BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136503.4 + phase: 0 /partial
(566 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP034485 176 7e-45
TC9649 similar to UP|Q95TP4 (Q95TP4) LD33277p, partial (4%) 107 4e-24
BI419973 85 4e-17
TC12523 84 6e-17
TC19711 72 3e-13
TC16731 similar to UP|Q84KJ2 (Q84KJ2) Copper chaperone, partial ... 63 1e-10
TC11547 similar to UP|Q9SE03 (Q9SE03) Copper chaperone homolog C... 61 4e-10
TC13685 similar to UP|Q9FJH5 (Q9FJH5) Gb|AAC98457.1 (At5g60800),... 60 9e-10
CB828502 60 1e-09
BI418928 59 2e-09
AV408212 57 1e-08
TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protei... 55 3e-08
TC16918 weakly similar to UP|Q9FJH5 (Q9FJH5) Gb|AAC98457.1 (At5g... 54 5e-08
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc... 53 1e-07
AV422734 53 2e-07
BP052316 50 1e-06
AW720417 49 3e-06
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 47 6e-06
TC9612 similar to PIR|T06397|T06397 isoprenylated protein FP6 - ... 46 1e-05
TC13114 46 2e-05
>BP034485
Length = 485
Score = 176 bits (447), Expect = 7e-45
Identities = 99/171 (57%), Positives = 112/171 (64%), Gaps = 6/171 (3%)
Frame = +3
Query: 272 DGGKKNKGEKQKGGGGDWGDEKNSSKKKNGKGKNGGGGFLVKFLGLGKKSKKGGGAA--D 329
DGG K+K KQKGGGG + +S KKK K KNGGG FLVKFLGLGKKSKKGGG +
Sbjct: 3 DGGNKSKEGKQKGGGGG---DSSSDKKKKTKDKNGGG-FLVKFLGLGKKSKKGGGGGGGE 170
Query: 330 TTNKKKNNGGGGNSNNSKGKDGKKGE----KLDKVEFDFQDFDITPHGKSGKGGNGNGNG 385
T NK KN N+KGK+GKKG KLDK++FDFQDFDI HGKSG G G G G
Sbjct: 171 TANKNKNKNKNNGGGNNKGKEGKKGGGGGGKLDKIDFDFQDFDIPSHGKSG-GKGGGGGG 347
Query: 386 KGAPAKGNANNGHGSNNNGNGGHMGPMGQMGAMNQMAAMNRMGPMGQMGSM 436
KG + +G G N NGNGGHM PM Q+G+M Q MGPMGQM +M
Sbjct: 348 KGNKNGHDHGHGIGGNMNGNGGHMDPMSQLGSMGQ------MGPMGQMRNM 482
Score = 39.3 bits (90), Expect = 0.002
Identities = 52/192 (27%), Positives = 68/192 (35%), Gaps = 10/192 (5%)
Frame = +3
Query: 33 DAEQGKVLVTGDVDPAKLLKKLKSSGKHAELWGGQKAMMINQNQNFQQQQPQFKNMQIDN 92
D+ K T D + L K GK ++ GG + N KN +
Sbjct: 54 DSSSDKKKKTKDKNGGGFLVKFLGLGKKSKKGGGGGG---GETAN--------KNKNKNK 200
Query: 93 NKGGKNNKPQNQKGQKGGVQVAQFQNPKGGKDMKVPNKSQKHVNFDLSEEEFDESDADFD 152
N GG NNK ++G+KGG GGK D+ D DF
Sbjct: 201 NNGGGNNK--GKEGKKGG--------GGGGK--------------------LDKIDFDFQ 290
Query: 153 DYD--------DEDDFDEDEEEEFGHGHGHGQGPQGNGFGQH--PMHNNKMMMAMMQNQN 202
D+D + + + GH HGHG G NG G H PM +Q
Sbjct: 291 DFDIPSHGKSGGKGGGGGGKGNKNGHDHGHGIGGNMNGNGGHMDPM-----------SQL 437
Query: 203 GRGPQLGPGGGM 214
G Q+GP G M
Sbjct: 438 GSMGQMGPMGQM 473
>TC9649 similar to UP|Q95TP4 (Q95TP4) LD33277p, partial (4%)
Length = 754
Score = 107 bits (268), Expect = 4e-24
Identities = 67/142 (47%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Frame = +2
