BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141106.8 - phase: 0
(337 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229885 171 4e-43
TC215220 similar to GB|AAL08296.1|15912325|AY056440 At1g60710/F8... 86 2e-17
TC215221 similar to UP|A115_TOBAC (P40691) Auxin-induced protein... 85 5e-17
TC229822 similar to UP|O22627 (O22627) Auxin-induced protein, pa... 55 2e-16
TC215788 weakly similar to UP|O22627 (O22627) Auxin-induced prot... 82 4e-16
TC205137 similar to PIR|T52133|T52133 potassium channel beta sub... 81 8e-16
TC215219 similar to UP|O22707 (O22707) F8A5.21 protein, partial ... 80 1e-15
TC223174 77 8e-15
TC215789 similar to UP|O22627 (O22627) Auxin-induced protein, pa... 75 3e-14
TC224600 similar to UP|Q94A68 (Q94A68) At1g06690/F4H5_17, partia... 72 3e-13
TC230132 similar to UP|O22627 (O22627) Auxin-induced protein, pa... 67 9e-12
TC204615 similar to GB|AAL08296.1|15912325|AY056440 At1g60710/F8... 67 9e-12
TC204617 similar to UP|Q9ASZ9 (Q9ASZ9) At1g60730/F8A5_24, partia... 64 7e-11
TC205138 homologue to UP|O49847 (O49847) Potassium channel beta ... 59 4e-09
TC225256 weakly similar to UP|6DCS_SOYBN (P26690) NAD(P)H depend... 57 1e-08
TC227002 similar to UP|Q41399 (Q41399) Chalcone reductase, parti... 52 5e-07
TC203416 similar to UP|Q84TF0 (Q84TF0) At2g37790, partial (87%) 50 2e-06
TC232445 similar to UP|Q84L20 (Q84L20) L-galactose dehydrogenase... 49 4e-06
TC203782 similar to UP|Q84TF0 (Q84TF0) At2g37790, partial (97%) 48 5e-06
TC228021 similar to PIR|T02543|T02543 aldehyde dehydrogenase hom... 48 5e-06
>TC229885
Length = 1257
Score = 171 bits (433), Expect = 4e-43
Identities = 94/194 (48%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Frame = +3
Query: 121 LVIATKVAGPSGQMTWIRGGPKSL--DATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVP 178
+++ATKV G S + +++R L DA NI ++++ SL R+ DYIDL QIHWPDRYV
Sbjct: 234 IILATKVCGYSERSSYLRENANVLRVDAANIKESVEKSLKRLDTDYIDLLQIHWPDRYVA 413
Query: 179 MFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSY 238
+FGE YD + SS+ EQL A +N+GK+RYIG+SNET YG+M+F+ A K
Sbjct: 414 LFGEFSYDYSKWRSSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVH-ASKVEGL 590
Query: 239 PKIVSLQNSYSLLCR-TFDSAMAECCHQE--SISLLAYSPLAMGILSGKYFS-HGNGPAD 294
PKIVS+QNSYSLL R F+ + E CH + +I LLAYSPL G L+GKY +
Sbjct: 591 PKIVSIQNSYSLLVRCRFEVDLVEVCHPKNCNIGLLAYSPLGGGSLTGKYIDINSEAAKS 770
Query: 295 ARLNLFKGLLTHCN 308
RLNLF G + N
Sbjct: 771 GRLNLFPGYMERYN 812
>TC215220 similar to GB|AAL08296.1|15912325|AY056440 At1g60710/F8A5_23
{Arabidopsis thaliana;} , partial (52%)
Length = 1312
Score = 86.3 bits (212), Expect = 2e-17
Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 7/278 (2%)
Frame = +1
Query: 29 KVELMMSGGGGVPVFNLAPN-LNVSRLCLGTMT----FGEQNTLSQSFQLLDEAYHAGIN 83
+VE+ + +P L L VS+L LG MT + + + ++ A+ GI
