BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141109.8 + phase: 0
(509 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%) 218 7e-57
TC229309 homologue to UP|Q9LJX0 (Q9LJX0) P-glycoprotein; multi-d... 179 3e-45
TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl... 175 4e-44
TC234247 similar to GB|CAD59589.1|27368863|OSA535067 MDR-like AB... 96 7e-36
TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (... 122 2e-33
TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding ca... 135 6e-32
TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC trans... 130 1e-30
BU926948 similar to GP|27368865|e MDR-like ABC transporter {Oryz... 126 2e-29
TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC tr... 108 7e-24
TC216268 homologue to PIR|A42150|A42150 P-glycoprotein pgp1 - Ar... 83 1e-23
TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl... 107 2e-23
TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter... 103 1e-22
AW507715 weakly similar to GP|9294227|db P-glycoprotein; multi-d... 103 2e-22
AW308906 101 9e-22
TC233514 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, parti... 99 6e-21
TC213339 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (... 80 4e-19
BM525681 similar to GP|6671365|gb P-glycoprotein {Gossypium hirs... 87 2e-17
TC205367 similar to UP|O24525 (O24525) Glutathione-conjugate tra... 79 6e-15
BG839728 similar to PIR|D85023|D8 P-glycoprotein-like protein pg... 54 3e-14
TC222790 76 3e-14
>TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%)
Length = 1329
Score = 218 bits (554), Expect = 7e-57
Identities = 124/272 (45%), Positives = 165/272 (60%), Gaps = 2/272 (0%)
Frame = +1
Query: 224 AEQAISSIRTVYSFVGESKTLAAFSNALEGSVKLGLKQGLAKGLAIG-SNGVVYAIWSLI 282
+ A+ SIRTV SF E K + + N EG +K G++QGL G G S +++ +++
Sbjct: 4 SNDAVGSIRTVASFCAEDKVMELYKNKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATS 183
Query: 283 FYYGSIMVMYHGAKGGTVFVVGVTLAIGGLAFGTCFSNVRYFAEASVAGERIMEVIKRVP 342
FY G+ +V A VF V L + + S ++A A I +I +
Sbjct: 184 FYAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKS 363
Query: 343 TIDSENMEGEIIEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGK 402
ID + G ++ V GE+E +V F YPSRP+ I D L + SGKTVALVG SGSGK
Sbjct: 364 KIDPGDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGK 543
Query: 403 STVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGR- 461
STV++LLQRFY+P G+I LDG+ I +LQLKWLR QMGLVSQEP LF +I+ NI +G+
Sbjct: 544 STVIALLQRFYNPDSGQITLDGIEIRELQLKWLRQQMGLVSQEPVLFNETIRANIAYGKG 723
Query: 462 EDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
DAT EI+ AA+ +NAH FIS L QGYDT V
Sbjct: 724 GDATEAEIIAAAEMANAHKFISGLQQGYDTIV 819
>TC229309 homologue to UP|Q9LJX0 (Q9LJX0) P-glycoprotein; multi-drug
resistance related; ABC transporter-like protein,
partial (22%)
Length = 841
Score = 179 bits (453), Expect = 3e-45
Identities = 92/219 (42%), Positives = 139/219 (63%)
Frame = +1
Query: 275 VYAIWSLIFYYGSIMVMYHGAKGGTVFVVGVTLAIGGLAFGTCFSNVRYFAEASVAGERI 334
+YA +LI +YG+ +V + V V V L I + S A +
Sbjct: 13 LYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSV 192
Query: 335 MEVIKRVPTIDSENMEGEIIEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVAL 394
++ R ID ++ + + +E + GE+E +V+F YPSRP+ ++ D L++ +G++ AL
Sbjct: 193 FSILDRSTRIDPDDPDADPVESLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQAL 372
Query: 395 VGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIK 454
VG SGSGKS+V++L++RFYDPI G++++DG I KL LK LR ++GLV QEPALFA SI
Sbjct: 373 VGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIF 552
