---LDNQNGTESEK-KKKKKKEKHDNKSEENAE 296
Score = 27.3 bits (59), Expect = 2.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +3
Query: 181 REKKMKKKKKKPSEESTHKEYSEFKSNECEDDQG-----KKTKKKHK 222
+ +K KKKK K ++ K + K E ++ G KK KKK K
Sbjct: 126 QSEKKKKKKNKDKHQNGEKTSPKRKLEELDNQNGTESEKKKKKKKEK 266
>TC16303 weakly similar to UP|AGA1_YEAST (P32323) A-agglutinin attachment
subunit precursor, partial (3%)
Length = 1235
Score = 35.0 bits (79), Expect = 0.014
Identities = 54/217 (24%), Positives = 85/217 (38%), Gaps = 30/217 (13%)
Frame = +1
Query: 5 SKKNKRTEDEEGETNGGDPNIS---ESNVTDLPLIKRNDDQHLIKSNKSEDGEQGKKKKK 61
SK KR + G GG +++ E V + R+D+ K K +DG GKK+K+
Sbjct: 292 SKPRKRLIKKGG--GGGSQSVAPDLEDEVEEEDFPVRSDEGEGRKRKKEKDGGSGKKEKR 465
Query: 62 KKK----LSEESNHKKYNEFNS------NECEDDDQGKKMKKKRKLIEGNALEEGNGFRS 111
K S S K ++F S + D G+ + + G++ ++ G R+
Sbjct: 466 LKGDTRFGSSSSGGKGGSKFGSAKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDQEGVRN 645
Query: 112 NEGDN--GEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQ-------GKKMKKK---- 158
+ DN + G + N+ S E + + E E DD+ GKK KK
Sbjct: 646 LDDDNFIDDTGVEPGFYGNYNEPSSPGEAPQ--AEEGEEDDEINDLFKMGKKKKKNERSP 819
Query: 159 ----LIEGNTLMECNDFRSNDDEDGEREKKMKKKKKK 191
L+ N + E D E + K K KK
Sbjct: 820 AEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKK 930
>BG662093
Length = 387
Score = 35.0 bits (79), Expect = 0.014
Identities = 21/94 (22%), Positives = 46/94 (48%)
Frame = +3
Query: 38 RNDDQHLIKSNKSEDGEQGKKKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKL 97
+N+ + KS +G++ KKK KK ++ +H ++ +DD G ++K K
Sbjct: 105 KNNPVKMAIIRKSVEGKEHKKKDPSKKEKQKKHHSSKSKHKKPSDSEDDTGD--RRKGKT 278
Query: 98 IEGNALEEGNGFRSNEGDNGEQGKKKKKKKKLND 131
E + ++ + +S+ +G++K++K D
Sbjct: 279 GERDFDKKYHKTQSDSEYESSEGERKRRKNHYED 380
>AV777838
Length = 565
Score = 34.3 bits (77), Expect = 0.023
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -1
Query: 57 KKKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLIEGNALEEGNGFRSNEGDN 116
KKKKKKKK ++ KK E C G++ + RKL A + +G GD+
Sbjct: 271 KKKKKKKKKKKKKKKKKKKEAQ*WWC-----GQRRARVRKLAVVVAWPKSSG-----GDH 122
Query: 117 GEQGKKKKKKKKLNDESKHKEYNEFKSN 144
E+ + +K +K + K ++ + N
Sbjct: 121 EEEDEVRKMEKNGEESEKGRDVERLREN 38
Score = 26.6 bits (57), Expect = 4.8
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 181 REKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLTECNDXRSNGG 240
++KK KKKKKK ++ KE + G++ + KL +S+GG
Sbjct: 271 KKKKKKKKKKKKKKKKKKKEAQ*WWC-------GQRRARVRKLAVVVAWP-----KSSGG 128
Query: 241 EEGEQDKKMKKKKKKLSEESKR 262
+ E+D+ +K +K EES++
Sbjct: 127 DHEEEDE--VRKMEKNGEESEK 68
Score = 26.2 bits (56), Expect = 6.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 247 KKMKKKKKKLSEESKRKE 264
KK KKKKKK ++ K+KE
Sbjct: 265 KKKKKKKKKKKKKKKKKE 212
>TC15357 similar to UP|Q9ZV06 (Q9ZV06) At2g39020 protein, partial (69%)
Length = 1578
Score = 33.5 bits (75), Expect = 0.039
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Frame = +2
Query: 115 DNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKK---LIEGNTLMECNDF 171
D G +K K ES E ++ E + KK KKK EG+ +
Sbjct: 77 DKGVAPRKNIDVMKSAIESAANNDAEMETEEVPVEASSKKSKKKQKAADEGDEMAVDKPT 256
Query: 172 RSNDDEDGEREKKMKKKKKKPSEESTHKEYSEFKSNECEDDQGKKTKKKHKLIEGSTLT 230
+N D + + + KKKKKK E + KS +T +I G+ T
Sbjct: 257 VTNGDAVEDHKSEKKKKKKKKKRGGGKSEKTLIKSTHGRRSTATRTNSGSHIIAGNRHT 433
Score = 30.4 bits (67), Expect = 0.33
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 57 KKKKKKKKLSEESNHKKYNE---FNSNECEDDDQGKKMKKKRKLIEGNALEE 105
KK KKK+K ++E + ++ N + ED KK KKK+K G E+
Sbjct: 191 KKSKKKQKAADEGDEMAVDKPTVTNGDAVEDHKSEKKKKKKKKKRGGGKSEK 346
Score = 29.6 bits (65), Expect = 0.57
