BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137839.10 - phase: 0
(502 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227857 weakly similar to UP|Q8LA02 (Q8LA02) Contains similarit... 365 e-101
TC227858 similar to UP|MTR4_YEAST (P47047) ATP-dependent RNA hel... 201 5e-52
TC232151 similar to UP|G150_MOUSE (Q8BL07) Probable G protein-co... 138 6e-41
TC227859 104 1e-22
TC225776 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, par... 47 3e-05
TC232277 similar to UP|Q756S8 (Q756S8) AER176Wp, partial (7%) 47 3e-05
TC216337 similar to UP|Q7XJ13 (Q7XJ13) Chloroplast nucleoid DNA-... 47 3e-05
TC225778 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, par... 45 8e-05
TC225230 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein ... 45 1e-04
TC221563 similar to UP|O23702 (O23702) Dehydrogenase, partial (21%) 44 2e-04
TC232422 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment... 44 2e-04
TC217547 weakly similar to UP|Q61869 (Q61869) Keratin 2 epidermi... 42 6e-04
TC224592 similar to UP|Q93VA8 (Q93VA8) At1g76010/T4O12_22, parti... 42 8e-04
TC215074 similar to UP|O04237 (O04237) Transcription factor, par... 41 0.001
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 41 0.001
TC235092 similar to UP|O91332 (O91332) EBNA-1, partial (5%) 40 0.002
TC208462 homologue to UP|LSM4_TOBAC (Q43582) Probable U6 snRNA-a... 40 0.002
TC234067 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-ric... 39 0.004
TC219649 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich... 39 0.004
TC210426 similar to UP|Q9FK53 (Q9FK53) Similarity to GAR1 protei... 39 0.005
>TC227857 weakly similar to UP|Q8LA02 (Q8LA02) Contains similarity to
RNA-binding protein from Arabidopsis thaliana gi|2129727
and contains RNA recognition PF|00076 domain, partial
(37%)
Length = 995
Score = 365 bits (936), Expect = e-101
Identities = 187/274 (68%), Positives = 220/274 (80%), Gaps = 1/274 (0%)
Frame = +2
Query: 230 RQTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDG 289
+++P ++ D + +DDG +GRGR G GR RGRG RGRG GRG G
Sbjct: 2 KRSPIPSQEDATRNALKILSHGKDDGSDTGRGREYG-GRGGLDRGRG-RGRGRGRGRGMG 175
Query: 290 RGGF-KRYGDDRTSHQDIARSNADGLYVGDNADGEKLAKKLGPEIMDQITEAYEEIIERV 348
RG F +R D++ D A GLY GD+ADGEKLA+K+GPEIM+Q+TE +EE+ RV
Sbjct: 176 RGRFVERDVDEKVMDTD---DYATGLYAGDDADGEKLARKVGPEIMNQLTEGFEEMTSRV 346
Query: 349 LPSPLQDEYVEAMDINCAIEFEPEYAVEFDNPDIDEKEPIALRDALEKMKPFLMTYEGIR 408
LPSPL+DE+++A+DIN AIEFEPEY VEFDNPDIDEKEPI+LRDALEK KPFLM+YEGI+
Sbjct: 347 LPSPLEDEFLDALDINYAIEFEPEYLVEFDNPDIDEKEPISLRDALEKAKPFLMSYEGIQ 526
Query: 409 SQEEWEEVIEELMQRVPLLKKIVDHYSGPDRVTAKKQQEELERVAKTLPTSAPSSVKEFT 468
SQEEWEE++EE M RVPLLKKI+DHYSGPDRVTAKKQQEELERVAKTLP S PSSVK+FT
Sbjct: 527 SQEEWEEIMEETMARVPLLKKIIDHYSGPDRVTAKKQQEELERVAKTLPGSVPSSVKQFT 706
Query: 469 NRAVVSLQSNPGWGFDKKCQFMDKLVFEVSQHHK 502
NRAV+SLQSNPGWGFDKKC FMDKLV+EVSQH+K
Sbjct: 707 NRAVISLQSNPGWGFDKKCHFMDKLVWEVSQHYK 808
Score = 26.6 bits (57), Expect(2) = 3.0
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = +2
Query: 31 FGGGGGDGRGGGRGRG 46
+GG GG RG GRGRG
Sbjct: 104 YGGRGGLDRGRGRGRG 151
Score = 21.6 bits (44), Expect(2) = 3.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 87 GRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGR 124
GRG GRG G GRG GRGR
Sbjct: 131 GRGRGRGR--------------------GRGRGMGRGR 184
>TC227858 similar to UP|MTR4_YEAST (P47047) ATP-dependent RNA helicase DOB1
(mRNA transport regulator MTR4), partial (5%)
Length = 617
Score = 201 bits (512), Expect = 5e-52
Identities = 97/121 (80%), Positives = 111/121 (91%)
Frame = +3
Query: 356 EYVEAMDINCAIEFEPEYAVEFDNPDIDEKEPIALRDALEKMKPFLMTYEGIRSQEEWEE 415
E+++A+DIN AIEFEPEY VEFDNPDIDEKEPI LRDALEK KPFLM+YEGI+SQE WE+
Sbjct: 252 EFLDALDINYAIEFEPEYLVEFDNPDIDEKEPIPLRDALEKAKPFLMSYEGIQSQEVWEK 431
Query: 416 VIEELMQRVPLLKKIVDHYSGPDRVTAKKQQEELERVAKTLPTSAPSSVKEFTNRAVVSL 475
+EE M RVPLLKKIVDHYSGPDRVT KK+QEEL+RVAKTLP SAPSSV++FTNR+V+SL
Sbjct: 432 TMEETMARVPLLKKIVDHYSGPDRVTTKKRQEELDRVAKTLPESAPSSVEQFTNRSVISL 611
Query: 476 Q 476
Q
Sbjct: 612 Q 614
>TC232151 similar to UP|G150_MOUSE (Q8BL07) Probable G protein-coupled
receptor 150 (G protein-coupled receptor PGR11), partial
(5%)
Length = 659
Score = 138 bits (348), Expect(2) = 6e-41
Identities = 84/151 (55%), Positives = 97/151 (63%), Gaps = 4/151 (2%)
Frame = +1
