BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.5 + phase: 0
(250 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225286 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan pr... 350 3e-97
TC217373 weakly similar to UP|Q7Y250 (Q7Y250) Arabinogalactan pr... 334 3e-92
TC208218 weakly similar to UP|Q6J189 (Q6J189) Fasciclin-like AGP... 212 1e-55
TC219315 weakly similar to UP|Q6J190 (Q6J190) Fasciclin-like AGP... 210 4e-55
TC217020 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, pa... 210 6e-55
TC217372 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP... 205 1e-53
TC234339 similar to UP|Q6J196 (Q6J196) Fasciclin-like AGP 8, par... 195 1e-50
BQ094318 weakly similar to GP|21553523|gb arabinogalactan protei... 177 4e-45
TC204370 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g4... 170 6e-43
TC204373 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g4... 167 5e-42
TC217021 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, pa... 131 3e-31
TC215415 similar to UP|Q6J192 (Q6J192) Fasciclin-like AGP 12, pa... 112 2e-25
BI471377 101 4e-22
BE804797 95 3e-20
TC216483 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 92 2e-19
TC225828 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 92 3e-19
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 91 5e-19
TC227271 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-li... 87 7e-18
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 70 2e-14
TC235115 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP... 70 7e-13
>TC225286 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan protein
Pop14A9, partial (64%)
Length = 1207
Score = 350 bits (898), Expect = 3e-97
Identities = 186/264 (70%), Positives = 212/264 (79%), Gaps = 15/264 (5%)
Frame = +1
Query: 1 MVMMKH-PFLSFTLLLIVFFSSTTTLAQK-------------SPAPAPSTDTAPTDIIRI 46
MVMMKH P S LL+++F STTTLAQ + APAP PTDIIRI
Sbjct: 121 MVMMKHIPLFSLPLLIVLFSHSTTTLAQSPAAAPTAPATPSTAAAPAPVPSAPPTDIIRI 300
Query: 47 LKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQK 106
LKKAGGFTTLIRLLQ TQVS QINSQLL ++GGLTLFAPNDN+FSSLKPGFLNSL+D+QK
Sbjct: 301 LKKAGGFTTLIRLLQATQVSNQINSQLLTTSGGLTLFAPNDNAFSSLKPGFLNSLNDQQK 480
Query: 107 NKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSS-GNQVNMTTGIVNVTVG 165
N+LIQFHLLPT+VS+SNFDTLSNPVRTQAG++P RL LN+TSS GNQVNMTTG+VNVT+G
Sbjct: 481 NELIQFHLLPTYVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGVVNVTLG 660
Query: 166 GTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGA 225
GTVYTDHQLAVYQVDKVLLPRDFF AKPP PAPAPEK K SKKKS+DS A D +S A
Sbjct: 661 GTVYTDHQLAVYQVDKVLLPRDFFEAKPPVPAPAPEKAKGSKKKSADSTATTADDAESDA 840
Query: 226 VNVKQRRLMLVPVAVATIIVAIYS 249
++VKQR +M VAV + +A ++
Sbjct: 841 ISVKQRHVMW--VAVLALFIAAFT 906
>TC217373 weakly similar to UP|Q7Y250 (Q7Y250) Arabinogalactan protein,
partial (66%)
Length = 982
Score = 334 bits (856), Expect = 3e-92
Identities = 171/243 (70%), Positives = 199/243 (81%)
