BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146589.2 + phase: 0
(277 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC210819 similar to UP|Q9SJX3 (Q9SJX3) Ethylene reponse factor-l... 188 2e-48
TC208572 similar to UP|Q8LDC8 (Q8LDC8) Ethylene response factor ... 115 1e-32
BM143895 133 8e-32
TC208573 similar to UP|Q8GZE9 (Q8GZE9) Ethylene responsive eleme... 132 1e-31
TC231305 similar to UP|Q8LDC8 (Q8LDC8) Ethylene response factor ... 129 1e-30
BG726262 similar to PIR|T03927|T039 DNA binding protein S25-XP1 ... 114 6e-26
AW348322 similar to GP|21554205|gb| ethylene response factor ERF... 113 1e-25
TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive eleme... 112 2e-25
TC204739 similar to UP|Q40478 (Q40478) Ethylene-responsive eleme... 107 8e-24
TC222225 similar to UP|Q9LSX0 (Q9LSX0) Nicotiana EREBP-3 like, p... 100 6e-22
TC221985 similar to UP|PTI5_LYCES (O04681) Pathogenesis-related ... 100 7e-22
BQ080756 100 7e-22
TC215373 similar to UP|O23591 (O23591) EREBP-4 like protein, par... 100 7e-22
TC232915 similar to UP|Q9M4Y9 (Q9M4Y9) AP2-related transcription... 100 9e-22
TC208703 similar to UP|Q84XB0 (Q84XB0) Ethylene response factor ... 100 9e-22
TC228657 similar to GB|BAA97157.1|8809606|AB018117 ethylene resp... 99 2e-21
TC229025 UP|Q8LLR3 (Q8LLR3) Ethylene-responsive element binding ... 99 2e-21
TC215374 similar to UP|Q9LW48 (Q9LW48) Ethylene-responsive eleme... 97 8e-21
TC219209 similar to GB|BAA95736.1|7939533|AB025608 Nicotiana ERE... 96 2e-20
BM178875 similar to GP|7939533|dbj| Nicotiana EREBP-3-like prote... 95 4e-20
>TC210819 similar to UP|Q9SJX3 (Q9SJX3) Ethylene reponse factor-like AP2
domain transcription factor, partial (41%)
Length = 958
Score = 188 bits (478), Expect = 2e-48
Identities = 123/236 (52%), Positives = 149/236 (63%), Gaps = 5/236 (2%)
Frame = +1
Query: 47 SQSQTKESLLLPLSLYAESNSSFPLLSN---GSLEVSYNNTTIYTQVIKETETSLSLPSK 103
SQSQ KES S SNSS L+S+ LEVS +N T + +KET S
Sbjct: 256 SQSQIKES-----SSSDYSNSSGSLVSSTESSQLEVS-SNLTHASHQLKETHASPQPQPP 417
Query: 104 KNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNT 163
K NK +KR RGVRRRPWGKFAAEIRDSTR G RVW+GTF+T
Sbjct: 418 KETNK------------------DKRPFRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDT 543
Query: 164 EEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINSEP--LEEGTSPVLAIKRKIK 221
E AALAYDQAA S +GS+AVLNFPE+VV++SLK+M N++P LE+G+SPVLA+KRK
Sbjct: 544 AEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMQSNNKPISLEDGSSPVLALKRK-- 717
Query: 222 REHIARKSSNEVSKKKIKIDHNGDRTKRETNTKSKHVFVFEDLGAEYLEQLLSLTS 277
H R+ S +KK K DH + + N S++V V EDLG+EYLEQLLSLTS
Sbjct: 718 --HTMRRKSKATNKKN-KRDHGME--SQNVNIISQNVLVLEDLGSEYLEQLLSLTS 870
>TC208572 similar to UP|Q8LDC8 (Q8LDC8) Ethylene response factor ERF1,
partial (49%)
Length = 733
Score = 115 bits (287), Expect(2) = 1e-32
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = +3
Query: 128 KRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNF 187
K+ RGVRRRPWGKFAAEIRDSTR G RVWLGTF++ E AALAYDQAAFS +GS A+LNF
Sbjct: 267 KKSYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNF 446
Query: 188 PEDVVKDSLKEM 199
P ++V++SLKEM
Sbjct: 447 PVEIVRESLKEM 482
Score = 42.0 bits (97), Expect(2) = 1e-32
Identities = 30/67 (44%), Positives = 40/67 (58%)
