BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138526.4 + phase: 0
(308 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%) 376 e-105
TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete 363 e-101
TC215201 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly prote... 246 1e-65
TC210455 homologue to UP|Q39892 (Q39892) Nucleosome assembly pro... 229 9e-61
TC215203 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly prote... 123 1e-28
TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%) 119 1e-27
TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%) 109 1e-24
TC228249 similar to UP|Q9M9V0 (Q9M9V0) F6A14.10 protein, partial... 109 2e-24
TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly pro... 106 2e-23
TC215448 similar to UP|P93488 (P93488) NAP1Ps, partial (28%) 101 5e-22
TC223182 similar to UP|Q84UX6 (Q84UX6) Nucleosome/chromatin asse... 89 2e-18
AI495777 79 3e-15
TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembl... 73 1e-13
TC207954 similar to UP|Q9M9V0 (Q9M9V0) F6A14.10 protein, partial... 64 1e-10
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 58 5e-09
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 57 1e-08
BE822052 similar to GP|4557063|gb|A expressed protein {Arabidops... 54 7e-08
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 53 2e-07
TC207955 weakly similar to UP|Q94F78 (Q94F78) Nucleosome/chromat... 52 3e-07
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 52 4e-07
>TC215449 similar to UP|P93488 (P93488) NAP1Ps, partial (97%)
Length = 1495
Score = 376 bits (966), Expect = e-105
Identities = 198/321 (61%), Positives = 242/321 (74%), Gaps = 16/321 (4%)
Frame = +2
Query: 2 IQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPL 61
IQ+L Q L+ L SP V KR+EVL+EIQ +HD+L+AKFFEERAALEAKYQ LYQPL
Sbjct: 224 IQSLAGQHSDILESL--SPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPL 397
Query: 62 YTKRYEIVNGLAEVE-------GADIDEPEVKGVPYFWLVALQNNDEIADEITERDEDAL 114
YTKRYEIVNG EVE D +E + KGVP FWL A++NN+ +A+EI+ERDE AL
Sbjct: 398 YTKRYEIVNGTTEVEEGAVKETAPDNEEDQEKGVPAFWLTAMKNNEVLAEEISERDEGAL 577
Query: 115 KYLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMVDEDEFIMEKAIGTEIEWLP 174
KYLKDIK++R P+GFKL+FFFD+NPYF+N++LTKTYHM+DEDE I+EKAIGTEI+W P
Sbjct: 578 KYLKDIKWSRIENPKGFKLDFFFDTNPYFTNSVLTKTYHMIDEDEPILEKAIGTEIQWHP 757
Query: 175 GKSLTE-------KKDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMGVDEEADEELQNEM 227
GK LT+ KK AK +TE +SFFNFFN ++P+D +DE+ EELQN+M
Sbjct: 758 GKCLTQKILKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDVAEELQNQM 937
Query: 228 EHDYDIGSTIRDKIIPNAVSWYTGEASDG-ESGDLDDDDDDED-EEDDEEEVEVEKEEED 285
E DYDIGSTIRDKIIP+AVSW+TGEA G E GDL+DD+DDED EEDD+EE E+E+ED
Sbjct: 938 EQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGDLEDDEDDEDIEEDDDEE---EEEDED 1108
Query: 286 DNYGLDDDEEDDNEDVNNPKK 306
DDD+EDD E+ KK
Sbjct: 1109-----DDDDEDDEEESKTKKK 1156
>TC218918 UP|Q39892 (Q39892) Nucleosome assembly protein 1, complete
Length = 1507
Score = 363 bits (931), Expect = e-101
Identities = 186/311 (59%), Positives = 236/311 (75%), Gaps = 13/311 (4%)