Frame = +2
Query: 1 MVMMKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLL 60
M+M KH S +LLL+V F+S AQ +PAP+PS+ APTDIIRILKKAGGFTTLIRLL
Sbjct: 59 MMMKKHLLFSLSLLLMVLFTS----AQTTPAPSPSS--APTDIIRILKKAGGFTTLIRLL 220
Query: 61 QTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVS 120
TTQVSTQIN+QLLNSN GLT+FAPNDN+F SLKPGFLNSL+D+QKN+LIQFH+LPTFVS
Sbjct: 221 TTTQVSTQINAQLLNSNNGLTVFAPNDNAFQSLKPGFLNSLNDQQKNELIQFHVLPTFVS 400
Query: 121 MSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVD 180
+SNFDTLSNPVRTQAGDDP RL LN+TSSGNQVN+TTG+VN TVGG+VY+DHQLA+YQVD
Sbjct: 401 ISNFDTLSNPVRTQAGDDPDRLALNITSSGNQVNLTTGVVNTTVGGSVYSDHQLAIYQVD 580
Query: 181 KVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAV 240
KVLLPRDFFV KPP PAPAP K K+S K S A D+DS A+++ L L +
Sbjct: 581 KVLLPRDFFVPKPPPPAPAPAKAKASSAKKSTEGPSSAADNDSAAISLNGIWLSLSVATI 760
Query: 241 ATI 243
A +
Sbjct: 761 AAV 769
>TC208218 weakly similar to UP|Q6J189 (Q6J189) Fasciclin-like AGP 15, partial
(46%)
Length = 1043
Score = 212 bits (539), Expect = 1e-55
Identities = 124/271 (45%), Positives = 169/271 (61%), Gaps = 29/271 (10%)
Frame = +2
Query: 3 MMKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPST-------------------------D 37
M + SF+L L++ SSTT +PA AP T D
Sbjct: 65 MKQATLFSFSLFLLL--SSTTMAISPAPAAAPKTPPTPKATAPSPKPLVPTLPQSPDSPD 238
Query: 38 TAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNS-NGGLTLFAPNDNSFSSLKPG 96
+ P DI RILKKA F+ LIRLL+TT++ INSQL+ + +GG+T+ AP+D++FS+LK G
Sbjct: 239 SVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAG 418
Query: 97 FLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMT 156
FLNSL++ QK +L+QFH+LP FVS SNFD+LSNPV+T AG DP RL LNV + GN VN++
Sbjct: 419 FLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNIS 598
Query: 157 TGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGG 216
TG+VN TV G VY+D++L +Y VDKVLLP DFF+ APA AP S K + D+
Sbjct: 599 TGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFITN-KAPASAPSTLAKSPKAAKDN--- 766
Query: 217 VAGDDDSGAVNVKQRR---LMLVPVAVATII 244
+ +DD N Q + + +V + AT++
Sbjct: 767 -SSEDDQEETNQHQNKSGAVSVVSIGGATLM 856
>TC219315 weakly similar to UP|Q6J190 (Q6J190) Fasciclin-like AGP 14, partial
(32%)
Length = 1223
Score = 210 bits (535), Expect = 4e-55
Identities = 120/215 (55%), Positives = 157/215 (72%), Gaps = 12/215 (5%)
Frame = +3
Query: 21 STTTLAQKSPAPAPSTDT----APT-DIIRILKKAGGFTTLIRLLQTTQVSTQINSQLL- 74
+T L +P+ AP+ T PT DI++IL+KA F+ L RLL+TTQ+ Q+NSQL+
Sbjct: 267 NTVPLVPVTPSGAPTPTTIIPKGPTIDIVQILRKAKRFSVLTRLLKTTQLINQLNSQLVT 446
Query: 75 NSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQ 134
+S+GGLTLFAP D++FS LK GFLNSL+D QK +L+QFH L + +S+SNFDTL+NPV+TQ
Sbjct: 447 SSSGGLTLFAPEDSAFSKLKAGFLNSLTDRQKVELLQFHTLSSVISISNFDTLTNPVQTQ 626
Query: 135 AGDDPYRLGLNVTS-SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFV-AK 192
AGDDP RL LNVT+ G+QV+M TG VN +V GTVY+D++LA+YQVDKVLLP D + +K
Sbjct: 627 AGDDPQRLQLNVTTYGGSQVSMATGAVNASVTGTVYSDNKLAIYQVDKVLLPLDLVLPSK 806