Query: 428 GPMGQMGSMDQMRSMPAVQGLPAGAAAAAMNGGYYQG---MQQMQPNPYHQQQQQHQQQQ 484
GPM + Q ++ AVQGLPA AA GGY+QG M NPY QQ QQ QQQ
Sbjct: 2 GPMSMAMNHPQTGNIQAVQGLPA---AAVNGGGYFQGGAGPDVMPGNPYQQQLQQQQQQM 172
Query: 485 QQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYPQHMMYGGGRPHPSMNYMGPPPMP 544
QQQQYMA MM Q Q+ G Q MMY RP P++NYM PPP
Sbjct: 173 QQQQYMAAMMNQ----------QRAMAAGGGGGGGIQQPMMY--ARPPPAVNYMYPPPY- 313
Query: 545 SHPMADPITHVFSDENTESCSI 566
++P DP TH FSDENT SC++
Sbjct: 314 TYPPQDPYTHFFSDENTSSCNV 379
>BI419973
Length = 551
Score = 84.7 bits (208), Expect = 4e-17
Identities = 48/86 (55%), Positives = 59/86 (67%)
Frame = +2
Query: 236 KKGDIMDLPMQMHMKGKSGNYGEVKNGNGGGKKGGDDGGKKNKGEKQKGGGGDWGDEKNS 295
KKG+++DLP++M KGK GN+ + GKKG DGG K+K KQKGGG G + +S
Sbjct: 2 KKGEVIDLPVKM--KGKGGNF------SNEGKKGNGDGGNKSKEGKQKGGG---GGDSSS 148
Query: 296 SKKKNGKGKNGGGGFLVKFLGLGKKS 321
KKK K KN GGGFLVKFLGLG+ S
Sbjct: 149 DKKKKTKDKN-GGGFLVKFLGLGRSS 223
>TC12523
Length = 603
Score = 84.0 bits (206), Expect = 6e-17
Identities = 44/108 (40%), Positives = 66/108 (60%), Gaps = 2/108 (1%)
Frame = +2
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAE 62
+LKV IHC+GC ++VKK+LQ I+GVY+ ID Q KV+VTG+VD L+++L SGK E
Sbjct: 83 VLKVLIHCDGCTKRVKKILQGIDGVYTTEIDPRQHKVIVTGNVDAETLIRRLTRSGKSVE 262
Query: 63 LWGGQKAMMINQNQNFQQQQPQFKNMQIDNNKGG--KNNKPQNQKGQK 108
LW + + K+ +++ +KGG KN + +NQK +
Sbjct: 263 LW--------------PELPAEKKDKKLEKSKGGDTKNKEKENQKNSE 364
Score = 34.7 bits (78), Expect = 0.042
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 284 GGGGDWGDEKNSSKKKNGKGKNGG 307
GGGG+ G +K KKK KG+NGG
Sbjct: 464 GGGGEGGKKKKKIKKKKNKGENGG 535
Score = 32.3 bits (72), Expect = 0.21
Identities = 30/97 (30%), Positives = 35/97 (35%), Gaps = 14/97 (14%)
Frame = +2
Query: 268 KGGDDGGKKNKGEKQKGGGGDWG-----------DEKNSSKKKNGKGKNGGGGFLVKFLG 316
KGGD K+ + +K GD G D + G GGG G
Sbjct: 314 KGGDTKNKEKENQKNSEPVGDGGSNEDCIDAAGEDSDHCDDDVCGDASGSGGG------G 475
Query: 317 LGKKSKKGGGAADTTNKKKNNGGGGNS---NNSKGKD 350
G K KK KKKN G G S NN GK+
Sbjct: 476 EGGKKKK------KIKKKKNKGENGGSAPPNNGGGKE 568
Score = 28.5 bits (62), Expect = 3.0
Identities = 18/44 (40%), Positives = 25/44 (55%)
Frame = +2
Query: 261 NGNGGGKKGGDDGGKKNKGEKQKGGGGDWGDEKNSSKKKNGKGK 304
+G+GGG G+ G KK K +K+K G + G S+ NG GK
Sbjct: 455 SGSGGG---GEGGKKKKKIKKKKNKGENGG----SAPPNNGGGK 565
>TC19711
Length = 579
Score = 71.6 bits (174), Expect = 3e-13
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +3
Query: 6 VNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAELW 64
V + C+GCE KVKK L + GV SV I+ +Q KV VTG V+P K+LKK KS+GK AE+W
Sbjct: 3 VRMDCDGCELKVKKTLSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKRAEIW 179
Score = 27.3 bits (59), Expect = 6.8
