
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135161.1 - phase: 0
(820 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP065719 55 6e-08
TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pro... 50 1e-06
TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial ... 45 4e-05
TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structura... 44 8e-05
TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, part... 44 1e-04
TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fra... 42 5e-04
AU251673 41 7e-04
TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%) 41 9e-04
TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transc... 41 9e-04
AW719943 39 0.003
AV408212 38 0.007
TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall prot... 37 0.010
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 37 0.013
TC17922 36 0.022
AV429304 36 0.028
TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precurso... 36 0.028
TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, par... 35 0.037
TC14545 similar to UP|Q9FT78 (Q9FT78) P23 co-chaperone, partial ... 35 0.037
CN825698 35 0.048
TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28... 35 0.063
>BP065719
Length = 567
Score = 54.7 bits (130), Expect = 6e-08
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 189 QVPHKFKIPDFEKYKGSSCPE--EHLKMYVRRMPAYAQDDQILIYYFQESLTGPASKWYT 246
++P +K+P F K+ G S EH+ Y A ++ + + YF SLT A W+T
Sbjct: 159 ELPRGWKVPKFTKFSGDSGESTVEHIARYQIEAGDLAINENLKMKYFPSSLTKNAFTWFT 338
Query: 247 NLDKTRVQTFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETFKEYAQRWRDTAAQVS 306
L V T+ L F EQ+ + + DL ++ + E+ +Y R+R ++
Sbjct: 339 TLAPRSVHTWAQLERIFHEQF-FRGECKVSXKDLASVKRKPAESIDDYLNRFRMLKSRCF 515
Query: 307 PRIEEKEMTKL 317
+ E E+ L
Sbjct: 516 THVSEHELVVL 548
>TC15341 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
partial (33%)
Length = 1002
Score = 50.4 bits (119), Expect = 1e-06
Identities = 41/131 (31%), Positives = 54/131 (40%), Gaps = 2/131 (1%)
Frame = +1
Query: 361 TTPASGTKKTGNHFPRKKEQEVGMVTHGGPQQTY--PAYQHIAAITPTSHPFQQTNNHPQ 418
+TP G +T P+ + + P Q Y P Q ++ + P Q N
Sbjct: 676 STPLPGNTQTVAQLPQNQ--------YLPPDQQYRTPQMQDMSRVAP-----QPCTNXSG 816
Query: 419 IPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQ 478
P + QYPQ+ Q QQQ QQQ QQ+P QQ PQQ QP +
Sbjct: 817 XSPPPPVQQYPQY-----------QQPQQQQQQQQQQQQWP-QQLPQQVQPTQPPSMQSP 960
Query: 479 QPRPPRMPINP 489
Q RPP P+ P
Sbjct: 961 QIRPPSSPVYP 993
Score = 42.0 bits (97), Expect = 4e-04
Identities = 39/115 (33%), Positives = 48/115 (40%), Gaps = 5/115 (4%)
Frame = +1
Query: 390 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQF--PQNPSPQNVQPQNVQQ 447
PQQ PAY + P + T Q+PQ +P Q+ PQ V PQ
Sbjct: 649 PQQ--PAYYIPSTPLPGN-----TQTVAQLPQNQYLPPDQQYRTPQMQDMSRVAPQPCTN 807
Query: 448 QNFQQQP--YQQYP-YQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 499
+ P QQYP YQQ QQ QQQ QQ PQQ P P + ++ P
Sbjct: 808 XSGXSPPPPVQQYPQYQQPQQQQQQQQQQQQWPQQLPQQVQPTQPPSMQSPQIRP 972
>TC8445 similar to UP|O80910 (O80910) At2g38410 protein, partial (7%)
Length = 841
Score = 45.4 bits (106), Expect = 4e-05
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = +1
Query: 384 MVTHGGPQ----QTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQN 439
M H PQ Q P QH P HP Q + PQ+ PQ PQ+ Q Q P PQ+
