BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140721.5 - phase: 0
(814 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC208807 similar to UP|Q9NGX0 (Q9NGX0) AMP deaminase, partial (31%) 585 e-167
TC217182 weakly similar to UP|Q76NQ9 (Q76NQ9) CG32626-PB, partia... 424 e-119
TC222250 similar to UP|Q7SH02 (Q7SH02) Probable AMP deaminase, p... 214 1e-87
BU761715 252 4e-67
BM086009 214 2e-55
TC217183 weakly similar to GB|AAA34420.1|171053|YSCAMD AMP deami... 116 2e-38
TC221806 96 2e-35
BI424613 106 4e-23
CA852710 41 0.002
BU927072 40 0.003
BM892317 40 0.004
TC214360 similar to UP|Q9MBF3 (Q9MBF3) Glycine-rich RNA-binding ... 38 0.020
BM085018 similar to GP|14253159|emb VMP3 protein {Volvox carteri... 37 0.035
TC210294 37 0.035
BI893493 homologue to PIR|T01259|T012 AMP deaminase homolog F16M... 35 0.13
TC219974 weakly similar to PIR|T47938|T47938 RING finger protein... 35 0.17
TC211881 similar to PIR|T48135|T48135 nucleotide sugar epimerase... 35 0.17
TC219976 similar to UP|OAZ_HUMAN (P54368) Ornithine decarboxylas... 33 0.39
TC214257 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 33 0.39
TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F2... 33 0.39
>TC208807 similar to UP|Q9NGX0 (Q9NGX0) AMP deaminase, partial (31%)
Length = 892
Score = 585 bits (1509), Expect = e-167
Identities = 286/294 (97%), Positives = 290/294 (98%)
Frame = +3
Query: 313 EELFPVADATTFFTDLHQILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKS 372
EELFPVADATTFFTDLH ILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKS
Sbjct: 9 EELFPVADATTFFTDLHHILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKS 188
Query: 373 APHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLREVFESL 432
APHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTL EVF+SL
Sbjct: 189 APHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLEEVFKSL 368
Query: 433 DLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGELTK 492
DLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGELTK
Sbjct: 369 DLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLGELTK 548
Query: 493 QVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNDLYSENVVWLIQLPRLYNIYKD 552
QVFSDL ASKYQMAEYRISIYGRKQSEWDQLASWIVNNDLYSENVVWLIQLPRLYN+YK+
Sbjct: 549 QVFSDLAASKYQMAEYRISIYGRKQSEWDQLASWIVNNDLYSENVVWLIQLPRLYNVYKE 728
Query: 553 MGIVTSFQNMLDNIFIPLFEVTVDPDSHPQLHVFLKQVVGLDLVDDESKPERRP 606
MGIVTSFQNMLDNIFIPLFEVTV+PDSHPQLHVFLKQVVGLDLVDDESKP RRP
Sbjct: 729 MGIVTSFQNMLDNIFIPLFEVTVNPDSHPQLHVFLKQVVGLDLVDDESKPXRRP 890
>TC217182 weakly similar to UP|Q76NQ9 (Q76NQ9) CG32626-PB, partial (30%)
Length = 1085
Score = 424 bits (1091), Expect = e-119
Identities = 201/212 (94%), Positives = 206/212 (96%)
Frame = +3
Query: 603 ERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHAGEAGDI 662