Query: 1 MRGTIGVRLQNSTISNATRQTLVPFSTSSGFGGGGGDGRGGGRGRGGS--GTVTFNFGEK 58
MRGTIG+R+ N ISNATR+TLVPFSTSSGFGGGG GRGRGGS G+ FN E+
Sbjct: 130 MRGTIGIRIPNPNISNATRKTLVPFSTSSGFGGGGR-----GRGRGGSLPGSGLFNNNER 294
Query: 59 AAPGNPNPTPNVNESKPDATDSPIPPGAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGR 118
A PN +ESK D T+ PIPPG+G GHGRG +P SFSSF+SSI QP GR
Sbjct: 295 APV-----EPNSSESKSDTTEPPIPPGSGLGHGRGKPMPPSGLPSFSSFISSINQPPAGR 459
Query: 119 GRGRG--RGFDPLPPQFENDSVPKKPVFIKR 147
GRG D PP DS PKK F+++
Sbjct: 460 GRGTAPHPQHDLQPP----DSGPKKTHFLQK 540
Score = 47.8 bits (112), Expect(2) = 6e-41
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +2
Query: 139 PKKPVFIKREDNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKV 198
PKKP+F KRED+VS T +NDF PPK V D DN+ ++P V
Sbjct: 515 PKKPIFFKREDSVSPTASNDFLPPKRSV-----------------DHAHDNKLPGSIPGV 643
Query: 199 LPGGG 203
L G G
Sbjct: 644 LSGLG 658
Score = 30.0 bits (66), Expect = 2.5
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 201 GGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGR 260
GGGRGRG+ P + + N + R P +ES + P+ GSG
Sbjct: 226 GGGRGRGR-----GGSLPGSGLFNNNERAPVEPNSSESKSDTTEPPI-------PPGSGL 369
Query: 261 GRGRGR 266
G GRG+
Sbjct: 370 GHGRGK 387
>TC227859
Length = 1031
Score = 104 bits (259), Expect = 1e-22
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +3
Query: 356 EYVEAMDINCAIEFEPEYAVEFDNPDIDEKEPIALRDALEKMKPFLMTYEGIRSQEEWE 414
E+++A+DIN AIEFEPEY VEFDNPDIDEKEPI LRDALEK KPFLM+YEGI+SQE WE
Sbjct: 615 EFLDALDINYAIEFEPEYLVEFDNPDIDEKEPIPLRDALEKAKPFLMSYEGIQSQEVWE 791
>TC225776 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, partial (26%)
Length = 1663
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +1
Query: 189 NRFVMTVPKVLPGGGRGRGKPLEEAAQEAP--------QAPVVNRHIRVRQT-PADAESD 239
++ V T + G R G+P + +Q P A V ++ +T P DA +
Sbjct: 487 DKSVTTTTTDVSGPKRRPGRPPKNQSQPTPIPFAPADAAAAVGTEYVAAAETVPVDAAAA 666
Query: 240 NVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRG 291
PR + + D+ +GRGRGRG RGRGG GGRG GRG
Sbjct: 667 LGPRARGRPKKYADEMVAAGRGRGRG------------RGRGGGGGRGRGRG 786
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/68 (33%), Positives = 24/68 (34%), Gaps = 5/68 (7%)
Frame = +1
Query: 79 DSPIPPGAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSV 138
D + G GRG GRG G G GRGRGRG LP Q
Sbjct: 706 DEMVAAGRGRGRGRGR--------------------GGGGGRGRGRGRGQLPAQLRKSGA 825
Query: 139 -----PKK 141
PKK
Sbjct: 826 RPVGRPKK 849
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGRG 46
G G GGG GRG GRGRG
Sbjct: 742 GRGRGGGGGRGRGRGRG 792
Score = 29.3 bits (64), Expect = 4.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGR 45
G GGGGG GRG GRG+
Sbjct: 748 GRGGGGGRGRGRGRGQ 795
Score = 28.1 bits (61), Expect = 9.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 28 SSGFGGGGGDGRGGGRGRG 46
++G G G G GRGGG GRG
Sbjct: 718 AAGRGRGRGRGRGGGGGRG 774
>TC232277 similar to UP|Q756S8 (Q756S8) AER176Wp, partial (7%)
Length = 445
Score = 46.6 bits (109), Expect = 3e-05
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = -3
Query: 243 RRQPMNRFVRD--DGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDR 300
RR P+ R R DG G+ RGR RGRGR +G R RGG GGR G G R G R
Sbjct: 392 RRSPLRRGGRRGRDGGGAWRGRRRGRGR---RSRQGRRRRGGEGGRA*GAPGACRRGRGR 222
Query: 301 TSH-QDIARSNADGLYVGDNADG----EKLAKKLGP 331
H +D R GL + + E L + +GP
Sbjct: 221 F*HRRDGFRGRRSGLETEKSTNSRVW*ESLLRLVGP 114
>TC216337 similar to UP|Q7XJ13 (Q7XJ13) Chloroplast nucleoid DNA-binding
protein-like protein, partial (21%)
Length = 1139
Score = 46.6 bits (109), Expect = 3e-05
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 27/85 (31%)
Frame = +3
Query: 241 VPRRQPMNRFVRDDGDGS------GRGRGRGRGRDVY------------ARGRGDRGRG- 281
V + +P+N + ++G+GS GRGRGRGRGR Y RG G RGRG
Sbjct: 528 VDQVKPLNEY-EEEGEGSPRMRGRGRGRGRGRGRGFYNGGMEYGDDWDGGRGYGGRGRGR 704
Query: 282 --GRGGRGDGRG------GFKRYGD 298
GR RG GRG G+ YG+
Sbjct: 705 ARGRAFRGRGRGYGVQPVGYYDYGE 779
Score = 39.3 bits (90), Expect = 0.004
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 23/62 (37%)
Frame = +3
Query: 253 DDGDGS----GRGRGRGRGRDVYARGRG-------------------DRGRGGRGGRGDG 289
DD DG GRGRGR RGR RGRG RGRG GRG G
Sbjct: 657 DDWDGGRGYGGRGRGRARGRAFRGRGRGYGVQPVGYYDYGEYDAQPPPRGRGRGRGRGRG 836
Query: 290 RG 291
RG
Sbjct: 837 RG 842
Score = 37.7 bits (86), Expect = 0.012
Identities = 35/102 (34%), Positives = 41/102 (39%), Gaps = 4/102 (3%)
