BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124964.9 - phase: 0
(108 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC18050 132 9e-33
TC8096 weakly similar to GB|AAF89661.1|9622185|AF168782 acinusL ... 33 0.007
BI418940 33 0.009
TC13425 weakly similar to UP|Q7XJL5 (Q7XJL5) At2g17100 protein, ... 32 0.016
AV410275 32 0.016
TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, par... 32 0.021
TC16524 similar to GB|AAL69537.1|18491137|AY074839 AT5g45420/MFC... 31 0.027
TC13525 similar to UP|LB30_ARATH (O81323) LOB domain protein 30,... 31 0.036
AV416309 31 0.036
TC19175 similar to UP|Q9SAL0 (Q9SAL0) T8K14.20 protein (At1g7938... 31 0.036
TC19458 weakly similar to UP|Q9STE8 (Q9STE8) Chloroplast import-... 31 0.036
AV409168 30 0.047
AV776568 30 0.047
TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-l... 27 0.052
TC14867 weakly similar to GB|AAC48255.2|14916375|AF000298 Prion-... 30 0.061
TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha galactosyltra... 30 0.080
TC9170 similar to UP|Q9FF36 (Q9FF36) Gb|AAF31027.1, partial (37%) 30 0.080
AV425102 30 0.080
BI417928 27 0.091
TC12667 similar to PIR|D96525|D96525 protein T1N15.19 [imported]... 28 0.23
>TC18050
Length = 695
Score = 132 bits (332), Expect = 9e-33
Identities = 68/96 (70%), Positives = 77/96 (79%)
Frame = +1
Query: 13 LARRALMGFSGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKE 72
L RRAL+G SGAVVLGL W DEQSA A++RPPPPPPKEKKDPN+S QAKV+ASKKRKE
Sbjct: 214 LRRRALVGLSGAVVLGLGWGDEQSAMGASKRPPPPPPKEKKDPNVSGVQAKVMASKKRKE 393
Query: 73 AMKAEVARLREQGKAVNINKEPPPPPPVVAAPPASE 108
AMK +A+LRE+GK +INKE PP P A PPA E
Sbjct: 394 AMKESIAKLREKGK--SINKELPPAPQ-EAPPPAPE 492
>TC8096 weakly similar to GB|AAF89661.1|9622185|AF168782 acinusL protein
{Mus musculus;} , partial (3%)
Length = 1044
Score = 33.1 bits (74), Expect = 0.007
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +1
Query: 35 QSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEP 94
+ A+ PPPPPP+ AA V + + E + R+Q + I
Sbjct: 1 EDAKMKLEAPPPPPPQ--------AASVSVPTVAPAPSSSQPEPSP-RQQREQHPIPVAL 153
Query: 95 PPPPPVVAAPPAS 107
PPPPP+ APP +
Sbjct: 154 PPPPPLSRAPPVA 192
>BI418940
Length = 550
Score = 32.7 bits (73), Expect = 0.009
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 42 RRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVV 101
RRPPPP D +SA ++R++ L + K NI+ PPPPPP++
Sbjct: 157 RRPPPPENIPNFDNPISAPPPPHFQLRRRRQPQHQPTLPLLSE-KNPNISA-PPPPPPLI 330
Score = 28.9 bits (63), Expect = 0.14
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +3
Query: 39 AAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAV-----NINKE 93
AA+ PP P P + P + K + + +A R + + + ++
Sbjct: 318 AASYPPPTPAPATTQTPTTPPLPLSENSGKLSNHSQQV-IAL*RAKHQPIPPSPSSLPPT 494
Query: 94 PPPPPPVVAAPP 105
PPPPPP+ PP
Sbjct: 495 PPPPPPISTPPP 530
Score = 26.9 bits (58), Expect = 0.52
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 15/70 (21%)
Frame = +1
Query: 44 PPPPPPKEKK---------------DPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAV 88
PPPPPP + D +SA ++R++ L + K
Sbjct: 118 PPPPPPLHLQLRRRRPPPPENIPNFDNPISAPPPPHFQLRRRRQPQHQPTLPLLSE-KNP 294
Query: 89 NINKEPPPPP 98
NI+ PPPPP
Sbjct: 295 NISAPPPPPP 324
Score = 23.1 bits (48), Expect = 7.4
Identities = 8/15 (53%), Positives = 9/15 (59%)
Frame = +3
Query: 44 PPPPPPKEKKDPNLS 58
PPPPPP P L+
Sbjct: 495 PPPPPPISTPPPRLT 539
>TC13425 weakly similar to UP|Q7XJL5 (Q7XJL5) At2g17100 protein, partial