ERRPTKHMPTP QWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPH+ EAGDI
Sbjct: 6 ERRPTKHMPTPEQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSREAGDI 185
Query: 663 DHLAATFLTAHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPVFFL 722
DHLAATFLTAHNIAHGINL+KSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNP P+FFL
Sbjct: 186 DHLAATFLTAHNIAHGINLKKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFL 365
Query: 723 RGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSH 782
RGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSH
Sbjct: 366 RGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKSH 545
Query: 783 WIGKEYYKRGPNGNDIHRTNVPHIRLEFRDTV 814
WIGKEY+K GP GNDI RTNVPHIRLEFRDT+
Sbjct: 546 WIGKEYFKSGPRGNDIQRTNVPHIRLEFRDTI 641
>TC222250 similar to UP|Q7SH02 (Q7SH02) Probable AMP deaminase, partial (10%)
Length = 1059
Score = 214 bits (544), Expect(2) = 1e-87
Identities = 99/108 (91%), Positives = 105/108 (96%)
Frame = +1
Query: 364 DREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYL 423
+REFLAQK APHRDFYN+RKVDTH+HHSACMNQKHL+RFIKSKLRKE DEVVIFRDG Y+
Sbjct: 712 NREFLAQKGAPHRDFYNIRKVDTHIHHSACMNQKHLVRFIKSKLRKESDEVVIFRDGKYM 891
Query: 424 TLREVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL 471
TL+EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL
Sbjct: 892 TLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRL 1035
Score = 129 bits (324), Expect(2) = 1e-87
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 9/248 (3%)
Frame = +2
Query: 115 SFKR--NIIRPTSPKSPVASASAFESVEGSDDEDNLTDTKHDTTYLHTNGNVGGEGKNPY 172
S+KR ++ R +P+SP + FES E SD+E+ + + +T G P
Sbjct: 29 SYKRIGSVGRIMTPRSP--GRTTFESAEDSDEEEIQLADDNRIPFSNTYGLDSNVCNLP- 199
Query: 173 ETLPNHVNTNGEQMAITASSMIRSHSISGDLHGVQ---PDPIAADILRKEPEQEIFAR-- 227
+P V QM AS +++ + HG+ P +A D + +FA
Sbjct: 200 -AVPFRVEDANNQMYGEASKEVKAGADMNG-HGITDSTPVHVAGDDI-------VFANNV 352
Query: 228 --LRITPMEAPSPDEIESYVILQECLEMRKRYIFKEAVAPWEKEVISDPSTPKPNLEPFF 285
R T E + +E E +++ECL++RK+Y++K+ PW+ E + + N +P+
Sbjct: 353 LPTRNTAHETTNIEEEEVCKMIRECLDLRKKYVYKDV--PWKTEPV------ETNSDPYH 508
Query: 286 YAPEGKSDHYFEMQDGVIHVYPNKNSNEELFPVADATTFFTDLHQILRVIAAGNIRTLCH 345
+ P + H+F M+DGVIHVY +K EELFPVA +T FFTD+H IL+V++ GN+RT C+
Sbjct: 509 FEPVEATSHHFRMEDGVIHVYASKTDTEELFPVASSTRFFTDMHYILKVMSIGNVRTSCY 688
Query: 346 HRLNLLEQ 353
HRL LE+
Sbjct: 689 HRLRFLEE 712
>BU761715
Length = 445
Score = 252 bits (644), Expect = 4e-67
Identities = 115/136 (84%), Positives = 126/136 (92%)
Frame = +1
Query: 543 LPRLYNIYKDMGIVTSFQNMLDNIFIPLFEVTVDPDSHPQLHVFLKQVVGLDLVDDESKP 602
LPRLYN+YK+MGIVTSFQN+LDN+FIPLFEV VDP+SHPQLH+FLKQVVG DLVDDESKP
Sbjct: 37 LPRLYNVYKNMGIVTSFQNILDNVFIPLFEVAVDPNSHPQLHLFLKQVVGFDLVDDESKP 216
Query: 603 ERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHAGEAGDI 662
ERRPTKHMPTP++WTN FNPA+SYY+YY YANLYTLNKLRESKGMTTIK RPH GEAGD
