BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138451.8 - phase: 0
(117 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding ... 43 2e-05
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 43 2e-05
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 40 2e-04
TC229066 weakly similar to GB|AAO24542.1|27808524|BT003110 At1g5... 38 6e-04
TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding ... 38 8e-04
AW598720 weakly similar to GP|21322711|e pherophorin-dz1 protein... 37 0.001
TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 0.001
TC207679 similar to UP|Q7XJI7 (Q7XJI7) Glycine-rich protein TomR... 37 0.001
TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein... 37 0.001
AW311078 similar to GP|13872979|dbj P0702B09.13 {Oryza sativa (j... 37 0.001
TC232422 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment... 37 0.001
TC216231 similar to UP|Q41188 (Q41188) Glycine-rich protein 2 (G... 37 0.001
TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (... 37 0.002
TC214257 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 0.002
TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, ... 36 0.002
TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%) 36 0.002
TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, co... 36 0.002
TC224896 similar to UP|Q94EH8 (Q94EH8) At1g66260/T6J19_1, partia... 36 0.002
BQ079492 36 0.003
CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 34 0.009
>TC204079 similar to UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein,
complete
Length = 748
Score = 43.1 bits (100), Expect = 2e-05
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G +GGG G GG+GGGGGY G G GGGG
Sbjct: 349 GGGGGYGGGRGGGYGGGGRGGGGGYNRSGGGGGYGGGG 462
Score = 35.4 bits (80), Expect = 0.004
Identities = 21/44 (47%), Positives = 23/44 (51%), Gaps = 5/44 (11%)
Frame = +1
Query: 78 KGTGWQTTGRKGGGS-----GKGGKGGGGGYRIPIPGVGKGGGG 116
+G G+ GR GGG G GG GGGGGY G GGGG
Sbjct: 376 RGGGYGGGGRGGGGGYNRSGGGGGYGGGGGY-------GGGGGG 486
Score = 34.7 bits (78), Expect = 0.007
Identities = 21/44 (47%), Positives = 23/44 (51%), Gaps = 2/44 (4%)
Frame = +1
Query: 75 SITKGTGWQTTGRKGGGSGKGGKGG--GGGYRIPIPGVGKGGGG 116
+IT G GGG G GG GG GGGY G G+GGGG
Sbjct: 298 NITVNEAQSRGGGGGGGGGGGGYGGGRGGGY----GGGGRGGGG 417
Score = 32.0 bits (71), Expect = 0.043
Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 81 GWQTTGRKGGGSGKGG----KGGGGGYRIPIPGVGKGGGG 116
G + G GGG G GG GGGGGY G G GGGG
Sbjct: 370 GGRGGGYGGGGRGGGGGYNRSGGGGGYG---GGGGYGGGG 480
Score = 29.6 bits (65), Expect = 0.21
Identities = 19/35 (54%), Positives = 20/35 (56%), Gaps = 4/35 (11%)
Frame = +1
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGK----GGGG 116
G GGG G GG GGGGGY G G+ GGGG
Sbjct: 442 GGYGGGGGYGG-GGGGGY-----GGGRDRGYGGGG 528
Score = 28.9 bits (63), Expect = 0.36
Identities = 18/37 (48%), Positives = 20/37 (53%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGG 115
G G+ +G GGG G GG GGGG G G GGG
Sbjct: 412 GGGYNRSGG-GGGYGGGGGYGGGG------GGGYGGG 501
Score = 24.6 bits (52), Expect = 6.9
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +1
Query: 81 GWQTTGRKGGGS---GKGGKGGGGGYR 104
G + G GGG +GG GG GG+R
Sbjct: 496 GGRDRGYGGGGDRGYSRGGDGGDGGWR 576
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 43.1 bits (100), Expect = 2e-05
Identities = 33/92 (35%), Positives = 39/92 (41%), Gaps = 2/92 (2%)
Frame = -2
Query: 28 EGDRNTNECGGAILKGNEGKSNDGCGDGIEI--HCRKGYVDGTIWDKDISITKGTGWQTT 85
EG ECGG G + CG G E+ +C T G G T
Sbjct: 269 EGGGGGGECGG-------GGGGECCGGGGEL**YC----------------TGGGGENTG 159
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G GGG G GG+GGGG VG+GGGG+
Sbjct: 158 GGGGGGDGGGGEGGGGDL---TQYVGEGGGGE 72
Score = 35.4 bits (80), Expect = 0.004
Identities = 39/109 (35%), Positives = 47/109 (42%), Gaps = 10/109 (9%)
Frame = -2