Identities = 10/17 (58%), Positives = 14/17 (81%)
Frame = +3
Query: 550 DPITHVFSDENTESCSI 566
DP +++FSDEN +CSI
Sbjct: 306 DPYSNMFSDENPNACSI 356
>TC16731 similar to UP|Q84KJ2 (Q84KJ2) Copper chaperone, partial (83%)
Length = 517
Score = 62.8 bits (151), Expect = 1e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +3
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAE 62
+LKV + CEGC VK++L K+EGV S +ID ++ KV+V G+V P +L+ + +GK
Sbjct: 75 VLKVGMSCEGCVGAVKRVLGKLEGVESYDIDLKEQKVVVKGNVQPDTVLQTVSKTGKKTA 254
Query: 63 LWGGQKA 69
WG + A
Sbjct: 255 FWGNEVA 275
>TC11547 similar to UP|Q9SE03 (Q9SE03) Copper chaperone homolog CCH, partial
(71%)
Length = 528
Score = 61.2 bits (147), Expect = 4e-10
Identities = 35/112 (31%), Positives = 56/112 (49%)
Frame = +1
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAE 62
+LKV + C+GC V ++L+K+EGV S NID ++ KV V G+V P +L+ + SGK
Sbjct: 40 VLKVRMSCQGCAGAVNRVLEKMEGVESFNIDLKEQKVTVKGNVKPEDVLETVSKSGKKTA 219
Query: 63 LWGGQKAMMINQNQNFQQQQPQFKNMQIDNNKGGKNNKPQNQKGQKGGVQVA 114
W +A Q Q+Q + ++N ++ K V+ A
Sbjct: 220 FW-EDEAPAATQAAETQKQPSETATPDLENKPSETAAVVSDEPENKPAVETA 372
>TC13685 similar to UP|Q9FJH5 (Q9FJH5) Gb|AAC98457.1 (At5g60800), partial
(37%)
Length = 585
Score = 60.1 bits (144), Expect = 9e-10
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAE 62
+LKV++HCEGC K+ K L+ +GV +V ++ GKV V+G VDP KL L K
Sbjct: 191 VLKVDMHCEGCASKIVKNLRAFKGVETVKAESNTGKVTVSGKVDPTKLRDSLAEKIK--- 361
Query: 63 LWGGQKAMMINQNQNFQQQQPQFKNMQID-NNKGGKNNKPQNQKGQKGGVQVAQFQNP 119
+K +++ ++++ + K+ + NNK K + + K V A + P
Sbjct: 362 ----KKVELVSPQPKKEKEKAENKDKDTETNNKAEKKTEEKKINKDKQAVTTAVLKVP 523
Score = 30.4 bits (67), Expect = 0.80
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGV 27
+LKV +HC+GC ++ K + K +GV
Sbjct: 509 VLKVPLHCQGCIDRIGKFVLKTKGV 583
>CB828502
Length = 536
Score = 59.7 bits (143), Expect = 1e-09
Identities = 27/62 (43%), Positives = 46/62 (73%), Gaps = 1/62 (1%)
Frame = +3
Query: 4 LKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKL-KSSGKHAE 62
+KV + C+GCE+KV+K ++ ++GV SV+I+ + KV VTG V+P K++ ++ +GK AE
Sbjct: 126 VKVKMDCDGCERKVRKAVEGMKGVNSVDIERKASKVTVTGYVEPNKVVSRIAHHTGKKAE 305
Query: 63 LW 64
+W
Sbjct: 306 IW 311
>BI418928
Length = 496
Score = 58.9 bits (141), Expect = 2e-09
Identities = 32/107 (29%), Positives = 55/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKL-KSSGKHA 61
+LK+++HCEGC +K+K+ L+ GV V D K+ V G VDP K+ KL + + K+
Sbjct: 57 VLKLDLHCEGCVKKIKRALRNFNGVEDVKADLSGNKLTVIGKVDPTKVRDKLAEKTNKNV 236
Query: 62 ELWGGQKAMMINQNQNFQQQQPQFKNMQIDNNKGGKNNKPQNQKGQK 108
EL ++ +++P+ K D + KP +K ++
Sbjct: 237 ELVSSPPKKDAAGDKPPPEKKPEEKPKTDDKKPEEEKTKPDEKKAEE 377
Score = 37.7 bits (86), Expect = 0.005
Identities = 13/29 (44%), Positives = 23/29 (78%)
