BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.8 - phase: 0
(127 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC233295 similar to UP|Q7KVQ0 (Q7KVQ0) CG4038-PA, partial (6%) 57 3e-09
AW596916 51 2e-07
TC222844 weakly similar to UP|Q9FFW4 (Q9FFW4) Similarity to heat... 47 2e-06
AW756593 46 4e-06
CK606020 43 3e-05
TC231640 homologue to UP|Q918P0 (Q918P0) Latency associated anti... 41 2e-04
TC215201 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly prote... 40 2e-04
TC226613 similar to UP|Q8H0V8 (Q8H0V8) Spliceosome associated pr... 40 3e-04
AW203333 39 5e-04
TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1... 39 5e-04
BI699342 39 5e-04
TC233907 similar to UP|Q86NQ6 (Q86NQ6) RE01075p, partial (10%) 39 6e-04
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 39 6e-04
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 39 8e-04
BU965508 38 0.001
TC224116 38 0.001
TC213554 weakly similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protei... 38 0.001
TC230070 weakly similar to GB|AAB68216.1|1244771|SCU43703 Ypl146... 38 0.001
TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%) 38 0.001
TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%) 38 0.001
>TC233295 similar to UP|Q7KVQ0 (Q7KVQ0) CG4038-PA, partial (6%)
Length = 557
Score = 56.6 bits (135), Expect = 3e-09
Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +3
Query: 5 PTT--TDRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
PTT DRIS LPD ++ ILS LP KQ +T +LSKRW+PLW A+ D
Sbjct: 48 PTTGDDDRISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAVSVLD 197
Score = 39.7 bits (91), Expect = 4e-04
Identities = 24/55 (43%), Positives = 33/55 (59%)
Frame = +3
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSDSD 106
DRIS LP +L IL LPTKQ +T ILS RWR + + + + +DD+S +
Sbjct: 66 DRISHLPDVLLLQILSLLPTKQAVITGILSKRWRPLWPAV---SVLDFDDESSPE 221
>AW596916
Length = 455
Score = 50.8 bits (120), Expect = 2e-07
Identities = 20/42 (47%), Positives = 29/42 (68%)
Frame = +3
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPN 50
DR+SDLPD ++ HI+ ++ K T +LSKRWK LW+ + N
Sbjct: 264 DRLSDLPDFVLLHIMKFMSMKHAVQTCVLSKRWKELWKRLTN 389
Score = 28.1 bits (61), Expect = 1.1
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSD 104
DR+S LP VL I+ + K T +LS RW+ L K L +H D +D
Sbjct: 264 DRLSDLPDFVLLHIMKFMSMKHAVQTCVLSKRWKE-LWKRLTNLALHSSDFAD 419
>TC222844 weakly similar to UP|Q9FFW4 (Q9FFW4) Similarity to heat shock
transcription factor HSF30, partial (6%)
Length = 746
Score = 47.0 bits (110), Expect = 2e-06
Identities = 22/54 (40%), Positives = 33/54 (60%)
Frame = +1
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNADRISALPFEVL 62
DRIS LPD +++H+++++ K T +LSKRW L + + N S LP E L
Sbjct: 496 DRISALPDSLLFHMINFMDTKSAVQTCVLSKRWNDLSKCLTNLTFNSDLPSEGL 657
Score = 29.3 bits (64), Expect = 0.51
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRW 84
DRISALP +L ++ + TK T +LS RW
Sbjct: 496 DRISALPDSLLFHMINFMDTKSAVQTCVLSKRW 594
>AW756593
Length = 370
Score = 46.2 bits (108), Expect = 4e-06
Identities = 17/45 (37%), Positives = 29/45 (63%)
Frame = +3
Query: 4 PPTTTDRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAM 48
P D+IS+LPD I+ H++ ++ ++ T +LSKRW LW+ +
Sbjct: 48 PKDDRDKISELPDNILLHMMDFMDTREAVQTCVLSKRWNNLWKRL 182
>CK606020
Length = 340
Score = 43.1 bits (100), Expect = 3e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DD+ D ++EEEEEEEEEEEEEE++E
Sbjct: 172 DDEIDPSLDEEEEEEEEEEEEEEEEE 249