Query: 19 WLGKGTLLQEGDRNTNEC---GGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDIS 75
W G G GD EC GG G G G G G I +G DG + +
Sbjct: 497 W*GAGC----GDGGGGECSSHGGGDGGGGGGSIQGGGGGGGSI---QGGGDGGGGGGE*T 339
Query: 76 ITKGTGWQTTGRKGGG-----SGKGGKGGGGGYRIPIPGVGK--GGGGK 117
G G + TG GGG +G GG+GGGGG G G+ GGGG+
Sbjct: 338 ---GGGGE*TGGGGGGDK*G*TGGGGEGGGGGGECGGGGGGECCGGGGE 201
Score = 30.0 bits (66), Expect = 0.16
Identities = 26/73 (35%), Positives = 30/73 (40%)
Frame = -2
Query: 29 GDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRK 88
G NT GG G+ G G GD + G +G G G + TG
Sbjct: 176 GGENTGGGGGG---GDGGGGEGGGGDLTQYVGEGGGGEGG----------GGGGE*TG-- 42
Query: 89 GGGSGKGGKGGGG 101
GGG G GG GGGG
Sbjct: 41 GGGEGGGGDGGGG 3
Score = 29.6 bits (65), Expect = 0.21
Identities = 21/51 (41%), Positives = 22/51 (42%), Gaps = 13/51 (25%)
Frame = -2
Query: 79 GTGWQTTGRKGGGSGKG-----GKGGGGGYRI--------PIPGVGKGGGG 116
G GW G GG G+ G GGGGG I I G G GGGG
Sbjct: 506 GGGW*GAGCGDGGGGECSSHGGGDGGGGGGSIQGGGGGGGSIQGGGDGGGG 354
Score = 28.5 bits (62), Expect = 0.47
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
Frame = -2
Query: 89 GGGSGKGGK------GGGGGYRIPIPGVGKGGGG 116
GGG G GG G GGG G G GGGG
Sbjct: 524 GGGDGDGGGW*GAGCGDGGGGECSSHGGGDGGGG 423
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 39.7 bits (91), Expect = 2e-04
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G +GGG G GG GGGGG G GKGGGG
Sbjct: 74 GGGGGGGGGRGGGGGGGGGGGGGG------GGGKGGGG 169
Score = 38.5 bits (88), Expect = 5e-04
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G GR GGG G GG GGGGG G G GGGG
Sbjct: 77 GGGGGGGGRGGGGGGGGGGGGGGGGGKGGGGGGGGGGG 190
Score = 38.1 bits (87), Expect = 6e-04
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G GGG G GG GGGGG R G G GGGG
Sbjct: 267 GGGGGGGGGGGXGGGGGGRGEGGGGGGGGGG 359
Score = 38.1 bits (87), Expect = 6e-04
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG GGGGG R G G GGGG
Sbjct: 26 GGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGG 139
Score = 37.7 bits (86), Expect = 8e-04
Identities = 21/38 (55%), Positives = 21/38 (55%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG GGGGG R G G GGGG
Sbjct: 81 GGGEGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGG 194
Score = 37.7 bits (86), Expect = 8e-04
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +1
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G +GGG G GG GGGGG G G GGGG
Sbjct: 247 GERGGGGGGGGGGGGGG------GXGGGGGG 321
Score = 37.4 bits (85), Expect = 0.001
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG+GGGGG G G GGGG
Sbjct: 274 GGGGGGGGGXGGGGGGGGRGGGGG------GGGGGGGG 369
Score = 37.0 bits (84), Expect = 0.001
Identities = 29/80 (36%), Positives = 32/80 (39%)
Frame = +2
Query: 37 GGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRKGGGSGKGG 96
GG KG G G G G G G + + +G G GGG G GG
Sbjct: 140 GGGGGKGGGGGGGGGGGGG-------GGGGGGFFRGERXXGRGGRGGGGGGGGGGGGGGG 298
Query: 97 KGGGGGYRIPIPGVGKGGGG 116
GGGGG G G GGGG
Sbjct: 299 GGGGGGGEGGGGGGGGGGGG 358
Score = 37.0 bits (84), Expect = 0.001
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG GGGGG G G+GGGG
Sbjct: 72 GGGGGGEGGGGGGGGGGGGGGGGG-----GGGGRGGGG 170
Score = 37.0 bits (84), Expect = 0.001
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG GGGGG G G+GGGG
Sbjct: 6 GRGLPGGGGGGGGGGGGGGGGGGG-----GGGGEGGGG 104
Score = 36.6 bits (83), Expect = 0.002
Identities = 22/45 (48%), Positives = 23/45 (50%), Gaps = 7/45 (15%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGG-------GYRIPIPGVGKGGGG 116
G G GR GGG G GG GGGG G R G G+GGGG
Sbjct: 132 GGGGGGGGRGGGGGGGGGGGGGGGGGGGFLGGREXXGGGGEGGGG 266
Score = 36.6 bits (83), Expect = 0.002
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G+GG GGGGG G G GGGG
Sbjct: 109 GGGGGGGGGGGGGGGEGGGGGGGG------GGGGGGGG 204
Score = 36.6 bits (83), Expect = 0.002
Identities = 20/39 (51%), Positives = 21/39 (53%)