Frame = +3
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVN 31
++K+ +HC+GC K++K++ K +GV SVN
Sbjct: 408 VMKIRLHCDGCIHKIEKIVLKAKGVESVN 494
>AV408212
Length = 362
Score = 56.6 bits (135), Expect = 1e-08
Identities = 33/69 (47%), Positives = 38/69 (54%), Gaps = 3/69 (4%)
Frame = +3
Query: 467 QMQPNPYHQQQQQHQQQQQQ---QQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYPQH 523
Q Q +P+ QQQQQ Q QQ Q++ A+ QQQQQQQ QQQ QQQQ QQ PQ
Sbjct: 3 QPQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQ-----QQPQS 167
Query: 524 MMYGGGRPH 532
R H
Sbjct: 168 QQQSRDRAH 194
Score = 44.7 bits (104), Expect = 4e-05
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +3
Query: 465 MQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNN 518
MQQ+ + QQQ QQQQQQQQ QQQQ QQ Q Q QQQ + ++ N
Sbjct: 54 MQQILLQRHAALQQQQQQQQQQQQ----QQQQQQSQQQQPQSQQQSRDRAHLLN 203
Score = 44.3 bits (103), Expect = 5e-05
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +3
Query: 476 QQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNM 519
QQQQ QQQQQQQQ QQQQ Q QQ + + G+ N +
Sbjct: 90 QQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNGSANGL 221
Score = 28.5 bits (62), Expect = 3.0
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 18/88 (20%)
Frame = +3
Query: 455 AAMNGGYYQGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQ------------------Q 496
AA+ Q QQ Q Q QQQ Q QQQ + A ++ +
Sbjct: 81 AALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSRDRAHLLNGSANGLVGNSGTANALATK 260
Query: 497 QQQQQMQQQLQQQQMQQGNMNNMYPQHM 524
+++++ LQ+ + + M + ++M
Sbjct: 261 MYEERLKLPLQRDSLDEAAMKQRFGENM 344
>TC17113 weakly similar to UP|Q9LFU8 (Q9LFU8) Proline-rich protein, partial
(25%)
Length = 1077
Score = 55.1 bits (131), Expect = 3e-08
Identities = 60/172 (34%), Positives = 66/172 (37%), Gaps = 3/172 (1%)
Frame = -2
Query: 239 DIMDLPMQMHMKGKSGNYGEVKNGNGGGKKGGDD-GGKKNKGEKQKGGGGDWGDEKNSSK 297
+I LP + GK G G G GGG K G GGK NKGE GG W
Sbjct: 827 EIGGLPGGGNNGGKGGKNGGGGGGGGGGVKPGITIGGKGNKGEGGCFDGGGW-------- 672
Query: 298 KKNGKGKNGGG-GFLVKFLGLGKKSKKGGGAADTTNKKKNNGGGGNSNNSKGKDGKKGEK 356
NG G NGGG G LG+ GGG K+ GG G N S G G K
Sbjct: 671 --NGLGINGGGLGGG*NGLGI-----SGGGLGG*NGLGKSGGGLGGWNGSGKSGGGLG*K 513
Query: 357 -LDKVEFDFQDFDITPHGKSGKGGNGNGNGKGAPAKGNANNGHGSNNNGNGG 407
L I G G G NG NG G +G NG G + G
Sbjct: 512 GLGIRGGG*NGLGINGGG*KGLGTNGG*NGLG--IRGGGKNGIGGKKKKSSG 363
Score = 33.1 bits (74), Expect = 0.12
Identities = 35/107 (32%), Positives = 38/107 (34%)
Frame = -2
Query: 307 GGGFLVKFLGLGKKSKKGGGAADTTNKKKNNGGGGNSNNSKGKDGKKGEKLDKVEFDFQD 366
G F V+ GL GGG NNGG G N G G G K
Sbjct: 845 GEEFFVEIGGL-----PGGG---------NNGGKGGKNGGGGGGGGGGVKP--------- 735
Query: 367 FDITPHGKSGKGGNGNGNGKGAPAKGNANNGHGSNNNGNGGHMGPMG 413