Sbjct: 217 ERRPTKHMPTPSEWTNEFNPAYSYYLYYYYANLYTLNKLRESKGMTTIKLRPHCGEAGDS 396
Query: 663 DHLAATFLTAHNIAHG 678
DHLAA FL HNI+HG
Sbjct: 397 DHLAAAFLLCHNISHG 444
>BM086009
Length = 429
Score = 214 bits (544), Expect = 2e-55
Identities = 111/143 (77%), Positives = 123/143 (85%), Gaps = 5/143 (3%)
Frame = +3
Query: 78 TAIAGGVEG----NGLMHDEGIPVGLPRLQTLREGKSANNGSFKRNIIRPTSPKSPVASA 133
TAI+GG +G NG +H +GIPVGLPRL TLREGKS+ +GSFKR+++RPTSPKSPVASA
Sbjct: 3 TAISGGFDGEEKRNGPVHVDGIPVGLPRLHTLREGKSSQSGSFKRSLLRPTSPKSPVASA 182
Query: 134 SAFESVEGSDDEDNLT-DTKHDTTYLHTNGNVGGEGKNPYETLPNHVNTNGEQMAITASS 192
SAFESVEGSDDEDN+T K DTTYLHTNG V EGK P+ETLPNHVN NGEQMAIT S
Sbjct: 183 SAFESVEGSDDEDNMTGKVKLDTTYLHTNGTVVPEGKIPFETLPNHVNANGEQMAIT-PS 359
Query: 193 MIRSHSISGDLHGVQPDPIAADI 215
MIRSHS+SGDLHGVQPDPIAADI
Sbjct: 360 MIRSHSVSGDLHGVQPDPIAADI 428
>TC217183 weakly similar to GB|AAA34420.1|171053|YSCAMD AMP deaminase
{Saccharomyces cerevisiae;} , partial (10%)
Length = 735
Score = 116 bits (291), Expect(2) = 2e-38
Identities = 52/56 (92%), Positives = 53/56 (93%)
Frame = +3
Query: 759 SCDLCEIARNSVYQSGFSHALKSHWIGKEYYKRGPNGNDIHRTNVPHIRLEFRDTV 814
SCDLCEIARNSVYQSGFSHALKSHWIGKEYYK GP GNDI RTNVPHIRLEFRDT+
Sbjct: 99 SCDLCEIARNSVYQSGFSHALKSHWIGKEYYKSGPRGNDIQRTNVPHIRLEFRDTI 266
Score = 62.0 bits (149), Expect(2) = 2e-38
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 727 VSLSTDDPLQIHLTKEPLVEEYSIAASVWKLS 758
VSLSTDDPLQ +LTKEPLVEEYSIAASVWKLS
Sbjct: 2 VSLSTDDPLQXYLTKEPLVEEYSIAASVWKLS 97
>TC221806
Length = 657
Score = 95.5 bits (236), Expect(2) = 2e-35
Identities = 51/80 (63%), Positives = 58/80 (71%), Gaps = 10/80 (12%)
Frame = -2
Query: 1 MDAHAVHLAMAALFGASIVAVSAYYMHRKTLTELLEFARTVEPEGDSDGG---------- 50
MD HAVHLA+AA+ GAS+VAVSAYYMHRKTL +LLEFARTVE E D GG
Sbjct: 440 MDTHAVHLALAAIVGASVVAVSAYYMHRKTLAQLLEFARTVEREADGGGGSDTEPPTAHL 261
Query: 51 ERRRGGSKRRNGGGGGYRRG 70
++R G S+RR G GGYRRG
Sbjct: 260 KKRLGSSRRR--GNGGYRRG 207
Score = 72.8 bits (177), Expect(2) = 2e-35
Identities = 39/68 (57%), Positives = 49/68 (71%), Gaps = 4/68 (5%)
Frame = -3
Query: 71 SGSLPDVTAIAGGVEG----NGLMHDEGIPVGLPRLQTLREGKSANNGSFKRNIIRPTSP 126
S SLPDVTAI GG +G NG +H + IPVG R+ TL EGKS+ +GSFKR+++RP
Sbjct: 205 SASLPDVTAIFGGFDGEEKRNGPVHVDXIPVGXXRVHTLXEGKSS*SGSFKRSLLRPIXS 26
Query: 127 KSPVASAS 134
KSP ASA+
Sbjct: 25 KSPGASAN 2
>BI424613
Length = 455
Score = 106 bits (265), Expect = 4e-23
Identities = 46/53 (86%), Positives = 50/53 (93%)
Frame = +2
Query: 589 QVVGLDLVDDESKPERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKL 641
QVVG LVDDESKPERRPTKHMPTPA+WTN FNPA+SYY+YYCYANLYTLNK+
Sbjct: 2 QVVGFALVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYLYYCYANLYTLNKV 160
>CA852710
Length = 615
Score = 40.8 bits (94), Expect = 0.002
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = -3
Query: 45 GDSDGGERRRGGSKR-RNGGG----GGYRRGSGSLPDV---TAIAGGVEGNGLMHDEGIP 96