Score = 38.9 bits (89), Expect = 6e-04
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 95 NHIHYDDDSDSDMEEEEEEEEEEEEEEEQQ 124
N D D + EEEEEEEEEEEEEEE++
Sbjct: 169 NDDEIDPSLDEEEEEEEEEEEEEEEEEEEE 258
Score = 38.5 bits (88), Expect = 8e-04
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D++ + + EEEEEEEEEEEEE E++E
Sbjct: 196 DEEEEEEEEEEEEEEEEEEEEIEEEE 273
Score = 37.7 bits (86), Expect = 0.001
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
+++ + + EEEEEEEE EEEEEE++E V
Sbjct: 211 EEEEEEEEEEEEEEEEIEEEEEEEEEEV 294
Score = 37.0 bits (84), Expect = 0.002
Identities = 15/26 (57%), Positives = 22/26 (83%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEEEE EE++E
Sbjct: 199 EEEEEEEEEEEEEEEEEEEEIEEEEE 276
Score = 37.0 bits (84), Expect = 0.002
Identities = 15/26 (57%), Positives = 22/26 (83%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEE EEEEE++E
Sbjct: 208 EEEEEEEEEEEEEEEEEIEEEEEEEE 285
Score = 37.0 bits (84), Expect = 0.002
Identities = 15/26 (57%), Positives = 22/26 (83%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEE EEEE++E
Sbjct: 205 EEEEEEEEEEEEEEEEEEIEEEEEEE 282
Score = 37.0 bits (84), Expect = 0.002
Identities = 15/26 (57%), Positives = 22/26 (83%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEEE EEE++E
Sbjct: 202 EEEEEEEEEEEEEEEEEEEIEEEEEE 279
Score = 36.6 bits (83), Expect = 0.003
Identities = 15/28 (53%), Positives = 23/28 (81%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
+++ + ++EEEEEEEEEE EEE ++E V
Sbjct: 238 EEEEEEEIEEEEEEEEEEVEEEVEEEEV 321
Score = 36.2 bits (82), Expect = 0.004
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
+++ + + EEEE EEEEEEEEEE +E V
Sbjct: 223 EEEEEEEEEEEEIEEEEEEEEEEVEEEV 306
Score = 35.4 bits (80), Expect = 0.007
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEE EEEEEEEEE+ E
Sbjct: 220 EEEEEEEEEEEEEIEEEEEEEEEEVE 297
Score = 35.0 bits (79), Expect = 0.009
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
+D + D +EEEEEEEEEEEE++E
Sbjct: 169 NDDEIDPSLDEEEEEEEEEEEEEEE 243
Score = 32.7 bits (73), Expect = 0.046
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEE EEE +E
Sbjct: 235 EEEEEEEEIEEEEEEEEEEVEEEVEE 312
Score = 32.7 bits (73), Expect = 0.046
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + E EEEEEEEEEE EE+ E
Sbjct: 232 EEEEEEEEEIEEEEEEEEEEVEEEVE 309
Score = 31.2 bits (69), Expect = 0.13
Identities = 14/26 (53%), Positives = 19/26 (72%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + EEEEEEE EEE EEE+ E
Sbjct: 247 EEEEIEEEEEEEEEEVEEEVEEEEVE 324
Score = 29.3 bits (64), Expect = 0.51
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
++ + + EEEEE EEE EEEE + E V
Sbjct: 253 EEIEEEEEEEEEEVEEEVEEEEVEGEEV 336
Score = 27.7 bits (60), Expect = 1.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EE EEE EEEE E E+ E
Sbjct: 262 EEEEEEEEEEVEEEVEEEEVEGEEVE 339
Score = 26.2 bits (56), Expect = 4.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D +D E + +EEEEEEEE++E
Sbjct: 154 DSPVANDDEIDPSLDEEEEEEEEEEE 231
Score = 26.2 bits (56), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEE 121
E I +++ + + EEE EEEE E EE
Sbjct: 247 EEEEIEEEEEEEEEEVEEEVEEEEVEGEE 333
Score = 25.0 bits (53), Expect = 9.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 92 LETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
++ N + D ++ +E + +EEEEEEE++E
Sbjct: 127 IQFNPMSLPDSPVANDDEIDPSLDEEEEEEEEEE 228
>TC231640 homologue to UP|Q918P0 (Q918P0) Latency associated antigen, partial
(7%)