Frame = +1
Query: 207 EEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRTKRETNTKSKHVFVFEDLGA 266
EEG SPV+A+KRK H R+ KI + N + +K +++T V VFEDLG
Sbjct: 508 EEGCSPVVALKRK----HSLRR--------KISVKKNNN-SKLQSSTVDNAV-VFEDLGP 645
Query: 267 EYLEQLL 273
+YLEQLL
Sbjct: 646 DYLEQLL 666
>BM143895
Length = 421
Score = 133 bits (335), Expect = 8e-32
Identities = 79/143 (55%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVRRRPWGKFAAEIRDSTR G RVWLGTF+T E AALAYDQAA +GS+AVLNFP ++
Sbjct: 63 RGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAALVMRGSMAVLNFPAEI 242
Query: 192 VKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRTKRET 251
V+ SL+ M +EG+SPVL +K KR + RKS ET
Sbjct: 243 VRQSLRNME-QYGSFQEGSSPVLELK---KRHSMKRKS--------------------ET 350
Query: 252 NTKSKH-VFVFEDLGAEYLEQLL 273
H V V EDLGAEYLE LL
Sbjct: 351 KKHQLHDVMVLEDLGAEYLEHLL 419
>TC208573 similar to UP|Q8GZE9 (Q8GZE9) Ethylene responsive element binding
protein, partial (41%)
Length = 658
Score = 132 bits (333), Expect = 1e-31
Identities = 69/112 (61%), Positives = 86/112 (76%), Gaps = 4/112 (3%)
Frame = +2
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVRRRPWGKFAAEIRDSTR G RVWLGTF++ E AALAYDQAAFS +GS A+LNFP ++
Sbjct: 302 RGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPAEI 481
Query: 192 VKDSLKEM--AINSEPLEEGTSPVLAIKRK--IKREHIARKSSNEVSKKKIK 239
V++SLKEM A + EEG SPV+A+KRK ++R+ RK N + K++
Sbjct: 482 VRESLKEMNYAHDDSNNEEGCSPVVALKRKHSLRRKINVRKKKNNNNNSKLQ 637
>TC231305 similar to UP|Q8LDC8 (Q8LDC8) Ethylene response factor ERF1,
partial (45%)
Length = 856
Score = 129 bits (325), Expect = 1e-30
Identities = 76/142 (53%), Positives = 89/142 (62%)
Frame = +1
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVRRRPWGKFAAEIRDSTR G RVWLGTF+ E AALAYDQAAFS +GS AVLNFP +
Sbjct: 175 RGVRRRPWGKFAAEIRDSTRHGVRVWLGTFDNAEAAALAYDQAAFSMRGSGAVLNFPVEK 354
Query: 192 VKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRTKRET 251
VK+SL++M + +G SPV+A+KR R +A K
Sbjct: 355 VKESLRDMKL------DGCSPVVALKR---RHSLAAK----------------------- 438
Query: 252 NTKSKHVFVFEDLGAEYLEQLL 273
K + V VF DLGA+YLE LL
Sbjct: 439 -RKKEDVLVFHDLGADYLEHLL 501
>BG726262 similar to PIR|T03927|T039 DNA binding protein S25-XP1 - common
tobacco, partial (20%)
Length = 381
Score = 114 bits (284), Expect = 6e-26
Identities = 76/143 (53%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
Frame = +2
Query: 47 SQSQTKESLLLPLSLYAESNSSFPLLSNGS-LEVSYNNTTIYTQVIKETETSLSLPSKKN 105
SQS+ KES S SNSS L+S S LEVS N T Q+ ET S P + N
Sbjct: 32 SQSRIKES-----SSSDYSNSSGSLVSTESQLEVSSNLTHASHQL--ETHASPQPPKEGN 190
Query: 106 KNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEE 165
K+K R RGVRRRPWGKFAAEIRDSTR G RVW+GTF+T E
Sbjct: 191 KDK--------------------RPFRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAE 310
Query: 166 EAALAYDQAAFSAKGSLAVLNFP 188
AALAYDQAA S +GS+AVLNFP
Sbjct: 311 AAALAYDQAALSTRGSMAVLNFP 379
>AW348322 similar to GP|21554205|gb| ethylene response factor ERF1
{Arabidopsis thaliana}, partial (34%)
Length = 497
Score = 113 bits (282), Expect = 1e-25
Identities = 62/104 (59%), Positives = 74/104 (70%)
Frame = +3
Query: 125 ESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAV 184
++ K+ GVRRRPWG+FAAEIRD+TRKG RVWLGTF++ EEAALAYDQAAFS S AV