IT GK KG G +G G G G G NG G G +G
Sbjct: 734 -GITIGGKGNKGEGGCFDGGGWNGLGINGGGLGGG*NGLGISGGGLG 597
>TC16918 weakly similar to UP|Q9FJH5 (Q9FJH5) Gb|AAC98457.1 (At5g60800),
partial (24%)
Length = 498
Score = 54.3 bits (129), Expect = 5e-08
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +2
Query: 5 KVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKL-KSSGKHAEL 63
K+++HCEGC +K+K+ ++ EGV +V + E KV VTG D KL K+ + + K +L
Sbjct: 149 KLDLHCEGCIKKIKRTVRHFEGVENVKAELEANKVTVTGKFDAVKLQAKIAEKTKKKVDL 328
Query: 64 WGGQKAMMINQNQNFQQQQPQFKNMQIDNNKGGKNN--KPQNQKGQKGGV 111
+ +++P+ K ++ K++ KP+ +K ++ V
Sbjct: 329 VSAPPKKDAGAGEKSPEKKPEEKKSDEKKSEEKKSDEKKPEEKKPKESTV 478
>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
factor PosF21 (AtbZIP59), partial (17%)
Length = 570
Score = 53.1 bits (126), Expect = 1e-07
Identities = 29/56 (51%), Positives = 34/56 (59%), Gaps = 2/56 (3%)
Frame = +1
Query: 463 QGMQQMQPNPYHQQQQQHQQQQ--QQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNM 516
Q QQ+Q +P QQ QHQ QQ QQQQ QQ QQQMQQQ Q+Q Q G++
Sbjct: 85 QQFQQLQIHPQKHQQHQHQFQQPIQQQQQQQQQPIQQPQQQMQQQQQEQHQQSGDL 252
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Frame = +1
Query: 457 MNGGYYQGMQQMQPNPYH----------QQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQL 506
MN + G QQ P+ + QQ Q H Q+ QQ Q+ Q QQQQ QQQ
Sbjct: 10 MNYASFGGGQQFYPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQ--FQQPIQQQQQQQQQ 183
Query: 507 QQQQMQQGNMNNMYPQHMMYG 527
QQ QQ QH G
Sbjct: 184 PIQQPQQQMQQQQQEQHQQSG 246
>AV422734
Length = 448
Score = 52.8 bits (125), Expect = 2e-07
Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +1
Query: 474 HQQQQQHQQQQQQQQYMAMMMQQQQQQQ-----MQQQLQQQQMQQGNMNNMYPQHMMYGG 528
HQQ Q QQQ QQ Q M+ QQQQQQQ Q Q QQQQ QQ + +P +
Sbjct: 91 HQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQAAAISRFPSSIDAHL 270
Query: 529 GRPHPSMNYMGPPPMPSHPM 548
P P P P++P+
Sbjct: 271 RPIRPINLQQNPNPNPNNPI 330
Score = 48.5 bits (114), Expect = 3e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +1
Query: 461 YYQGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQ 505
+ Q Q Q + HQQQ QQQQQQQQ+ ++ Q Q+QQQ QQQ
Sbjct: 91 HQQHQHQQQQHQQHQQQLMLQQQQQQQQHFLLLQQLQKQQQQQQQ 225
Score = 35.0 bits (79), Expect = 0.033
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 466 QQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGN 515
Q PNP + HQ + QQQQQQ QQQ QQ+ ++ GN
Sbjct: 298 QNPNPNPNNPILNLHQNPNSNH----LQQQQQQQQPQQQQQQQKMVRPGN 435
>BP052316
Length = 397
Score = 49.7 bits (117), Expect = 1e-06
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +2
Query: 2 CLLKVNIHCEGCEQKVK-KLLQKIEGVYSVNIDAEQG-KVLVTGDVDPAKLLKKL 54
C+LKVNIHC+GC+QKV+ ++++ + V I KV V+G VD A L+KKL