Query: 193 PPAPAPAPEKTKSSKKKSSDS----DGGVAGDDDS 223
PAPAPA + K +S DG V G+DDS
Sbjct: 807 APAPAPALARKGLPKADKGNSTAADDGTVDGNDDS 911
>TC217020 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial (66%)
Length = 815
Score = 210 bits (534), Expect = 6e-55
Identities = 122/248 (49%), Positives = 164/248 (65%), Gaps = 8/248 (3%)
Frame = +3
Query: 8 FLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVST 67
FL F L L +F T AQ +PAPA PT+I ++L+KAG FTT I+LL+ +Q++
Sbjct: 66 FLPF-LFLNIFIQ--TISAQVAPAPA-----GPTNITQVLEKAGQFTTFIKLLKASQIAD 221
Query: 68 QINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTL 127
+INSQL NSN GLT+FAP DN+FSSLK G LNS++ + + +LIQFH+LPT ++S F T
Sbjct: 222 RINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPTLYTISQFQTA 401
Query: 128 SNPVRTQAGD-DPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
SNP+ TQAG+ D LNVT+SGNQVN+TTG+V+ TV T+Y+D+QLAVYQVDKVLLP
Sbjct: 402 SNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDKVLLPM 581
Query: 187 DFFVAKPPA--PAPAPEKTKSSKKKSSDSDGGVAGDDD-----SGAVNVKQRRLMLVPVA 239
F A PA PA AP TK K + + +G D S AV++K+ + V
Sbjct: 582 KLFGAMAPAASPAEAPAPTKPEKNVRAGAADSPSGSSDTSADASSAVSLKRHTVEGVTFV 761
Query: 240 VATIIVAI 247
A +++ +
Sbjct: 762 AAVVVMIV 785
>TC217372 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial
(42%)
Length = 451
Score = 205 bits (522), Expect = 1e-53
Identities = 105/139 (75%), Positives = 119/139 (85%)
Frame = +2
Query: 1 MVMMKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLL 60
MVM K+ S +LLL+V F+S+ T PAPS + PTDIIRILKKAGGFTTLIRLL
Sbjct: 53 MVMKKNLLFSLSLLLMVLFTSSQT------TPAPSPSSTPTDIIRILKKAGGFTTLIRLL 214
Query: 61 QTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVS 120
TTQVSTQIN+QLLNSN GLT+FAPNDN+F SLKPGFLNSL+D+QKN+LIQFH+LPTFVS
Sbjct: 215 TTTQVSTQINAQLLNSNNGLTVFAPNDNAFQSLKPGFLNSLNDQQKNELIQFHVLPTFVS 394
Query: 121 MSNFDTLSNPVRTQAGDDP 139
+SNFDTLSNPVRTQAGDDP
Sbjct: 395 ISNFDTLSNPVRTQAGDDP 451
>TC234339 similar to UP|Q6J196 (Q6J196) Fasciclin-like AGP 8, partial (22%)
Length = 895
Score = 195 bits (496), Expect = 1e-50
Identities = 115/240 (47%), Positives = 152/240 (62%), Gaps = 22/240 (9%)
Frame = +3
Query: 32 PAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLN-SNGGLTLFAPNDNSF 90
P PS T TDI+++L++A F +RL++TTQ+ Q+NSQLL +GGLT+ AP+D +F
Sbjct: 18 PQPSGGT--TDIVQVLQQANSFNIFLRLMKTTQLINQLNSQLLTIKSGGLTILAPDDGAF 191
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
S LKPGFLNSLSD +K +L+QFH+LP FVS SNFDTL+NPVRT AG+ P ++ LNV S G
Sbjct: 192 SELKPGFLNSLSDGKKLELVQFHVLPDFVSASNFDTLTNPVRTLAGNKPGKVELNVISYG 371
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA--KPPAPAPA--------- 199
VN++TG VN T+ G +YTD LAVY+V KVLLP +F KP APAPA
Sbjct: 372 GSVNISTGAVNATMNGVIYTDKHLAVYRVGKVLLPSEFVATTKKPLAPAPALKPAPVTSA 551
Query: 200 --------PEKTKSSKK--KSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATIIVAIYS 249
PEK K S K +SS+S V SG V + M V + + + V +++