Sbjct: 103 RVEMAEAESVQIPQVKLGTQGLVVSKLGLGCMTLSGRYNDPLPEEEGISVIKHAFSQGIT 282
Query: 84 FFDSAEMYPVPQRAQTWGMSEEYFGHWIKHRNIPRDRLVIATK--VAGPSGQMTWIRGGP 141
FFD++++Y + +E G +K +PR+++ +ATK VA I+G P
Sbjct: 283 FFDTSDLYGLDHA------NEFLLGKALKQ--LPREKIQVATKFGVAVAKFPNFQIKGTP 438
Query: 142 KSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLD 201
+ + + SL R+ ++YIDLY H D+ VP I+E +
Sbjct: 439 EY-----VRSCCEASLKRLDVEYIDLYYQHRIDQTVP-----------------IEETVG 552
Query: 202 ALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAE 261
L + V +GK++YIGLS +P ++ + I +LQ +SL R + +
Sbjct: 553 ELKKLVEEGKVKYIGLSEASP-------DTIRRAHAVHPITALQIEWSLWTRDIEEEIIP 711
Query: 262 CCHQESISLLAYSPLAMGILSGKYFSHGNGPADARLNL 299
C + I ++ YSPL G GK N PA L L
Sbjct: 712 LCRELGIGIVPYSPLGRGFFGGKGVLE-NMPASTVLTL 822
>TC215221 similar to UP|A115_TOBAC (P40691) Auxin-induced protein PCNT115,
partial (80%)
Length = 1085
Score = 84.7 bits (208), Expect = 5e-17
Identities = 67/242 (27%), Positives = 109/242 (44%), Gaps = 6/242 (2%)
Frame = +1
Query: 49 LNVSRL---CLG-TMTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSE 104
L VS+L CLG T + E ++ A+ GI FFD+A++Y G +E
Sbjct: 34 LEVSKLGFGCLGLTGAYNEPLPEQDGISIIKYAFSKGITFFDTADVYGA-------GANE 192
Query: 105 EYFGHWIKHRNIPRDRLVIATK--VAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQL 162
G +K +PR+++ +ATK +A I+G P+ + + SL R+ +
Sbjct: 193 ILLGKALKQ--LPREKIQLATKFGIARLDFSNMLIKGSPEY-----VRSCCETSLKRLDV 351
Query: 163 DYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETP 222
+YIDLY H D VP I+E + L + V +GK+RYIGLS +
Sbjct: 352 EYIDLYYQHRVDTSVP-----------------IEETVGELKKLVEEGKVRYIGLSEASS 480
Query: 223 YGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILS 282
++ + I ++Q +S+ R + + C + I +++YSPL G
Sbjct: 481 -------DTIRRAHAVHPITAVQIEWSIWTRDIEDQIVTICRELGIGIVSYSPLGRGFFG 639
Query: 283 GK 284
GK
Sbjct: 640 GK 645
>TC229822 similar to UP|O22627 (O22627) Auxin-induced protein, partial (60%)
Length = 1258
Score = 54.7 bits (130), Expect(2) = 2e-16
Identities = 29/86 (33%), Positives = 46/86 (52%)
Frame = +1
Query: 199 QLDALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSA 258
++ L + VN+GKI+YIGLS +P +++ + I +LQ YSL R +
Sbjct: 487 KMGELKKLVNEGKIKYIGLSQASP-------DTIKRAHAVHPISALQMEYSLWTRDIEEE 645
Query: 259 MAECCHQESISLLAYSPLAMGILSGK 284
+ C + I ++AYSPL G +GK
Sbjct: 646 IIPLCRELGIGIVAYSPLGHGFFAGK 723
Score = 48.1 bits (113), Expect(2) = 2e-16
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +3
Query: 49 LNVSRLCLGTMTFGEQNTLSQSFQ----LLDEAYHAGINFFDSAEMYPVPQRAQTWGMSE 104
L +SRL G + S + ++ EA++ G+ FFD+++ Y + +E
Sbjct: 105 LEISRLGFGCVGLSGLYNAPLSHEAGCSIIKEAFNMGVTFFDTSDFYGLNHD------NE 266
Query: 105 EYFGHWIKHRNIPRDRLVIATK--VAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQL 162
G +K +PR+++ +ATK + G ++G P+ + Q + SL R+ +