Identities = 23/83 (27%), Positives = 36/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 191 KPSEESTHKEYSEFKSNECE-DDQGKKTKKKHKLI-EGSTLTECNDXRSNGGEEGEQDKK 248
K + ES +E ++ E + KK+KKK K EG + +NG + +
Sbjct: 116 KSAIESAANNDAEMETEEVPVEASSKKSKKKQKAADEGDEMAVDKPTVTNGDAVEDHKSE 295
Query: 249 MKKKKKKLSEESKRKEYSKFELT 271
KKKKKK + E + + T
Sbjct: 296 KKKKKKKKKRGGGKSEKTLIKST 364
Score = 29.3 bits (64), Expect = 0.74
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 51 EDGEQGKKKKKKKKLSEESNHKKYNEFNSNECEDDDQGKKMKKKRKLI-EGNALEEGNGF 109
+ G +K K + ES E + E + KK KKK+K EG+ +
Sbjct: 77 DKGVAPRKNIDVMKSAIESAANNDAEMETEEVPVEASSKKSKKKQKAADEGDEMAVDKPT 256
Query: 110 RSN----EGDNGEQGKKKKKKKKLNDESK 134
+N E E+ KKKKKKK+ +S+
Sbjct: 257 VTNGDAVEDHKSEKKKKKKKKKRGGGKSE 343
>TC16030 similar to UP|Q9DWH4 (Q9DWH4) Pr4.1, partial (9%)
Length = 631
Score = 32.7 bits (73), Expect = 0.067
Identities = 26/107 (24%), Positives = 45/107 (41%), Gaps = 6/107 (5%)
Frame = +2
Query: 113 EGDNGEQGKKKKKKKKLNDESKHKEYNEFKSNECEADDQGKKMKKKLIEGNTLMECNDFR 172
EG + K K + ESK K+ ++ EA + K EGN +
Sbjct: 77 EGYERSAKNGESKDKDVGGESKDKDGAGESKDKDEAGESDTKALSLESEGNLGADERPAA 256
Query: 173 SNDDEDGEREKKMKKKKKKPSEESTHKEYSEFK------SNECEDDQ 213
D+E GEREK+ + +P E+ + + K S++ E+++
Sbjct: 257 VVDEEKGEREKRKGNEDDEPREDLPQPKKARVKLSHLPSSDDAEEEE 397
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +3
Query: 203 EFKSNECEDDQGKKTKKKHKLIEGSTLTECN--------DXRSNGGEEGEQDKKMKKKKK 254
+ + N E+ Q T+K+ ++ + +T + N D N + ++ KK+KKKKK
Sbjct: 15 KLRENSQENSQENPTRKESRINKNNTR*KSNLSGICRTLDFNFNQLLQEKKKKKLKKKKK 194
Query: 255 KLSEESKRKE 264
K ++ K+K+
Sbjct: 195 KKKKKKKKKK 224
Score = 30.8 bits (68), Expect = 0.26
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +3
Query: 50 SEDGEQGKKKKKKKKLSEESNHKKYN--------EFNSNECEDDDQGKKMKKKRKLIEGN 101
S++ Q +K+ ++++ + K N +FN N+ + + KK+KKK+K
Sbjct: 30 SQENSQENPTRKESRINKNNTR*KSNLSGICRTLDFNFNQLLQEKKKKKLKKKKK----- 194
Query: 102 ALEEGNGFRSNEGDNGEQGKKKKKKKK 128
++ KKKKKKKK
Sbjct: 195 ----------------KKKKKKKKKKK 227
Score = 27.7 bits (60), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 170 DFRSNDDEDGEREKKMKKKKKKPSEESTHKEYSEFK 205
DF N +++KK+KKKKKK ++ K+ + K
Sbjct: 132 DFNFNQLLQEKKKKKLKKKKKKKKKKKKKKKKKQRK 239
Score = 26.2 bits (56), Expect = 6.3
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +3
Query: 6 KKNKRTEDEEGETNGGDPNISESNV---TDLPLIKRNDD---QHLIKSNKSEDGEQGKKK 59
++N + +E T + I+++N ++L I R D L++ K + ++ KKK
Sbjct: 21 RENSQENSQENPTRK-ESRINKNNTR*KSNLSGICRTLDFNFNQLLQEKKKKKLKKKKKK 197
Query: 60 KKKKKLSEESNHKK 73
KKKKK ++ +K
Sbjct: 198KKKKKKKKKKKQRK 239
>TC12944
Length = 547
Score = 32.0 bits (71), Expect = 0.11
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Frame = -3
Query: 29 NVTDLPLIKRNDDQ-HLIKSNKSEDGEQGKKKK--KKKKLSEESNHKKYNEFNSNECED- 84
N+TD L R+ + HL+ + GE+G+KKK K+++++ + + N+ + + C +
Sbjct: 458 NLTDKYLRNRDT*R*HLLGARARSCGEEGEKKKIRKRRRIT*KKHENNLNQQHFHRCAEE 279
Query: 85 ---DDQ-----GKKMKKKRKLIEGNALEEGNGFRSNEGDNGEQGKKKKKKKKLNDESKH 135
DD+ GK +K K G ++G G N E+ K ++ E+++
Sbjct: 278 GA*DDEEAPTAGKSTEKSAKSRVGVEEKKGEEEEETRG*NLERVNGKM*YEECEKEARY 102
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.297 0.122 0.323
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,540,252
Number of Sequences: 28460
Number of extensions: 46220
Number of successful extensions: 1188
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of query: 271
length of database: 4,897,600
effective HSP length: 89
effective length of query: 182
effective length of database: 2,364,660
effective search space: 430368120
effective search space used: 430368120
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC137839.1