Sbjct: 552 NDVAEAPKPEKEKPSPKPEQSSESSTQVVPTVTSGGVRIGVSG-MWVSLVLGLVFVGVFA 728
>BQ094318 weakly similar to GP|21553523|gb arabinogalactan protein-like
{Arabidopsis thaliana}, partial (45%)
Length = 421
Score = 177 bits (449), Expect = 4e-45
Identities = 94/140 (67%), Positives = 113/140 (80%), Gaps = 2/140 (1%)
Frame = +1
Query: 69 INSQLLNS-NGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTL 127
+NSQLL S +GGLTLFAP D++FS LK GFLNSLSD QK +L+QFH L +F+S+SNFDTL
Sbjct: 1 LNSQLLTSGSGGLTLFAPEDSAFSKLKAGFLNSLSDRQKVELLQFHTLSSFISISNFDTL 180
Query: 128 SNPVRTQAGDDPYRLGLNVTS-SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
+NPV+TQAGDDP RL LNVT+ G+QV+M TG VN +V GTVYTD++LA+YQVDKVLLP
Sbjct: 181 TNPVQTQAGDDPKRLQLNVTTFGGSQVSMATGAVNASVTGTVYTDNKLAIYQVDKVLLPL 360
Query: 187 DFFVAKPPAPAPAPEKTKSS 206
D V APAPAP K K +
Sbjct: 361 D-LVLPSEAPAPAPGKAKGA 417
>TC204370 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g44130/MLN1_5
{Arabidopsis thaliana;} , partial (59%)
Length = 1002
Score = 170 bits (430), Expect = 6e-43
Identities = 112/247 (45%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Frame = +3
Query: 10 SFTLLLIVF--FSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVST 67
SFTL+L++ F T AQ +PAPAPS ++ IL+K G +TTLI+LL+ TQ T
Sbjct: 33 SFTLILLILTTFLMAQTQAQ-APAPAPS---GAVNLTAILEKGGQYTTLIKLLKDTQQLT 200
Query: 68 QINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTL 127
QI SQL +++ G TLFAP DN+F SLKPG LN LSD++K KLI FH+ P + ++S+ T+
Sbjct: 201 QIESQLKSNSQGFTLFAPTDNAFQSLKPGALNDLSDDKKVKLILFHVTPKYYTISDLLTV 380
Query: 128 SNPVRTQAGDDPYRLGLNVT-SSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
SNPVRTQA ++ GLN T GNQVN++TG+V + + LAVYQVDKVLLP
Sbjct: 381 SNPVRTQATEEEGTWGLNFTGQGGNQVNISTGVVQTQLNNALREKFPLAVYQVDKVLLPL 560
Query: 187 DFF---VAKPPAPAPAPEKTKSSKKKSSDSDGGVA----GD-DDSGAVNVKQRRLMLVPV 238
+ F + AP+P+ +KS+ + S G A GD D+ A N + LV V
Sbjct: 561 ELFGTTKTTHSSEAPSPKGSKSTPEIPSVGKAGGAPSPHGDKKDTNAANGRNVAFGLV-V 737
Query: 239 AVATIIV 245
+A I +
Sbjct: 738 GLALICI 758
>TC204373 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g44130/MLN1_5
{Arabidopsis thaliana;} , partial (60%)
Length = 1283
Score = 167 bits (422), Expect = 5e-42
Identities = 101/224 (45%), Positives = 140/224 (62%), Gaps = 8/224 (3%)
Frame = +3
Query: 12 TLLLIVFFSSTTTLAQ-KSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQIN 70
TL+L+ + AQ ++PAP+PS ++ IL+K G +TTL++LL+ TQ TQI
Sbjct: 69 TLILLTLTTFLIAQAQAQAPAPSPS---GAVNLTAILEKGGQYTTLMKLLKDTQQLTQIE 239
Query: 71 SQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNP 130
SQL +++ G TLFAP DN+F SLKPG LN LSD+QK KLI FH+ P + ++S+ T+SNP
Sbjct: 240 SQLKSNSQGFTLFAPTDNAFQSLKPGALNKLSDDQKVKLILFHVTPKYYTISDLLTVSNP 419
Query: 131 VRTQAGDDPYRLGLNVT-SSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFF 189
VRTQA + GLN T GNQVN++TG+V + + LAVYQVDKVLLP + F
Sbjct: 420 VRTQATEKEGTWGLNFTGQGGNQVNISTGVVQTQLNNPLREKFPLAVYQVDKVLLPLELF 599
Query: 190 ---VAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDD---DSGAVN 227