Frame = +1
Query: 2 IQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPL 61
IQ+L L+ L SP V KR+E L+EIQ +HD+L+A F +ER ALEAKYQ LYQPL
Sbjct: 187 IQSLAGAHSDVLETL--SPNVRKRVESLREIQGKHDELEADFLKEREALEAKYQKLYQPL 360
Query: 62 YTKRYEIVNGLAEVEGA------DIDEPEVKGVPYFWLVALQNNDEIADEITERDEDALK 115
YTKRYEIVNG+ EVEGA + +E + KGVP FWL A++NND +A+EI+ERDE ALK
Sbjct: 361 YTKRYEIVNGVTEVEGAANESTDESEENKEKGVPSFWLNAMENNDVLAEEISERDEGALK 540
Query: 116 YLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMVDEDEFIMEKAIGTEIEWLPG 175
+LKDIK++R P+GFKL+FFFD+NPYFSNT+LTKTYHM+DEDE I+EKAIGTEIEW PG
Sbjct: 541 FLKDIKWSRIENPKGFKLDFFFDTNPYFSNTVLTKTYHMIDEDEPILEKAIGTEIEWYPG 720
Query: 176 KSLTE-------KKDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMGVDEEADEELQNEME 228
K LT+ KK AK +TE +SFFNFF E+P+D +DE+ EELQN+ME
Sbjct: 721 KCLTQKVLKKKPKKGSKNAKPITKTESCESFFNFFKPPEVPEDDADIDEDLAEELQNQME 900
Query: 229 HDYDIGSTIRDKIIPNAVSWYTGEASDGESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNY 288
DYDIGST+RDKIIP+AVSW+TGEA+ G+ + +D +DDEDEE+DE+E E E+++ED+
Sbjct: 901 QDYDIGSTLRDKIIPHAVSWFTGEAAQGD--EFEDLEDDEDEEEDEDEDEDEEDDEDE-- 1068
Query: 289 GLDDDEEDDNE 299
DD+EEDD +
Sbjct: 1069--DDEEEDDTK 1095
>TC215201 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly protein 1-like
protein 1, partial (55%)
Length = 904
Score = 246 bits (627), Expect = 1e-65
Identities = 121/196 (61%), Positives = 153/196 (77%), Gaps = 12/196 (6%)
Frame = +3
Query: 102 IADEITERDEDALKYLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMVDEDEFI 161
+A+EITERDE +LKYLKDIK+ R +P+GFKLEF+FDSNPYF N++LTKTYHM+++D+ I
Sbjct: 6 LAEEITERDEGSLKYLKDIKWCRIDDPKGFKLEFYFDSNPYFKNSVLTKTYHMIEDDDPI 185
Query: 162 MEKAIGTEIEWLPGKSLTEK-------KDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMG 214
+EKAIGTEIEW PGK LT+K K AK +TEK +SFFNFFN E+P+D
Sbjct: 186 LEKAIGTEIEWHPGKCLTQKILKKKPRKGSKNAKPITKTEKCESFFNFFNPPEVPEDDDD 365
Query: 215 VDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEAS-----DGESGDLDDDDDDED 269
+DE+A EELQN ME DYDIGSTIRDKIIP+AVSW+TGEA+ D + D DD++ DED
Sbjct: 366 IDEDAVEELQNLMERDYDIGSTIRDKIIPHAVSWFTGEAAQSDFEDIDEVDYDDEEGDED 545
Query: 270 EEDDEEEVEVEKEEED 285
E++DE+E E E+EEE+
Sbjct: 546 EDEDEDEEEEEEEEEE 593
>TC210455 homologue to UP|Q39892 (Q39892) Nucleosome assembly protein 1,
partial (58%)
Length = 747
Score = 229 bits (585), Expect = 9e-61
Identities = 120/184 (65%), Positives = 143/184 (77%), Gaps = 7/184 (3%)
Frame = +2
Query: 2 IQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPL 61
IQ+L L+ L SP V KR+E L+EIQ +HD+++A F +E+ ALEAKYQ LYQPL
Sbjct: 200 IQSLAGAHSDVLETL--SPNVRKRVESLREIQGKHDEIEADFLKEKEALEAKYQKLYQPL 373
Query: 62 YTKRYEIVNGLAEVEGA---DIDEPEV----KGVPYFWLVALQNNDEIADEITERDEDAL 114
YTKRYEIVNG+ EVEGA DE E KGVP FWL A++NND +A+EI+ERDE AL
Sbjct: 374 YTKRYEIVNGVIEVEGAANETTDESEEDKGKKGVPSFWLNAMKNNDVLAEEISERDEGAL 553
Query: 115 KYLKDIKYTRTTEPQGFKLEFFFDSNPYFSNTILTKTYHMVDEDEFIMEKAIGTEIEWLP 174
K+LKDIK++R P+GFKLEFFFD+NPYFSNTILTKTYHM+DEDE I+EKAIGT IEW P
Sbjct: 554 KFLKDIKWSRIENPKGFKLEFFFDTNPYFSNTILTKTYHMIDEDEPILEKAIGTXIEWYP 733
Query: 175 GKSL 178
GK L
Sbjct: 734 GKCL 745