Query: 455 ENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
ENI +G+E AT E+++AA+A+N H F+S LP+GY T V
Sbjct: 553 ENIAYGKEGATEAEVIEAARAANVHGFVSGLPEGYKTPV 669
>TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
partial (15%)
Length = 605
Score = 175 bits (444), Expect = 4e-44
Identities = 85/110 (77%), Positives = 100/110 (90%)
Frame = +1
Query: 384 LKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVS 443
L+VP+GK VALVG SGSGKSTV++LLQRFYDP GGE+ +DGV I KLQLKWLRS MGLVS
Sbjct: 25 LRVPAGKRVALVGESGSGKSTVIALLQRFYDPCGGEVRVDGVGIQKLQLKWLRSCMGLVS 204
Query: 444 QEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
QEPALFATSIK+NILFG+EDAT +++V+AAKA++AHNFIS+LP GY TQV
Sbjct: 205 QEPALFATSIKDNILFGKEDATQDQVVEAAKAAHAHNFISLLPHGYHTQV 354
>TC234247 similar to GB|CAD59589.1|27368863|OSA535067 MDR-like ABC
transporter {Oryza sativa (japonica cultivar-group);} ,
partial (11%)
Length = 422
Score = 95.5 bits (236), Expect(2) = 7e-36
Identities = 43/79 (54%), Positives = 58/79 (72%)
Frame = +1
Query: 354 IEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFY 413
+E + G++E V F YP+RP+ +I N F L +PSG T ALVG SGSGKSTVVSL++RFY
Sbjct: 1 LEDIRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFY 180
Query: 414 DPIGGEILLDGVAIHKLQL 432
DP G +L+DG+ + + QL
Sbjct: 181 DPQSGAVLIDGINLREFQL 237
Score = 73.9 bits (180), Expect(2) = 7e-36
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = +2
Query: 434 WLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
W+R ++GLVSQEP LF SIKENI +G++ AT EEI AA+ +NA FI LPQG DT V
Sbjct: 242 WIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMV 421
>TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (24%)
Length = 1164
Score = 122 bits (307), Expect(2) = 2e-33
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = +1
Query: 388 SGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPA 447
+GKT+ALVG SG GKS++++L+QRFYDP G +++DG I K LK LR + +V QEP
Sbjct: 247 AGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPC 426
Query: 448 LFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
LFAT+I ENI +G E AT EI++AA +NAH FIS LP GY T V
Sbjct: 427 LFATTIYENIAYGHESATEAEIIEAATLANAHKFISGLPDGYKTFV 564
Score = 38.5 bits (88), Expect(2) = 2e-33
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 324 FAEASVAGERIMEVIKRVPTIDSENMEGEII-EKVLGEVEFNNVEFVYPSRPESVILNDF 382
F + A + E++ R I+ ++ + + +++ GEVE +V+F YP+RP+ + D
Sbjct: 51 FIKGGQAMRSVFELLDRRTEIEPDDQDATPVPDRLRGEVELKHVDFSYPTRPDMPVFRDL 230
Query: 383 CLKVPS 388
L+ S
Sbjct: 231 SLRAKS 248
>TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding cassette,
sub-family B, member 10, mitochondrial precursor
(ATP-binding cassette transporter 10) (ABC transporter
10 protein) (ABC-mitochondrial erythroid protein)
(ABC-me protein), partial (24%)
Length = 742
Score = 135 bits (339), Expect = 6e-32
Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Frame = +1
Query: 384 LKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVS 443
L + +G+TVAL G SGSGKSTV+SLLQRFY+P G+I LDG I KLQLKW R QMGLVS
Sbjct: 1 LTIHAGETVALAGESGSGKSTVISLLQRFYEPDSGQITLDGTEIQKLQLKWFRQQMGLVS 180
Query: 444 QEPALFATSIKENILFGR-EDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
QEP LF +I+ NI +G+ DAT EI+ A + +NAH FIS L QGYDT V
Sbjct: 181 QEPVLFNDTIRTNIAYGKGGDATEAEIIAATELANAHTFISSLQQGYDTIV 333
>TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC transporter,
partial (18%)
Length = 864
Score = 130 bits (328), Expect = 1e-30
Identities = 63/110 (57%), Positives = 88/110 (79%)
Frame = +1