+ + AP+P+ +KS+ + S G A D D+ A N
Sbjct: 600 GTTKTRASSAAPSPKGSKSTPEIPSVGKAGSAPSDSPKDTNAAN 731
>TC217021 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial (48%)
Length = 447
Score = 131 bits (329), Expect = 3e-31
Identities = 72/139 (51%), Positives = 97/139 (68%), Gaps = 1/139 (0%)
Frame = +1
Query: 10 SFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQI 69
+F LL + T AQ +PAPA PT+I ++L+KAG FTT I+LL+ +Q++ +I
Sbjct: 46 NFLPLLFLNIFIQTISAQVAPAPA-----GPTNITQVLEKAGQFTTFIKLLKASQIADRI 210
Query: 70 NSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSN 129
NSQL NSN GLT+FAP DN+FSSLK G LNS++ + + +LIQFH+LPT ++S F T SN
Sbjct: 211 NSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPTLYTISQFQTASN 390
Query: 130 PVRTQAGD-DPYRLGLNVT 147
P+ TQAG+ D LNVT
Sbjct: 391 PLHTQAGNSDDGEYPLNVT 447
>TC215415 similar to UP|Q6J192 (Q6J192) Fasciclin-like AGP 12, partial (79%)
Length = 1205
Score = 112 bits (279), Expect = 2e-25
Identities = 68/191 (35%), Positives = 102/191 (52%), Gaps = 3/191 (1%)
Frame = +2
Query: 13 LLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQ 72
LL F+ T + SP PAP+ ++ +L AG F T + L++T+V +Q
Sbjct: 263 LLFSSAFAKTASPPSLSPTPAPAPAPDFVNLTELLSVAGPFHTFLGYLESTKVIDTFQNQ 442
Query: 73 LLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLS--NP 130
N+ G+T+F P D++F+++K L++L+ Q ++I FH LP F S++ F +LS +
Sbjct: 443 ANNTEEGITIFVPKDSAFNAIKKTTLSNLTSNQLKQVILFHALPHFYSLAEFTSLSQTSS 622
Query: 131 VRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFV 190
T AG D LN T V++ +G V V+ +A+YQVDKVLLP
Sbjct: 623 TPTFAGGD---YTLNFTDDSGTVHINSGWSKTKVSSAVHATDPVAIYQVDKVLLPEAILG 793
Query: 191 AK-PPAPAPAP 200
PPAPAPAP
Sbjct: 794 TNIPPAPAPAP 826
>BI471377
Length = 421
Score = 101 bits (251), Expect = 4e-22
Identities = 59/123 (47%), Positives = 74/123 (59%), Gaps = 4/123 (3%)
Frame = +2
Query: 128 SNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRD 187
SNPV T A D P LNVT+ GN VN++TG+VN T+ G VYTD LA+Y VDKVL+P D
Sbjct: 2 SNPVLTLASDSPTGYQLNVTAYGNSVNISTGVVNATLTGIVYTDKTLAIYHVDKVLIPLD 181
Query: 188 FFVAKPPAPAPAPEKTKSSKKKSS---DSDGGVAGDDDSGAVN-VKQRRLMLVPVAVATI 243
F KP APAPA K + K+++ D D A D SGA++ V + LV VA +
Sbjct: 182 FSKPKPIAPAPAVAKAPKADKENASAEDDDQAQAAKDSSGAMSLVSTQGTTLVSFGVALL 361
Query: 244 IVA 246
A
Sbjct: 362 AAA 370
>BE804797
Length = 370
Score = 95.1 bits (235), Expect = 3e-20
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = +2
Query: 56 LIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLL 115
L L + Q+S +I QL S+ GLT FA D++FSSLK LN ++ + + +LIQ H+L
Sbjct: 5 LSELRKA*QISDRIRYQLNISDQGLTGFALTDHAFSSLKARTLNYINSQDQMQLIQIHIL 184
Query: 116 PTFVSMSNFDTLSNPVRTQAGD-DPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQL 174
PT ++S T SNP+ TQAG+ D LNV + NQVN+TTG+V+ TV ++Y+D+
Sbjct: 185 PTLYTISQLLTASNPLHTQAGNSDDGEYPLNVNTLWNQVNVTTGVVDTTVSNSIYSDNPT 364
Query: 175 AV 176
V
Sbjct: 365 CV 370
>TC216483 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (31%)