Frame = +2
Query: 78 KGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+G G G GGG G GG GGGGG G G GGGG
Sbjct: 20 RGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGG 136
Score = 36.2 bits (82), Expect = 0.002
Identities = 19/36 (52%), Positives = 20/36 (54%)
Frame = +2
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G + R GGG G GG GGGGG G G GGGG
Sbjct: 2 GGERFARGGGGGGGGGGGGGGG------GGGGGGGG 91
Score = 35.8 bits (81), Expect = 0.003
Identities = 28/80 (35%), Positives = 32/80 (40%)
Frame = +3
Query: 37 GGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRKGGGSGKGG 96
GG +G G G G G G G + ++ G G G GGG G G
Sbjct: 141 GGGGGRGGGGGGGGGGGGG------GGGGGGFLGGREXXGGGGEGGGGGGGGGGGGGGGX 302
Query: 97 KGGGGGYRIPIPGVGKGGGG 116
GGGGG G G GGGG
Sbjct: 303 GGGGGGRGEGGGGGGGGGGG 362
Score = 35.0 bits (79), Expect = 0.005
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G G G GGG G GG GGGGG G G+ GGG+
Sbjct: 303 GGGGGGRGEGGGGGGGGGGGGGGGGE----GGGRRGGGE 407
Score = 34.7 bits (78), Expect = 0.007
Identities = 19/39 (48%), Positives = 20/39 (50%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G G G GGG G GG GGGGG G GGGG+
Sbjct: 1 GGGEVCPGGGGGGGGGGGGGGGGG--------GGGGGGR 93
Score = 33.9 bits (76), Expect = 0.011
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGG 115
G G G KGGG G GG GGGGG G GGG
Sbjct: 128 GGGGGGGGGKGGGGGGGGGGGGGG--------GGGGG 214
Score = 33.5 bits (75), Expect = 0.015
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGG 114
G G G +GGG G GG GGGGG G G+GG
Sbjct: 293 GGGGGGGGGEGGGGGGGGGGGGGG------GGGRGG 382
Score = 33.1 bits (74), Expect = 0.019
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +1
Query: 76 ITKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+ G G G GGG G GG GGGG G G GGGG
Sbjct: 13 VCPGGGGGGGGGGGGGGGGGGGGGGGRGGEGGGGGGGGGGG 135
Score = 33.1 bits (74), Expect = 0.019
Identities = 19/39 (48%), Positives = 20/39 (50%)
Frame = +2
Query: 78 KGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+G G G GGG G G GGGGG G G GGGG
Sbjct: 101 RGGGGGGGGGGGGGGGGGKGGGGGG------GGGGGGGG 199
Score = 31.2 bits (69), Expect = 0.073
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRI------PIPGVGKGGGG 116
G G G GGG G GG GGGGG + G +GGGG
Sbjct: 136 GGGGGGEGGGGGGGGGGGGGGGGGGGVF*GGERXREGGERGGGG 267
>TC229066 weakly similar to GB|AAO24542.1|27808524|BT003110 At1g56320
{Arabidopsis thaliana;} , partial (42%)
Length = 858
Score = 38.1 bits (87), Expect = 6e-04
Identities = 20/46 (43%), Positives = 25/46 (53%)
Frame = -1
Query: 71 DKDISITKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
D+ + T G G+ G GG+G G GGGGG+ G G GGGG
Sbjct: 792 DESEAQTGGGGYGGVGGGFGGAGAGVVGGGGGFGAGGGGFGAGGGG 655
Score = 26.9 bits (58), Expect = 1.4
Identities = 16/35 (45%), Positives = 17/35 (47%)
Frame = -1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKG 113
G G G GGG G G GGGG+ GVG G
Sbjct: 741 GFGGAGAGVVGGGGGFGA--GGGGFGAGGGGVGSG 643
>TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding protein,
partial (95%)
Length = 1019
Score = 37.7 bits (86), Expect = 8e-04
Identities = 19/34 (55%), Positives = 20/34 (57%)
Frame = +2
Query: 83 QTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
QT +GGG G GG G GGGY G G GGGG
Sbjct: 290 QTRASRGGGGG-GGFGSGGGYNRGSGGYGGGGGG 388
Score = 30.4 bits (67), Expect = 0.12
Identities = 17/38 (44%), Positives = 20/38 (51%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G GR+ GG + G GGGGGY G +G GG
Sbjct: 380 GGGGGYGGRREGGYNRNGGGGGGGYG---GGRDRGYGG 484
Score = 28.9 bits (63), Expect = 0.36
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPG----VGKGGGG 116
G G G GG GGGGGY G G GGGG
Sbjct: 344 GYNRGSGGYGGGGGGGGYGGRREGGYNRNGGGGGG 448
Score = 27.3 bits (59), Expect = 1.1
Identities = 15/32 (46%), Positives = 17/32 (52%)
Frame = +2
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G GGG G GG+ GG R G G GGG+