Sbjct: 7 MQLHNEPQPLQYQPQPHLQH----QPQHHPHFQPHPQPQLQSQPQ-PQHIQQSQ-PQPQS 168
Query: 440 VQPQNVQQQNFQ---QQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMP 486
QPQ++QQ Q Q Q P Q+ Q+FQ P P P
Sbjct: 169 -QPQHIQQPQPQPQLQHIQQSQPQPQFQNQHFQYPGTYPPPPWAATPGYP 315
>TC18149 weakly similar to UP|Q91BL3 (Q91BL3) Essential structural protein
pp78/81, partial (5%)
Length = 710
Score = 44.3 bits (103), Expect = 8e-05
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 3/150 (2%)
Frame = +3
Query: 375 PRKKEQEVGMVTHGGPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQN 434
P Q + +V P Q + P + F QT Q P +PQ +
Sbjct: 84 PVNLPQSIPVVPPPNAPPQLPPQQGLPPSFPPPNQFSQT-------QIPAVPQRDPYFPP 242
Query: 435 PSPQNVQPQNVQQQNFQQQPYQQ---YPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIP 491
P P QQ QP+ Q P+QQY QQ Q Q P Q +PP INP P
Sbjct: 243 PVQSQETPNQQYQQPLAPQPHPQPGAPPHQQY-QQTPHPQYSQPAPPQHQPPIPSINP-P 416
Query: 492 VTYAELLPGLLKKNLVQTRTAPPIPEKLPS 521
+ L + + V ++T PP + PS
Sbjct: 417 QLQSSLGHHVEEPPYVPSQTYPPNLRQPPS 506
>TC19740 similar to UP|FKH_DROME (P14734) Fork head protein, partial (4%)
Length = 622
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = +3
Query: 432 PQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 489
P NP Q Q Q Q Q FQQQ Q+ + Q P F + P PQQP PP M P
Sbjct: 105 PHNPQHQQHQHQQHQHQ-FQQQQQPQHFHHQQPGPEFHRGPPPPPPQQPHPPPMMRQP 275
>TC15540 similar to UP|Q9NGS5 (Q9NGS5) Prespore protein MF12 (Fragment),
partial (6%)
Length = 806
Score = 41.6 bits (96), Expect = 5e-04
Identities = 30/65 (46%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 421 QYPQIPQYPQFPQNPSPQNVQPQNVQQQNF---QQQPYQQYPYQQYPQQNFQQ----QPY 473
Q PQ+ Q Q Q P PQ Q Q QQQ QQQ Q QQ PQ QQ QP
Sbjct: 5 QLPQLQQQQQLQQQP-PQLTQLQQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQ 181
Query: 474 QQRPQ 478
QQ PQ
Sbjct: 182 QQLPQ 196
Score = 36.6 bits (83), Expect = 0.016
Identities = 25/59 (42%), Positives = 28/59 (47%)
Frame = +2
Query: 418 QIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQR 476
Q Q Q+PQ Q + Q PQ QQQ Q QP QQ P Q Q QQ P QQ+
Sbjct: 68 QQQQQQQLPQVQQQQLSQMQQQQLPQLQQQQLSQLQPQQQLP--QLQQLQHQQLPQQQQ 238
>AU251673
Length = 413
Score = 41.2 bits (95), Expect = 7e-04
Identities = 26/119 (21%), Positives = 53/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 237 LTGPASKWYTNLDKTRVQ-----TFRDLCEAFVEQYSYNVDMTPDRSDLQAMTQGDKETF 291
L G A WY L + + T+ D F+ ++ D + + Q + T
Sbjct: 44 LEGVARDWYNVLTRAKPVGSPPWTWADFSAEFMNRFLPQSVRDGFVRDFERLEQAEGMTV 223
Query: 292 KEYAQRWRDTAAQVSPRIEEKEMTKLFLKTLNHFYYKKMVGSTPKSFAEMVGMGVQLEE 350
EY+ + + V + E+E K F++ L + +K +VGS + +E++ + + +E+
Sbjct: 224 SEYSAHFTHLSRYVPYPLLEEERVKRFVRGLKEYLFKSVVGSKSSTLSEVLSLALLVEQ 400
>TC10129 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (10%)
Length = 562
Score = 40.8 bits (94), Expect = 9e-04
Identities = 32/105 (30%), Positives = 39/105 (36%), Gaps = 8/105 (7%)
Frame = +1
Query: 390 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYP--------QIPQYPQFPQNPSPQNVQ 441
P+ P+Y +P P NNHP P Q P P P+ PSP + Q
Sbjct: 88 PKTPSPSYSPPNVPSPPKAP--SPNNHPPYTPTPPKTPSPTSQPPYIPLPPKTPSPIS-Q 258
Query: 442 PQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMP 486
P +V P Q PY P + P Q P P PP P
Sbjct: 259 PPHVPTPPSTPSPISQPPYTPTPPKT--PSPTSQPPHTPTPPNTP 387