Length = 1084
Score = 92.4 bits (228), Expect = 2e-19
Identities = 64/225 (28%), Positives = 104/225 (45%), Gaps = 8/225 (3%)
Frame = +2
Query: 9 LSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQ 68
+ + + +I + A ++PAPAP+ ++ I+ K G L
Sbjct: 62 IPYNISVIQISKVLPSAAAEAPAPAPTQQ----NLTNIMSKHGCKVFADTLSAQPDALNT 229
Query: 69 INSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLS 128
N L +GGLT+F P D++F + P F N L+ K L++FH +P + S + + +
Sbjct: 230 FNDNL---DGGLTVFCPLDDAFKAFLPKFKN-LTKSGKAALLEFHAVPVYQSKATLKSNN 397
Query: 129 NPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDF 188
T A D + V + G V + T + + T+ +H LA++ ++KVL P++
Sbjct: 398 GLQNTLATDGANKFDFTVQNDGEDVTLKTKLTTAKITDTLIDEHPLAIFAINKVLXPKEL 577
Query: 189 FVAKPPAPAPAPEKT--------KSSKKKSSDSDGGVAGDDDSGA 225
F + APAPAPE + K KKK +D A DDS A
Sbjct: 578 FKGEAEAPAPAPEPSAADAPAPAKKGKKKKKAAD---APADDSDA 703
>TC225828 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (41%)
Length = 1108
Score = 91.7 bits (226), Expect = 3e-19
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Frame = +3
Query: 31 APAPSTDTAPTDIIRILKKAG--GFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDN 88
A AP+ + D+I I+ K G F L+R + + N +GGLT+F P D+
Sbjct: 69 AEAPTAAPSAIDLISIMSKQGCKAFADLLRGSKALPAFKE------NVDGGLTVFCPTDS 230
Query: 89 SFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTS 148
+ S P + N L++ QK L+ +H P + S+ + + + T A + + V S
Sbjct: 231 AISGFAPKYKN-LTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDFTVKS 407
Query: 149 SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA-----KPPAPAPAPEKT 203
G V++ T + ++ GT+ Y++++VL+PR+ F A + PA +P P K
Sbjct: 408 EGEDVSLKTKVNTASIVGTLIDQDPFVAYKINRVLMPRELFKASDALDQAPAESPKPAKK 587
Query: 204 KSSKKK---------------SSDSDGGVAGDDDSGAVNVKQRRLMLV 236
K + KK S DS+ A D DS V+ RL++V
Sbjct: 588 KKNAKKGSEDSDAADAPADGPSDDSEDQKAADQDSNGVSGLHVRLVMV 731
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 90.9 bits (224), Expect = 5e-19
Identities = 65/238 (27%), Positives = 110/238 (45%), Gaps = 21/238 (8%)
Frame = +1
Query: 31 APAPSTDTAPTDIIRILKKAG--GFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDN 88
A AP+ + D+I I+ K G F L+R S + S N +GGLT+F P D+
Sbjct: 535 AEAPTAAPSAIDLISIMSKQGCKAFADLLR------GSKALPSFKENVDGGLTVFCPTDS 696
Query: 89 SFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTS 148
+ S P + N L++ QK L+ +H P + S+ + + + T A + + V S
Sbjct: 697 AVSGFAPKYKN-LTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDFTVQS 873
Query: 149 SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFF----VAKPPAPAPAPEKTK 204
G V++ T + ++ GT+ Y++++VL+PR+ F A PA +P P K K
Sbjct: 874 EGEDVSLKTKVNTASIVGTLIDQDPFVAYKINRVLMPRELFKASDAADAPAQSPKPAKKK 1053
Query: 205 SSKKKSS---------------DSDGGVAGDDDSGAVNVKQRRLMLVPVAVATIIVAI 247
+ K +S DS+ A D+DS V+ R +V ++ +A+
Sbjct: 1054NKNKNNSHAADAPADGPSDDDADSEDQKAADEDSNGVSGLHVRFFMVFFSLIMAFLAL 1227
>TC227271 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-like