Sbjct: 267 IMIGKALKE--LPREKVQLATKFGLVRSDGVFAGVKGTPEY-----VRQCCEASLKRLDV 425
Query: 163 DYIDLYQIHWPDRYVPM 179
+YIDLY H D VP+
Sbjct: 426 EYIDLYYQHRVDTSVPI 476
>TC215788 weakly similar to UP|O22627 (O22627) Auxin-induced protein, partial
(75%)
Length = 1350
Score = 81.6 bits (200), Expect = 4e-16
Identities = 68/243 (27%), Positives = 102/243 (40%), Gaps = 7/243 (2%)
Frame = +1
Query: 49 LNVSRLCLGTM----TFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSE 104
L VS+L G M + + L+ A+ G+ FFDSA+ Y G +
Sbjct: 88 LEVSKLGFGCMGLSGVYNDPVPEEVGISLIKHAFTKGVTFFDSADFYGARANEVLVGKAL 267
Query: 105 EYFGHWIKHRNIPRDRLVIATK---VAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQ 161
R+ PRD+ IATK V +G + + G P+ + + SL R+
Sbjct: 268 ---------RDFPRDQFQIATKFGIVKMENGNVI-VNGSPEY-----VRSCCEGSLQRLG 402
Query: 162 LDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNET 221
+ YIDLY H D VP I++ + L R V +GKIRYIGLS +
Sbjct: 403 VSYIDLYYQHRVDTTVP-----------------IEDTMGELKRLVQEGKIRYIGLSEAS 531
Query: 222 PYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGIL 281
P ++ + I ++Q +SL R + + C + I ++ YSPL G
Sbjct: 532 P-------DTIRRAHAVHPITAVQLEWSLWTREIEQDIVPLCRELGIGIVPYSPLGRGFF 690
Query: 282 SGK 284
GK
Sbjct: 691 GGK 699
>TC205137 similar to PIR|T52133|T52133 potassium channel beta subunit homolog
[imported] - Arabidopsis thaliana {Arabidopsis
thaliana;} , complete
Length = 1525
Score = 80.9 bits (198), Expect = 8e-16
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
Frame = +2
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS+L G ++FG Q + ++ LL G+NFFD+AE+Y G +EE
Sbjct: 182 LKVSQLSYGAWVSFGNQLDVKEAKALLQCCRDHGVNFFDNAEVY-------ANGRAEEIM 340
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGP--KSLDATNISQAIDNSLLRMQLDYI 165
G I+ R +V++TK+ W GP K L ++ + SL R++++Y+
Sbjct: 341 GQAIRELGWKRSDIVVSTKI-------FWGGQGPNDKGLSRKHVVEGTKASLKRLEMEYV 499
Query: 166 DLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGL 225
D+ H PD P I+E + A++ ++ G Y G S + +
Sbjct: 500 DVLYCHRPDTSTP-----------------IEETVRAMNHVIDRGWAFYWGTSEWSAQQI 628
Query: 226 MKFIQVAEKSSSYPKIVSLQNSYSLLCR-TFDSAMAECCHQESISLLAYSPLAMGILSGK 284
+ VA++ IV Q Y+LL R +S L +SPLA G+L+GK
Sbjct: 629 TEAWAVAQRLDLVGPIVE-QPEYNLLSRHKVESEFLPLYTNYGTGLTTWSPLASGVLTGK 805
Query: 285 YFSHGNGPADARLNL 299
Y G P D+R L
Sbjct: 806 Y-KKGVIPPDSRFAL 847
>TC215219 similar to UP|O22707 (O22707) F8A5.21 protein, partial (52%)
Length = 1347
Score = 80.1 bits (196), Expect = 1e-15
Identities = 62/233 (26%), Positives = 103/233 (43%), Gaps = 3/233 (1%)
Frame = +3
Query: 55 CLG-TMTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKH 113
C+G T + + ++ A+ GI FFD+A++Y +E G +K
Sbjct: 78 CMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVYGA-------NANELLVGKALKQ 236
Query: 114 RNIPRDRLVIATK--VAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIH 171