GD D G RR GG + RNGGG GG R SG L + A V +GL HD G
Sbjct: 322 GDGDVGGRRSGGGRNLRNGGGGGGLGGLFRASGHLHGLRVGNAELAVVLRDGLEHDRG-- 149
Query: 97 VGLPRLQTLREGKSANNG 114
+ RL L G+S+++G
Sbjct: 148 -AVLRLLLLHRGRSSSSG 98
>BU927072
Length = 314
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -2
Query: 45 GDSDGGERRRGGSKRRNGGGGGYRRGSG 72
G GG RRRG S RNGGG G+RRG G
Sbjct: 238 GGGGGGRRRRGRSGFRNGGGSGWRRGGG 155
>BM892317
Length = 437
Score = 40.0 bits (92), Expect = 0.004
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +1
Query: 5 AVHLAMAALFGASIVAVSAYYMHRKTLTELL 35
++HLA+AAL GAS +A+SA+Y+HR T+ +L
Sbjct: 178 SLHLAIAALLGASFMALSAFYIHRHTVDHVL 270
>TC214360 similar to UP|Q9MBF3 (Q9MBF3) Glycine-rich RNA-binding protein,
partial (44%)
Length = 630
Score = 37.7 bits (86), Expect = 0.020
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = +2
Query: 45 GDSDGGERRRGGSKRRNGGGGGYRRGSGSLPDVTAIAGGVEGNGLMHDEG 94
G GG RR G RNGGGGGY G G GG G D G
Sbjct: 29 GGYGGGGGRREGGYNRNGGGGGYGGGGGGYGGGGGYGGGGRDRGYGGDGG 178
>BM085018 similar to GP|14253159|emb VMP3 protein {Volvox carteri f.
nagariensis}, partial (2%)
Length = 430
Score = 37.0 bits (84), Expect = 0.035
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = +2
Query: 5 AVHLAMAALFGASIVAVSAYYMHRKT----LTELLEFAR--TVEPEGDSDGGERRRGGSK 58
++HLAMAAL S +A+SA+++HR+T L L+E R DSD + R G
Sbjct: 158 SLHLAMAALLVFSFMALSAFFIHRRTVDHVLHRLVELRRKPLATSSDDSDDDDDDRTGFG 337
Query: 59 RRNG 62
NG
Sbjct: 338 DDNG 349
>TC210294
Length = 769
Score = 37.0 bits (84), Expect = 0.035
Identities = 28/88 (31%), Positives = 37/88 (41%), Gaps = 11/88 (12%)
Frame = -1
Query: 63 GGGGYRRGSGSLPDVTAIAGGVEGNG----LMHDEGIPVGLPRLQTLREGKSANNGSF-- 116
GGGG G G+ P GG+ G D GI G R+ T REG S +G
Sbjct: 460 GGGGISTG*GTSPFCFGRGGGITTGGDRVLASRDGGITTGGERVSTSREGDSIESGRLSL 281
Query: 117 -----KRNIIRPTSPKSPVASASAFESV 139
KR ++ S S +A A F ++
Sbjct: 280 SPSKPKRGMLVSVSSSSGLAQAFPFRNL 197
>BI893493 homologue to PIR|T01259|T012 AMP deaminase homolog F16M14.21 -
Arabidopsis thaliana, partial (2%)
Length = 426
Score = 35.0 bits (79), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 800 RTNVPHIRLEFRDTV 814
RTNVPHIRLEFRDTV
Sbjct: 422 RTNVPHIRLEFRDTV 378
>TC219974 weakly similar to PIR|T47938|T47938 RING finger protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(64%)
Length = 690
Score = 34.7 bits (78), Expect = 0.17
Identities = 30/86 (34%), Positives = 37/86 (42%), Gaps = 3/86 (3%)
Frame = -3
Query: 36 EFARTVEPEGDSDGGERRRG---GSKRRNGGGGGYRRGSGSLPDVTAIAGGVEGNGLMHD 92
E AR E ++GG+RRR G +R GGG G RRGS A GG G +
Sbjct: 304 ESARVAEA---AEGGQRRRNRCRGGRRCGGGGRGRRRGS------AATRGGKARGGTFSE 152
Query: 93 EGIPVGLPRLQTLREGKSANNGSFKR 118
P TLRE S+ + R
Sbjct: 151 PAAP------GTLRENPSSGA*DYTR 92
>TC211881 similar to PIR|T48135|T48135 nucleotide sugar epimerase-like