Frame = +3
Query: 34 GGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHGRG 93
G G GRG GRGRG +N G + + A A RG GRG
Sbjct: 591 GRGRGRGRGRGRG-----FYNGGMEYGDDWDGGRGYGGRGRGRARGR-----AFRGRGRG 740
Query: 94 GTVPDFPSFSFSSFMSSIQQP----GTGRGRGRGRGFDPLPP 131
V + + + Q P G GRGRGRGRG D PP
Sbjct: 741 YGVQPVGYYDYGEY--DAQPPPRGRGRGRGRGRGRGRDRGPP 860
Score = 31.6 bits (70), Expect = 0.87
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 255 GDGSGRGRGRGRGRD 269
G G GRGRGRGRGRD
Sbjct: 804 GRGRGRGRGRGRGRD 848
Score = 29.6 bits (65), Expect = 3.3
Identities = 24/78 (30%), Positives = 33/78 (41%), Gaps = 8/78 (10%)
Frame = +3
Query: 57 EKAAPGNPNPTP-----NVNESKPDATDSPIPPGAGRGHGRG---GTVPDFPSFSFSSFM 108
+ ++ G +P P +NE + + SP G GRG GRG G + +
Sbjct: 492 DTSSAGYQHPLPVDQVKPLNEYEEEGEGSPRMRGRGRGRGRGRGRGFYNGGMEYG-DDWD 668
Query: 109 SSIQQPGTGRGRGRGRGF 126
G GRGR RGR F
Sbjct: 669 GGRGYGGRGRGRARGRAF 722
Score = 28.9 bits (63), Expect = 5.6
Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 254 DGDGSGRGRGRGRGRDVYARGRG-DRG 279
D RGRGRGRGR RGRG DRG
Sbjct: 783 DAQPPPRGRGRGRGR---GRGRGRDRG 854
>TC225778 similar to UP|Q93YH8 (Q93YH8) HMG I/Y like protein, partial (12%)
Length = 417
Score = 45.1 bits (105), Expect = 8e-05
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Frame = +1
Query: 201 GGGRGRGKPLEEAAQEA--PQAPVVN------RHIRV--RQTPADAESDNVPRRQPMNRF 250
G R G+P + +Q P AP V+ H+ P DA++ PR + +
Sbjct: 4 GPKRRPGRPPKNQSQPTLIPFAPAVSAASVDTEHVAASAETAPVDADAALGPRARGRPKK 183
Query: 251 VRDDGDGSGRGRGRGRGRDVYARGRGDRGRG 281
D+ +GRGRGRGRGR RGRG RGRG
Sbjct: 184 YADEMIAAGRGRGRGRGRGGGGRGRG-RGRG 273
Score = 34.3 bits (77), Expect = 0.13
Identities = 26/80 (32%), Positives = 31/80 (38%)
Frame = +1
Query: 79 DSPIPPGAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSV 138
D I G GRG GRG + G GRGRGRGRG P P+
Sbjct: 190 DEMIAAGRGRGRGRG-------------------RGGGGRGRGRGRGELPAQPRKPGARP 312
Query: 139 PKKPVFIKREDNVSQTDAND 158
+P + SQ AN+
Sbjct: 313 VGRPKKGPTSASTSQNAANE 372
>TC225230 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (Fibrillarin
2) (AtFib2), partial (66%)
Length = 773
Score = 44.7 bits (104), Expect = 1e-04
Identities = 34/81 (41%), Positives = 40/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 253 DDGDG-SGRGRGRGRGRDVYARGRGDRGRGGRGG-RGDGRGGFKRYGDDRTSHQDIARSN 310
D G G G GRG RG ARG G RG GGRGG RG GRGG R G S +
Sbjct: 91 DRGRGRGGGGRGGDRGTPFKARG-GGRGGGGRGGGRGGGRGG-GRGGMKGGSKVVVQPHR 264
Query: 311 ADGLYVGDNADGEKLAKKLGP 331
DG+++ + + K L P
Sbjct: 265 HDGIFIAKGKEDALVTKNLVP 327
Score = 36.2 bits (82), Expect = 0.035
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 22 LVPFSTSSGFGGGGGDGRGG----GRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDA 77
+ P GFGGGGG GG GRGRGG G G++ P +
Sbjct: 25 MAPPRGRGGFGGGGGFRGGGRGDRGRGRGGGG----RGGDRGTPFKARGGGRGGGGRGGG 192
Query: 78 TDSPIPPGAGRGHGRGG 94
G GRG GRGG
Sbjct: 193R------GGGRGGGRGG 225
Score = 32.7 bits (73), Expect = 0.39
Identities = 29/84 (34%), Positives = 33/84 (38%), Gaps = 7/84 (8%)
Frame = +1
Query: 18 TRQTLVPFSTSSGFGG--GGGDGRGG-----GRGRGGSGTVTFNFGEKAAPGNPNPTPNV 70
TR L + G GG GGG RGG GRGRGG G G++ P
Sbjct: 4 TRPQLPKMAPPRGRGGFGGGGGFRGGGRGDRGRGRGGGG----RGGDRGTPFKARGGGRG 171
Query: 71 NESKPDATDSPIPPGAGRGHGRGG 94
+ G GRG GRGG
Sbjct: 172GGGR----------GGGRGGGRGG 213
>TC221563 similar to UP|O23702 (O23702) Dehydrogenase, partial (21%)
Length = 486
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/51 (50%), Positives = 26/51 (50%)
Frame = -3
Query: 242 PRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
PRR R R G G RGR R RGR RG G R GG G RG GR G
Sbjct: 382 PRRARCRRG-RGGGRGQRRGRSRRRGRRTQGRG*GGRSGGGAGRRGGGRRG 233
>TC232422 weakly similar to UP|Q41645 (Q41645) Extensin (Fragment), partial
(11%)
Length = 637
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/77 (37%), Positives = 35/77 (44%), Gaps = 12/77 (15%)
Frame = -3
Query: 228 RVRQTPADAESDNVPRRQP--------MNRFVRDDGDGSG----RGRGRGRGRDVYARGR 275
R+ Q A + P RQP + R ++G G G R RG G G RG
Sbjct: 269 RIEQKRALRATRGHPMRQPRLLRLWGCLERVKVEEGQGGGEEDERDRGGGGGEGRIGRGG 90
Query: 276 GDRGRGGRGGRGDGRGG 292
G GR GRGG G+GR G
Sbjct: 89 GGEGRTGRGGGGEGRTG 39
Score = 35.8 bits (81), Expect = 0.046
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 252 RDDGDGSGRGR-GRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