Score = 35.4 bits (80), Expect = 0.037
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = +1
Query: 395 PAYQHIAAITPTSHPFQQTNNHPQIPQYP----QIPQYPQFPQNPSPQNVQPQNVQQQNF 450
P Y + TP+ P Q + P P P Q P P P+ PSP + P N
Sbjct: 211 PPYIPLPPKTPS--PISQPPHVPTPPSTPSPISQPPYTPTPPKTPSPTSQPPHTPTPPN- 381
Query: 451 QQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPP 483
P Q PY P + P Q P P PP
Sbjct: 382 TPSPISQPPYTPTPPKT--PSPTNQPPHIPSPP 474
>TC16093 weakly similar to UP|PF21_ARATH (Q04088) Possible transcription
factor PosF21 (AtbZIP59), partial (17%)
Length = 570
Score = 40.8 bits (94), Expect = 9e-04
Identities = 33/91 (36%), Positives = 36/91 (39%)
Frame = +1
Query: 388 GGPQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQ 447
GG QQ YP + H + FQQ HPQ Q Q QQ
Sbjct: 28 GGGQQFYP-HNHSMHTLLAAQQFQQLQIHPQKHQQHQ------------------HQFQQ 150
Query: 448 QNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQ 478
QQQ QQ P QQ PQQ QQQ +Q Q
Sbjct: 151 PIQQQQQQQQQPIQQ-PQQQMQQQQQEQHQQ 240
Score = 28.9 bits (63), Expect = 3.4
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 431 FPQNPSPQNV-QPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRP-QQPR 481
+P N S + Q QQ Q +QQ+ +Q + Q QQQ QQ+P QQP+
Sbjct: 46 YPHNHSMHTLLAAQQFQQLQIHPQKHQQHQHQ-FQQPIQQQQQQQQQPIQQPQ 201
>AW719943
Length = 508
Score = 38.9 bits (89), Expect = 0.003
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2
Query: 436 SPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQ 479
+PQ Q QQQ FQ P QQ P+QQ N QQQ +QQ+ QQ
Sbjct: 80 TPQQQQQPQQQQQLFQ--PQQQSPFQQNSLFNSQQQQFQQQQQQ 205
Score = 31.2 bits (69), Expect = 0.69
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = +2
Query: 429 PQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQ 475
PQ Q P Q Q QQ FQQ QQ+ QQ QQQ Q
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQ 223
Score = 29.3 bits (64), Expect = 2.6
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 417 PQIPQYPQIPQYPQFPQNPSP--QNVQPQNVQQQNFQQQPYQQYPYQQY 463
PQ Q PQ Q PQ SP QN + QQQ QQQ QQ +Q +
Sbjct: 83 PQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLF 229
>AV408212
Length = 362
Score = 37.7 bits (86), Expect = 0.007
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 433 QNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRP 482
Q+P Q Q Q++Q Q Q + QQ QQ QQQ QQ+ QQ +P
Sbjct: 12 QSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQP 161
Score = 36.6 bits (83), Expect = 0.016
Identities = 21/59 (35%), Positives = 26/59 (43%)
Frame = +3
Query: 426 PQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPR 484
PQ Q Q++Q Q + Q QQ QQ QQ QQQ QQ+PQ + R
Sbjct: 6 PQQSPHQQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQQQQQQQQSQQQQPQSQQQSR 182
Score = 30.0 bits (66), Expect = 1.5
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +3
Query: 421 QYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQRPQQP 480
Q Q Q+ Q Q ++ Q QQQ QQQ QQ QQ+ QQQP Q+ +
Sbjct: 24 QQQQQQQHMQMQQILLQRHAALQQQQQQQQQQQ------QQQQQQQSQQQQPQSQQQSRD 185
Query: 481 R 481
R
Sbjct: 186 R 188
>TC7888 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
partial (60%)
Length = 913
Score = 37.4 bits (85), Expect = 0.010
Identities = 24/97 (24%), Positives = 39/97 (39%), Gaps = 2/97 (2%)
Frame = +3