(6%)
Length = 538
Score = 32.0 bits (71), Expect = 0.016
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 83 EQGKAVNINKEPPPPPPVVAAPPAS 107
++ K V+I PPPPP VAAPP S
Sbjct: 241 QETKTVSILSSPPPPPLPVAAPPHS 315
>AV410275
Length = 431
Score = 32.0 bits (71), Expect = 0.016
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 44 PPPPPPKEKKDPNLSAAQAKVLAS--KKRKEAMKAEVARLREQGKAVNINKEPPPPPPVV 101
PPPPPP PN S + S K + + +L++ + + +PPPPP +
Sbjct: 52 PPPPPPPPSWSPNPS*PPQHLHTSLCLKYPQLELKKTPKLKQSEPPLLPHSQPPPPPKIP 231
Query: 102 A 102
A
Sbjct: 232 A 234
Score = 25.0 bits (53), Expect = 2.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 94 PPPPPPVVAAPPAS 107
PPPPPP PP S
Sbjct: 37 PPPPPPPPPPPPPS 78
>TC15380 similar to UP|Q8H5P5 (Q8H5P5) OJ1003_C06.27 protein, partial (28%)
Length = 1306
Score = 31.6 bits (70), Expect = 0.021
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +2
Query: 40 AARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPP 99
+A PPPPPP + P+L ++ A+V S R+ + A + + P P
Sbjct: 287 SASLPPPPPPPPRPFPSLCSSTAEVSPSCLRRRSNSTPSA------ASSAVPSTPSSSPS 448
Query: 100 VVAAPPAS 107
+PP++
Sbjct: 449 TTVSPPST 472
>TC16524 similar to GB|AAL69537.1|18491137|AY074839 AT5g45420/MFC19_9
{Arabidopsis thaliana;}, partial (41%)
Length = 997
Score = 31.2 bits (69), Expect = 0.027
Identities = 13/47 (27%), Positives = 28/47 (58%)
Frame = -2
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNI 90
PPPPPP++++ +LS A+ + + +++ A V + G+A ++
Sbjct: 363 PPPPPPQQRRSAHLSDARISLTSVREQTRAHPICVTWIAAAGEASDL 223
>TC13525 similar to UP|LB30_ARATH (O81323) LOB domain protein 30, partial
(12%)
Length = 485
Score = 30.8 bits (68), Expect = 0.036
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 73 AMKAEVARLREQGKAVNINKEPPP-PPPVVAAPP 105
+++ E++ L+ QG + +++ PPP PP APP
Sbjct: 11 SLQGELSYLQGQGATIELHQRPPPSPPQATIAPP 112
>AV416309
Length = 277
Score = 30.8 bits (68), Expect = 0.036
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 90 INKEPPPPPPVVAAPPAS 107
+ +PPPPPP +AAP AS
Sbjct: 110 VESQPPPPPPPLAAPSAS 163
Score = 25.0 bits (53), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 45 PPPPPKEKKDPNLSAAQAKVLA 66
PPPPP P+ SA+ A V A
Sbjct: 122 PPPPPPPLAAPSASASAAAVAA 187
>TC19175 similar to UP|Q9SAL0 (Q9SAL0) T8K14.20 protein
(At1g79380/T8K14_20), partial (24%)
Length = 420
Score = 30.8 bits (68), Expect = 0.036
Identities = 18/43 (41%), Positives = 23/43 (52%)
Frame = +2
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAM 74
SDE+ + AAR PPP PPK +S A S K+K A+
Sbjct: 38 SDERISSTAARSPPPEPPK------MSGEGASRKLSTKKKYAL 148
>TC19458 weakly similar to UP|Q9STE8 (Q9STE8) Chloroplast import-associated
channel homolog (AT3g46740/T6H20_230), partial (10%)
Length = 469
Score = 30.8 bits (68), Expect = 0.036
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = -1
Query: 91 NKEPPPPPPVVAAPP 105
N+ PPPPPPVV PP
Sbjct: 268 NQPPPPPPPVVPPPP 224
Score = 26.6 bits (57), Expect = 0.67
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Frame = +1
Query: 44 PPPPPPKEK----KDPNLSAAQAKVLASKKRKE----AMKAEVARLREQGKAVNINKEPP 95
PPPPPP P+ A+A+V A +E + AE + G + + P
Sbjct: 157 PPPPPPSSSTPPLSPPSSPRAEAEVEAPPAEEEVEVGSAAAEATEMEASGPDSSPRRRPT 336
Query: 96 P 96
P
Sbjct: 337 P 339
Score = 26.2 bits (56), Expect = 0.88
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 94 PPPPPPVVAAPPAS 107
PPPPPP + PP S
Sbjct: 157 PPPPPPSSSTPPLS 198