RD G G G GR GRG G G G GRGG G GRGG
Sbjct: 137 RDRGGGGGEGRIGRGGG------GEGRTGRGGGGEGRTGRGG 30
Score = 30.0 bits (66), Expect = 2.5
Identities = 14/22 (63%), Positives = 15/22 (67%), Gaps = 4/22 (18%)
Frame = -3
Query: 32 GGGGGDGR----GGGRGRGGSG 49
GGGGG+GR GGG GR G G
Sbjct: 128 GGGGGEGRIGRGGGGEGRTGRG 63
Score = 29.6 bits (65), Expect = 3.3
Identities = 17/31 (54%), Positives = 18/31 (57%), Gaps = 7/31 (22%)
Frame = -3
Query: 33 GGGGDGR----GGGR---GRGGSGTVTFNFG 56
GGGG+GR GGG GRGG G TF G
Sbjct: 95 GGGGEGRTGRGGGGEGRTGRGGGGGSTFGGG 3
>TC217547 weakly similar to UP|Q61869 (Q61869) Keratin 2 epidermis, partial
(8%)
Length = 700
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/67 (41%), Positives = 33/67 (48%)
Frame = +1
Query: 257 GSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQDIARSNADGLYV 316
G GRGRGRGRGR Y RGD R + G GG R+G + T D SN G V
Sbjct: 106 GGGRGRGRGRGRGSY-NNRGDNSNNER--QDSGYGG--RWGSNNTKDSDDGLSNFPGAKV 270
Query: 317 GDNADGE 323
++ E
Sbjct: 271 QNSPGRE 291
Score = 32.0 bits (71), Expect = 0.66
Identities = 22/69 (31%), Positives = 28/69 (39%), Gaps = 4/69 (5%)
Frame = +1
Query: 30 GFGGGGGDGRG----GGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
G+GGGGG G G GG G G S + +G +A+ G S + G
Sbjct: 304 GWGGGGGSGGGSSGWGGGGGGASNSDNGGWGGQASGGAGPSDGEQGSSGWGSAPKKAASG 483
Query: 86 AGRGHGRGG 94
G G G G
Sbjct: 484 NGWGSGNSG 510
Score = 31.2 bits (69), Expect = 1.1
Identities = 29/104 (27%), Positives = 37/104 (34%), Gaps = 13/104 (12%)
Frame = +1
Query: 4 TIGVRLQNSTISNATRQTLVPFSTSSGFGGGGGDGRGGGRGR-GGSGTVTFNFGEKAAPG 62
T G R N Q P +GGG G GRG GRG G + N + + G
Sbjct: 22 TPGSRTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGRGSYNNRGDNSNNERQDSGYG 201
Query: 63 NPNPTPNVNESKPDATDSP------------IPPGAGRGHGRGG 94
+ N +S ++ P P G G G G GG
Sbjct: 202 GRWGSNNTKDSDDGLSNFPGAKVQNSPGREAFPGGWGGGGGSGG 333
Score = 29.6 bits (65), Expect = 3.3
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +1
Query: 28 SSGFGGGGG------DGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSP 81
SSG+GGGGG +G GG+ GG+G + GE+ + G S P S
Sbjct: 337 SSGWGGGGGGASNSDNGGWGGQASGGAGP---SDGEQGSSG--------WGSAPKKAASG 483
Query: 82 IPPGAGRGHGRG 93
G+G GRG
Sbjct: 484 NGWGSGNSGGRG 519
>TC224592 similar to UP|Q93VA8 (Q93VA8) At1g76010/T4O12_22, partial (63%)
Length = 1120
Score = 41.6 bits (96), Expect = 8e-04
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 14/59 (23%)
Frame = +1
Query: 253 DDGDGSGRGRGRGRGRDVYARGRG-------DRGRGGRG-------GRGDGRGGFKRYG 297
D G+ RGRGRGRGR RGRG D GG GRG GRGG++ G
Sbjct: 622 DRNRGNARGRGRGRGRGFRGRGRGGYNGPHVDMQDGGYNQDVPQGRGRGRGRGGYRGRG 798
Score = 41.6 bits (96), Expect = 8e-04
Identities = 28/68 (41%), Positives = 30/68 (43%), Gaps = 1/68 (1%)
Frame = +1
Query: 231 QTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGR 290
Q A + D P R G G GRGRG G Y G DR RG GRG GR
Sbjct: 484 QVKAATDFDYEGEGSPNGRVRGRGGRGRGRGRGNGFISADYEDGGWDRNRGNARGRGRGR 663
Query: 291 G-GFKRYG 297
G GF+ G
Sbjct: 664 GRGFRGRG 687
Score = 34.7 bits (78), Expect = 0.10
Identities = 29/95 (30%), Positives = 35/95 (36%)
Frame = +1
Query: 32 GGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHG 91
G G GRG GRG G G +N P+V + + + +P G GRG G
Sbjct: 634 GNARGRGRGRGRGFRGRGRGGYN------------GPHV-DMQDGGYNQDVPQGRGRGRG 774
Query: 92 RGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGF 126
RGG RGRGRGF
Sbjct: 775 RGGY------------------------RGRGRGF 807
Score = 31.6 bits (70), Expect = 0.87
Identities = 17/42 (40%), Positives = 21/42 (49%)
Frame = +1
Query: 85 GAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGF 126
G GRG G G D+ + + + GRGRGRGRGF
Sbjct: 562 GRGRGRGNGFISADYEDGGWDRNRGNAR----GRGRGRGRGF 675
Score = 29.3 bits (64), Expect = 4.3
Identities = 23/60 (38%), Positives = 25/60 (41%)
Frame = +1
Query: 254 DGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQDIARSNADG 313
D D G G GR RGRG RGRG G G ++ G DR R NA G
Sbjct: 502 DFDYEGEGSPNGR-----VRGRGGRGRGRGRGNGFISADYEDGGWDRN------RGNARG 648
>TC215074 similar to UP|O04237 (O04237) Transcription factor, partial (88%)
Length = 1720
Score = 41.2 bits (95), Expect = 0.001
Identities = 75/346 (21%), Positives = 122/346 (34%), Gaps = 35/346 (10%)
Frame = +1
Query: 172 DVRPVEPIDLSGDSESDNRFVMTVP--KVLPGGGRGRGKPLEEAAQEAPQAPVVNRHIRV 229
++ P DL GD D ++ K P + AQ+ A + ++ +
Sbjct: 241 EMATTNPFDLLGDDAEDPSQLIAAEQLKAAAAAAAATAAPKKAPAQQIKPAQLPSKPLPP 420