>TC215203 similar to UP|Q70Z19 (Q70Z19) Nucleosome assembly protein 1-like
protein 1, partial (31%)
Length = 729
Score = 123 bits (308), Expect = 1e-28
Identities = 60/121 (49%), Positives = 86/121 (70%)
Frame = +2
Query: 187 AKQTIETEKFDSFFNFFNSLEIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAV 246
AK +TEK +SFFNFFN ++P+D +D++A EEL+N MEHDYDIGSTIRDKIIP+AV
Sbjct: 11 AKPITKTEKCESFFNFFNPPQVPEDDDDIDDDAVEELENLMEHDYDIGSTIRDKIIPHAV 190
Query: 247 SWYTGEASDGESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDDNEDVNNPKK 306
SW+TGEA+ + D+D+ D +++E DD+++ E+ED+ D+D ED+ E K
Sbjct: 191 SWFTGEAAQSDFEDIDEADYEDEEGDDDDD-----EDEDE----DEDGEDEEEKKGKSKS 343
Query: 307 R 307
+
Sbjct: 344 K 346
>TC215450 similar to UP|P93488 (P93488) NAP1Ps, partial (30%)
Length = 672
Score = 119 bits (299), Expect = 1e-27
Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Frame = +3
Query: 207 EIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDG-ESGDLDDDD 265
+ P+D +DE+A ELQN+ME DYDIGSTIRDKIIP+AVSW+TGEA G E GDL+DD+
Sbjct: 42 KFPEDDEDIDEDAAXELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGDLEDDE 221
Query: 266 DDED-EEDDEEEVEVEKEEEDDNYGLDDDEEDDNEDVNNPKKR 307
DDED EEDD+EE E+E+ED DDD+EDD E+ KK+
Sbjct: 222 DDEDIEEDDDEE---EEEDED-----DDDDEDDEEESKTKKKK 326
>TC215452 similar to UP|P93488 (P93488) NAP1Ps, partial (29%)
Length = 609
Score = 109 bits (273), Expect = 1e-24
Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +3
Query: 221 EELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDG-ESGDLDDDDDDEDEEDDEEEVEV 279
EELQN+ME DYDIGSTIRDKIIP+AVSW+TGEA G E GDL+DD+DDED E+D++E
Sbjct: 12 EELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGDLEDDEDDEDIEEDDDE--- 182
Query: 280 EKEEEDDNYGLDDDEEDDNEDVNNPKKR 307
+EEDD+ DDD++DD+E+ + KK+
Sbjct: 183 --DEEDDD---DDDDDDDDEEESKTKKK 251
>TC228249 similar to UP|Q9M9V0 (Q9M9V0) F6A14.10 protein, partial (82%)
Length = 1066
Score = 109 bits (272), Expect = 2e-24
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Frame = +3
Query: 26 LEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPLYTKRYEIVNGLAEVEGADIDEPEV 85
+E L+E+Q E D + + ++ +E KY + +P+Y KR ++V
Sbjct: 159 IEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNDVV---------------- 290
Query: 86 KGVPYFWLVALQNNDEIADEITERDEDALKYLKDIKYTRTTEPQ-GFKLEFFFDSNPYFS 144
K +P FW A ++ + + + D+ KYL + + + G+ + F F+ NPYF
Sbjct: 291 KSIPDFWFTAFMSHPALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFE 470
Query: 145 NTILTKTYHMVDEDEFIMEKAIGTEIEWLPGKSLTEKKDPNTAKQTIETEKFD-SFFNFF 203
NT LTKT+ ++E K T I+W GK L D + K + + D SFF++F
Sbjct: 471 NTKLTKTFTFLEEG---TTKITATPIKWKEGKGLPNGLDHD--KNGNKRARIDISFFSWF 635
Query: 204 NSLEIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGE-SGDLD 262
+ E D VDE DE + I+D + PN ++++ E + + + D
Sbjct: 636 SDCEQKDD---VDEIHDE-----------VAELIKDDLWPNPLTYFNNELDEEDVDSEAD 773
Query: 263 DDDDDEDEEDDEEEVEVEKEEEDDNY 288
D+++DED+ +D+++ E + ED N+
Sbjct: 774 DEENDEDDSEDDDQEENDAGSEDGNH 851
>TC218919 homologue to UP|Q39892 (Q39892) Nucleosome assembly protein 1,
partial (33%)
Length = 729
Score = 106 bits (264), Expect = 2e-23