Score = 24.6 bits (52), Expect = 2.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 44 PPPPPPKEKK 53
PPPPPP E+K
Sbjct: 232 PPPPPPVERK 203
Score = 22.3 bits (46), Expect(2) = 1.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 94 PPPPPPV 100
PPPPPPV
Sbjct: 232 PPPPPPV 212
Score = 21.2 bits (43), Expect(2) = 1.8
Identities = 6/7 (85%), Positives = 7/7 (99%)
Frame = -1
Query: 43 RPPPPPP 49
+PPPPPP
Sbjct: 265 QPPPPPP 245
>AV409168
Length = 243
Score = 30.4 bits (67), Expect = 0.047
Identities = 19/68 (27%), Positives = 30/68 (43%), Gaps = 2/68 (2%)
Frame = +2
Query: 43 RPPPPPPKEKKDPNLSAAQAKVLASKKRKEA--MKAEVARLREQGKAVNINKEPPPPPPV 100
+P P P+E + + +LA++ A AE + LR + N P P PP
Sbjct: 23 QPWIPNPQEPTTTTTTTTFSHLLAAQAAAAAPATMAEQSHLRRHPRRTRQNPSPDPTPPT 202
Query: 101 VAAPPASE 108
PP+S+
Sbjct: 203 HIQPPSSK 226
>AV776568
Length = 628
Score = 30.4 bits (67), Expect = 0.047
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Frame = +1
Query: 39 AAARRPPPPP----PKEKKDPNLSAAQAKVL 65
AAA++ PPPP PK++K P+ S A A L
Sbjct: 247 AAAKKKPPPPSAASPKKRKSPHSSPAPAPTL 339
>TC14184 similar to UP|Q93WZ6 (Q93WZ6) Abscisic stress ripening-like
protein, partial (57%)
Length = 1141
Score = 26.6 bits (57), Expect = 0.67
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 94 PPPPPPVVAAPP 105
PPPPPPV +PP
Sbjct: 475 PPPPPPVEYSPP 440
Score = 25.4 bits (54), Expect(2) = 0.052
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 90 INKEPPPPPPVVAAPP 105
+ PPPPPPV PP
Sbjct: 457 VEYSPPPPPPVP*PPP 410
Score = 23.5 bits (49), Expect(2) = 0.052
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 44 PPPPPPKEKKDP 55
PPPPPP E P
Sbjct: 475 PPPPPPVEYSPP 440
Score = 23.1 bits (48), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 95 PPPPPVVAAPPASE 108
PPPPP V PP E
Sbjct: 445 PPPPPPVP*PPPVE 404
>TC14867 weakly similar to GB|AAC48255.2|14916375|AF000298
Prion-like-(q/n-rich)-domain-bearing protein protein 75,
isoform a {Caenorhabditis elegans;} , partial (4%)
Length = 1106
Score = 30.0 bits (66), Expect = 0.061
Identities = 17/57 (29%), Positives = 26/57 (44%), Gaps = 3/57 (5%)
Frame = +3
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGK---AVNINKEPPPP 97
PPPPPPK P + K + +A+ + +L E G+ V+ + E P P
Sbjct: 432 PPPPPPKFSDAPEVKVQDKSKNLLKTKSDAVPDTLIKLMEYGEDDDDVDDSSEEPLP 602
>TC19138 weakly similar to UP|Q9LZJ3 (Q9LZJ3) Alpha
galactosyltransferase-like protein
(AT3g62720/F26K9_150), partial (12%)
Length = 458
Score = 29.6 bits (65), Expect = 0.080
Identities = 21/73 (28%), Positives = 30/73 (40%)
Frame = +1
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
+++Q+A R PPPP + P L L R A + +R +A
Sbjct: 199 AEQQNAGTVLRISPPPPAAARLAPRLPHLP---LPLPHRHHASRHHRSRQVRNPRAGPRR 369
Query: 92 KEPPPPPPVVAAP 104
PPP PP A+P
Sbjct: 370 DPPPPRPPRRASP 408
>TC9170 similar to UP|Q9FF36 (Q9FF36) Gb|AAF31027.1, partial (37%)
Length = 457
Score = 29.6 bits (65), Expect = 0.080
Identities = 19/65 (29%), Positives = 28/65 (42%), Gaps = 3/65 (4%)
Frame = +1
Query: 36 SARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQG---KAVNINK 92
S R RRP PP+ ++ +A S R+ + + R R+ G A I +
Sbjct: 154 SHRQLRRRPRHRPPRLRRPHAPQQLRANPRRSPLRRRRHRPRLVRARQHGFRSLARRIGR 333
Query: 93 EPPPP 97
PPPP
Sbjct: 334 NPPPP 348
Score = 28.5 bits (62), Expect = 0.18
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 44 PPPPPPKEKKDPNLSAAQAKVLA---SKKRKEAMKAEVARLREQGKAVNINKEPPPPPPV 100
PPPPPP P+ S A + LA +K A + A + + P P