Length = 466
Score = 40.8 bits (94), Expect = 2e-04
Identities = 18/37 (48%), Positives = 26/37 (69%)
Frame = +1
Query: 89 NKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
N + +T + + + + EEEEEEEEEEEEEEE++E
Sbjct: 4 NVLSDTQEEEEEKEEEEEEEEEEEEEEEEEEEEEEKE 114
Score = 39.7 bits (91), Expect = 4e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 87 VLNKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
VL+ E +++ + + EEEEEEEEEEEEE+E++E
Sbjct: 7 VLSDTQEEEEEKEEEEEEEEEEEEEEEEEEEEEEKEEEE 123
Score = 38.5 bits (88), Expect = 8e-04
Identities = 15/26 (57%), Positives = 23/26 (87%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEE+EEEE++E
Sbjct: 55 EEEEEEEEEEEEEEEEEEKEEEEEEE 132
Score = 38.5 bits (88), Expect = 8e-04
Identities = 15/26 (57%), Positives = 23/26 (87%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEEE+EEE++E
Sbjct: 52 EEEEEEEEEEEEEEEEEEEKEEEEEE 129
Score = 38.5 bits (88), Expect = 8e-04
Identities = 15/26 (57%), Positives = 23/26 (87%)
Frame = +1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEEEE+EE++E
Sbjct: 49 EEEEEEEEEEEEEEEEEEEEKEEEEE 126
Score = 38.1 bits (87), Expect = 0.001
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 89 NKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
+ +L ++ + + EEEEEEEEEEEEEEE+++
Sbjct: 1 DNVLSDTQEEEEEKEEEEEEEEEEEEEEEEEEEEEEK 111
>TC215201 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly protein 1-like
protein 1, partial (55%)
Length = 904
Score = 40.4 bits (93), Expect = 2e-04
Identities = 15/33 (45%), Positives = 26/33 (78%)
Frame = +3
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
+ + + YDD+ + E+E+E+EEEEEEEEE+++
Sbjct: 501 DIDEVDYDDEEGDEDEDEDEDEEEEEEEEEEKK 599
Score = 30.4 bits (67), Expect = 0.23
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D+D D D EEEEEEEEEE++ + + +
Sbjct: 543 DEDEDED-EEEEEEEEEEKKGKSRSK 617
>TC226613 similar to UP|Q8H0V8 (Q8H0V8) Spliceosome associated protein-like
(At4g21660), partial (59%)
Length = 1844
Score = 40.0 bits (92), Expect = 3e-04
Identities = 17/20 (85%), Positives = 20/20 (100%)
Frame = +2
Query: 106 DMEEEEEEEEEEEEEEEQQE 125
D+EEEEEEEEEEEEEEE++E
Sbjct: 857 DLEEEEEEEEEEEEEEEEEE 916
Score = 39.3 bits (90), Expect = 5e-04
Identities = 17/28 (60%), Positives = 22/28 (77%)
Frame = +2
Query: 98 HYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
H+ D + + EEEEEEEEEEEEE E++E
Sbjct: 848 HWGDLEEEEEEEEEEEEEEEEEEMEEEE 931
Score = 35.8 bits (81), Expect = 0.005
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
+T H ++ + + EEEEEEEEEEE EEE+ E
Sbjct: 839 KTKHWGDLEEEEEEEEEEEEEEEEEEMEEEELE 937
Score = 31.2 bits (69), Expect = 0.13
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 88 LNKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEE 122
++K + +++ + + EEEEEEEE EEEE E
Sbjct: 833 VDKTKHWGDLEEEEEEEEEEEEEEEEEEMEEEELE 937
Score = 26.6 bits (57), Expect = 3.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 98 HYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
+Y+++ + + EEEEEEEEE++E
Sbjct: 815 NYEEEPVDKTKHWGDLEEEEEEEEEEEE 898
>AW203333
Length = 418
Score = 39.3 bits (90), Expect = 5e-04
Identities = 18/41 (43%), Positives = 23/41 (55%)
Frame = +1
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP 49
D IS LP I++ ILS +P + TS+LSK W W P
Sbjct: 85 DMISTLPKTILHDILSRMPEEDAVRTSVLSKSWAEAWSTYP 207
>TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(70%)
Length = 2075
Score = 39.3 bits (90), Expect = 5e-04