Query: 384 LKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVS 443
L+VP+GK++A+VG SGSGKSTV+SL+ RFYDP G +L+D I L L+ LR ++GLV
Sbjct: 13 LRVPAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGLVLVDECDIKNLNLRSLRLRIGLVQ 192
Query: 444 QEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQV 493
QEPALF+T++ ENI +G+E+A+ E++ AAKA+NAH FIS +P+GY T+V
Sbjct: 193 QEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYKTEV 342
>BU926948 similar to GP|27368865|e MDR-like ABC transporter {Oryza sativa
(japonica cultivar-group)}, partial (10%)
Length = 447
Score = 126 bits (317), Expect = 2e-29
Identities = 61/146 (41%), Positives = 91/146 (61%)
Frame = +3
Query: 294 GAKGGTVFVVGVTLAIGGLAFGTCFSNVRYFAEASVAGERIMEVIKRVPTIDSENMEGEI 353
G G V + + L ++ G +N+ FA A +I E I R P ID+ + G+
Sbjct: 9 GYTPGQVMSIFLALFYASMSLGQVSTNLTAFAAGQAAAFKIFETINRHPDIDAYDTAGQQ 188
Query: 354 IEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFY 413
+ + G++E V F YPSRP+++I N F + + SG ALVG SGSGKSTV+SL++RFY
Sbjct: 189 KDDISGDIELREVCFSYPSRPDALIFNGFSISISSGTNAALVGKSGSGKSTVISLIERFY 368
Query: 414 DPIGGEILLDGVAIHKLQLKWLRSQM 439
DP GE+L+DG+ + +LQLKW+R ++
Sbjct: 369 DPQAGEVLIDGINLRELQLKWIRQKI 446
>TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC transporter,
partial (36%)
Length = 1085
Score = 108 bits (269), Expect = 7e-24
Identities = 60/135 (44%), Positives = 83/135 (61%)
Frame = +1
Query: 359 GEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGG 418
G ++F NV F Y + E IL+ VP+GK+VA+VG SGSGKST++ LL RF+DP G
Sbjct: 46 GRIQFENVHFSYLT--ERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSG 219
Query: 419 EILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASNA 478
I +D I ++ L+ LR +G+V Q+ LF +I NI +GR AT EE+ +AA+ +
Sbjct: 220 SIKIDDQNIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAAQQAAI 399
Query: 479 HNFISMLPQGYDTQV 493
HN I P Y T V
Sbjct: 400 HNTIMKFPDKYSTVV 444
>TC216268 homologue to PIR|A42150|A42150 P-glycoprotein pgp1 - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (6%)
Length = 628
Score = 83.2 bits (204), Expect(2) = 1e-23
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +3
Query: 92 ASFFVCFLEGYCWTRTGERQAARMRVRYLKAVLRQEVSYFDLHV 135
+SF VCFLEGYCWTRT ERQAARMR RYLKAVLRQ+V YFDLH+
Sbjct: 6 SSFGVCFLEGYCWTRTSERQAARMRCRYLKAVLRQDVEYFDLHI 137
Score = 48.9 bits (115), Expect = 5e-06
Identities = 31/116 (26%), Positives = 54/116 (45%), Gaps = 32/116 (27%)
Frame = +1
Query: 81 KNAVVVLYMACASFFVCFLEGYCWTRTGERQAARMR------------------------ 116
K A L + A + + E CW +GERQ+ MR
Sbjct: 277 KYAFYFLVVGAAIWASSWAEISCWIWSGERQSTTMRYFLIIKK*KA*KNFAE*INICVIF 456
Query: 117 --------VRYLKAVLRQEVSYFDLHVTSTTDVITSVSSDSLVIQDVLSDKVPNFL 164
YL+AVL Q++ +FD V T+D++ +++D++++QD +S+K+ NF+
Sbjct: 457 YFYFFLQYAFYLEAVLNQDIQFFDTEVR-TSDIVFVINTDAIMVQDAISEKLGNFI 621
Score = 45.1 bits (105), Expect(2) = 1e-23
Identities = 21/27 (77%), Positives = 27/27 (99%)
Frame = +1
Query: 133 LHVTSTTDVITSVSSDSLVIQDVLSDK 159
++VTST+++ITSVSSDSLVIQDVLS+K
Sbjct: 133 IYVTSTSEIITSVSSDSLVIQDVLSEK 213
>TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
partial (18%)
Length = 1050
Score = 107 bits (266), Expect = 2e-23
Identities = 53/119 (44%), Positives = 79/119 (65%), Gaps = 4/119 (3%)
Frame = +3
Query: 377 VILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLR 436
+I F + + + ++ ALVG SGSG ST++ L++RFYDP+ G + +DG I L+ LR
Sbjct: 6 MIFQGFSIXIDAXRSTALVGQSGSGXSTIIGLIERFYDPMKGIVTIDGRDIKSYHLRSLR 185
Query: 437 SQMGLVSQEPALFATSIKENILFGREDATYE----EIVDAAKASNAHNFISMLPQGYDT 491
+ LVSQEP LF +I+ENI +G + + EI++AA+A+NAH+FI+ L GYDT