Sbjct: 371 GGGGGGGGYGGRREGGYNRNGGGGGGGYGGGR 466
Score = 25.0 bits (53), Expect = 5.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGG 102
G G+ + G GSG G GGGGG
Sbjct: 320 GGGFGSGGGYNRGSGGYGGGGGGG 391
>AW598720 weakly similar to GP|21322711|e pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (12%)
Length = 411
Score = 37.4 bits (85), Expect = 0.001
Identities = 29/77 (37%), Positives = 31/77 (39%), Gaps = 3/77 (3%)
Frame = -1
Query: 43 GNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRKGGGSGKGGKGGG-- 100
G G DG GI I + G DG G GW G GGG G G KG G
Sbjct: 399 GGGGGGGDGVKPGITIGGKGGNKDGG--------GLGGGWNGLGISGGGLGGGWKGLGKR 244
Query: 101 -GGYRIPIPGVGKGGGG 116
GG G+G GGG
Sbjct: 243 VGGLGGGWNGLGMSGGG 193
Score = 29.6 bits (65), Expect = 0.21
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -1
Query: 84 TTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
T G KGG GG GGG + I G G GGG K
Sbjct: 357 TIGGKGGNKDGGGLGGGWN-GLGISGGGLGGGWK 259
Score = 28.1 bits (61), Expect = 0.62
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Frame = -1
Query: 79 GTGWQTTGRKGGGSG-------KGGKGGGGGYRIPIPGVGKGGGGK 117
G GW G GGG G GG GG G+ I +GGG K
Sbjct: 231 GGGWNGLGMSGGGLGGWNGFGMSGGLGGCSGFGI------RGGG*K 112
>TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (14%)
Length = 642
Score = 37.4 bits (85), Expect = 0.001
Identities = 32/95 (33%), Positives = 38/95 (39%)
Frame = -3
Query: 21 GKGTLLQEGDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGT 80
G G G+ + ++ GG+ G G G G G GY G
Sbjct: 526 GSGGSAGGGEGSGSQGGGS---GGGGSQGGGSGSG-----GGGYGGGG----------SG 401
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGG 115
G + G GGG G GG GGGGGY G KGGG
Sbjct: 400 GSEGGGSSGGGGGGGGGGGGGGYG---GGGDKGGG 305
Score = 36.6 bits (83), Expect = 0.002
Identities = 30/96 (31%), Positives = 39/96 (40%)
Frame = -3
Query: 21 GKGTLLQEGDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGT 80
G G+ G + GG +G G + G G G+ + S ++G
Sbjct: 631 GGGSAGGGGSKGGGGYGGGGSQGGGGSAGGGGS*GGS--------GGSAGGGEGSGSQGG 476
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G +GGGSG GG G GGG G G GGG
Sbjct: 475 GSGGGGSQGGGSGSGGGGYGGGGSGGSEGGGSSGGG 368
Score = 31.2 bits (69), Expect = 0.073
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -3
Query: 85 TGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+G GGG G GG GG G G G GGGG
Sbjct: 442 SGSGGGGYGGGGSGGSEGGGSSGGGGGGGGGG 347
Score = 30.8 bits (68), Expect = 0.096
Identities = 29/79 (36%), Positives = 31/79 (38%)
Frame = -3
Query: 29 GDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRK 88
G +E GG+ G G G G G GY G I KG G K
Sbjct: 412 GGSGGSEGGGS--SGGGGGGGGGGGGG-------GYGGGGDKGGGIGGDKGDYHHGKGGK 260
Query: 89 GGGSGKGGKGGGGGYRIPI 107
G G G KGGGGGY I I
Sbjct: 259 GDKDG-GDKGGGGGY*ISI 206
Score = 28.5 bits (62), Expect = 0.47
Identities = 16/31 (51%), Positives = 18/31 (57%), Gaps = 2/31 (6%)
Frame = -3
Query: 88 KGGGSGKGGKG--GGGGYRIPIPGVGKGGGG 116
+GGG GG G GGGGY G +GGGG
Sbjct: 637 EGGGGSAGGGGSKGGGGYG---GGGSQGGGG 554
>TC207679 similar to UP|Q7XJI7 (Q7XJI7) Glycine-rich protein TomR2, partial
(22%)
Length = 425
Score = 37.0 bits (84), Expect = 0.001
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G+ + G GGG G G GGGGG G G GGGG
Sbjct: 27 GYGSGGGSGGGYGGGAAGGGGGGSGGGGGAGSGGGG 134
Score = 30.0 bits (66), Expect = 0.16
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGG--KGGGGGYRIPIPGVGKGGG 115
G G G GGGSG GG GGGG G G GGG
Sbjct: 57 GYGGGAAGGGGGGSGGGGGAGSGGGGAHGGGYGGGAGGG 173
Score = 30.0 bits (66), Expect = 0.16
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGG 115
G G+ GGG G GG GG G G G GGG
Sbjct: 51 GGGYGGGAAGGGGGGSGGGGGAGSGGGGAHGGGYGGG 161
Score = 27.3 bits (59), Expect = 1.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 90 GGSGKGGKGGGGGYRIPIPGVGKGGGG 116
GG+ +GG G GGG G GGGG
Sbjct: 9 GGAHEGGYGSGGGSGGGYGGGAAGGGG 89