Query: 230 RQTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRG--RDVY---------------- 271
Q DA +++V R R G G GRG GRGRG RD
Sbjct: 421 AQAVRDARNESV-------RGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSGAPYNQV 579
Query: 272 ----ARGRGDRGRGGRGGRGDGRGGFKRYG---DDRTSHQDIAR-----SNADGLYVGDN 319
G+ RG G RG RGG R G + T + R G G+
Sbjct: 580 SFEGDAGKSSERRGYGGPRGPYRGGGGRRGGFSNGETGEAEEGRPRRAFDRRSGTGRGNE 759
Query: 320 ADGEKLAKKLGPEIMDQITEAYEEIIERVLPSPLQDEYVEAMDINCAIEFEPEYAVEFDN 379
E + D++ + +E+ + ++ D+ + P E
Sbjct: 760 FKREGSGRGNWGAQTDELAQVTDEVANETEKNLGDEKPAVEEDVADGNKDSPTNETEEKE 939
Query: 380 PDIDEKEPIALRDALEKMKPFLMTYEGIRSQEEWEEVIE-ELMQRVPLLKKIVDHY--SG 436
P+ E LE+ + ++ ++++E + E E MQ + K D + G
Sbjct: 940 PEDKEMTLEEYEKVLEERR---KAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLG 1110
Query: 437 PDRVTAKKQQEELERVAKTLPTSAPSSVKEFTNRAVVSLQSNPGWG 482
D+ K+ E+ E+ K++ S+ EF A NPG G
Sbjct: 1111SDKDKRKEAFEKEEKSKKSV------SITEFLKPAEGEAYYNPGRG 1230
Score = 35.0 bits (79), Expect = 0.078
Identities = 74/301 (24%), Positives = 107/301 (34%), Gaps = 41/301 (13%)
Frame = +1
Query: 26 STSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVN-------ESKPDAT 78
S G GGG G GRG GRGRG S + + E + P + P V+ S+
Sbjct: 451 SVRGGRGGGRGGGRGFGRGRGFSRDSSND--ENSFPTSGAPYNQVSFEGDAGKSSERRGY 624
Query: 79 DSPIPPGAGRGHGRGG--------TVPDFPSFSFSSFMSSIQQPGTGRG-----RGRGRG 125
P P G G RGG P +F ++ GTGRG G GRG
Sbjct: 625 GGPRGPYRGGGGRRGGFSNGETGEAEEGRPRRAFD------RRSGTGRGNEFKREGSGRG 786
Query: 126 ------------FDPLPPQFENDSVPKKPVFIKREDNVSQTDANDFSPPKNPVFTRSEDV 173
D + + E + +KP E++V+ D N SP + +
Sbjct: 787 NWGAQTDELAQVTDEVANETEKNLGDEKPAV---EEDVA--DGNKDSP--------TNET 927
Query: 174 RPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGRGK--PLEEAAQEAPQAPVVNRHIRV-- 229
EP D E + + K K E + +A + N I +
Sbjct: 928 EEKEPEDKEMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKL 1107
Query: 230 -----RQTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRG 284
++ A + + + + F++ + GRGRG RGRG RG GG
Sbjct: 1108GSDKDKRKEAFEKEEKSKKSVSITEFLKPAEGEAYYNPGRGRG-----RGRGSRGGGGYH 1272
Query: 285 G 285
G
Sbjct: 1273G 1275
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 40.8 bits (94), Expect = 0.001
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = +2
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G G G G + RG GRGGRGG G G GG
Sbjct: 167 GGGGGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGGGG 280
Score = 37.4 bits (85), Expect = 0.016
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +2
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G GRG G G G G G+GG GG G G GG
Sbjct: 80 GGGGGGGRGGGGGGGGGGGGGGGGGKGGGGGGGGGGGG 193
Score = 36.2 bits (82), Expect = 0.035
Identities = 31/96 (32%), Positives = 32/96 (33%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
G GGGGG G GGGRG GG G G G E + G G G
Sbjct: 117 GGGGGGGGGGGGGRGGGGGG----GGGGGGGGGGGGGFLGGREXXGGGGEGGGGGGGGGG 284
Query: 90 HGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRG 125
G GG G G GRG G G
Sbjct: 285 GGGGGX------------------GGGGGGRGEGGG 338
Score = 35.8 bits (81), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGGRG GG G
Sbjct: 62 GGGGGGGGGGGGGRGGGGGG 121
Score = 35.8 bits (81), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG GRGG G
Sbjct: 111 GGGGGGGGGGGGGGGRGGGG 170
Score = 35.8 bits (81), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG GRGG G
Sbjct: 46 GGGGGGGGGGGGGGGRGGEG 105
Score = 35.8 bits (81), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG GRGG G
Sbjct: 56 GGGGGGGGGGGGGGGRGGGG 115
Score = 35.8 bits (81), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG GRGGG G GG G
Sbjct: 74 GGGGGGGGGRGGGGGGGGGG 133
Score = 35.4 bits (80), Expect = 0.060
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 25 FSTSSGFGGGGGDGRGGGRGRGGSG 49
F+ G GGGGG G GGG G GG G
Sbjct: 14 FARGGGGGGGGGGGGGGGGGGGGGG 88
Score = 35.4 bits (80), Expect = 0.060
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +1
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGR 290
G G G G G G G RG G G GG GG G+GR
Sbjct: 274 GGGGGGGGGXGGGGGGGGRGGGGGGGGGGGGGGEGR 381
Score = 35.0 bits (79), Expect = 0.078
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +3
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDD 299
G G G G GRG G G G GG GG G G GG +R G +