Identities = 15/26 (57%), Positives = 24/26 (91%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + ++EEEEEEEEE+EEEEE++E
Sbjct: 152 EEEVEEEVEEEEEEEEEDEEEEEEEE 229
Score = 38.5 bits (88), Expect = 8e-04
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
E +++ + + EEEEE+EEEEEEEEE++E
Sbjct: 143 EVEEEEVEEEVEEEEEEEEEDEEEEEEEEEEEE 241
Score = 37.7 bits (86), Expect = 0.001
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 92 LETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
+E + + + + + EEE+EEEEEEEEEEE++ V
Sbjct: 146 VEEEEVEEEVEEEEEEEEEDEEEEEEEEEEEEENDV 253
Score = 37.4 bits (85), Expect = 0.002
Identities = 15/27 (55%), Positives = 22/27 (80%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQEYV 127
++ + + EE+EEEEEEEEEEEE+ + V
Sbjct: 176 EEEEEEEEEDEEEEEEEEEEEEENDVV 256
Score = 35.4 bits (80), Expect = 0.007
Identities = 14/26 (53%), Positives = 22/26 (83%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
++ + ++EEE EEEEEEEEE+E++E
Sbjct: 140 EEVEEEEVEEEVEEEEEEEEEDEEEE 217
Score = 34.3 bits (77), Expect = 0.016
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
++ + ++EEEE EEE EEEEEE++E
Sbjct: 128 EEVEEEVEEEEVEEEVEEEEEEEEE 202
Score = 33.9 bits (76), Expect = 0.021
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
E + + + + EE EEEEEEEEE+EE++E
Sbjct: 122 EYEEVEEEVEEEEVEEEVEEEEEEEEEDEEEEE 220
Score = 32.7 bits (73), Expect = 0.046
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ D + EEEEEEEEEE + +QQ+
Sbjct: 191 EEEEDEEEEEEEEEEEEENDVVKQQQ 268
Score = 31.2 bits (69), Expect = 0.13
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEEEE + +Q+
Sbjct: 188 EEEEEDEEEEEEEEEEEEENDVVKQQ 265
Score = 30.4 bits (67), Expect = 0.23
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
++D + + EEEEEEEE + +++QQ+
Sbjct: 197 EEDEEEEEEEEEEEEENDVVKQQQQQ 274
Score = 30.0 bits (66), Expect = 0.30
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + EEEEEEEEE + ++QQ+
Sbjct: 194 EEEDEEEEEEEEEEEEENDVVKQQQQ 271
Score = 29.6 bits (65), Expect = 0.39
Identities = 12/39 (30%), Positives = 24/39 (60%)
Frame = +2
Query: 87 VLNKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
V ++ E +D+ + + EEEEEEE + ++++QQ+
Sbjct: 161 VEEEVEEEEEEEEEDEEEEEEEEEEEEENDVVKQQQQQQ 277
Score = 28.1 bits (61), Expect = 1.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
++ + EE EEE EEEE EEE +E
Sbjct: 107 ENPPQEYEEVEEEVEEEEVEEEVEE 181
Score = 28.1 bits (61), Expect = 1.1
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D++ + + EEEEEE + +++++QQ+
Sbjct: 203 DEEEEEEEEEEEEENDVVKQQQQQQQ 280
Score = 25.0 bits (53), Expect = 9.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 109 EEEEEEEEEEEEEEQQEYV 127
+E EE EEE EEEE +E V
Sbjct: 119 QEYEEVEEEVEEEEVEEEV 175
>BI699342
Length = 325
Score = 39.3 bits (90), Expect = 5e-04
Identities = 17/23 (73%), Positives = 22/23 (94%)
Frame = -1
Query: 103 SDSDMEEEEEEEEEEEEEEEQQE 125
S+++ EEEEEEEEEEEEEEE++E
Sbjct: 274 SNAEEEEEEEEEEEEEEEEEEEE 206
Score = 39.3 bits (90), Expect = 5e-04
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = -1
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
++ + + EEEEEEEEEEEEEEE++E
Sbjct: 265 EEEEEEEEEEEEEEEEEEEEEEEEE 191
Score = 38.9 bits (89), Expect = 6e-04
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = -1
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEYV 127
+++ + + EEEEEEEEEEEEEEE+++ +
Sbjct: 265 EEEEEEEEEEEEEEEEEEEEEEEEEKAI 182
Score = 38.5 bits (88), Expect = 8e-04
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -1
