BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133709.13 - phase: 0
(557 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225162 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammon... 930 0.0
TC216852 UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 ,... 927 0.0
TC225168 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammon... 758 0.0
TC209668 homologue to UP|PAL2_CICAR (Q9SMK9) Phenylalanine ammon... 551 e-157
TC216855 homologue to PRF|1807329B.0|228615|1807329B Phe ammonia... 267 6e-83
TC225165 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammon... 295 3e-80
AW348884 similar to PIR|JQ1070|JQ1 phenylalanine ammonia-lyase (... 167 9e-42
TC216854 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammon... 161 6e-40
AW351185 homologue to PIR|JQ1070|JQ10 phenylalanine ammonia-lyas... 159 3e-39
AW351172 similar to SP|P19143|PAL3 Phenylalanine ammonia-lyase c... 157 9e-39
AW757191 similar to SP|P19142|PAL2 Phenylalanine ammonia-lyase c... 155 6e-38
AW459068 similar to SP|Q43052|PAL2_ Phenylalanine ammonia-lyase ... 91 2e-18
AI938628 similar to SP|P19142|PAL2_ Phenylalanine ammonia-lyase ... 87 1e-17
TC216853 UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 ,... 63 4e-10
BE441027 31 1.3
TC227986 weakly similar to UP|Q75K31 (Q75K31) Expressed protein,... 31 1.3
NP004776 cytochrome P450 H2O2-dependent urate-degrading peroxidase 30 2.2
TC211696 homologue to UP|Q9ARC5 (Q9ARC5) Membrane transporter, c... 30 3.7
BE021410 similar to GP|28395459|gb ubiquitin/ribosomal fusion pr... 29 6.3
BU577761 28 8.2
>TC225162 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammonia-lyase class
II , partial (97%)
Length = 2519
Score = 930 bits (2403), Expect = 0.0
Identities = 455/557 (81%), Positives = 507/557 (90%)
Frame = +2
Query: 1 MLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLIPLSYVAGLLIGR 60
MLVRINTLLQGYSGIRFEI+EAI K LN+NITPCLPLRGTITASGDL+PLSY+AGLL GR
Sbjct: 551 MLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGR 730
Query: 61 PNSKSIGPNGQVLNAQEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVLFDTNLL 120
PNSK++GP+G++LNA+EAF+LA I FFELQPKEGLALVNGTAVGSGLAS+VLF+ N++
Sbjct: 731 PNSKAVGPSGEILNAKEAFELANIGAEFFELQPKEGLALVNGTAVGSGLASIVLFEANII 910
Query: 121 VVLSEILSAIFAEVMLGKPQFTDHLIHKVKLHPGQIEAAAIMEHILDGSYYGKAAQKVHE 180
VLSE++SAIFAEVM GKP+FTDHL HK+K HPGQIEAAAIMEHIL+GS Y KAA+K+HE
Sbjct: 911 AVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYVKAAKKLHE 1090
Query: 181 INPLQKPKQDRYAIRTSPQWLGPQIEVIRYATKMIEREINSVNDNPLIDVSRDKALHGGN 240
I+PLQKPKQDRYA+RTSPQWLGP IEVIR++TK IEREINSVNDNPLIDVSR+KALHGGN
Sbjct: 1091 IDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGN 1270
Query: 241 FQGTPIGVSMDNTRLAIAAIGKLMFAQFTELVNDIYNNGLPSSLTASRNPSLDYGFKGAE 300
FQGTPIGVSMDNTRLA+A+IGKLMFAQF+ELVND YNNGLPS+LTASRNPSLDYGFKGAE
Sbjct: 1271 FQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAE 1450
Query: 301 VAMASYCSELQYLASPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEIWKLMSSTFLVAL 360
+AMASYCSELQYLA+PVT+HVQSAEQHNQDVNSLGLIS+RKT EA+EI KLMSSTFLVAL
Sbjct: 1451 IAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTHEAIEILKLMSSTFLVAL 1630
Query: 361 CQAIDLRHIEENFKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEGEYVFTYI 420
CQAIDLRH+EEN K+ VKN VSQVAKR LT GVNGELHPSRFCEKDLL VV+ EY F YI