protein - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (23%)
Length = 529
Score = 34.7 bits (78), Expect = 0.17
Identities = 33/87 (37%), Positives = 37/87 (41%), Gaps = 2/87 (2%)
Frame = -1
Query: 2 DAHAVHLAMA-ALFGASIVAVSAYYMHRKTLTELLEFARTVEPEGDSDGGERRRGGSKRR 60
DA AV A+A AL G +VAV T L E EGD E G + R
Sbjct: 514 DAGAVEEALAGALEGGVVVAVEVVEADDTVATAL-------EGEGDVGADEAGGSGDEDR 356
Query: 61 NGGGGGYRRGSG-SLPDVTAIAGGVEG 86
GGGG G G +L V A G EG
Sbjct: 355 EAGGGGAASGLGDALFPVGAAPGVAEG 275
>TC219976 similar to UP|OAZ_HUMAN (P54368) Ornithine decarboxylase antizyme
(ODC-Az), partial (6%)
Length = 1046
Score = 33.5 bits (75), Expect = 0.39
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = -2
Query: 63 GGGGYRRGSGSLPDVTAIAGGVEGNG----LMHDEGIPVGLPRLQTLREGKSANNGSFK- 117
GGGG G G+ P GG+ G D GI G R+ R G S +G +
Sbjct: 511 GGGGIATG*GTCPFCFGRGGGITAGGDRVSASRDGGITTGGDRVSASRVGGSIESGRIRG 332
Query: 118 RNIIRPTSPK 127
R + P+ PK
Sbjct: 331 RLSLSPSKPK 302
>TC214257 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (7%)
Length = 607
Score = 33.5 bits (75), Expect = 0.39
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 45 GDSDGGERRRGGSK--RRNGGGGGYRRGSG 72
G GG RR GG RNGGGGGY G G
Sbjct: 14 GGYGGGGRREGGGGGYNRNGGGGGYGGGGG 103
Score = 32.3 bits (72), Expect = 0.86
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +2
Query: 48 DGGERRRGGSKRRNGGGGGYRRGSGSLPDVTAIAGGVEGNG 88
D G GG RR GGGGGY R G GG G G
Sbjct: 2 DRGGGGYGGGGRREGGGGGYNRNGG--------GGGYGGGG 100
>TC208501 similar to GB|AAN31116.1|23506209|AY149962 At3g06130/F28L1_7
{Arabidopsis thaliana;} , partial (26%)
Length = 1081
Score = 33.5 bits (75), Expect = 0.39
Identities = 25/72 (34%), Positives = 32/72 (43%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 GDSDGGERRRGGSKRRNGGGGGYRRGSGSLPDVTAIAGGV-EG-NGLMHDEGIPVGLPRL 102
G + G+ GG K GGG +G G+ + GGV EG NG + G G+P
Sbjct: 408 GGGNEGKNGNGGKKEGGGGGNNQTQGGGNKNNGGKNGGGVPEGKNGNNKNNGGGGGIPN- 584
Query: 103 QTLREGKSANNG 114
GK NNG
Sbjct: 585 NNGNGGKKGNNG 620
Score = 28.9 bits (63), Expect = 9.5
Identities = 15/46 (32%), Positives = 19/46 (40%), Gaps = 2/46 (4%)
Frame = +3
Query: 44 EGDSDGGERRRGGSKRRNGG--GGGYRRGSGSLPDVTAIAGGVEGN 87
EG G + +GG + NGG GGG G GG+ N
Sbjct: 450 EGGGGGNNQTQGGGNKNNGGKNGGGVPEGKNGNNKNNGGGGGIPNN 587
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,442,383
Number of Sequences: 63676
Number of extensions: 521163
Number of successful extensions: 4271
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 3827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4131
length of query: 814
length of database: 12,639,632
effective HSP length: 105
effective length of query: 709
effective length of database: 5,953,652
effective search space: 4221139268
effective search space used: 4221139268
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC140721.5