Sbjct: 201 KTKKKSYIGVRRRPWGRFAAEIRDTTRKGIRVWLGTFDSAEEAALAYDQAAFSMXXSXAV 380
Query: 185 LNFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARK 228
LNFP VK+SL+EM N SP L +K +R +I RK
Sbjct: 381 LNFPVKXVKESLQEM--NYSGCSRRCSPALELK---ERHNIRRK 497
>TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive element binding
protein, partial (26%)
Length = 1370
Score = 112 bits (280), Expect = 2e-25
Identities = 70/183 (38%), Positives = 103/183 (56%)
Frame = +1
Query: 66 NSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKE 125
N + P +++G L + + TT T I T N N+ +SS +S
Sbjct: 382 NITIPSITSG-LATAMSQTTATTTTIATT--------MYNNNQVSSSSFSSD---ETNNT 525
Query: 126 SNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVL 185
+ + RGVRRRPWGK+AAEIRD RKG+RVWLGTF+T EAA AYD+AAF +GS A+L
Sbjct: 526 KDDKHYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAIL 705
Query: 186 NFPEDVVKDSLKEMAINSEPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGD 245
NFP ++ D KE + +S +S V+ + K +RE + + +N +K + ++N +
Sbjct: 706 NFPLEIGSDQSKEESSSSSSSVSSSSIVIKVGVKREREEESERKNN---YEKSEFNNNSN 876
Query: 246 RTK 248
K
Sbjct: 877 SNK 885
>TC204739 similar to UP|Q40478 (Q40478) Ethylene-responsive element binding
protein, partial (27%)
Length = 1307
Score = 107 bits (266), Expect = 8e-24
Identities = 69/175 (39%), Positives = 95/175 (53%)
Frame = +2
Query: 84 TTIYTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNKRVLRGVRRRPWGKFA 143
T+ T + +T T+ ++ + N + TSS S IKE+ RGVRRRPWGK+A
Sbjct: 377 TSGLTTTMSQTTTTTTIATTMYNNNQVTSS---SDETNNIKENKH--YRGVRRRPWGKYA 541
Query: 144 AEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINS 203
AEIRD RKG+RVWLGTF+T EAA AYD+AAF +GS A+LNFP ++ +
Sbjct: 542 AEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEIGES--------- 694
Query: 204 EPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKKIKIDHNGDRTKRETNTKSKHV 258
EE S IK +KRE SN K + ++N ++ ++ K V
Sbjct: 695 ---EESVSS--CIKVGVKREREEESKSNNYEKSEFNNNNNSNKHVKKEECSPKAV 844
>TC222225 similar to UP|Q9LSX0 (Q9LSX0) Nicotiana EREBP-3 like, partial (53%)
Length = 569
Score = 100 bits (250), Expect = 6e-22
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -1
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPED 190
RGVRRRPWGKFAAEIRDSTR+G RVWLGTFNT EEAA AYD+AA++ +G A+LNFP++
Sbjct: 281 RGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGPFAILNFPDE 105
>TC221985 similar to UP|PTI5_LYCES (O04681) Pathogenesis-related genes
transcriptional activator PTI5, partial (39%)
Length = 532
Score = 100 bits (249), Expect = 7e-22
Identities = 45/61 (73%), Positives = 53/61 (86%)
Frame = +3
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVRRRPWGK+AAEIRDS R GAR+WLGTF T EEAA+AYD+AAF +GS A+LNFP ++
Sbjct: 3 RGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAEI 182
Query: 192 V 192
V
Sbjct: 183 V 185
>BQ080756
Length = 428
Score = 100 bits (249), Expect = 7e-22
Identities = 71/157 (45%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Frame = +3
Query: 37 FNGDINFKKD----------SQSQTKESLLLPLSLYAESNSSFPLLSNGSLEVSYNNTTI 86
F+ D NF D SQSQTKE+ + SN S + S EVS N T
Sbjct: 39 FSWDYNFVLDDIFNNLSDNSSQSQTKETS-------SASNVSSCIGSVELQEVSSNTTY- 194
Query: 87 YTQVIKETETSLSLPSKKNKNKKKTSSLASSLPLPAIKESNK-RVLRGVRRRPWGKFAAE 145
K KK S PLP+ + + + R+ RGVR+RPWGKFAAE