Score = 27.3 bits (59), Expect = 1.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGY 103
G G G GGG+G G GG GGY
Sbjct: 123 GGGGAHGGGYGGGAGGGEGGGHGGY 197
Score = 26.9 bits (58), Expect = 1.4
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 88 KGGGSGKGGKGGG-GGYRIPIPGVGKGGGG 116
+GG GG GGG GG G G GGGG
Sbjct: 21 EGGYGSGGGSGGGYGGGAAGGGGGGSGGGG 110
Score = 25.0 bits (53), Expect = 5.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +3
Query: 86 GRKGGGSGKGGKGG--GGGYRIPIPGVGKGGGG 116
G G G G GG GGGY G G GG G
Sbjct: 3 GAGGAHEGGYGSGGGSGGGYGGGAAGGGGGGSG 101
>TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein-1, partial
(77%)
Length = 883
Score = 37.0 bits (84), Expect = 0.001
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +3
Query: 78 KGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+G G G GG G GG GGGGGY G G+GGGG
Sbjct: 324 RGGGGGGYGGGGGYGGGGGYGGGGGY----GGGGRGGGG 428
Score = 35.8 bits (81), Expect = 0.003
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = +3
Query: 87 RKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
R GGG G G GGGGG R G G GGGG
Sbjct: 498 RYGGGGGGGRYGGGGGGRYVGGGGGGGGGG 587
Score = 33.5 bits (75), Expect = 0.015
Identities = 19/36 (52%), Positives = 21/36 (57%), Gaps = 4/36 (11%)
Frame = +3
Query: 86 GRKGGGSGK----GGKGGGGGYRIPIPGVGKGGGGK 117
G +GGG G GG GGGGGY G G GGGG+
Sbjct: 318 GGRGGGGGGYGGGGGYGGGGGYG---GGGGYGGGGR 416
Score = 33.5 bits (75), Expect = 0.015
Identities = 16/31 (51%), Positives = 19/31 (60%)
Frame = +3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G + GG G GG+ GGGG + G G GGGG
Sbjct: 492 GDRYGGGGGGGRYGGGGGGRYVGGGGGGGGG 584
Score = 30.4 bits (67), Expect = 0.12
Identities = 24/60 (40%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Frame = +3
Query: 66 DGTIWDKDISITKGTGWQTTGRKGGGS-----GKG----GKGGGGGYRIPIPGVGKGGGG 116
DG D++ G Q T R G G G+G G GGGGGY G G GGGG
Sbjct: 225 DGRAKAVDVTGPDGASVQGTRRGGDGGRSYGGGRGGGGGGYGGGGGYG---GGGGYGGGG 395
Score = 29.3 bits (64), Expect = 0.28
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 89 GGGSGKGGKGGGGG 102
GGG G GG+GGGGG
Sbjct: 390 GGGYGGGGRGGGGG 431
Score = 28.5 bits (62), Expect = 0.47
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +3
Query: 89 GGGSGKGGKGGGGGYRIPIPG----VGKGGGG 116
GGG G GGGGG R G VG GGGG
Sbjct: 480 GGGGGDRYGGGGGGGRYGGGGGGRYVGGGGGG 575
>AW311078 similar to GP|13872979|dbj P0702B09.13 {Oryza sativa (japonica
cultivar-group)}, partial (15%)
Length = 236
Score = 37.0 bits (84), Expect = 0.001
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G KGGG+ KG KGG G +P P +GK GGG+
Sbjct: 135 GGKGGGATKGKKGGAPG--VPPPKMGKRGGGE 46
Score = 32.0 bits (71), Expect = 0.043
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -1
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G KGGG +G +GG G P GKGGGGK
Sbjct: 134 GEKGGGPQRGKRGGPPGS--PPQKWGKGGGGK 45
Score = 30.4 bits (67), Expect = 0.12
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 9/39 (23%)
Frame = -1
Query: 86 GRKGGGSG---------KGGKGGGGGYRIPIPGVGKGGG 115
G KGGG G KGGKGG GG P KGGG
Sbjct: 233 G*KGGGGGGPHPPKNWKKGGKGGRGGPFPQTPQGEKGGG 117
Score = 29.6 bits (65), Expect = 0.21
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -1
Query: 78 KGTGWQTTGRKGGGSG----KGGKGGGGGYRIPIPGVGKGGG 115
KG G Q G++GG G K GKGGGG P G+GGG
Sbjct: 128 KGGGPQR-GKRGGPPGSPPQKWGKGGGGKNPKNPPKKGEGGG 6
Score = 28.9 bits (63), Expect = 0.36
Identities = 18/41 (43%), Positives = 20/41 (47%), Gaps = 4/41 (9%)
Frame = -3
Query: 81 GWQTTGRKGGGSG----KGGKGGGGGYRIPIPGVGKGGGGK 117
G T G+KGG G K GK GGG P GGGG+
Sbjct: 123 GGATKGKKGGAPGVPPPKMGKRGGGEKPKKPPKKRGGGGGR 1
>TC232422 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment), partial
(11%)
Length = 637
Score = 37.0 bits (84), Expect = 0.001
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G GR GGG G+ G+GGGG R G+GGGG