+PR+++ IATK +A I+G P+ + + SL R+ ++YIDLY H
Sbjct: 237 --LPREKIQIATKFGIASRGFPDMKIKGSPEY-----VRSCCEASLKRLDVEYIDLYYQH 395
Query: 172 WPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQV 231
D VP I+E + L + V +GK++YIGLS +P
Sbjct: 396 RVDTSVP-----------------IEETVGELKKLVEEGKVKYIGLSEASP-------DT 503
Query: 232 AEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGK 284
++ + I ++Q +SL R + + C + I ++ YSPL G GK
Sbjct: 504 IRRAHAIHPITAVQIEWSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGK 662
>TC223174
Length = 474
Score = 77.4 bits (189), Expect = 8e-15
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +3
Query: 48 NLNVSRLCLGTMTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
+LN+S + LGTMTFGEQNT ++ +L+ A+ GIN D+AE YP+P + +T G ++ Y
Sbjct: 252 DLNISEITLGTMTFGEQNTEKEAHDILNYAFDRGINALDTAEAYPIPMKKETQGSTDLYI 431
Query: 108 GHWIKHRNIPRDRLV 122
G W+K + PRD+++
Sbjct: 432 GSWLKSQ--PRDKVL 470
>TC215789 similar to UP|O22627 (O22627) Auxin-induced protein, partial (59%)
Length = 1396
Score = 75.5 bits (184), Expect = 3e-14
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 5/246 (2%)
Frame = +3
Query: 73 LLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKHRNIPRDRLVIATK--VAGP 130
L+ A+ GI FFD+++ Y +E G +K +PRD++ IA+K +
Sbjct: 198 LIKYAFSNGITFFDTSDFYGPYT-------NEVLVGKALKE--LPRDQIQIASKFGIVKV 350
Query: 131 SGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQ 190
+RG P+ + + SL R+ ++YIDLY H D VP
Sbjct: 351 ESNDAIVRGDPEY-----VRSCCEASLRRLGVEYIDLYYPHRIDTTVP------------ 479
Query: 191 YSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSL 250
I+E + L + V +GK++YIGLS +P ++ + I +LQ +SL
Sbjct: 480 -----IEETMGELKKLVEEGKVKYIGLSEASP-------DTIRRAHAIHPITALQMEWSL 623
Query: 251 LCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFSHGNGPADARLNL---FKGLLTHC 307
R + + C + I ++ +SPL G GK + PAD+ L + F+G
Sbjct: 624 WSREIEDQLLPLCRELGIGIVPFSPLGRGFFGGKGVIE-SIPADSYLAIQPRFQGQKLDK 800
Query: 308 NICFAF 313
N F F
Sbjct: 801 NKTFYF 818
>TC224600 similar to UP|Q94A68 (Q94A68) At1g06690/F4H5_17, partial (73%)
Length = 985
Score = 72.4 bits (176), Expect = 3e-13
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 3/205 (1%)
Frame = +1
Query: 84 FFDSAEMYPVPQRAQTWGMSEEYFGHWIKHRNI--PRDRLVIATKVAGPSGQMTWIRGGP 141
FFD+AE+Y SE G +IK R P + +ATK A + W R G
Sbjct: 55 FFDTAEVYGSGLALGAVN-SEVLLGRYIKERKEKDPDVEIEVATKFAA----LPW-RFGR 216
Query: 142 KSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLD 201
+S + A+ +SL R+ L +DLYQ+HWP ++G Y +D
Sbjct: 217 QS-----VLNALKDSLCRLGLTSVDLYQLHWPG----VWGNEGY--------------ID 327
Query: 202 ALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMA 260
L AV G ++ +G+SN + L + + +K + + Q +YSL+ R ++ +
Sbjct: 328 GLGDAVEKGLVKAVGVSNYSEKRLREAYEKLKKRGI--PLATNQVNYSLIYRVPEENGVK 501