Sbjct: 288 GGGGXGGGGGGRG-----EGGGGGGGGGGGGGGGGEGGGRRGGGE 407
Score = 34.7 bits (78), Expect = 0.10
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +1
Query: 32 GGGGGDGRGGGRGRGGSG 49
GGGGG GRGGG G GG G
Sbjct: 307 GGGGGGGRGGGGGGGGGG 360
Score = 34.7 bits (78), Expect = 0.10
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +1
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRG 291
G G G G G G G GRG G GG GG G G G
Sbjct: 268 GGGGGGGGGGGXGGGGGGGGRGGGGGGGGGGGGGGEG 378
Score = 34.7 bits (78), Expect = 0.10
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 255 GDGSGRGRGRGRGRDVYARG-RGDRGRGGRGGRGDGRGG 292
G G G G G RG RG RG G GG GG G G GG
Sbjct: 188 GGGGGGGGGFFRGERXXGRGGRGGGGGGGGGGGGGGGGG 304
Score = 34.3 bits (77), Expect = 0.13
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG+G GGG G GG G
Sbjct: 299 GGGGGGGEGGGGGGGGGGGG 358
Score = 34.3 bits (77), Expect = 0.13
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG+G GGG G GG G
Sbjct: 69 GGGGGGGEGGGGGGGGGGGG 128
Score = 34.3 bits (77), Expect = 0.13
Identities = 15/27 (55%), Positives = 16/27 (58%)
Frame = +3
Query: 23 VPFSTSSGFGGGGGDGRGGGRGRGGSG 49
+P G GGGGG G GGG G GG G
Sbjct: 15 LPGGGGGGGGGGGGGGGGGGGGGGGEG 95
Score = 33.9 bits (76), Expect = 0.17
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 293 GGGGGGGGGEGGGGGGGGGG 352
Score = 33.9 bits (76), Expect = 0.17
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 281 GGGGGGGGGGGGGEGGGGGG 340
Score = 33.9 bits (76), Expect = 0.17
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 45 GGGGGGGGGGGGGGGEGGGG 104
Score = 33.9 bits (76), Expect = 0.17
Identities = 23/63 (36%), Positives = 24/63 (37%)
Frame = +3
Query: 32 GGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHG 91
GGGGG G GGG G GG G F G + G G GRG G
Sbjct: 162 GGGGGGGGGGGGGGGGGG---FLGGREXXGGGGEGGGGGGGGGGGGGGGXGGGGGGRGEG 332
Query: 92 RGG 94
GG
Sbjct: 333 GGG 341
Score = 33.9 bits (76), Expect = 0.17
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 51 GGGGGGGGGGGGGEGGGGGG 110
Score = 33.5 bits (75), Expect = 0.23
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGG 47
G GGGGG G GGG GRGG
Sbjct: 329 GGGGGGGGGGGGGGGRGG 382
Score = 33.5 bits (75), Expect = 0.23
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +1
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGSG 49
P G GGGGG G GGG G GG G
Sbjct: 19 PGGGGGGGGGGGGGGGGGGGGGGGRG 96
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG GRGG R GG G
Sbjct: 347 GGGGGGGGGRGGRREEGGGG 406
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 93 GGGGGGGGGGGGGGGGGGGG 152
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 41 GGGGGGGGGGGGGGGGGGGG 100
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 96 GGGGGGGGGGGGGGGGGGGG 155
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 324 GEGGGGGGGGGGGGGGGGEG 383
Score = 33.1 bits (74), Expect = 0.30
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 87 GEGGGGGGGGGGGGGGGGGG 146
Score = 32.7 bits (73), Expect = 0.39
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 80 GGGGGGGRGGGGGGGGGGGG 139
Score = 32.7 bits (73), Expect = 0.39
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 307 GGGGGGGRGGGGGGGGGGGG 366
Score = 32.7 bits (73), Expect = 0.39
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G GG G
Sbjct: 102 GGGGGGGGGGGGGGGGGGRG 161
Score = 32.3 bits (72), Expect = 0.51
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G+G G G G G G G G G GG GGRG+G GG
Sbjct: 249 GEGGGGGGGGGGG------GGGGXGGGG-GGRGEGGGG 341
Score = 31.6 bits (70), Expect = 0.87
Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = +3
Query: 30 GFGGGGGDGR---GGGRGRGGSG 49
G GGGGG G GGGRG GG G
Sbjct: 273 GGGGGGGGGXGGGGGGRGEGGGG 341
Score = 31.6 bits (70), Expect = 0.87
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGR--GGSG 49
G GGGGG G GGG GR GG G
Sbjct: 334 GGGGGGGGGGGGGEGREEGGGG 399
Score = 31.6 bits (70), Expect = 0.87
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGG 47
G GGGGG G GGG G GG
Sbjct: 333 GGGGGGGGGGGGGGGEGG 386
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGG G+G GGG G GG G
Sbjct: 306 GGGGGRGEGGGGGGGGGGGG 365
Score = 31.2 bits (69), Expect = 1.1
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGF 293
G G G GRG G G G GG GG G G GGF
Sbjct: 135 GGGGGGGRGGGGG-----------GGGGGGGGGGGGGGF 218
