TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC119416.7 - phase: 0 /pseudo
         (447 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP038206                                                               77  8e-15
BP079927                                                               62  3e-10
AV408976                                                               42  2e-04
AV776899                                                               30  0.62
TC7952 similar to PIR|A45116|A45116 L-ascorbate peroxidase , cyt...    28  2.3
TC7951 similar to UP|Q43758 (Q43758) Ascorbate peroxidase  , com...    28  2.3
BP078466                                                               28  3.1
BP063610                                                               27  6.8
TC11531 similar to AAQ56832 (AAQ56832) At2g34040, partial (32%)        27  6.8

>BP038206 
          Length = 563

 Score = 76.6 bits (187), Expect = 8e-15
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
 Frame = -3

Query: 72  SSHGTTNLGKHLKVC--LKNPYRVVDKKQKTLA---------IGMGSEDDPNSVSFKLVD 120
           S +GT +L  H+  C  +K   R  DK Q  L          +G G+ D  NS       
Sbjct: 540 SKNGTNHLRNHVAKCV*MKIQTRGHDKGQAFLMPKASQGKQELGAGAYDADNS------- 382

Query: 121 FSQEKTRLALAKMIIIDELPFKHVENEGFKMFMGEAQPKFKIPSRVSVARDCLRLYFDEK 180
               K++LA A  II+ + P   V++ GF+ +    QP F++P+R ++ ++ +++Y  +K
Sbjct: 381 ----KSQLACA--IILHDYPLSIVDHIGFQRYSNSLQPLFQVPTRNTIKKEVIKIYEFQK 220

Query: 181 ETLKSVLSANNQMVSLTTDTWTS-IQNMNYMCVTAHYIDDEWVLKKKIL 228
             +  +L ++   V++T+D WTS  Q   Y  VT H ID  W L+ ++L
Sbjct: 219 TCVMKMLDSHEGRVAITSDMWTSNNQKRGYTTVTTHCIDSTWTLQSRVL 73


>BP079927 
          Length = 438

 Score = 61.6 bits (148), Expect = 3e-10
 Identities = 33/88 (37%), Positives = 44/88 (49%), Gaps = 14/88 (15%)
 Frame = +3

Query: 13  QGKDGEVTEAGAVT-----EVGAATAVSKQKKK---PQTCSKVWRHFNR------NKNLA 58
           QG + E++ A         EV  A    K+K     P+T + +W+HF R          A
Sbjct: 150 QGAETEISMADPAVLPPPPEVQGANPKKKRKPNASGPRTTTSIWKHFTRLPENEVQDPTA 329

Query: 59  VCKYCGKEYAANSSSHGTTNLGKHLKVC 86
            C YCGK Y  +S +HGTTNL  HLK+C
Sbjct: 330 ACNYCGKRYLCDSKTHGTTNLNTHLKIC 413


>AV408976 
          Length = 340

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 30/97 (30%), Positives = 45/97 (45%)
 Frame = +2

Query: 241 IGIALENCMKDWGIRSICCVTVDNASANNLAINYLNRGMRVWNGRTLFNGEYLHMRCCAH 300
           I  A+  C+ DW I         N + +  A+  L   + V N   L NG+ L   C A 
Sbjct: 50  ISHAVAVCLSDWNIEGRLFSITCNHALSESALGNLRSLLSVKNPLIL-NGQLLVGHCIAR 226

Query: 301 ILNLIVLDGLKDIDASVQRIRAACKFVKSSPSRLATF 337
            L+ +  D L  ++  V++IR + KFVK+S S    F
Sbjct: 227 TLSNVANDLLSAVEGIVKKIRDSVKFVKTSESHEEKF 337


>AV776899 
          Length = 396

 Score = 30.4 bits (67), Expect = 0.62
 Identities = 20/62 (32%), Positives = 28/62 (44%), Gaps = 7/62 (11%)
 Frame = +2

Query: 34  VSKQKKKPQTC-SKVWRHF------NRNKNLAVCKYCGKEYAANSSSHGTTNLGKHLKVC 86
           + K  K+P+   S VW+ F      +     A C  C  EY      +GT+ L +H KVC
Sbjct: 212 LEKGTKRPKALTSDVWQKFTIIGRGDDGIQRAKCNGCRSEYKCGGD-YGTSTLRRHAKVC 388

Query: 87  LK 88
            K
Sbjct: 389 TK 394


>TC7952 similar to PIR|A45116|A45116 L-ascorbate peroxidase , cytosolic
           [validated]                - garden pea {Pisum sativum;}
           , partial (62%)
          Length = 542

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 18/57 (31%), Positives = 27/57 (46%)
 Frame = -2

Query: 73  SHGTTNLGKHLKVCLKNPYRVVDKKQKTLAIGMGSEDDPNSVSFKLVDFSQEKTRLA 129
           S GTT+LG H+K   + P +   K+   L     SE  P  +   LV  +  + RL+
Sbjct: 247 SEGTTSLGLHIKGPSRVPCQTEHKRSAFLVSDEASELSPGLLDSLLVISADGRVRLS 77


>TC7951 similar to UP|Q43758 (Q43758) Ascorbate peroxidase  , complete
          Length = 1022

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 18/57 (31%), Positives = 27/57 (46%)
 Frame = -2

Query: 73  SHGTTNLGKHLKVCLKNPYRVVDKKQKTLAIGMGSEDDPNSVSFKLVDFSQEKTRLA 129
           S GTT+LG H+K   + P +   K+   L     SE  P  +   LV  +  + RL+
Sbjct: 241 SEGTTSLGLHIKGPSRVPCQTEHKRSAFLVSDEASELSPGLLDSLLVISADGRVRLS 71


>BP078466 
          Length = 530

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 12/22 (54%), Positives = 17/22 (76%)
 Frame = -1

Query: 128 LALAKMIIIDELPFKHVENEGF 149
           +AL+  II+DE PF+ VE +GF
Sbjct: 290 VALSIFIILDEQPFRVVEGQGF 225


>BP063610 
          Length = 461

 Score = 26.9 bits (58), Expect = 6.8
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 216 YIDDEWVLKKKILSFNLIADHKGE 239
           Y+ D WVL + + + NL+ +++GE
Sbjct: 183 YLHDNWVLHRDLKTSNLLLNNRGE 112


>TC11531 similar to AAQ56832 (AAQ56832) At2g34040, partial (32%)
          Length = 535

 Score = 26.9 bits (58), Expect = 6.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 206 NMNYMCVTAHYIDDEWVLKKKILSFNLIADHK 237
           N+ Y+C+T+   + + +  + +LSF+LI  HK
Sbjct: 149 NI*YLCLTSFQENGK*ICSEALLSFHLIQHHK 244


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.320    0.133    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,730,046
Number of Sequences: 28460
Number of extensions: 106533
Number of successful extensions: 502
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of query: 447
length of database: 4,897,600
effective HSP length: 93
effective length of query: 354
effective length of database: 2,250,820
effective search space: 796790280
effective search space used: 796790280
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)