Query: 261 ECCHQESISLLAYSPLAMGILSGKY 285
C + I+++AYSP+A G L+GKY
Sbjct: 502 AACDELGITIIAYSPIAQGALTGKY 576
>TC230132 similar to UP|O22627 (O22627) Auxin-induced protein, partial (54%)
Length = 824
Score = 67.4 bits (163), Expect = 9e-12
Identities = 43/134 (32%), Positives = 62/134 (46%)
Frame = +3
Query: 151 QAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDG 210
Q + SL R+ +D+IDLY H D VP I++ + L + VN+G
Sbjct: 3 QCCEASLKRLDVDHIDLYYQHRVDTSVP-----------------IEDTMGELKQLVNEG 131
Query: 211 KIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISL 270
KI+YIGLS ++ + I +LQ YSL R + + C Q I +
Sbjct: 132 KIKYIGLSEANA-------DTIRRAHAVHPITALQMEYSLWTRDIEEEIIPLCRQLGIGI 290
Query: 271 LAYSPLAMGILSGK 284
+AYSPL G +GK
Sbjct: 291 VAYSPLGRGFFAGK 332
>TC204615 similar to GB|AAL08296.1|15912325|AY056440 At1g60710/F8A5_23
{Arabidopsis thaliana;} , partial (94%)
Length = 2219
Score = 67.4 bits (163), Expect = 9e-12
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 3/231 (1%)
Frame = +1
Query: 55 CLGTMTF-GEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKH 113
C+G F G L+ A +G+ F D++++Y +E G +K
Sbjct: 1066 CMGMSAFYGPPKPEPDMIALIHHAVQSGVTFLDTSDVYGPHT-------NELLLGKALKG 1224
Query: 114 RNIPRDRLVIATK--VAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIH 171
R ++ +ATK ++ P G+ IRG P + A + SL R+ +D IDLY H
Sbjct: 1225 G--VRKKVELATKFGISYPEGKWE-IRGDP-----AYVRDACEGSLKRLGIDCIDLYYQH 1380
Query: 172 WPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQV 231
D VP I+ + L + V +GKI+YIGLS +
Sbjct: 1381 RIDTRVP-----------------IEVTIGELKKLVEEGKIKYIGLSEAS-------AST 1488
Query: 232 AEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILS 282
++ + I ++Q +SL R + + C + I ++AYSPL G LS
Sbjct: 1489 IRRAHAVHPITAVQLEWSLWSRDVEEEIVPTCRELGIGIVAYSPLGRGFLS 1641
>TC204617 similar to UP|Q9ASZ9 (Q9ASZ9) At1g60730/F8A5_24, partial (98%)
Length = 1579
Score = 64.3 bits (155), Expect = 7e-11
Identities = 64/230 (27%), Positives = 97/230 (41%), Gaps = 2/230 (0%)
Frame = +1
Query: 55 CLGTMTF-GEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKH 113
C+G F G L+ A G+ F D++++Y +E G +K
Sbjct: 229 CMGMSAFYGPPKPDPDMIALIHHAVQTGVTFLDTSDVYGPHT-------NELLLGKALKG 387
Query: 114 RNIPRDRLVIATKVA-GPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIHW 172
RD + +ATK + IRG P + A A + SL R+ +D IDLY H
Sbjct: 388 G--VRDEVELATKFGINVAEGKREIRGDPAYVRA-----ACEGSLKRLGIDCIDLYYQHR 546
Query: 173 PDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQVA 232
D VP+ I+I E L + V +GKI+YIGLS +
Sbjct: 547 IDTRVPI-------------EITIGE----LKKLVEEGKIKYIGLSEAS-------ASTI 654
Query: 233 EKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILS 282
++ + I ++Q +SL R + + C + I ++AYSPL G LS
Sbjct: 655 RRAHAVHPITAVQLEWSLWSRDVEEEIVPTCRELGIGIVAYSPLGRGFLS 804
>TC205138 homologue to UP|O49847 (O49847) Potassium channel beta subunit