Sbjct: 122 GGGEGRIGRGGGGEGRTGRGGGGEGR-----TGRGGGG 24
Score = 35.4 bits (80), Expect = 0.004
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGG 102
G G TGR GGG G+ G+GGGGG
Sbjct: 92 GGGEGRTGRGGGGEGRTGRGGGGG 21
Score = 32.7 bits (73), Expect = 0.025
Identities = 18/42 (42%), Positives = 25/42 (58%), Gaps = 2/42 (4%)
Frame = -3
Query: 78 KGTGWQTTGRKGGGSGKG--GKGGGGGYRIPIPGVGKGGGGK 117
+G G + +GGG G+G G+GGGG R G+GGGG+
Sbjct: 161 QGGGEEDERDRGGGGGEGRIGRGGGGEGR-----TGRGGGGE 51
Score = 27.3 bits (59), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (58%)
Frame = -3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G+ GG + +GGGGG +G+GGGG+
Sbjct: 164 GQGGGEEDERDRGGGGGE----GRIGRGGGGE 81
>TC216231 similar to UP|Q41188 (Q41188) Glycine-rich protein 2 (GRP2)
(AT4g38680/F20M13_240), partial (42%)
Length = 891
Score = 37.0 bits (84), Expect = 0.001
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = +3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G GGG G GG GGGGGY G G GGGG
Sbjct: 147 GGGGGGYGGGGYGGGGGY-----GGGGGGGG 224
Score = 36.6 bits (83), Expect = 0.002
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 77 TKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
T+G G G G G G+GG GGGG R G G GGGG
Sbjct: 51 TRGGGGXXRGSYGXGGGRGGYGGGG--RGGRGGYGGGGGG 164
Score = 33.5 bits (75), Expect = 0.015
Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 86 GRKG-GGSGKGGKGGGGGYRIPIPGVGKGGGG 116
GR G GG G+GG+GG GG G G GGGG
Sbjct: 99 GRGGYGGGGRGGRGGYGGGGGGYGGGGYGGGG 194
Score = 32.0 bits (71), Expect = 0.043
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGG---YRIPIPG-------VGKGGGGK 117
G G G GGG G GG GGGGG Y+ G G GGGG+
Sbjct: 153 GGGGYGGGGYGGGGGYGGGGGGGGGGCYKCGETGHIARDCSQGGGGGGR 299
Score = 28.9 bits (63), Expect = 0.36
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 17/55 (30%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGG-----------------KGGGGGYRIPIPGVGKGGGG 116
G G+ G GGG G GG +GGGGG R G G GGGG
Sbjct: 171 GGGYGGGGGYGGGGGGGGGGCYKCGETGHIARDCSQGGGGGGRY---GGGGGGGG 326
Score = 28.1 bits (61), Expect = 0.62
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G +GGG G G GG R G G+GG G
Sbjct: 48 GTRGGGGXXRGSYGXGGGRGGYGGGGRGGRG 140
>TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (clone
na-481-5), partial (20%)
Length = 752
Score = 36.6 bits (83), Expect = 0.002
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +2
Query: 50 DGCGDGIEIH-CRKGYVDGTIWDKDISITKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIP 108
D G +E+H G T+ + +G+G + G + GG G+ G GGGG R
Sbjct: 185 DSMGKALELHETELGGYTLTVDEAKPRDNQGSGGRGAGGRSGGGGRFGARGGGGGRFGAR 364
Query: 109 G-----VGKGGGGK 117
G G GGGG+
Sbjct: 365 GGGGRFGGSGGGGR 406
Score = 35.8 bits (81), Expect = 0.003
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +2
Query: 17 ANWLGKGTLLQEGDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISI 76
A+ +GK L E E GG L +E K D G G + G
Sbjct: 182 ADSMGKALELHE-----TELGGYTLTVDEAKPRDNQGSGGRGAGGRSGGGGRFG------ 328
Query: 77 TKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPG--VGKGGGGK 117
+G G G +GGG GG GGGG + G G+GGGG+
Sbjct: 329 ARGGGGGRFGARGGGGRFGGSGGGGRFGGSGGGRFGGRGGGGR 457
Score = 27.7 bits (60), Expect = 0.81
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 86 GRKGGGSGK--GGKGGGGGYRIPIPGVGKGGGGK 117
GR GG G GG+GGGG R P + G GK
Sbjct: 401 GRFGGSGGGRFGGRGGGGRGRGNRPNLAAEGTGK 502
>TC214257 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (7%)
Length = 607
Score = 36.6 bits (83), Expect = 0.002
Identities = 19/39 (48%), Positives = 22/39 (55%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G G+ G GG G GG GGGGG+ G G GGGG+
Sbjct: 50 GGGYNRNGGGGGYGGGGGYGGGGGHG---GGGGYGGGGR 157
Score = 35.8 bits (81), Expect = 0.003
Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 87 RKGGGSGKGGK--GGGGGYRIPIPGVGKGGGG 116
R GGG G GG+ GGGGGY G G GGGG