Query: 405 PTSHPFQQTNNHPQIPQYPQI--PQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQ 462
P +P P +P+ P + P P+ P P +P +V + + PY P
Sbjct: 342 PPHYPKPPVVKPPHVPKPPVVKPPHVPKPPIVKPPYVPKPPHVPKPPIVKPPYVPKPPVV 521
Query: 463 YPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 499
P + P P P+PP +P+ P V ++P
Sbjct: 522 KPPPYVPKPPVVSPPYVPKPPVVPVTPPYVPKPPVVP 632
Score = 32.3 bits (72), Expect = 0.31
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +3
Query: 417 PQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNFQQQPYQQR 476
P +P+ P +P P P P P V+P V + +P P YP P +
Sbjct: 603 PYVPKPPVVPVTP--PYVPKPPIVKPPIVYPPPYVPKPPIVKPPIVYPPPYVPTPPIVKP 776
Query: 477 PQQPRPPRMPINPI 490
P PP +P+ P+
Sbjct: 777 PIVYPPPYVPLPPV 818
Score = 28.5 bits (62), Expect = 4.5
Identities = 29/122 (23%), Positives = 45/122 (36%)
Frame = +3
Query: 395 PAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQP 454
P + A P HP + H PQ+P I + P P V+P + P
Sbjct: 126 PYCPYPAPSKPPKHPIVKPPVHKP-PQHPPIVKPPVHKPPQHPPIVKPP------VHKPP 284
Query: 455 YQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLPGLLKKNLVQTRTAPP 514
+YP P+ +P + P P+PP + +P P + K +V+ P
Sbjct: 285 --KYPPSHGPEPCPPPKPSPKPPHYPKPPVVKPPHVPKPPVVKPPHVPKPPIVKPPYVPK 458
Query: 515 IP 516
P
Sbjct: 459 PP 464
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 37.0 bits (84), Expect = 0.013
Identities = 36/139 (25%), Positives = 58/139 (40%), Gaps = 2/139 (1%)
Frame = +1
Query: 402 AITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQ 461
A T H +H ++P +P+ +P FP P V P + + + P
Sbjct: 109 ATTSHHHFLPP*RHHSRLP-HPRPTLFPPFPLPRLPPLVPPPPLPR-------LLRPPPP 264
Query: 462 QYPQQNFQQQPYQQR--PQQPRPPRMPINPIPVTYAELLPGLLKKNLVQTRTAPPIPEKL 519
P + +P++ R P PPR + P+P LP LL++ L + PP+P +
Sbjct: 265 PPPPPPLRPRPHRHRLRPLLRHPPRRQMEPLP------LPPLLQRRLPRDLPLPPLP-RA 423
Query: 520 PSWYRLDQTCDFHEGGRGH 538
P ++R FH R H
Sbjct: 424 PRFHRPQ---GFHRRKRRH 471
>TC17922
Length = 470
Score = 36.2 bits (82), Expect = 0.022
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +1
Query: 49 PPPPPPIRTQAEASSSWTLCADTPRQSAPQRSAPWFPPFTAGEIFRPITCEAQMPTHQYT 108
PPPPPPI ++ +S+ P Q++P S+P P + PT Q T
Sbjct: 58 PPPPPPITSKVPTTSTSRSTT*LPPQASPPTSSPPSSP----------PSRSTTPTSQAT 207
Query: 109 AQVPLPAMRVTPATMTYSAP 128
A P + V+ T S P
Sbjct: 208 ANAPPYSPNVSTRHQTPSGP 267
>AV429304
Length = 355
Score = 35.8 bits (81), Expect = 0.028
Identities = 33/110 (30%), Positives = 42/110 (38%)
Frame = +3
Query: 390 PQQTYPAYQHIAAITPTSHPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQN 449
PQ + Y I TP+ P N P PQ P P P P+ PSP P NV
Sbjct: 45 PQTPHTPYVPIPPKTPS--PVYSPPNVPSPPQTPHAPYVPTPPKTPSPV-YSPPNVPSP- 212
Query: 450 FQQQPYQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINPIPVTYAELLP 499
Q P+ Y P + P P PP++ I ++LLP
Sbjct: 213 -PQTPHAPY----VPTPSKTPSXVYSPPNVPTPPKILHLFILHLMSQLLP 347
Score = 34.7 bits (78), Expect = 0.063
Identities = 27/81 (33%), Positives = 31/81 (37%)
Frame = +3
Query: 409 PFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQNF 468
P N P PQ P P P P+ PSP P NV Q P+ PY P +
Sbjct: 12 PTYSPPNVPSPPQTPHTPYVPIPPKTPSPV-YSPPNVPSP--PQTPHA--PYVPTPPKT- 173
Query: 469 QQQPYQQRPQQPRPPRMPINP 489
P P P PP+ P P
Sbjct: 174 -PSPVYSPPNVPSPPQTPHAP 233
>TC15784 similar to UP|PE31_ARATH (Q9LHA7) Peroxidase 31 precursor (Atperox
P31) (ATP41) , partial (38%)