Query: 102 DSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + EEEEEEEEEEEEEEE++E
Sbjct: 271 NAEEEEEEEEEEEEEEEEEEEEEE 200
Score = 38.5 bits (88), Expect = 8e-04
Identities = 16/30 (53%), Positives = 24/30 (79%)
Frame = -1
Query: 94 TNHIHYDDDSDSDMEEEEEEEEEEEEEEEQ 123
T++ +++ + + EEEEEEEEEEEEEEE+
Sbjct: 277 TSNAEEEEEEEEEEEEEEEEEEEEEEEEEK 188
>TC233907 similar to UP|Q86NQ6 (Q86NQ6) RE01075p, partial (10%)
Length = 845
Score = 38.9 bits (89), Expect = 6e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 95 NHIHYDDDSDSDMEEEEEEEEEEEEEEEQQEY 126
+ I+ + + D +EEEEEEEEEEEEE + EY
Sbjct: 196 DEIYSTSEFEDDDDEEEEEEEEEEEEERRDEY 291
Score = 37.0 bits (84), Expect = 0.002
Identities = 16/35 (45%), Positives = 27/35 (76%)
Frame = +1
Query: 91 ILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
I+ T ++ + S S+ E++++EEEEEEEEEE++E
Sbjct: 172 IIATPTLYDEIYSTSEFEDDDDEEEEEEEEEEEEE 276
Score = 34.7 bits (78), Expect = 0.012
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 89 NKILETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQEY 126
++I T+ DDD EEEEEEEEEEEEE + +
Sbjct: 196 DEIYSTSEFEDDDD-----EEEEEEEEEEEEERRDEYF 294
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 38.9 bits (89), Expect = 6e-04
Identities = 15/26 (57%), Positives = 23/26 (87%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DDD+DSD + +++E+E+EE+EEEQ E
Sbjct: 482 DDDNDSDDDSDDDEDEDEEDEEEQGE 559
Score = 37.4 bits (85), Expect = 0.002
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEE 122
DDDSD D +E+EE+EEE+ EEE+
Sbjct: 500 DDDSDDDEDEDEEDEEEQGEEED 568
Score = 37.0 bits (84), Expect = 0.002
Identities = 13/26 (50%), Positives = 23/26 (88%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D+DSD D +++E+E+EE+EEE+ ++E
Sbjct: 488 DNDSDDDSDDDEDEDEEDEEEQGEEE 565
Score = 28.5 bits (62), Expect = 0.87
Identities = 8/25 (32%), Positives = 20/25 (80%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
DD++ D +EEE+++++E ++ + +E
Sbjct: 323 DDAEDDEDEEEDDDDDEGDDNDDEE 397
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 38.5 bits (88), Expect = 8e-04
Identities = 14/26 (53%), Positives = 23/26 (87%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DDD D+D EE++++ E+EEEEE+++E
Sbjct: 486 DDDDDNDNEEDDDDGEDEEEEEDEEE 563
Score = 36.6 bits (83), Expect = 0.003
Identities = 13/26 (50%), Positives = 23/26 (88%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DDD+D++ ++++ E+EEEEE+EE+ E
Sbjct: 492 DDDNDNEEDDDDGEDEEEEEDEEEDE 569
Score = 36.2 bits (82), Expect = 0.004
Identities = 15/24 (62%), Positives = 19/24 (78%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQ 123
+DD D + EEEEE+EEE+EEE Q
Sbjct: 513 EDDDDGEDEEEEEDEEEDEEETSQ 584
Score = 35.8 bits (81), Expect = 0.005
Identities = 14/26 (53%), Positives = 21/26 (79%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ D D E+EEEEE+EEE+EEE +
Sbjct: 507 NEEDDDDGEDEEEEEDEEEDEEETSQ 584
Score = 34.7 bits (78), Expect = 0.012
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
E N DDD D + EE++++ E+EEEEE +E
Sbjct: 462 EANGGGSDDDDDDNDNEEDDDDGEDEEEEEDEE 560
Score = 34.3 bits (77), Expect = 0.016
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEE 122
+ N DDD D EEEE+EEE+EEE +
Sbjct: 495 DDNDNEEDDDDGEDEEEEEDEEEDEEETSQ 584
>BU965508
Length = 447
Score = 38.1 bits (87), Expect = 0.001
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAM 48
D ISDLP II IL LP + TS+LS +W+ W ++
Sbjct: 296 DLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASI 415