Sbjct: 5 RGGGGYGGGGRREGGGGGYNRNGGGGGYGGGG 100
Score = 31.6 bits (70), Expect = 0.056
Identities = 19/39 (48%), Positives = 22/39 (55%), Gaps = 1/39 (2%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGK-GGGGGYRIPIPGVGKGGGG 116
G G+ GR+ GG G + GGGGGY G G GGGG
Sbjct: 11 GGGYGGGGRREGGGGGYNRNGGGGGYG---GGGGYGGGG 118
>TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, complete
Length = 1145
Score = 36.2 bits (82), Expect = 0.002
Identities = 19/38 (50%), Positives = 19/38 (50%)
Frame = -3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G G G GG GGGGGYR G G G GG
Sbjct: 372 GGGGYNRGGGGYGGRSGGGGGGGGYRSRDGGYGGGYGG 259
Score = 33.1 bits (74), Expect = 0.019
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -3
Query: 83 QTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGG 115
Q+ G GGG G G GGGGY G G GGG
Sbjct: 399 QSRGGGGGGGGGGYNRGGGGYGGRSGGGGGGGG 301
Score = 29.3 bits (64), Expect = 0.28
Identities = 17/38 (44%), Positives = 18/38 (46%), Gaps = 2/38 (5%)
Frame = -3
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVG--KGGGG 116
G T + G GG GGGGGY G G GGGG
Sbjct: 426 GRNITVNEAQSRGGGGGGGGGGYNRGGGGYGGRSGGGG 313
Score = 28.9 bits (63), Expect = 0.36
Identities = 26/75 (34%), Positives = 28/75 (36%)
Frame = -3
Query: 29 GDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRK 88
G N G + NE +S G G G GY G S G G R
Sbjct: 453 GAMNGQNLDGRNITVNEAQSRGGGGGG----GGGGYNRGGGGYGGRSGGGGGGGGYRSRD 286
Query: 89 GGGSGKGGKGGGGGY 103
GG G G GGGGGY
Sbjct: 285 GGYGGGYGGGGGGGY 241
Score = 25.8 bits (55), Expect = 3.1
Identities = 30/95 (31%), Positives = 36/95 (37%)
Frame = -3
Query: 10 NIGVHEYANWLGKGTLLQEGDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTI 69
NI V+E + G G G N GG G G+S G G G GY G
Sbjct: 420 NITVNEAQSRGGGGG---GGGGGYNRGGG----GYGGRSGGGGGGGGYRSRDGGYGGG-- 268
Query: 70 WDKDISITKGTGWQTTGRKGGGSGKGGKGGGGGYR 104
G G G + G +GG GG GG+R
Sbjct: 267 ------YGGGGGGGYGGGRDRGYSRGGDGGDGGWR 181
>TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%)
Length = 1030
Score = 36.2 bits (82), Expect = 0.002
Identities = 22/45 (48%), Positives = 27/45 (59%), Gaps = 4/45 (8%)
Frame = -1
Query: 76 ITKGTGWQTTGRKGGGSGKGGKGGGGGYRI--PIPG--VGKGGGG 116
+T G G TG GGG KGG GGGGG+ + + G +G GGGG
Sbjct: 319 VTGGGGGGETGGGGGGGDKGG-GGGGGWLLY*LLEG*YIGAGGGG 188
>TC204084 UP|Q9SWA8 (Q9SWA8) Glycine-rich RNA-binding protein, complete
Length = 1937
Score = 36.2 bits (82), Expect = 0.002
Identities = 19/38 (50%), Positives = 19/38 (50%)
Frame = +2
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G G G GG GGGGGYR G G G GG
Sbjct: 1505 GGGGYNRGGGGYGGRSGGGGGGGGYRSRDGGYGGGYGG 1618
Score = 32.0 bits (71), Expect = 0.043
Identities = 18/37 (48%), Positives = 19/37 (50%), Gaps = 4/37 (10%)
Frame = +2
Query: 83 QTTGRKGGGSGKGGKG----GGGGYRIPIPGVGKGGG 115
+ R GGG G GG G GGGGY G G GGG
Sbjct: 1466 EAQSRGGGGGGGGGGGGYNRGGGGYGGRSGGGGGGGG 1576
Score = 27.7 bits (60), Expect = 0.81
Identities = 27/88 (30%), Positives = 31/88 (34%)
Frame = +2
Query: 29 GDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKGYVDGTIWDKDISITKGTGWQTTGRK 88
G N G + NE +S G G G G G +G G
Sbjct: 1418 GAMNGQNLDGRNITVNEAQSRGGGGGG-------GGGGG-------GYNRGGGGYGGRSG 1555
Query: 89 GGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
GGG G G + GGY G G GGGG
Sbjct: 1556 GGGGGGGYRSRDGGY-----GGGYGGGG 1624
Score = 26.9 bits (58), Expect = 1.4
Identities = 30/105 (28%), Positives = 37/105 (34%), Gaps = 4/105 (3%)
Frame = +2
Query: 4 QKKSKINIGVHEYANWLGKGTLLQEGDRNTNECGGAILKGNEGKSNDGCGDGIEIHCRKG 63
++ K IG N G+ + E GG G G N G G G G
Sbjct: 1394 EQSMKDAIGAMNGQNLDGRNITVNEAQSRGGGGGGG---GGGGGYNRG-GGGYGGRSGGG 1561
Query: 64 YVDGTIWDKDISITKGTGWQTTGRKGGGS----GKGGKGGGGGYR 104
G +D G G G GGG +GG GG GG+R
Sbjct: 1562 GGGGGYRSRDGGYGGGYGGGGGGGYGGGRDRGYSRGGDGGDGGWR 1696
Score = 25.4 bits (54), Expect = 4.0
Identities = 14/32 (43%), Positives = 16/32 (49%)