Sbjct: 197 CVLKVNIHCDGCKQKVQANSFRELKVFHQVQIACSNSQKVTVSGSVDSATLIKKL 361
>AW720417
Length = 554
Score = 48.5 bits (114), Expect = 3e-06
Identities = 27/55 (49%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Frame = +3
Query: 469 QPNPYHQQQQQHQ----------QQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQ 513
QP P+ QQQQQHQ QQ QQQ+ Q QQ Q QQ QQQQ QQ
Sbjct: 18 QPRPHQQQQQQHQYVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQ 182
Score = 45.8 bits (107), Expect = 2e-05
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +3
Query: 466 QQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMN 517
+ M PN QQQHQQ Q Q QQQQQQQ QQ L++ Q+ + N
Sbjct: 66 RHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWLRRTQLGGNDTN 221
Score = 38.1 bits (87), Expect = 0.004
Identities = 24/54 (44%), Positives = 25/54 (45%), Gaps = 2/54 (3%)
Frame = +3
Query: 471 NPYHQQQQQHQQQQQQQQYMAMMM--QQQQQQQMQQQLQQQQMQQGNMNNMYPQ 522
NP Q + QQQQQ Q MM QQQ QQ QQ Q Q QQ N Q
Sbjct: 6 NPGFQPRPHQQQQQQHQYVQRHMMPNQQQYHQQQHQQNQPQYHQQHQHNQQQQQ 167
Score = 37.0 bits (84), Expect = 0.009
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 461 YYQGMQQMQPNPYHQQQQQHQQQQQQQQ 488
Y+Q Q YHQQ Q +QQQQQQQQ
Sbjct: 93 YHQQQHQQNQPQYHQQHQHNQQQQQQQQ 176
Score = 36.6 bits (83), Expect = 0.011
Identities = 17/40 (42%), Positives = 20/40 (49%)
Frame = +3
Query: 458 NGGYYQGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQ 497
N Y Q Q P + QQ QH QQQQQQQ + + Q
Sbjct: 81 NQQQYHQQQHQQNQPQYHQQHQHNQQQQQQQQQQWLRRTQ 200
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 47.4 bits (111), Expect = 6e-06
Identities = 30/64 (46%), Positives = 36/64 (55%), Gaps = 7/64 (10%)
Frame = +2
Query: 469 QPNPYHQQQQQHQQQ-------QQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYP 521
Q P QQQQQ QQQ QQQQQ +QQQQ QMQQQ Q Q+QQ ++ + P
Sbjct: 2 QQLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQ-QLPQLQQQQLSQLQP 178
Query: 522 QHMM 525
Q +
Sbjct: 179 QQQL 190
Score = 47.0 bits (110), Expect = 8e-06
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +2
Query: 463 QGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYPQ 522
Q QQ+Q P Q Q QQQQQ Q + Q QQQQ+ QLQQQQ+ Q PQ
Sbjct: 20 QQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLSQMQQQQLP-QLQQQQLSQLQPQQQLPQ 196
Score = 42.7 bits (99), Expect = 2e-04
Identities = 26/64 (40%), Positives = 29/64 (44%)
Frame = +2
Query: 465 MQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYPQHM 524
+QQ Q Q QQQ Q QQQQ + QQ Q Q QQQL Q Q Q Q M
Sbjct: 65 LQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQLQQLQHQQLPQQQQQM 244
Query: 525 MYGG 528
+ G
Sbjct: 245 VGAG 256
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/70 (42%), Positives = 34/70 (47%), Gaps = 10/70 (14%)