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGG G GGG G GG G
Sbjct: 12 GLPGGGGGGGGGGGGGGGGG 71
Score = 30.8 bits (68), Expect = 1.5
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGG 47
G GGGGG G GGG G GG
Sbjct: 317 GEGGGGGGGGGGGGGGGG 370
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGG G GGG G GG G
Sbjct: 302 GGGGGGEGGGGGGGGGGGGG 361
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG GGG G GG G
Sbjct: 77 GGGGGGGGRGGGGGGGGGGG 136
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG GGG G GG G
Sbjct: 296 GGGGGGGGEGGGGGGGGGGG 355
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGG G GGG G GG G
Sbjct: 72 GGGGGGEGGGGGGGGGGGGG 131
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G G G
Sbjct: 107 GGGGGGGGGGGGGGGGKGGG 166
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG GGG G GG G
Sbjct: 66 GGGGGGGGEGGGGGGGGGGG 125
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGGG G GGG G G G
Sbjct: 330 GGGGGGGGGGGGGGGGEGGG 389
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G G GGG G GGG G GG G
Sbjct: 319 GGGRGGGGGGGGGGGGGGEG 378
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G G GGG G GGG G GG G
Sbjct: 318 GRGEGGGGGGGGGGGGGGGG 377
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGG G G GGG G GG G
Sbjct: 313 GGGGGRGGGGGGGGGGGGGG 372
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GGGG G GGG G GG G
Sbjct: 84 GGEGGGGGGGGGGGGGGGGG 143
Score = 30.0 bits (66), Expect = 2.5
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G G GGG G GGG G GG G
Sbjct: 311 GGGEGGGGGGGGGGGGGGGG 370
>TC235092 similar to UP|O91332 (O91332) EBNA-1, partial (5%)
Length = 641
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/43 (58%), Positives = 28/43 (64%), Gaps = 2/43 (4%)
Frame = -2
Query: 262 RGRGRGRDVYARGRGDRGR--GGRGGRGDGRGGFKRYGDDRTS 302
RGR GR + AR RG RGR G RGGRG+GR G +R G R S
Sbjct: 187 RGRVSGRILGAR-RGARGRSRGRRGGRGEGRSGRRRNGQGRRS 62
Score = 28.1 bits (61), Expect = 9.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 257 GSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQDI 306
G RGR GRG GR R R G+G R G+ R + + +D+
Sbjct: 139 GRSRGRRGGRG-----EGRSGRRRNGQGRRSSGKWRVFRVLERLVAQEDL 5
>TC208462 homologue to UP|LSM4_TOBAC (Q43582) Probable U6 snRNA-associated
Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10),
partial (94%)
Length = 794
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = +3
Query: 252 RDDGDGSGRGRGRGRGRDVYA-RGRGDRGRGGRGG-----RGDGRG 291
R+DG G + +G GRG D +G+G RGRGG GG RG GRG
Sbjct: 432 REDGPGGRQPKGIGRGLDEGGPKGQGGRGRGGPGGKPGGNRGGGRG 569
Score = 36.6 bits (83), Expect = 0.027
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 18/64 (28%)
Frame = +3
Query: 252 RDDGDGSGRGRGRGRGR-----------------DVYARGRGDRGRGGRGGR-GDGRGGF 293
R D G GRGRGRGR + +G+G RGRGG GG+ G RGG
Sbjct: 384 RTDRKPPGVGRGRGRGREDGPGGRQPKGIGRGLDEGGPKGQGGRGRGGPGGKPGGNRGGG 563
Query: 294 KRYG 297
+ G
Sbjct: 564 RGRG 575
Score = 28.9 bits (63), Expect = 5.6
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 34 GGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHGRG 93
G G GRG GR G G G G P P PG RG GRG
Sbjct: 405 GVGRGRGRGREDGPGGRQPKGIGRGLDEGGPKGQGGRGRGGPGG-----KPGGNRGGGRG 569
Score = 28.5 bits (62), Expect = 7.3
Identities = 25/72 (34%), Positives = 26/72 (35%), Gaps = 16/72 (22%)
Frame = +3
Query: 70 VNESKPDATDSPIPPGAGRGHGR------GGTVPDFPSFSFSSFMSSIQ----------Q 113
V E TD PPG GRG GR GG P Q +
Sbjct: 363 VQEETKSRTDRK-PPGVGRGRGRGREDGPGGRQPKGIGRGLDEGGPKGQGGRGRGGPGGK 539
Query: 114 PGTGRGRGRGRG 125
PG RG GRGRG
Sbjct: 540 PGGNRGGGRGRG 575
>TC234067 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich
glycoprotein DZ-HRGP precursor, partial (8%)
Length = 614
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = -1
Query: 220 APVVNRHIRVRQTPA---DAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRG 276
+P++NR V + + DAE+ + F GDG R R RG G A GRG
Sbjct: 299 SPLINRACSVSSSSSSQNDAETTDERFDHKTFTFEHHGGDGGERERLRGGG----A*GRG 132
Query: 277 D-RGRGGRGGRGDGRGGFKR 295
D GRGG G G+ RGG R
Sbjct: 131 DGAGRGGGEGGGERRGGSAR 72
Score = 28.1 bits (61), Expect = 9.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 30 GFGGGGGDGRGGGRGRGGS 48
G G G G G GGG RGGS
Sbjct: 134 GDGAGRGGGEGGGERRGGS 78
>TC219649 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich protein,
partial (37%)
Length = 750
Score = 39.3 bits (90), Expect = 0.004