arabinogalactan protein FLA8 {Arabidopsis thaliana;} ,
partial (75%)
Length = 1213
Score = 87.0 bits (214), Expect = 7e-18
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Frame = +2
Query: 31 APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSF 90
AP PS D +I +++KAG T L+ + + S ++ GLT+FAPND +F
Sbjct: 203 APPPSADV---NITALIEKAG-CKTFASLISSNGLIKTFQS---TADKGLTIFAPNDEAF 361
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
+ L+ L++ + L+Q+H ++ + + T + + T A + + L V+ +G
Sbjct: 362 KAKGVPDLSKLTNAEVVSLLQYHAAAKYLPVGSLKTTKDSINTLASNGAGKFDLTVSVAG 541
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKP-PAPAPAPEKTKSSKKK 209
+ + + TG+ + + T+ L++Y VD VLLP + F P PAPAP P S
Sbjct: 542 DSLTLHTGVDSSRIAETILDSTPLSIYSVDSVLLPPELFAKSPSPAPAPGPVTAPSPSPV 721
Query: 210 SSDSD 214
S+ S+
Sbjct: 722 STPSE 736
>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (58%)
Length = 1213
Score = 69.7 bits (169), Expect(2) = 2e-14
Identities = 47/188 (25%), Positives = 83/188 (44%)
Frame = +3
Query: 9 LSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQ 68
+ + + +I + A ++PAPAP+ ++ I+ K G L
Sbjct: 513 IPYNISVIQISKVLPSAAAEAPAPAPTQQ----NLTNIMSKHGCKVFADALSAQPDALNT 680
Query: 69 INSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLS 128
N L +GGLT+F P D++F + P F N L+ K L++FH +P + S + + +
Sbjct: 681 FNDNL---DGGLTVFCPLDDAFKAFLPKFKN-LTKSGKVALLEFHGVPVYQSKATLKSNN 848
Query: 129 NPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDF 188
T A D + V + G V + T + + T+ + LA++ + KVL P++
Sbjct: 849 GLQNTLATDGANKFDFTVQNDGEDVTLKTKLTTAKITDTLIDEQPLAIFAISKVLQPKEL 1028
Query: 189 FVAKPPAP 196
F P
Sbjct: 1029FKGGESXP 1052
Score = 25.8 bits (55), Expect(2) = 2e-14
Identities = 16/46 (34%), Positives = 20/46 (42%), Gaps = 14/46 (30%)
Frame = +2
Query: 195 APAPAPEKTKSSKKKSSDSD--------------GGVAGDDDSGAV 226
A APAP K KKK++D+ V DD +GAV
Sbjct: 1076 ADAPAPAKNGKKKKKAADAPADDSDAPADSPDDAADVTADDSNGAV 1213
>TC235115 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial
(15%)
Length = 441
Score = 70.5 bits (171), Expect = 7e-13
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 19/94 (20%)
Frame = +3
Query: 11 FTLLLIVFFSS---TTTLAQKSPAPAPS---------------TDTAPTDIIRILKKAGG 52
F+LLL + F S TTTLAQ +P APS +D++P DIIRIL+KA
Sbjct: 162 FSLLLFMSFCSVYLTTTLAQ-APDTAPSKPIVQTLPQSPSSDTSDSSPDDIIRILRKAKS 338
Query: 53 FTTLIRLLQTTQVSTQINSQLLN-SNGGLTLFAP 85
F LIRLL+TTQ+ QIN+QL+ +GGLT+FAP
Sbjct: 339 FNVLIRLLKTTQLINQINAQLITIRSGGLTIFAP 440
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,445,227
Number of Sequences: 63676
Number of extensions: 132264
Number of successful extensions: 1979
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of query: 250
length of database: 12,639,632
effective HSP length: 95
effective length of query: 155
effective length of database: 6,590,412
effective search space: 1021513860
effective search space used: 1021513860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC139344.5