Frame = +2
Query: 85 TGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+G GGG G + GG G G G GGGG
Sbjct: 1550 SGGGGGGGGYRSRDGGYG-----GGYGGGGGG 1630
>TC224896 similar to UP|Q94EH8 (Q94EH8) At1g66260/T6J19_1, partial (28%)
Length = 1102
Score = 36.2 bits (82), Expect = 0.002
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 77 TKGTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
T+G GW G GSG+GG GG G G G+GG G
Sbjct: 245 TRGAGWGRRGGPRSGSGRGGAGGRG------RGRGRGGAG 346
Score = 27.7 bits (60), Expect = 0.81
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 67 GTIWDKDISITKGTGWQTTGRKGGGSGKGGKGGGG 101
G W + G+G G +G G G+GG GG G
Sbjct: 251 GAGWGRRGGPRSGSGRGGAGGRGRGRGRGGAGGRG 355
>BQ079492
Length = 426
Score = 35.8 bits (81), Expect = 0.003
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2
Query: 84 TTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
T R+GGG G GG+GGGGG G +GGGG
Sbjct: 371 TRRRRGGGRGGGGRGGGGG-----*GGRRGGGG 288
Score = 29.6 bits (65), Expect = 0.21
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYR 104
G + G +GGG G GG+ GGGG R
Sbjct: 353 GGRGGGGRGGGGG*GGRRGGGGGR 282
Score = 27.7 bits (60), Expect = 0.81
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 78 KGTGWQTTGRKGGGSGKGGKGGGGG 102
+G G GR GGG G +GGGGG
Sbjct: 359 RGGGRGGGGRGGGGG*GGRRGGGGG 285
>CA783317 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (23%)
Length = 159
Score = 34.3 bits (77), Expect = 0.009
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGGK 117
G GG G GG GGGGG G G GGGG+
Sbjct: 56 GGGGGEGGGGGGGGGGGGXXXGEGGGGGGGGR 151
Score = 34.3 bits (77), Expect = 0.009
Identities = 19/34 (55%), Positives = 21/34 (60%)
Frame = +1
Query: 83 QTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
+TTG+K G G GG GGGGG G G GGGG
Sbjct: 16 RTTGKKQAGGG-GGXGGGGG------GGGGGGGG 96
Score = 33.5 bits (75), Expect = 0.015
Identities = 18/38 (47%), Positives = 18/38 (47%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G G G GGG G GG GGGG G G GG G
Sbjct: 40 GGGGGXGGGGGGGGGGGGGGGGGXXEXRRRGGGGGGKG 153
Score = 33.1 bits (74), Expect = 0.019
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +2
Query: 86 GRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G GGG GG GGGGG G G GGGG
Sbjct: 50 GGGGGGGEGGGGGGGGGGGGXXXGEGGGGGG 142
Score = 32.3 bits (72), Expect = 0.033
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2
Query: 87 RKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
R GGG G GG G GGG G G GGGG
Sbjct: 35 RPGGGGGGGGGGEGGG------GGGGGGGG 106
Score = 31.6 bits (70), Expect = 0.056
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 79 GTGWQTTGRKGGGSGKGGKGGGGG-YRIPIPGVGKGGGG 116
G G G GG G GG GGGGG R G G GG G
Sbjct: 36 GRGGGGXGGGGGRGGGGGGGGGGGAXRXEKEGGGGGGEG 152
Score = 29.3 bits (64), Expect = 0.28
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 79 GTGWQTTGRKGGGSGKGGKGGGG--GYRIPIPGVGKGGG 115
G G G GGG G GG GGG R G GKGGG
Sbjct: 43 GGGGXGGGGGGGGGGGGGGGGGXXEXRRRGGGGGGKGGG 159
Score = 27.7 bits (60), Expect = 0.81
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +3
Query: 81 GWQTTGRKGGGSGKGGKGGGGGYRIPIPGVGKGGGG 116
G + RK G G GG GG GG R G G GGGG
Sbjct: 6 GEEENHRKKAGRGGGGXGG-GGGR----GGGGGGGG 98
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.143 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,765,121
Number of Sequences: 63676
Number of extensions: 100173
Number of successful extensions: 3705
Number of sequences better than 10.0: 671
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2657
length of query: 117
length of database: 12,639,632
effective HSP length: 93
effective length of query: 24
effective length of database: 6,717,764
effective search space: 161226336
effective search space used: 161226336
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 51 (24.3 bits)
Medicago: description of AC138451.8