Sbjct: 1631 CQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYI 1810
Query: 421 DDPCSPIYPLMQKLRYVLVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVENARV 480
DDPCS YPLMQKLR VLVD+AL NG+ E N+STSIFQKI FEEELK LLPKEVE ARV
Sbjct: 1811 DDPCSGTYPLMQKLRQVLVDYALANGENEKNTSTSIFQKIATFEEELKTLLPKEVEGARV 1990
Query: 481 EIENGNPAVPNMIKECRSYPLYKFMRETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFID 540
EN A+PN IKECRSYPLYKF+RE LGT+LLTGE++ SPGE+CDKVFTA+C G+ ID
Sbjct: 1991 AYENDQCAIPNKIKECRSYPLYKFVREELGTALLTGERVISPGEECDKVFTALCQGKIID 2170
Query: 541 PMLDCLKEWNGVPLPIC 557
P+L+CL EWNG PLPIC
Sbjct: 2171 PLLECLGEWNGAPLPIC 2221
>TC216852 UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 , complete
Length = 2311
Score = 927 bits (2397), Expect = 0.0
Identities = 454/557 (81%), Positives = 509/557 (90%)
Frame = +1
Query: 1 MLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLIPLSYVAGLLIGR 60
MLVRINTLLQGYSGIRFEI+EAI K LN+N+TPCL LRGTITASGDL+PLSY+AGLL GR
Sbjct: 469 MLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLDLRGTITASGDLVPLSYIAGLLTGR 648
Query: 61 PNSKSIGPNGQVLNAQEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVLFDTNLL 120
PNSK++GP+G+VLNA+EAF+LA I + FFELQPKEGLALVNGTAVGSGLAS+VLF+ N+L
Sbjct: 649 PNSKAVGPSGEVLNAKEAFELASINSEFFELQPKEGLALVNGTAVGSGLASMVLFEANIL 828
Query: 121 VVLSEILSAIFAEVMLGKPQFTDHLIHKVKLHPGQIEAAAIMEHILDGSYYGKAAQKVHE 180
VLSE+LSAIFAEVM GKP+FTDHL HK+K HPGQIEAAAIMEHILDGS Y KAA+K+HE
Sbjct: 829 AVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHE 1008
Query: 181 INPLQKPKQDRYAIRTSPQWLGPQIEVIRYATKMIEREINSVNDNPLIDVSRDKALHGGN 240
I+PLQKPKQDRYA+RTSPQWLGP IEVIR++TK IEREINSVNDNPLIDVSR+KALHGGN
Sbjct: 1009 IDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGN 1188
Query: 241 FQGTPIGVSMDNTRLAIAAIGKLMFAQFTELVNDIYNNGLPSSLTASRNPSLDYGFKGAE 300
FQGTPIGVSMDNTRLA+A+IGKLMFAQF+ELVND YNNGLPS+LTASRNPSLDYGFKGAE
Sbjct: 1189 FQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAE 1368
Query: 301 VAMASYCSELQYLASPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEIWKLMSSTFLVAL 360
+AMASYCSELQYLA+PVTTHVQSAEQHNQDVNSLGLIS+RKT EA+EI KLMSSTFL+AL
Sbjct: 1369 IAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIAL 1548
Query: 361 CQAIDLRHIEENFKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEGEYVFTYI 420
CQAIDLRH+EEN K+ VKNTVSQV+KRILT GVNGELHPSRFCEKDLL VV+ EY+F+YI
Sbjct: 1549 CQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYI 1728
Query: 421 DDPCSPIYPLMQKLRYVLVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVENARV 480
DDPCS YPLMQKLR VLVDHAL N + E + ++SIFQKI FEEELK LLPKEVE+AR
Sbjct: 1729 DDPCSATYPLMQKLRQVLVDHALVNAESEKDVNSSIFQKIAIFEEELKNLLPKEVESARA 1908
Query: 481 EIENGNPAVPNMIKECRSYPLYKFMRETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFID 540
E+G A+PN I+ECRSYPLYKF+RE LGT LLTGEK+RSPGE+ DK+FTAMC G+ ID
Sbjct: 1909 AYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIID 2088
Query: 541 PMLDCLKEWNGVPLPIC 557
P+L+CL EWNG PLPIC
Sbjct: 2089 PLLECLGEWNGAPLPIC 2139
>TC225168 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammonia-lyase
class II , partial (64%)
Length = 1627
Score = 758 bits (1956), Expect = 0.0
Identities = 369/453 (81%), Positives = 411/453 (90%)
Frame = +1
Query: 105 VGSGLASLVLFDTNLLVVLSEILSAIFAEVMLGKPQFTDHLIHKVKLHPGQIEAAAIMEH 164
VGSGLAS+VLF+ N++ VLSE++SAIFAEVM GKP+FTDHL HK+K HPGQIEAAAIMEH