Identities = 52/107 (48%), Positives = 74/107 (68%)
Frame = +1
Query: 202 FFNSLEIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGESGDL 261
FF E+P+D D++ EELQN+ DYDIGS +RDKIIP+AVSW+TGE + G+ +
Sbjct: 7 FFKPPEVPEDDAXXDQDLAEELQNQXXXDYDIGSXLRDKIIPHAVSWFTGEXAQGD--EF 180
Query: 262 DDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDDNEDVNNPKKRV 308
+D +DDEDEE+DE+ E+ED+ Y D+DE+D+ ED KK++
Sbjct: 181 EDLEDDEDEEEDED------EDEDEEY--DEDEDDEEEDDTKTKKKL 297
>TC215448 similar to UP|P93488 (P93488) NAP1Ps, partial (28%)
Length = 485
Score = 101 bits (251), Expect = 5e-22
Identities = 55/86 (63%), Positives = 63/86 (72%)
Frame = +1
Query: 2 IQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPL 61
IQ+L Q L+ L SP V KR+EVL+EIQ +HD+L+AKFFEERAALEAKYQ LYQPL
Sbjct: 226 IQSLAGQHSDILESL--SPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPL 399
Query: 62 YTKRYEIVNGLAEVEGADIDEPEVKG 87
YTKRYEIVNG EVE + E G
Sbjct: 400 YTKRYEIVNGATEVEEGAVKETTPDG 477
>TC223182 similar to UP|Q84UX6 (Q84UX6) Nucleosome/chromatin assembly factor
group A, partial (29%)
Length = 442
Score = 89.4 bits (220), Expect = 2e-18
Identities = 48/98 (48%), Positives = 65/98 (65%), Gaps = 8/98 (8%)
Frame = +3
Query: 2 IQALTQQRYKALQYLFASPIVEKRLEVLKEIQKEHDDLKAKFFEERAALEAKYQLLYQPL 61
+Q L Q L+ L P V +R+E+L+++Q +HD+++AKF EER+ LEAKYQ LY+PL
Sbjct: 153 LQLLAGQHVDILETL--PPKVRQRVEILRDLQSQHDEVEAKFLEERSQLEAKYQKLYEPL 326
Query: 62 YTKRYEIVNGLAEVEGADID--------EPEVKGVPYF 91
Y+KRYEIVNG+ EVEG + E KGVP F
Sbjct: 327 YSKRYEIVNGVVEVEGVTNEAVPEEGNKPAEEKGVPDF 440
>AI495777
Length = 296
Score = 78.6 bits (192), Expect = 3e-15
Identities = 39/73 (53%), Positives = 49/73 (66%), Gaps = 7/73 (9%)
Frame = +2
Query: 169 EIEWLPGKSLTEK-------KDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMGVDEEADE 221
EIEW PGK LT+K K AK +TEK +SFFNFFN ++P+D +D++A E
Sbjct: 2 EIEWHPGKCLTQKILKKKPSKGSKNAKPITKTEKCESFFNFFNPPQVPEDDDDIDDDAVE 181
Query: 222 ELQNEMEHDYDIG 234
EL+N MEHDYDIG
Sbjct: 182 ELENLMEHDYDIG 220
>TC215451 weakly similar to UP|Q94K07 (Q94K07) Nucleosome assembly protein,
partial (20%)
Length = 777
Score = 73.2 bits (178), Expect = 1e-13
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +2
Query: 240 KIIPNAVSWYTGEASDG-ESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDDN 298
+ +P+AVSW+TGEA G E GDL+DD+DDED E+D++E +EEDD+ DDD++DD+
Sbjct: 20 RCVPHAVSWFTGEAIQGDEFGDLEDDEDDEDIEEDDDE-----DEEDDD---DDDDDDDD 175
Query: 299 EDVNNPKKRV 308
E+ + KK+V
Sbjct: 176 EEESKTKKKV 205
>TC207954 similar to UP|Q9M9V0 (Q9M9V0) F6A14.10 protein, partial (33%)
Length = 742
Score = 63.5 bits (153), Expect = 1e-10
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Frame = +3
Query: 143 FSNTILTKTYHMVDEDEFIMEKAIGTEIEWLPGKSLT-----EKKDPNTAKQTIETEKFD 197
F +T L KTY ++E K T I+W GK + EKK A +
Sbjct: 3 FEDTKLVKTYTFLEEGT---TKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDV------ 155
Query: 198 SFFNFFNSLEIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGE 257
SFF++F+ E D +D+ DE + I+D + PN ++++ E D E
Sbjct: 156 SFFSWFSDTEQKDD---IDDIHDE-----------VAELIKDDLWPNPLTYFNNEEPDEE 293
Query: 258 SGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDD 297