Frame = +2
Query: 463 QGMQQMQPNPYHQQQQQHQQQQQ----QQQYMAMMMQQQQQQQMQ----QQL--QQQQMQ 512
Q QQ Q QQQ QQQQ QQQ ++ + QQQ Q+Q QQL QQQQM
Sbjct: 68 QQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLPQLQQLQHQQLPQQQQQMV 247
Query: 513 QGNMNNMYPQ 522
M Y Q
Sbjct: 248 GAGMGQAYVQ 277
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/68 (41%), Positives = 32/68 (46%), Gaps = 1/68 (1%)
Frame = +2
Query: 463 QGMQQMQPNPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNM-YP 521
Q QQ Q QQQQ Q QQQQ +QQQQ Q+Q Q Q Q+QQ +
Sbjct: 62 QLQQQQQQQLPQVQQQQLSQMQQQQ---LPQLQQQQLSQLQPQQQLPQLQQLQHQQLPQQ 232
Query: 522 QHMMYGGG 529
Q M G G
Sbjct: 233 QQQMVGAG 256
Score = 33.5 bits (75), Expect = 0.095
Identities = 33/121 (27%), Positives = 42/121 (34%), Gaps = 17/121 (14%)
Frame = +2
Query: 414 QMGAMNQMAAMNRMGPMGQMGSMDQMRSMPAVQGLPAGAAAAAMNGGYYQGMQQMQPNPY 473
Q+ + Q + + P Q + +P VQ Q QQ P
Sbjct: 5 QLPQLQQQQQLQQQPPQLTQLQQQQQQQLPQVQQQQLS-----------QMQQQQLPQLQ 151
Query: 474 HQQQQQHQQQQQQQQYMAMMMQQ--QQQQQM---------------QQQLQQQQMQQGNM 516
QQ Q Q QQQ Q + QQ QQQQQM Q + Q Q+ QG
Sbjct: 152 QQQLSQLQPQQQLPQLQQLQHQQLPQQQQQMVGAGMGQAYVQGPGRSQMVSQGQVSQGPT 331
Query: 517 N 517
N
Sbjct: 332 N 334
>TC9612 similar to PIR|T06397|T06397 isoprenylated protein FP6 - soybean
(fragment) {Glycine max;}, partial (32%)
Length = 681
Score = 46.2 bits (108), Expect = 1e-05
Identities = 21/53 (39%), Positives = 34/53 (63%)
Frame = +1
Query: 3 LLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLK 55
+LKV +H + +QK K + I GV SV++D K+ +TGD+DP ++ KL+
Sbjct: 133 VLKVELHDDKIKQKAMKSVSGISGVESVSVDMGSKKLTLTGDIDPVHVVSKLR 291
>TC13114
Length = 504
Score = 45.8 bits (107), Expect = 2e-05
Identities = 30/86 (34%), Positives = 44/86 (50%), Gaps = 9/86 (10%)
Frame = +3
Query: 17 VKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAELWGG--QKAMMINQ 74
VK+ L K+EGV S NID E +V V G + P +L+ + S K AE W G KA+ I
Sbjct: 3 VKRHLSKMEGVTSFNIDVESKRVTVMGHISPVVVLESI-SKVKRAEFWNG*RLKAIKIQS 179
Query: 75 NQN-------FQQQQPQFKNMQIDNN 93
N + Q F+N+ + ++
Sbjct: 180TLN*MCSSGDAESQSQIFRNLSLSSD 257
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.309 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,849,786
Number of Sequences: 28460
Number of extensions: 133576
Number of successful extensions: 3986
Number of sequences better than 10.0: 331
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2854
length of query: 566
length of database: 4,897,600
effective HSP length: 95
effective length of query: 471
effective length of database: 2,193,900
effective search space: 1033326900
effective search space used: 1033326900
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC136503.4