(Fragment), partial (45%)
Length = 547
Score = 58.5 bits (140), Expect = 4e-09
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 3/134 (2%)
Frame = +3
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS+L G ++FG Q + ++ LL G+NFFD+AE+Y G +EE
Sbjct: 138 LKVSQLSYGAWVSFGNQLDVKEAKALLQCCRDHGVNFFDNAEVY-------ANGRAEEIM 296
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGP--KSLDATNISQAIDNSLLRMQLDYI 165
G I+ R +V++TK+ W GP K L ++ + SL R+ ++Y+
Sbjct: 297 GQAIRELGWKRSDIVVSTKI-------FWGGQGPNDKGLSRKHVVEGTKASLKRLDMEYV 455
Query: 166 DLYQIHWPDRYVPM 179
D+ H PD P+
Sbjct: 456 DVLYCHRPDSSTPI 497
>TC225256 weakly similar to UP|6DCS_SOYBN (P26690) NAD(P)H dependent
6'-deoxychalcone synthase , partial (95%)
Length = 1196
Score = 57.0 bits (136), Expect = 1e-08
Identities = 59/214 (27%), Positives = 88/214 (40%), Gaps = 3/214 (1%)
Frame = +3
Query: 76 EAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKHRNIP-RDRLVIATKVAGPSGQM 134
EA G FD+A Y V Q E +K I RD+L I TK+
Sbjct: 159 EAIKQGYRHFDAASAYGVEQSVG------EAIAEALKQGLIASRDQLFITTKL------- 299
Query: 135 TWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSI 194
W+ A I A+ SL +QL+YIDL+ IHWP P G+ Y P++ +
Sbjct: 300 -WVTDN----HAHTILPALQKSLRTLQLEYIDLFLIHWPIATKP--GKVVY-PIEVSEIV 455
Query: 195 SIDEQ--LDALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLC 252
D + ++ G + IG+SN + I+ EK S+ I N +
Sbjct: 456 EFDMKGVWGSMEECQRLGLTKAIGVSNFS-------IKKLEKLLSFATIPPAVNQVEVNL 614
Query: 253 RTFDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
+ + C ++ I++ A+SPL G G F
Sbjct: 615 GWQQQKLRDFCKEKGITVTAFSPLRKGASRGANF 716
>TC227002 similar to UP|Q41399 (Q41399) Chalcone reductase, partial (93%)
Length = 1165
Score = 51.6 bits (122), Expect = 5e-07
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Frame = +3
Query: 73 LLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWI-KHRNI----PRDRLVIATKV 127
+L +A+ G FD+A +Y SEE G + K + R+ L I +K+
Sbjct: 114 ILIDAFEVGYRHFDTASLYE----------SEESLGKAVAKALELGLINSREELFITSKL 263
Query: 128 AGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDP 187
W L + A+ SL ++ L+Y+DLY IHWP R P + ++
Sbjct: 264 --------WSTDAHPDL----VVPALKTSLQKLGLEYVDLYLIHWPVRLKPE-AKGYHNI 404
Query: 188 VQQYSSISIDEQ--LDALSRAVNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQ 245
+++ S D + +A+ G + IG+SN +G+ K Q+ E ++ P +
Sbjct: 405 LKENVLPSFDMKGIWEAMEECYRLGLAKSIGVSN---FGIKKLSQLLENATIPPAV---- 563
Query: 246 NSYSLLCRTFDSAMAECCHQESISLLAYSPL 276
N + + E C Q+ I + A+SPL
Sbjct: 564 NQVEMSPAWQQGKLKEFCKQKGIHVSAWSPL 656
>TC203416 similar to UP|Q84TF0 (Q84TF0) At2g37790, partial (87%)
Length = 1225
Score = 49.7 bits (117), Expect = 2e-06
Identities = 37/130 (28%), Positives = 56/130 (42%), Gaps = 1/130 (0%)
Frame = +1
Query: 148 NISQAIDNSLLRMQLDYIDLYQIHWPDRYVP-MFGETEYDPVQQYSSISIDEQLDALSRA 206