Sbjct: 195 -------------------KEVKKVRPPPPSPPLPSQQVAKEPRMYRGVRKRPWGKFAAE 317
Query: 146 IRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSL 182
IRDSTR G RVW+GTF+T E AALAYDQAAFS +GSL
Sbjct: 318 IRDSTRNGVRVWIGTFDTAEAAALAYDQAAFSTRGSL 428
>TC215373 similar to UP|O23591 (O23591) EREBP-4 like protein, partial (16%)
Length = 1057
Score = 100 bits (249), Expect = 7e-22
Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Frame = +1
Query: 47 SQSQTKESLLLPLSLY----AESNSSFPLLSNGSLEVSYNNTTIYTQVIKETETSLSL-P 101
S+S ES + L+ Y E FPL S + T T + E + + P
Sbjct: 208 SESSNSESSSISLNHYFTDLLEPEIEFPLFEFDSKPQVIDLETPKTLISAEKKPQFNRKP 387
Query: 102 SKKNKNKKKTSSLASSLPLPAIKESN--KRVLRGVRRRPWGKFAAEIRDSTRKGARVWLG 159
S KKT + P A E+ K+ RGVR+RPWGKFAAEIRD ++G+RVWLG
Sbjct: 388 SLLIAVPKKTEWIQFGNPEVAAPENQPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLG 567
Query: 160 TFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV--VKDSLKEMAINSE---PLEEGTSPVL 214
TF+T EAA AYD+AAF +GS A+LNFP +V +++ A++ E EE V
Sbjct: 568 TFDTAIEAAKAYDRAAFRLRGSKAILNFPLEVNTAAETVSVAAVDVERKRRREEEEVVVE 747
Query: 215 AIKRKIKREHI 225
+K +K+E I
Sbjct: 748 DVKAVVKKEKI 780
>TC232915 similar to UP|Q9M4Y9 (Q9M4Y9) AP2-related transcription factor
(Ethylene responsive protein), partial (57%)
Length = 958
Score = 100 bits (248), Expect = 9e-22
Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Frame = +1
Query: 119 PLPAIKESNKRVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSA 178
P PA+ + + RGVR+RPWGKFAAEIRD + GARVWLGTF T E+AALAYD+AA+
Sbjct: 340 PAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRM 519
Query: 179 KGSLAVLNFPEDVVKDSLKEMAINS-EPLEEGTSPVLAIKRKIKREHIARKSSNEVSKKK 237
+GS A+LNFP + INS EP PV ++ E + S KK+
Sbjct: 520 RGSRALLNFP----------LRINSGEP-----EPVRVTAKRASAEPCSSSESGSWVKKR 654
Query: 238 IKI 240
K+
Sbjct: 655 KKV 663
>TC208703 similar to UP|Q84XB0 (Q84XB0) Ethylene response factor 4, partial
(38%)
Length = 919
Score = 100 bits (248), Expect = 9e-22
Identities = 64/141 (45%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Frame = +3
Query: 58 PLSLYAESNSSFPLLSNGSLEVSYNNTTIYTQV--------IKETETSLSLPSKKNKNKK 109
P+ L A S+ F S S +NT+ +T + +K ++ ++PSK+ K
Sbjct: 147 PMKLEAPSSPEFDFTSYIS-----DNTSFFTFLEGYDLMADMKFVDSDNTIPSKEVKKCN 311
Query: 110 -KTSSLASSLPLPAIKESNK-RVLRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEA 167
L SS P E +K + RGVRRRPWGKFAAEIRD TRKG RVWLGTF++E +A
Sbjct: 312 ISPEPLVSSKEKPKKLEYDKAKRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDA 491
Query: 168 ALAYDQAAFSAKGSLAVLNFP 188
A AYD AAF +G A+LNFP
Sbjct: 492 AKAYDCAAFKMRGQKAILNFP 554
>TC228657 similar to GB|BAA97157.1|8809606|AB018117 ethylene responsive
element binding factor 5 (ATERF5) {Arabidopsis
thaliana;} , partial (32%)
Length = 884
Score = 99.4 bits (246), Expect = 2e-21
Identities = 61/132 (46%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Frame = +1
Query: 101 PSKKNKNKKKTSSLASSLP--LPAIKESN-----KRVLRGVRRRPWGKFAAEIRDSTRKG 153
PS + KKT + P + +SN K+ RGVR+RPWGKFAAEIRD ++G
Sbjct: 271 PSLQISLPKKTEWIQFGEPEVTETVSQSNPNAEEKKHYRGVRQRPWGKFAAEIRDPNKRG 450
Query: 154 ARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKEMAINSEPLEEGTSPV 213
+RVWLGTF+T EAA AYD+AAF +GS A+LNFP + D K EE PV
Sbjct: 451 SRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGADDRKRQR------EEKVEPV 612