Length = 475
Score = 35.8 bits (81), Expect = 0.028
Identities = 30/95 (31%), Positives = 42/95 (43%), Gaps = 4/95 (4%)
Frame = +2
Query: 399 HIAAITPTS--HPFQQTNNHP-QIPQY-PQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQP 454
H+ I P H QQTN+HP P++ P +P P+ P PQ ++
Sbjct: 131 HVPTILPNHPRHRHQQTNHHPHHRPRHAPPLP-----PRLPPPQRLR------------- 256
Query: 455 YQQYPYQQYPQQNFQQQPYQQRPQQPRPPRMPINP 489
+ +P P NF QQ +R QP PPR + P
Sbjct: 257 -RLHP----PLLNFLQQSRTRRRHQPLPPRRRLRP 346
Score = 35.8 bits (81), Expect = 0.028
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Frame = +1
Query: 38 AVTEAQAQSQAPPPPPPIRTQAEASSSWTLCADTPRQSAPQ-------------RSAPWF 84
+ T + PPPP P R+ + ++++ T A TP S+PQ +P
Sbjct: 157 SATPSPTNKSPPPPPAPPRSASSSTTASTPTAATPPSSSPQLPSTKPNATPTSTSPSPAT 336
Query: 85 PPFTAGEIFRPITCEAQMPTHQYTAQVPLPA 115
P ++ E+ P A P+ T+ P PA
Sbjct: 337 PSTSSSELKPPSNSLAPTPSPAPTSSPPPPA 429
>TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, partial (28%)
Length = 1306
Score = 35.4 bits (80), Expect = 0.037
Identities = 21/62 (33%), Positives = 29/62 (45%), Gaps = 8/62 (12%)
Frame = +2
Query: 42 AQAQSQAPPPPPPI------RTQAEASSSWTLCADTPRQS--APQRSAPWFPPFTAGEIF 93
A S +PP P P+ T A ++SS TP S +P ++PW PP T+G
Sbjct: 116 ASPSSSSPPSPTPLAAPTAPSTAASSTSSTARFPQTPNPSTASPPPTSPWTPPATSGSAS 295
Query: 94 RP 95
P
Sbjct: 296 LP 301
>TC14545 similar to UP|Q9FT78 (Q9FT78) P23 co-chaperone, partial (46%)
Length = 1127
Score = 35.4 bits (80), Expect = 0.037
Identities = 24/87 (27%), Positives = 37/87 (41%)
Frame = -3
Query: 408 HPFQQTNNHPQIPQYPQIPQYPQFPQNPSPQNVQPQNVQQQNFQQQPYQQYPYQQYPQQN 467
HP Q +P +P P +P P P P ++Q Q ++ YP+ Q +
Sbjct: 639 HPSHQI*RNPFLPILPFLPILPFHPSLPFHPSLQV-------LQDLHHRPYPFHQISRS- 484
Query: 468 FQQQPYQQRPQQPRPPRMPINPIPVTY 494
PYQ + Q P PI P P+++
Sbjct: 483 -PSLPYQVQQQHLLHPHPPIYPNPLSH 406
>CN825698
Length = 704
Score = 35.0 bits (79), Expect = 0.048
Identities = 17/40 (42%), Positives = 22/40 (54%), Gaps = 2/40 (5%)
Frame = +3
Query: 453 QPYQQYPYQQYPQQNFQQ--QPYQQRPQQPRPPRMPINPI 490
+P QQ P Q P Q Q QP P +PRPP +P +P+
Sbjct: 273 RPQQQLPPAQRPGQGLQAPPQPLTSFPTRPRPPSLPSSPL 392
>TC15534 weakly similar to GB|AAO63420.1|28950993|BT005356 At5g28040
{Arabidopsis thaliana;}, partial (8%)
Length = 937
Score = 34.7 bits (78), Expect = 0.063
Identities = 31/114 (27%), Positives = 46/114 (40%)
Frame = -3
Query: 2 DEMAELIKTMAETQTQAQAQIQAQAQALAQAQTQAQAVTEAQAQSQAPPPPPPIRTQAEA 61
D+ +K A + + ++ + ++ + +T A A A PP P P A
Sbjct: 809 DQPLSQVKHAAAEEEELSSEEEGSSEEEEEDETTAPAPPAATTSHTKPPQPEPESDSATQ 630
Query: 62 SSSWTLCADTPRQSAPQRSAPWFPPFTAGEIFRPITCEAQMPTHQYTAQVPLPA 115
S S +DT AP SAP P +P+ Q TH+ AQ P PA
Sbjct: 629 SDSE---SDTDSDQAPSASAPTPNPKVKPLATKPMD---QTQTHKPKAQ-PSPA 489
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.316 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,009,858
Number of Sequences: 28460
Number of extensions: 228708
Number of successful extensions: 3955
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3478
length of query: 820
length of database: 4,897,600
effective HSP length: 98
effective length of query: 722
effective length of database: 2,108,520
effective search space: 1522351440
effective search space used: 1522351440
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135161.1