BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148487.1 - phase: 1
(63 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BI701081 similar to GP|22759721|dbj| protease inhibitor 1 {Zinni... 107 1e-24
TC214712 similar to UP|Q8LNY1 (Q8LNY1) Protease inhibitor 1 (Fra... 107 1e-24
TC214723 similar to UP|Q8LNY1 (Q8LNY1) Protease inhibitor 1 (Fra... 106 3e-24
TC225653 similar to UP|Q8LNY0 (Q8LNY0) Protease inhibitor 2 (Fra... 102 5e-23
TC225654 weakly similar to UP|BGIA_MOMCH (P24076) Glu S.griseus ... 92 5e-20
TC225652 similar to UP|Q6YEY6 (Q6YEY6) Protease inhibitor, parti... 92 5e-20
TC232129 weakly similar to PDB|1MIT.0|1431715|1MIT Recombinant C... 74 1e-14
TC211488 similar to UP|ICI1_PHAAN (P16064) Subtilisin inhibitor ... 47 1e-06
AW152878 45 4e-06
AI966533 weakly similar to GP|26224744|gb| type I proteinase inh... 44 2e-05
TC222194 similar to UP|Q8S9K1 (Q8S9K1) At1g23880/T23E23_8, parti... 29 0.55
TC207722 homologue to UP|Q43466 (Q43466) Protein kinase 3 , part... 28 1.2
TC203328 homologue to UP|Q6L3T8 (Q6L3T8) Ribosomal protein L34e ... 26 3.6
CD403492 homologue to SP|P14226|PSBO_ Oxygen-evolving enhancer p... 26 3.6
TC219999 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (5%) 26 4.7
TC216916 similar to UP|Q9ARE3 (Q9ARE3) ZF-HD homeobox protein, p... 25 7.9
>BI701081 similar to GP|22759721|dbj| protease inhibitor 1 {Zinnia elegans},
partial (76%)
Length = 422
Score = 107 bits (267), Expect = 1e-24
Identities = 51/63 (80%), Positives = 56/63 (87%)
Frame = +2
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGV+G VAEATI+RENPLVDAIIVPEG+ V DFRCDRVWVWI+KD IV +VP
Sbjct: 65 KSSWPELVGVQGTVAEATIERENPLVDAIIVPEGNMVITDFRCDRVWVWIDKDGIVKEVP 244
Query: 61 TIG 63
IG
Sbjct: 245 HIG 253
>TC214712 similar to UP|Q8LNY1 (Q8LNY1) Protease inhibitor 1 (Fragment),
partial (76%)
Length = 502
Score = 107 bits (267), Expect = 1e-24
Identities = 51/63 (80%), Positives = 56/63 (87%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGV+G VAEATI+RENPLVDAIIVPEG+ V DFRCDRVWVWI+KD IV +VP
Sbjct: 112 KSSWPELVGVQGTVAEATIERENPLVDAIIVPEGNMVITDFRCDRVWVWIDKDGIVKEVP 291
Query: 61 TIG 63
IG
Sbjct: 292 HIG 300
>TC214723 similar to UP|Q8LNY1 (Q8LNY1) Protease inhibitor 1 (Fragment),
partial (91%)
Length = 447
Score = 106 bits (264), Expect = 3e-24
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGV+G VAEATI+RENPLV+AIIVPEG+ V D+RCDRVWVWINKD IV +VP
Sbjct: 100 KSSWPELVGVQGTVAEATIERENPLVNAIIVPEGNRVITDYRCDRVWVWINKDGIVKEVP 279
Query: 61 TIG 63
IG
Sbjct: 280 HIG 288
>TC225653 similar to UP|Q8LNY0 (Q8LNY0) Protease inhibitor 2 (Fragment),
partial (90%)
Length = 559
Score = 102 bits (253), Expect = 5e-23
Identities = 49/63 (77%), Positives = 53/63 (83%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGVEG VA ATI+RENPLVDA V +G+ V DFRCDRVWVW+ KD IVYQVP
Sbjct: 73 KSSWPELVGVEGTVAVATIERENPLVDANTVLKGTIVTPDFRCDRVWVWVTKDGIVYQVP 252
Query: 61 TIG 63
TIG
Sbjct: 253 TIG 261
>TC225654 weakly similar to UP|BGIA_MOMCH (P24076) Glu S.griseus protease
inhibitor (BGIA), partial (94%)
Length = 418
Score = 92.0 bits (227), Expect = 5e-20
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGVEG VA ATI+RENPLVDA V +GS V DFRCDRV VW+ K IVYQ P
Sbjct: 148 KSSWPELVGVEGTVAVATIERENPLVDANTVLKGSIVTADFRCDRVRVWVTKHGIVYQAP 327
Query: 61 TIG 63
IG
Sbjct: 328 RIG 336
>TC225652 similar to UP|Q6YEY6 (Q6YEY6) Protease inhibitor, partial (89%)
Length = 585
Score = 92.0 bits (227), Expect = 5e-20
Identities = 46/63 (73%), Positives = 49/63 (77%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPELVGVEG VA ATI+RENPLVDA V +GS V DFRCDRV VW+ K IVYQ P
Sbjct: 79 KSSWPELVGVEGTVAVATIERENPLVDANTVLKGSIVTADFRCDRVRVWVTKHGIVYQAP 258
Query: 61 TIG 63
IG
Sbjct: 259 RIG 267
>TC232129 weakly similar to PDB|1MIT.0|1431715|1MIT Recombinant Cucurbita
Maxima Trypsin Inhibitor V (Rcmti-V) (Nmr, Minimized
Average Structure). {Cucurbita maxima;} , partial (96%)
Length = 531
Score = 74.3 bits (181), Expect = 1e-14
Identities = 36/63 (57%), Positives = 44/63 (69%)
Frame = +1