Sbjct: 186 KHIALVSQEPTLFGGTIRENIAYGASNNNNKVDETEIIEAARAANAHDFIASLKDGYDT 362
>TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter IDI7,
partial (35%)
Length = 1076
Score = 103 bits (258), Expect = 1e-22
Identities = 55/111 (49%), Positives = 76/111 (67%), Gaps = 1/111 (0%)
Frame = +2
Query: 384 LKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVS 443
LK+ G VALVG SG GKST+ +L++RFYDP G+ILL+GV + ++ K L ++ +VS
Sbjct: 5 LKLHPGSKVALVGPSGGGKSTIANLIERFYDPTKGKILLNGVPLVEISHKHLHRKISIVS 184
Query: 444 QEPALFATSIKENILFGREDATYE-EIVDAAKASNAHNFISMLPQGYDTQV 493
QEP LF SI+ENI +G + + +I +AAK +NAH FIS P+ Y T V
Sbjct: 185 QEPTLFNCSIEENIAYGFDGKVNDVDIENAAKMANAHEFISKFPEKYQTFV 337
>AW507715 weakly similar to GP|9294227|db P-glycoprotein; multi-drug
resistance related; ABC transporter-like protein
{Arabidopsis thaliana}, partial (17%)
Length = 655
Score = 103 bits (256), Expect = 2e-22
Identities = 49/108 (45%), Positives = 75/108 (69%)
Frame = +2
Query: 384 LKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVS 443
L++ +G ALVG + SGK++V++L+ FYDPI ++++DG I K LK +R ++GL
Sbjct: 8 LRIRAGHIQALVGANSSGKTSVIALIDTFYDPIAVKVMVDGKDIMKSNLKSMRLKIGLAP 187
Query: 444 QEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDT 491
EPALFA SI +NI + E A +++ AA+A+N H F+S LP+GY+T
Sbjct: 188 LEPALFAASIVDNIAYATEGAAEADVIAAARAANVHGFVSGLPKGYNT 331
>AW308906
Length = 445
Score = 101 bits (251), Expect = 9e-22
Identities = 50/127 (39%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +3
Query: 324 FAEASVAGERIMEVIKRVPTIDSENMEGEII-EKVLGEVEFNNVEFVYPSRPESVILNDF 382
F + A +++ R I+ ++ + + + + GEVE +V+F YP+RP+ + +
Sbjct: 63 FIKGGHAMRSAFDLLDRRTEIEPDDPDATPVPDSLRGEVELKHVDFSYPTRPDMSVFRNL 242
Query: 383 CLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLV 442
L+ +GKT+ALVG SG GKS+V++L+QRFYDP G++++DG I K LK LR + +V
Sbjct: 243 SLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGQVMIDGKDIRKYNLKSLRRHIAVV 422
Query: 443 SQEPALF 449
QEP LF
Sbjct: 423 PQEPCLF 443
>TC233514 similar to UP|Q8LPQ6 (Q8LPQ6) At4g25450/M7J2_180, partial (20%)
Length = 505
Score = 98.6 bits (244), Expect = 6e-21
Identities = 53/125 (42%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 359 GEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGG 418
G++ +V F YP RP+ IL L++ G ALVG SG+GKSTVV LL FY+P G
Sbjct: 129 GDICLEDVYFSYPLRPDVEILRGLNLRLKFGTVTALVGPSGAGKSTVVQLLSHFYEPTSG 308
Query: 419 EILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFG--REDATYEEIVDAAKAS 476
I + G + + +V+QEP LF+ S+ ENI +G ED + E+++ AAKA+
Sbjct: 309 CITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKEDVIXAAKAA 488
Query: 477 NAHNF 481
NAH+F
Sbjct: 489 NAHDF 503
>TC213339 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (15%)
Length = 582
Score = 80.1 bits (196), Expect(2) = 4e-19
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = +1
Query: 418 GEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASN 477
G++++DG I K LK LR + +V QEP LFAT+I ENI +G + A+ EI++AA +N
Sbjct: 325 GQVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSASDAEIIEAATLAN 504
Query: 478 AHNFISMLPQGYDTQV 493
AH FIS LP GY T V
Sbjct: 505 AHKFISSLPDGYKTFV 552
Score = 32.7 bits (73), Expect(2) = 4e-19
Identities = 16/67 (23%), Positives = 35/67 (51%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 FAEASVAGERIMEVIKRVPTIDSENMEGEII-EKVLGEVEFNNVEFVYPSRPESVILNDF 382
F + A +++ R I+ ++ + + + + GEVE +V+F YP+RP+ + +
Sbjct: 132 FIKGGHAMRSAFDLLDRRTEIEPDDPDATPVPDSLRGEVELKHVDFSYPTRPDMSVFRNL 311
Query: 383 CLKVPSG 389
L+ +G
Sbjct: 312 SLRARAG 332
>BM525681 similar to GP|6671365|gb P-glycoprotein {Gossypium hirsutum},