Identities = 39/106 (36%), Positives = 43/106 (39%), Gaps = 5/106 (4%)
Frame = -1
Query: 28 SSGFGGG-GGD-GRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
S G+GGG GGD G GGG GG+G G A PG+ P P G
Sbjct: 498 SGGYGGGPGGDAGPGGGGPGGGAGPGGGEPGSGAGPGSGG-----YGGGPGGGVGPGGGG 334
Query: 86 AGRGHGRGGTVPDF---PSFSFSSFMSSIQQPGTGRGRGRGRGFDP 128
G G GRGG P PS S +PG G G G G P
Sbjct: 333 PGGGAGRGGGGPGSGAGPSGGGPGGGSYGGEPGGGGPGGDGYGGGP 196
Score = 37.4 bits (85), Expect = 0.016
Identities = 31/96 (32%), Positives = 36/96 (37%)
Frame = -1
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
S G+GGG G G G G GSG + G PG + P A PG+G
Sbjct: 576 SGGYGGGPGGDTGPGGGEPGSGAGPGSGGYGGGPGG-DAGPGGGGPGGGAGPGGGEPGSG 400
Query: 88 RGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRG 123
G G GG + PG G GRG G
Sbjct: 399 AGPGSGG----YGGGPGGGVGPGGGGPGGGAGRGGG 304
Score = 36.2 bits (82), Expect = 0.035
Identities = 26/69 (37%), Positives = 29/69 (41%), Gaps = 2/69 (2%)
Frame = -1
Query: 28 SSGFGGG--GGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
S G+GGG GG G GGG GG+G G A P P +P P G
Sbjct: 387 SGGYGGGPGGGVGPGGGGPGGGAGRGGGGPGSGAGPSGGGPGGGSYGGEPGGGG---PGG 217
Query: 86 AGRGHGRGG 94
G G G GG
Sbjct: 216 DGYGGGPGG 190
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/79 (32%), Positives = 28/79 (34%), Gaps = 8/79 (10%)
Frame = -1
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESK------PDA 77
P G G GGG G GGG GG G A PG P + P
Sbjct: 705 PVGGGYGGGPGGGAGSGGGSYGGGP-------GGDAGPGGGGPGGSAGPGSGGYGGGPGG 547
Query: 78 TDSP--IPPGAGRGHGRGG 94
P PG+G G G GG
Sbjct: 546 DTGPGGGEPGSGAGPGSGG 490
Score = 29.3 bits (64), Expect = 4.3
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Frame = -1
Query: 30 GFGGGGGDGRGG----GRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
G G GGG G GG G G GG G + G P P + P G
Sbjct: 747 GGGPGGGVGPGGGGPVGGGYGGGPGGGAGSGGGSYGGGPGGDAGPGGGGPGGSAGPGSGG 568
Query: 86 AGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRG 123
G G G G T P +PG+G G G G
Sbjct: 567 YGGGPG-GDTGP------------GGGEPGSGAGPGSG 493
Score = 29.3 bits (64), Expect = 4.3
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1
Query: 30 GFGGGGGDGRGGGRGRGGSG 49
G GG GGDG GGG G GG+G
Sbjct: 237 GGGGPGGDGYGGGPG-GGAG 181
Score = 28.1 bits (61), Expect = 9.6
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 253 DDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
+ G G+G G G G G G G GG GRG G G
Sbjct: 414 EPGSGAGPGSGGYGGGPGGGVGPGGGGPGGGAGRGGGGPG 295
Score = 28.1 bits (61), Expect = 9.6
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = -1
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIP 83
P G G G G G G GSG G PG P P
Sbjct: 459 PGGGGPGGGAGPGGGEPGSGAGPGSGGYGGGPGGGVGPGGGGPGGGAGRGGGGPGSGAGP 280
Query: 84 PGAGRGHGRGGTVP 97
G G G G G P
Sbjct: 279 SGGGPGGGSYGGEP 238
>TC210426 similar to UP|Q9FK53 (Q9FK53) Similarity to GAR1 protein, partial
(50%)
Length = 434
Score = 38.9 bits (89), Expect = 0.005
Identities = 25/56 (44%), Positives = 26/56 (45%)
Frame = +3
Query: 245 QPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDR 300
QP + G G GRG GRG GRG G GRGG GRGG R G R
Sbjct: 210 QPKGQSAGRGGGGGGRGGGRG--------GRGGGGFRGRGGPRGGRGGPPRGGGFR 353
Score = 37.4 bits (85), Expect = 0.016
Identities = 20/41 (48%), Positives = 22/41 (52%)
Frame = +3
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNP 64
P S+G GGGGG GRGGGRG G G G + G P
Sbjct: 213 PKGQSAGRGGGGG-GRGGGRGGRGGGGFRGRGGPRGGRGGP 332
Score = 37.0 bits (84), Expect = 0.021
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 246 PMNRFV-RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
P+ RF+ + G +GRG G G GR GRG RG GG GRG RGG
Sbjct: 189 PLARFLPQPKGQSAGRGGGGG-GR---GGGRGGRGGGGFRGRGGPRGG 320
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,583,831
Number of Sequences: 63676
Number of extensions: 275337
Number of successful extensions: 7881
Number of sequences better than 10.0: 503
Number of HSP's better than 10.0 without gapping: 3640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6386
length of query: 502
length of database: 12,639,632
effective HSP length: 101
effective length of query: 401
effective length of database: 6,208,356
effective search space: 2489550756
effective search space used: 2489550756
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC137839.10