Query: 214 LAIKRKIKREHI 225
L + +KRE I
Sbjct: 613 LEV---VKREKI 639
>TC229025 UP|Q8LLR3 (Q8LLR3) Ethylene-responsive element binding protein 1,
complete
Length = 788
Score = 99.0 bits (245), Expect = 2e-21
Identities = 50/80 (62%), Positives = 60/80 (74%)
Frame = +3
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
RGVRRRPWGKFAAEIRD + GARVWLGT++TEE+AALAYD+AAF +G A LNFP +
Sbjct: 303 RGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTEEKAALAYDKAAFKMRGQKAKLNFPHLI 482
Query: 192 VKDSLKEMAINSEPLEEGTS 211
D+ E+ SEP+ TS
Sbjct: 483 DSDNSDEL---SEPVMMTTS 533
>TC215374 similar to UP|Q9LW48 (Q9LW48) Ethylene-responsive element binding
factor, partial (33%)
Length = 1018
Score = 97.1 bits (240), Expect = 8e-21
Identities = 69/162 (42%), Positives = 92/162 (56%), Gaps = 25/162 (15%)
Frame = +1
Query: 55 LLLPLSLYAESNSSFPLLSNG-SLEVSYNN--TTIYT-----QVIK-ETETSLSLPSKKN 105
L PL+ + ESN S SN S VS N+ T ++ Q+I +T +L+ KK
Sbjct: 139 LATPLNYFDESNPSPSESSNSQSSSVSLNHYFTDLFEFDSKPQIIDLQTPKTLTSAQKKP 318
Query: 106 KNKKKTSSLAS--------------SLPLPAIKES--NKRVLRGVRRRPWGKFAAEIRDS 149
+ +K S L + P+ A E+ K RGVR+RPWGKFAAEIRD
Sbjct: 319 QLNRKPSLLIAVPKKTEWIQFGSPDPNPVMAAPENLPQKNHYRGVRQRPWGKFAAEIRDP 498
Query: 150 TRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDV 191
++G+RVWLGTF+T EAA AYD+AAF +GS A+LNFP +V
Sbjct: 499 NKRGSRVWLGTFDTAVEAAKAYDRAAFRLRGSKAILNFPLEV 624
>TC219209 similar to GB|BAA95736.1|7939533|AB025608 Nicotiana EREBP-3-like
protein {Arabidopsis thaliana;} , partial (45%)
Length = 781
Score = 95.9 bits (237), Expect = 2e-20
Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
Frame = +2
Query: 98 LSLPSKKNKNKKKTSSLASSLPLPAIKESNKRV-LRGVRRRPWGKFAAEIRDSTRKGARV 156
L L SK+ K + SS+++ N V RG+RRRPWGKFAAEIRD TRKG R+
Sbjct: 71 LILSSKRRKMEGGRSSVSNG---------NVEVRYRGIRRRPWGKFAAEIRDPTRKGTRI 223
Query: 157 WLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPEDVVKDSLKE-----MAINSEPLEEGTS 211
WLGTF+T E+AA AYD AAF +G A+LNFP + + +A+++ P +S
Sbjct: 224 WLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSHNPNSSLPMPLAVSAPPSYSSSS 403
Query: 212 PVLAIKRKIKREHIARKS-SNEVSKKKIKIDHNGDRTKRE 250
H+ R + S E+ + DH+ D + E
Sbjct: 404 STSNYSGDDNNNHLVRPAFSGEIMQGG---DHDDDTFELE 514
>BM178875 similar to GP|7939533|dbj| Nicotiana EREBP-3-like protein
{Arabidopsis thaliana}, partial (44%)
Length = 421
Score = 94.7 bits (234), Expect = 4e-20
Identities = 42/59 (71%), Positives = 49/59 (82%)
Frame = +3
Query: 132 RGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTEEEAALAYDQAAFSAKGSLAVLNFPED 190
RG+RRRPWGKFAAEIRD TRKG R+WLGTF+T E+AA AYD AAF +G A+LNFP +
Sbjct: 108 RGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNE 284
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.127 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,892,794
Number of Sequences: 63676
Number of extensions: 138153
Number of successful extensions: 1146
Number of sequences better than 10.0: 209
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of query: 277
length of database: 12,639,632
effective HSP length: 96
effective length of query: 181
effective length of database: 6,526,736
effective search space: 1181339216
effective search space used: 1181339216
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146589.2