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
KSSWPE+VG G VA I+REN V A +V EGS V DF C+RVWVW++K +V +VP
Sbjct: 76 KSSWPEVVGTNGVVAVEKIERENDNVRARLVGEGSMVTMDFWCNRVWVWVDKIGVVTRVP 255
Query: 61 TIG 63
IG
Sbjct: 256 KIG 264
>TC211488 similar to UP|ICI1_PHAAN (P16064) Subtilisin inhibitor I (ASI-I)
[Contains: Subtilisin inhibitor II (ASI-II)], partial
(88%)
Length = 681
Score = 47.4 bits (111), Expect = 1e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +2
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEIVYQVP 60
K+SWPELVGV + AE I+ E + +VP G V DF+ RV +++++ V + P
Sbjct: 137 KTSWPELVGVTAEEAEKKIKEEMGGAEIQVVPPGYFVTADFKPKRVRLYVDESNKVTRAP 316
Query: 61 TIG 63
IG
Sbjct: 317 GIG 325
>AW152878
Length = 309
Score = 44.7 bits (104), Expect(2) = 4e-06
Identities = 24/35 (68%), Positives = 27/35 (76%)
Frame = +3
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGS 35
KSSWP+LVGV+ VA AT RENPLVDA V +GS
Sbjct: 15 KSSWPKLVGVDRTVA*ATD*RENPLVDADTVLKGS 119
Score = 20.8 bits (42), Expect(2) = 4e-06
Identities = 8/23 (34%), Positives = 12/23 (51%)
Frame = +1
Query: 37 VPFDFRCDRVWVWINKDEIVYQV 59
+P CD V VW+ IV ++
Sbjct: 124 LPLILTCDLVRVWVTNHGIVIRL 192
>AI966533 weakly similar to GP|26224744|gb| type I proteinase
inhibitor-like protein {Citrus x paradisi}, partial
(29%)
Length = 193
Score = 43.9 bits (102), Expect = 2e-05
Identities = 23/47 (48%), Positives = 26/47 (54%)
Frame = +2
Query: 1 KSSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVW 47
KSSWPELVGVEG VA + E+P V V G+ V F C W
Sbjct: 14 KSSWPELVGVEGTVAXXXLASEHPFVHPPTVLNGTIVTPRFPCG*PW 154
>TC222194 similar to UP|Q8S9K1 (Q8S9K1) At1g23880/T23E23_8, partial (26%)
Length = 632
Score = 28.9 bits (63), Expect = 0.55
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = -3
Query: 2 SSWPELVGVEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWIN 51
+SW + + + + A++ +NP +I +P G+ +P+ W WI+
Sbjct: 192 ASWDDTIVPSLRCSNASM*PKNPAPTSIAIPSGNPLPY**AQSSKWSWIS 43
>TC207722 homologue to UP|Q43466 (Q43466) Protein kinase 3 , partial (9%)
Length = 589
Score = 27.7 bits (60), Expect = 1.2
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 3 SWPELVG--VEGKVAEATIQRENPLVDAIIVPEGSSVPFDFRCDRVWVWINKDEI 55
SW +L+G V + + I + ++D++I+ + RC ++W+WI K E+
Sbjct: 574 SWHKLLGLLVPHEPSHPQIP-SSQILDSLILIHNQIPRLNQRCYQLWLWITKKEV 413
>TC203328 homologue to UP|Q6L3T8 (Q6L3T8) Ribosomal protein L34e (60S
ribosomal protein L34), complete
Length = 606
Score = 26.2 bits (56), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 20 QRENPLVDAIIVPEGSSVPF 39
Q+ N L+ A ++P GSS+PF
Sbjct: 445 QQLNSLMPAFLLPSGSSIPF 386
>CD403492 homologue to SP|P14226|PSBO_ Oxygen-evolving enhancer protein 1
chloroplast precursor (OEE1), partial (21%)
Length = 674
Score = 26.2 bits (56), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 20 QRENPLVDAIIVPEGSSVPF 39
Q+ N L+ A ++P GSS+PF
Sbjct: 540 QQLNSLMPAFLLPSGSSIPF 599
>TC219999 weakly similar to UP|Q7T9Y7 (Q7T9Y7) Odv-e66, partial (5%)
Length = 641
Score = 25.8 bits (55), Expect = 4.7
Identities = 10/28 (35%), Positives = 15/28 (52%)
Frame = +3
Query: 32 PEGSSVPFDFRCDRVWVWINKDEIVYQV 59
P S+ F CD VWVW+ + I+ +
Sbjct: 345 PLFGSIVVVFGCDCVWVWVAIEMIIVMI 428
>TC216916 similar to UP|Q9ARE3 (Q9ARE3) ZF-HD homeobox protein, partial (50%)
Length = 1604
Score = 25.0 bits (53), Expect = 7.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 20 QRENPLVDAIIVPEGSSVPFDFRCDRVWVWI 50
+ E+PLV +VP S F R+W+W+
Sbjct: 1282 EEEDPLVPPPLVPLSFSYSFTSWEARLWLWL 1190
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.139 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,205,946
Number of Sequences: 63676
Number of extensions: 32798
Number of successful extensions: 183
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of query: 63
length of database: 12,639,632
effective HSP length: 39
effective length of query: 24
effective length of database: 10,156,268
effective search space: 243750432
effective search space used: 243750432
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)
Medicago: description of AC148487.1