GD +D+ DDE +ED E +++DDN DD+ E+D
Sbjct: 294 EGD-EDEADDEGKED-------ESDDDDDNQEDDDEGEED 389
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 58.2 bits (139), Expect = 5e-09
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Frame = -3
Query: 211 DGMGVDEEADEELQNEMEHDYDIGSTIRD--KIIPNAVSW---YTGEASDGESGDLDDDD 265
DG G E +EEL +E Y S + K P + GE + E GD DDD
Sbjct: 589 DGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDD 410
Query: 266 DDEDEEDDEEEVEVEKEEEDDNYGLDDDE----EDDNEDVNNPKKR 307
D++D++DDEE+ E+E+ED G +D+E E+D E + PKKR
Sbjct: 409 DEDDDDDDEEDEAGEEEDED---GAEDEENEEDEEDEEALQPPKKR 281
Score = 32.0 bits (71), Expect = 0.36
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 35/82 (42%)
Frame = -3
Query: 254 SDGESGDLDDDDDDEDEE----DDEEEVEV------------------------------ 279
++GE G+ D+ DDD+D + + EEE+
Sbjct: 634 AEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEEN 455
Query: 280 -EKEEEDDNYGLDDDEEDDNED 300
E++E++D DDD+EDD++D
Sbjct: 454 GEEDEDEDGDDQDDDDEDDDDD 389
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 57.0 bits (136), Expect = 1e-08
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Frame = -1
Query: 211 DGMGVDEEADEELQNEMEHDYDIGSTIRD--KIIPNAVSW---YTGEASDGESGDLDDDD 265
DG G E +EEL +E Y S + K P + GE + E GD DDD
Sbjct: 556 DGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDD 377
Query: 266 DDEDEEDDEEEVEVEKEEEDD---NYGLDDDEEDDNEDVNNPKKR 307
+D+D++DD+EE E +EE++D + ++DEED+ E+ P K+
Sbjct: 376 EDDDDDDDDEEDEGGEEEDEDGAEDEENEEDEEDEEEEALQPPKK 242
Score = 32.0 bits (71), Expect = 0.36
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 35/82 (42%)
Frame = -1
Query: 254 SDGESGDLDDDDDDEDEE----DDEEEVEV------------------------------ 279
++GE G+ D+ DDD+D + + EEE+
Sbjct: 601 AEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGGGYGNNSNNKSNSKKAPEGGAGGAEEN 422
Query: 280 -EKEEEDDNYGLDDDEEDDNED 300
E++E++D DDDE+DD++D
Sbjct: 421 GEEDEDEDGDDQDDDEDDDDDD 356
>BE822052 similar to GP|4557063|gb|A expressed protein {Arabidopsis
thaliana}, partial (28%)
Length = 668
Score = 54.3 bits (129), Expect = 7e-08
Identities = 39/120 (32%), Positives = 54/120 (44%), Gaps = 8/120 (6%)
Frame = -1
Query: 196 FDSFFNFFNSLEIPKDGMGVDEEADEEL------QNEMEHDYDIGSTIRDKIIPNAVSWY 249
FD ++ + KD DE+ DEE QN+ E D D ++ P
Sbjct: 575 FDDLCKGKHTYRLNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPEDDPEA 396
Query: 250 TGEASDGESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDDNEDVNNP--KKR 307
G + D D+DDDD+++ DD+ E E EKE ED E+D E+V P KKR
Sbjct: 395 NGAGGSNDDDDSDEDDDDDNDGDDDGEDEDEKEGED---------EEDEEEVPQPPTKKR 243
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 53.1 bits (126), Expect = 2e-07
Identities = 36/127 (28%), Positives = 61/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 KSLTEKKDPNTAKQTIETEKFDSFFNFFNSLEIPKDGMGVDEEADEELQNEMEHDYDIGS 235
K L+E+ + N K +E + D + + + VD+ D+E + E + D +
Sbjct: 233 KELSEQVEENEVKVLVEED--DEEYESVDEV--------VDDAEDDEDEEEDDDDDE--- 373
Query: 236 TIRDKIIPNAVSWYTGEASDGESGDLDDDDDDEDEEDDEEEVEVEK--EEEDDNYGLDDD 293
G+ +D E D D DD+D+EDDEEE +V++ E +DD+ DDD