partial (11%)
Length = 428
Score = 86.7 bits (213), Expect = 2e-17
Identities = 49/138 (35%), Positives = 77/138 (55%)
Frame = +2
Query: 275 VYAIWSLIFYYGSIMVMYHGAKGGTVFVVGVTLAIGGLAFGTCFSNVRYFAEASVAGERI 334
+++ + L +YGS+++ A ++ L + LA G + + + +
Sbjct: 20 IFSSYGLALWYGSVLMEKELASFKSIMKAFFVLIVTALAMGETLALAPDLLKGNQMVASV 199
Query: 335 MEVIKRVPTIDSENMEGEIIEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVAL 394
EV+ R I E GE ++ V G +E + F YPSRP+ +I DF L+VP+GK+VAL
Sbjct: 200 FEVMDRKSGISCE--VGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVAL 373
Query: 395 VGGSGSGKSTVVSLLQRF 412
VG SGSGKS+V+SL+ RF
Sbjct: 374 VGQSGSGKSSVISLILRF 427
>TC205367 similar to UP|O24525 (O24525) Glutathione-conjugate transporter
AtMRP4, partial (23%)
Length = 1548
Score = 78.6 bits (192), Expect = 6e-15
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +2
Query: 359 GEVEFNNVEFVY-PSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIG 417
G V+ +++ Y P+ P ++L L + G+ + +VG +GSGKST++ + R +P G
Sbjct: 335 GHVDIKDLQVRYRPNTP--LVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTG 508
Query: 418 GEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASN 477
G+I++DG+ I L L LRS+ G++ QEP LF +++ NI T EEI + +
Sbjct: 509 GKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNI-DPTGQYTDEEIWKSLERCQ 685
Query: 478 AHNFISMLPQGYDTQVSVN 496
+ ++ P+ DT V N
Sbjct: 686 LKDAVASKPEKLDTSVVDN 742
>BG839728 similar to PIR|D85023|D8 P-glycoprotein-like protein pgp3
[imported] - Arabidopsis thaliana, partial (10%)
Length = 577
Score = 54.3 bits (129), Expect(2) = 3e-14
Identities = 30/105 (28%), Positives = 55/105 (51%)
Frame = -1
Query: 4 GDQKNVSINDKKKKNGSFKSIFMHADVLDWFFMAFGFFGAIGDGMMVPFVLFITSKIMNS 63
G+++ +K + F +F AD D MA G GAIG+G+ +P + + ++++S
Sbjct: 457 GEKREKGKQKEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLMTLLFGQMIDS 278
Query: 64 VGSASGTSSSNFVHDVNKNAVVVLYMACASFFVCFLEGYCWTRTG 108
G S +++ V +V+K ++ +Y+A S FL+ W TG
Sbjct: 277 FG--SNQQNTHVVEEVSKVSLKFVYLAVGSGMAAFLQVTSWMVTG 149
Score = 42.4 bits (98), Expect(2) = 3e-14
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -2
Query: 108 GERQAARMRVRYLKAVLRQEVSYFDLHVTSTTDVITSVS 146
GERQAAR+R YLK +LRQ+V++FD T+T +VI +S
Sbjct: 150 GERQAARIRGLYLKTILRQDVAFFDKE-TNTGEVIGKMS 37
>TC222790
Length = 563
Score = 76.3 bits (186), Expect = 3e-14
Identities = 43/169 (25%), Positives = 84/169 (49%)
Frame = +1
Query: 102 YCWTRTGERQAARMRVRYLKAVLRQEVSYFDLHVTSTTDVITSVSSDSLVIQDVLSDKVP 161
Y +T GER AR+R+ A+L EV++FD +T + +++D+ +++ L+D++
Sbjct: 19 YFYTLMGERLTARVRLLMFSAILNNEVAWFDKDENNTGSLTAMLAADATLVRSALADRLS 198
Query: 162 NFLVNASRFLSSNIVAFALLWRLAIVGFPFMVLLVIPGYMYKRISMRLARKIREEYNQAG 221
+ N + +++ ++ F L W+L V + LL+ + Y++A
Sbjct: 199 TIVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSRAT 378
Query: 222 TIAEQAISSIRTVYSFVGESKTLAAFSNALEGSVKLGLKQGLAKGLAIG 270
++A +AI++IRTV +F + F++ L K L +G G G
Sbjct: 379 SLAREAIANIRTVAAFGAXDRVSTQFASELNKPNKQALLRGHISGFGYG 525
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.138 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,165,689
Number of Sequences: 63676
Number of extensions: 250008
Number of successful extensions: 1531
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of query: 509
length of database: 12,639,632
effective HSP length: 101
effective length of query: 408
effective length of database: 6,208,356
effective search space: 2533009248
effective search space used: 2533009248
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Medicago: description of AC141109.8