Score = 30.8 bits (68), Expect = 0.17
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWR 85
D IS LP ++ IL LP + T+ILS +WR
Sbjct: 296 DLISDLPQSIIESILVQLPIRDAVRTSILSSKWR 397
>TC224116
Length = 520
Score = 38.1 bits (87), Expect = 0.001
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAM 48
D ISDLP II IL LP + TS+LS +W+ W ++
Sbjct: 287 DLISDLPQSIIESILVQLPIRDAVRTSILSSKWRYKWASI 406
Score = 30.8 bits (68), Expect = 0.17
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWR 85
D IS LP ++ IL LP + T+ILS +WR
Sbjct: 287 DLISDLPQSIIESILVQLPIRDAVRTSILSSKWR 388
>TC213554 weakly similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1,
partial (18%)
Length = 451
Score = 38.1 bits (87), Expect = 0.001
Identities = 14/26 (53%), Positives = 24/26 (91%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + ++EEEEEEEE+EE+EEE++E
Sbjct: 218 EEEVEEEVEEEEEEEEDEEDEEEEEE 295
Score = 36.6 bits (83), Expect = 0.003
Identities = 14/27 (51%), Positives = 23/27 (84%)
Frame = +2
Query: 99 YDDDSDSDMEEEEEEEEEEEEEEEQQE 125
Y+++ + ++EEEE EEE EEEEEE+++
Sbjct: 188 YEEEVEEEVEEEEVEEEVEEEEEEEED 268
Score = 35.8 bits (81), Expect = 0.005
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 93 ETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
E +++ + + EEEE+EE+EEEEEE+Q++
Sbjct: 209 EVEEEEVEEEVEEEEEEEEDEEDEEEEEEDQKD 307
Score = 33.9 bits (76), Expect = 0.021
Identities = 12/27 (44%), Positives = 22/27 (81%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEY 126
++ + + EEE+EE+EEEEEE+++ +Y
Sbjct: 233 EEVEEEEEEEEDEEDEEEEEEDQKDQY 313
Score = 32.7 bits (73), Expect = 0.046
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 92 LETNHIHYDDDSDSDMEEEEEEEEEEEEEEEQQ 124
+E + + + + + EE+EE+EEEEEE+++ Q
Sbjct: 212 VEEEEVEEEVEEEEEEEEDEEDEEEEEEDQKDQ 310
Score = 31.6 bits (70), Expect = 0.10
Identities = 10/26 (38%), Positives = 22/26 (84%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQEY 126
++ + + E+EE+EEEEEE++++Q ++
Sbjct: 242 EEEEEEEEDEEDEEEEEEDQKDQYQH 319
Score = 30.0 bits (66), Expect = 0.30
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +2
Query: 97 IHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
+ +++ + D E+EEEEEE+++++ + Q+
Sbjct: 239 VEEEEEEEEDEEDEEEEEEDQKDQYQHQQ 325
Score = 29.3 bits (64), Expect = 0.51
Identities = 9/26 (34%), Positives = 21/26 (80%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ D + EEEEEE+++++ + +QQ+
Sbjct: 254 EEEEDEEDEEEEEEDQKDQYQHQQQQ 331
Score = 28.5 bits (62), Expect = 0.87
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 101 DDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + EEE EEE EEEE EE+ E
Sbjct: 170 ENAAQEYEEEVEEEVEEEEVEEEVE 244
Score = 28.1 bits (61), Expect = 1.1
Identities = 8/26 (30%), Positives = 21/26 (80%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+++ + + +EEEEEE+++++ + QQ+
Sbjct: 251 EEEEEDEEDEEEEEEDQKDQYQHQQQ 328
Score = 27.7 bits (60), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 98 HYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
H ++ E EEE EEE EEEE ++E
Sbjct: 155 HQPKPENAAQEYEEEVEEEVEEEEVEEE 238
Score = 26.9 bits (58), Expect = 2.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 108 EEEEEEEEEEEEEEEQQEYV 127
+E EEE EEE EEEE +E V
Sbjct: 182 QEYEEEVEEEVEEEEVEEEV 241
>TC230070 weakly similar to GB|AAB68216.1|1244771|SCU43703 Ypl146cp
{Saccharomyces cerevisiae;} , partial (5%)
Length = 1276
Score = 37.7 bits (86), Expect = 0.001