++ +A+D +L +QLDY+DLY IHWP R FG + + I A+
Sbjct: 286 DVPKALDKTLQELQLDYLDLYLIHWPVRMKSGTFGLNK----EYLEQPDIPNTWRAMEAL 453
Query: 207 VNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQE 266
+ K R IG+SN + L + +A ++V N L + C +
Sbjct: 454 YDSDKARAIGVSNFSSKKLQDLLDIA-------RVVPAVNQVELHPGWQQPKLRAFCESK 612
Query: 267 SISLLAYSPL 276
I L YSPL
Sbjct: 613 EIHLSGYSPL 642
>TC232445 similar to UP|Q84L20 (Q84L20) L-galactose dehydrogenase, partial
(47%)
Length = 566
Score = 48.5 bits (114), Expect = 4e-06
Identities = 30/95 (31%), Positives = 48/95 (49%)
Frame = +1
Query: 77 AYHAGINFFDSAEMYPVPQRAQTWGMSEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTW 136
A+ +GINFFD++ Y +SE+ G +K PR+ V+ATK +
Sbjct: 181 AFQSGINFFDTSPYYGGT-------LSEKVLGKALKALGAPRNSYVVATKCGRYKEGFDF 339
Query: 137 IRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIH 171
A ++++I+ SL R+QLDY+D+ Q H
Sbjct: 340 --------SAERVTRSIEESLERLQLDYVDILQCH 420
>TC203782 similar to UP|Q84TF0 (Q84TF0) At2g37790, partial (97%)
Length = 1490
Score = 48.1 bits (113), Expect = 5e-06
Identities = 36/129 (27%), Positives = 59/129 (44%)
Frame = +3
Query: 148 NISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAV 207
++ +A+D +L +QLDY+DLY IHWP R + + + Q S + ++AL
Sbjct: 438 DVPKALDKTLQDLQLDYLDLYLIHWPVRMKSGSVGFKKEYLDQPDIPSTWKAMEAL---Y 608
Query: 208 NDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQES 267
+ GK R IG+SN + L + +A ++ N L + C +
Sbjct: 609 DSGKARAIGVSNFSSKKLQDLMNIA-------RVPPAVNQVELHPGWQQPKLHAFCESKG 767
Query: 268 ISLLAYSPL 276
+ L YSPL
Sbjct: 768 VHLSGYSPL 794
>TC228021 similar to PIR|T02543|T02543 aldehyde dehydrogenase homolog
At2g37770 - Arabidopsis thaliana {Arabidopsis thaliana;}
, partial (98%)
Length = 1119
Score = 48.1 bits (113), Expect = 5e-06
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 148 NISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAV 207
++ +A+D +L +QLDYIDLY IHWP R + + + + + ++AL+++
Sbjct: 267 DVPEALDRTLRDLQLDYIDLYLIHWPIRMKKGSVGFKAENIVPSDIPNTWKAMEALNKS- 443
Query: 208 NDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQES 267
GK R IG+SN + L + ++ Y ++ N + C +
Sbjct: 444 --GKARAIGVSNFSTKKLGELLE-------YARVTPAVNQSECHPAWRQDKLKAFCKSKG 596
Query: 268 ISLLAYSPL-AMGILSGKYFSH 288
+ YSPL + L G + +H
Sbjct: 597 VHFSGYSPLGSPAWLEGDFLNH 662
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,348,152
Number of Sequences: 63676
Number of extensions: 228450
Number of successful extensions: 1363
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of query: 337
length of database: 12,639,632
effective HSP length: 98
effective length of query: 239
effective length of database: 6,399,384
effective search space: 1529452776
effective search space used: 1529452776
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC141106.8