Sbjct: 33 PPPPPPCLPISPSFSPASSSFLAAPFAKTSSSISSASTTLISSSATAPSPSSSPASPAST 212
Query: 101 VAAPPASE 108
++ +S+
Sbjct: 213 CSSAASSQ 236
Score = 23.1 bits (48), Expect = 7.4
Identities = 7/16 (43%), Positives = 10/16 (61%)
Frame = +3
Query: 91 NKEPPPPPPVVAAPPA 106
+ PPPPPP + P+
Sbjct: 24 HSSPPPPPPCLPISPS 71
>AV425102
Length = 426
Score = 29.6 bits (65), Expect = 0.080
Identities = 11/19 (57%), Positives = 13/19 (67%)
Frame = +2
Query: 42 RRPPPPPPKEKKDPNLSAA 60
RRPPPPPP P +SA+
Sbjct: 47 RRPPPPPPPPPPPPEISAS 103
Score = 24.6 bits (52), Expect = 2.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 92 KEPPPPPPVVAAPP 105
+ PPPPPP PP
Sbjct: 47 RRPPPPPPPPPPPP 88
Score = 23.5 bits (49), Expect(2) = 0.88
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 32 SDEQSARAAARRPPPPPPKE 51
SD R PPPPPP E
Sbjct: 32 SDFHCRRPPPPPPPPPPPPE 91
Score = 23.1 bits (48), Expect = 7.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 94 PPPPPPVVAA 103
PPPPPP ++A
Sbjct: 71 PPPPPPEISA 100
Score = 21.2 bits (43), Expect(2) = 0.88
Identities = 7/12 (58%), Positives = 9/12 (74%)
Frame = +2
Query: 94 PPPPPPVVAAPP 105
PPPPP + A+ P
Sbjct: 74 PPPPPEISAS*P 109
>BI417928
Length = 509
Score = 26.6 bits (57), Expect(2) = 0.091
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = +2
Query: 44 PPPPPPKEKKDPNLSAAQAK-----VLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
PPPPPP+ P L + + S K A KA + P P P
Sbjct: 206 PPPPPPRSSTPPPLRLSSSSPWPPFCPTSPPPKPTTPPTTA------KATTV-ASPLPTP 364
Query: 99 PVVAAPPAS 107
P +PP++
Sbjct: 365 PTTPSPPSA 391
Score = 22.7 bits (47), Expect = 9.7
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +2
Query: 91 NKEPPPPPPV 100
+++PPPPPP+
Sbjct: 59 HQQPPPPPPL 88
Score = 21.6 bits (44), Expect(2) = 0.091
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +2
Query: 42 RRPPPPPP 49
++PPPPPP
Sbjct: 62 QQPPPPPP 85
>TC12667 similar to PIR|D96525|D96525 protein T1N15.19 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;}, partial
(10%)
Length = 498
Score = 28.1 bits (61), Expect = 0.23
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 30 SWSDEQSARAAARRPPPPPPKEKK 53
S S ++ AA PPPPPP KK
Sbjct: 209 SHSHHSTSTAALASPPPPPPPPKK 280
Score = 27.7 bits (60), Expect = 0.30
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 36 SARAAARRPPPPPPKEKKDP 55
S A A PPPPPP +K P
Sbjct: 230 STAALASPPPPPPPPKKSHP 289
Score = 26.6 bits (57), Expect = 0.67
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 36 SARAAARRPPPPPPKEKKDP 55
+A A+ PPPPPPK+ P
Sbjct: 233 TAALASPPPPPPPPKKSHPP 292
Score = 24.3 bits (51), Expect = 3.3
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +2
Query: 94 PPPPPPVVAAPP 105
PPPPPP + PP
Sbjct: 257 PPPPPPKKSHPP 292
Score = 23.1 bits (48), Expect = 7.4
Identities = 10/24 (41%), Positives = 12/24 (49%)
Frame = +2
Query: 32 SDEQSARAAARRPPPPPPKEKKDP 55
S +A A+ PPPPP K P
Sbjct: 224 STSTAALASPPPPPPPPKKSHPPP 295
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,487,203
Number of Sequences: 28460
Number of extensions: 52060
Number of successful extensions: 3579
Number of sequences better than 10.0: 685
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2851
length of query: 108
length of database: 4,897,600
effective HSP length: 84
effective length of query: 24
effective length of database: 2,506,960
effective search space: 60167040
effective search space used: 60167040
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)
Medicago: description of AC124964.9