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 103 SDSDMEEEEEEEEEEEEEEEQQ 124
+D D EEEEEEEEEEEEEE+++
Sbjct: 113 TDEDNEEEEEEEEEEEEEEDRE 178
Score = 35.4 bits (80), Expect = 0.007
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 102 DSDSDMEEEEEEEEEEEEEEE 122
D D++ EEEEEEEEEEEE+ E
Sbjct: 116 DEDNEEEEEEEEEEEEEEDRE 178
Score = 35.4 bits (80), Expect = 0.007
Identities = 16/24 (66%), Positives = 19/24 (78%)
Frame = +2
Query: 103 SDSDMEEEEEEEEEEEEEEEQQEY 126
S + EEEEEEEEEEEEEE +E+
Sbjct: 110 STDEDNEEEEEEEEEEEEEEDREW 181
Score = 34.3 bits (77), Expect = 0.016
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 97 IHYDDDSDSDMEEEEEEEEEEEEEEE 122
I D+D++ + EEEEEEEEEE+ E E
Sbjct: 107 ISTDEDNEEEEEEEEEEEEEEDREWE 184
Score = 30.0 bits (66), Expect = 0.30
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQEY 126
+D+ + + EEEEEEEEE+ E E Y
Sbjct: 119 EDNEEEEEEEEEEEEEEDREWELADVY 199
>TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%)
Length = 672
Score = 37.7 bits (86), Expect = 0.001
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DD+ D D+EE+++EEEEE+E+++ E
Sbjct: 213 DDEDDEDIEEDDDEEEEEDEDDDDDE 290
Score = 33.5 bits (75), Expect = 0.027
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D+D + D +EEEEE+E+++++E+ +E
Sbjct: 225 DEDIEEDDDEEEEEDEDDDDDEDDEE 302
Score = 31.6 bits (70), Expect = 0.10
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+DD D + EE+++EEEEE+E++ +
Sbjct: 210 EDDEDDEDIEEDDDEEEEEDEDDDDD 287
Score = 29.6 bits (65), Expect = 0.39
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 97 IHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
I DDD + + +E+++++E++EEE + ++
Sbjct: 234 IEEDDDEEEEEDEDDDDDEDDEEESKTKK 320
Score = 26.6 bits (57), Expect = 3.3
Identities = 7/26 (26%), Positives = 21/26 (79%)
Frame = +3
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DD+ + + E+++++E++EEE + +++
Sbjct: 246 DDEEEEEDEDDDDDEDDEEESKTKKK 323
>TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%)
Length = 1495
Score = 37.7 bits (86), Expect = 0.001
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DD+ D D+EE+++EEEEE+E+++ E
Sbjct: 1046 DDEDDEDIEEDDDEEEEEDEDDDDDE 1123
Score = 33.5 bits (75), Expect = 0.027
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
D+D + D +EEEEE+E+++++E+ +E
Sbjct: 1058 DEDIEEDDDEEEEEDEDDDDDEDDEE 1135
Score = 31.6 bits (70), Expect = 0.10
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
+DD D + EE+++EEEEE+E++ +
Sbjct: 1043 EDDEDDEDIEEDDDEEEEEDEDDDDD 1120
Score = 29.6 bits (65), Expect = 0.39
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +2
Query: 97 IHYDDDSDSDMEEEEEEEEEEEEEEEQQE 125
I DDD + + +E+++++E++EEE + ++
Sbjct: 1067 IEEDDDEEEEEDEDDDDDEDDEEESKTKK 1153
Score = 26.6 bits (57), Expect = 3.3
Identities = 7/26 (26%), Positives = 21/26 (79%)
Frame = +2
Query: 100 DDDSDSDMEEEEEEEEEEEEEEEQQE 125
DD+ + + E+++++E++EEE + +++
Sbjct: 1079 DDEEEEEDEDDDDDEDDEEESKTKKK 1156
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,073,668
Number of Sequences: 63676
Number of extensions: 116520
Number of successful extensions: 4958
Number of sequences better than 10.0: 409
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3057
length of query: 127
length of database: 12,639,632
effective HSP length: 86
effective length of query: 41
effective length of database: 7,163,496
effective search space: 293703336
effective search space used: 293703336
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 53 (25.0 bits)
Medicago: description of AC149206.8