Sbjct: 374 ---------------GDDNDDEEDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDD 508
Query: 294 EEDDNED 300
+DD ++
Sbjct: 509 SDDDEDE 529
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +2
Query: 216 DEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGESGDLDDDDDDEDEEDDEE 275
DE+ DEE + E + D+G+ + + A + E ++++D +DE+ ++
Sbjct: 518 DEDEDEEDEEEQGEEEDLGTEYLIRPLETAEEEEASSDFEPEENGEEEEEDVDDEDCEKA 697
Query: 276 EVEVEKEEEDDNYGLDDDEEDDNEDVNNPKKR 307
E +++ D + D D++D ED P KR
Sbjct: 698 EAPPKRKRSDKD---DSDDDDGGEDDERPSKR 784
>TC207955 weakly similar to UP|Q94F78 (Q94F78) Nucleosome/chromatin assembly
factor A, partial (26%)
Length = 694
Score = 52.4 bits (124), Expect = 3e-07
Identities = 32/95 (33%), Positives = 50/95 (51%), Gaps = 6/95 (6%)
Frame = +1
Query: 198 SFFNFFNSLEIPKDGMGVDEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGE 257
SFF++F+ E D +D+ DE + I+D + PN ++++ E D E
Sbjct: 64 SFFSWFSDTEQKDD---IDDIHDE-----------VAELIKDDLWPNPLTYFNNEEPDEE 201
Query: 258 SGDLDDDDDDE------DEEDDEEEVEVEKEEEDD 286
GD D+ DD+ D++DD+EE + E EEEDD
Sbjct: 202 EGDEDEADDEGKEDESGDDDDDQEEDDDEGEEEDD 306
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 51.6 bits (122), Expect = 4e-07
Identities = 38/121 (31%), Positives = 57/121 (46%), Gaps = 9/121 (7%)
Frame = +1
Query: 196 FDSFFNFFNSLEIPKDGMGVDEEADEEL-------QNEMEHDYDIGSTIRDKIIPNAVSW 248
FD ++ + KD DE+ DEE Q++ E D D ++ P
Sbjct: 328 FDDLCKGKHTYLLNKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPE---- 495
Query: 249 YTGEASDGESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLDDDEEDDNEDVNNP--KK 306
++G G D DDD+D DD+++ + + ED+ G D+DEED+ EDV P KK
Sbjct: 496 -DDPEANGAGGSDSDGDDDDDGGDDDDDDNGDDDGEDEEEGEDEDEEDE-EDVPQPPAKK 669
Query: 307 R 307
R
Sbjct: 670 R 672
Score = 30.8 bits (68), Expect = 0.81
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 15/83 (18%)
Frame = +1
Query: 216 DEEADEELQNEMEHDYDIGSTIRDKIIPNAVSWYTGEASDGESGDLDDDDD--------- 266
DEE DE+ E E + D D N + D + G DDDDD
Sbjct: 439 DEEGDEDFSGEGEEEADP----EDDPEANGAGGSDSDGDDDDDGGDDDDDDNGDDDGEDE 606
Query: 267 ------DEDEEDDEEEVEVEKEE 283
DE++E+D + +K +
Sbjct: 607 EEGEDEDEEDEEDVPQPPAKKRK 675
Score = 29.6 bits (65), Expect = 1.8
Identities = 18/68 (26%), Positives = 32/68 (46%)
Frame = +1
Query: 232 DIGSTIRDKIIPNAVSWYTGEASDGESGDLDDDDDDEDEEDDEEEVEVEKEEEDDNYGLD 291
D+ ++ K+ P + + G+ L + D + +ED +E EE+DD+
Sbjct: 274 DVNHSVSPKLTPMDGRFPFDDLCKGKHTYLLNKDASDSDEDGDE------EEDDDDADDQ 435
Query: 292 DDEEDDNE 299
DDEE D +
Sbjct: 436 DDEEGDED 459
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.134 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,264,022
Number of Sequences: 63676
Number of extensions: 124721
Number of successful extensions: 6096
Number of sequences better than 10.0: 429
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3451
length of query: 308
length of database: 12,639,632
effective HSP length: 97
effective length of query: 211
effective length of database: 6,463,060
effective search space: 1363705660
effective search space used: 1363705660
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC138526.4