Sbjct: 1 VGSGLASIVLFEANIIAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEH 180
Query: 165 ILDGSYYGKAAQKVHEINPLQKPKQDRYAIRTSPQWLGPQIEVIRYATKMIEREINSVND 224
IL+GS Y KAA+K+HEI+PLQKPKQDRYA+RTSPQWLGPQIEVIR++TK IEREINSVND
Sbjct: 181 ILEGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVND 360
Query: 225 NPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFTELVNDIYNNGLPSSL 284
NPLIDVSR+KALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQF+ELVND YNNGLPS+L
Sbjct: 361 NPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNL 540
Query: 285 TASRNPSLDYGFKGAEVAMASYCSELQYLASPVTTHVQSAEQHNQDVNSLGLISARKTAE 344
TASRNPSLDYGFKGAE+AMASYCSELQYLA+PVT+HVQSAEQHNQDVNSLGLIS+RKT E
Sbjct: 541 TASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTHE 720
Query: 345 AVEIWKLMSSTFLVALCQAIDLRHIEENFKSVVKNTVSQVAKRILTVGVNGELHPSRFCE 404
A+EI KLMSSTFL+ALCQAIDLRH+EEN K+ VKN VSQVAKR LT GVNGELHPSRFCE
Sbjct: 721 AIEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCE 900
Query: 405 KDLLNVVEGEYVFTYIDDPCSPIYPLMQKLRYVLVDHALQNGDKEANSSTSIFQKIGAFE 464
KDLL VV+ EY F YIDDPCS YPLMQKLR VLVD+AL NG+ E N++TSIFQKI FE
Sbjct: 901 KDLLKVVDREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNTNTSIFQKIATFE 1080
Query: 465 EELKALLPKEVENARVEIENGNPAVPNMIKECRSYPLYKFMRETLGTSLLTGEKIRSPGE 524
EELK LLPKEVE ARV EN A+PN IKECRSYPLYKF+RE LGT+LLTGE++ SPGE
Sbjct: 1081EELKTLLPKEVEGARVAYENDQCAIPNKIKECRSYPLYKFVREELGTALLTGERVVSPGE 1260
Query: 525 DCDKVFTAMCDGRFIDPMLDCLKEWNGVPLPIC 557
+CDKVFTAMC G+ IDP+L+CL EWNG PLPIC
Sbjct: 1261ECDKVFTAMCQGKIIDPLLECLGEWNGAPLPIC 1359
>TC209668 homologue to UP|PAL2_CICAR (Q9SMK9) Phenylalanine ammonia-lyase 2
, partial (43%)
Length = 940
Score = 551 bits (1419), Expect = e-157
Identities = 268/312 (85%), Positives = 296/312 (93%)
Frame = +3
Query: 208 IRYATKMIEREINSVNDNPLIDVSRDKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQ 267
IR+ATKMIEREINSVNDNPLIDVSR+KALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQ
Sbjct: 3 IRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQ 182
Query: 268 FTELVNDIYNNGLPSSLTASRNPSLDYGFKGAEVAMASYCSELQYLASPVTTHVQSAEQH 327
F+ELVND YNNGLPS+LTASRNPSLDYGFKGAE+AMASYCSELQYLA+PVT HVQSAEQH
Sbjct: 183 FSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQH 362
Query: 328 NQDVNSLGLISARKTAEAVEIWKLMSSTFLVALCQAIDLRHIEENFKSVVKNTVSQVAKR 387
NQDVNSLGL+S+RKTAE ++I KL +STFLVALCQAIDLRH+EEN K+ V+NTVSQVAKR
Sbjct: 363 NQDVNSLGLVSSRKTAEKIDILKLRASTFLVALCQAIDLRHLEENLKNTVRNTVSQVAKR 542
Query: 388 ILTVGVNGELHPSRFCEKDLLNVVEGEYVFTYIDDPCSPIYPLMQKLRYVLVDHALQNGD 447
+LTVG+NGELHPSRFCEKDLL +V+ EYV+ YIDDPCS YPLMQKLR VLVDHALQNGD
Sbjct: 543 VLTVGINGELHPSRFCEKDLLKIVDREYVYAYIDDPCSATYPLMQKLRLVLVDHALQNGD 722
Query: 448 KEANSSTSIFQKIGAFEEELKALLPKEVENARVEIENGNPAVPNMIKECRSYPLYKFMRE 507
KEA+SSTSIFQKIGAFEEEL ALLPKEVE+AR+E+ENGNPA+PN IKECRSYPLYKF+RE
Sbjct: 723 KEASSSTSIFQKIGAFEEELNALLPKEVESARIEVENGNPAIPNRIKECRSYPLYKFVRE 902
Query: 508 TLGTSLLTGEKI 519
LGT+LLTGEK+
Sbjct: 903 NLGTTLLTGEKV 938
>TC216855 homologue to PRF|1807329B.0|228615|1807329B Phe ammonia lyase.
{Phaseolus vulgaris;} , partial (27%)
Length = 581
Score = 267 bits (683), Expect(2) = 6e-83
Identities = 132/157 (84%), Positives = 149/157 (94%)
Frame = +3
Query: 233 DKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFTELVNDIYNNGLPSSLTASRNPSL 292
+KAL+GGNFQGTPIGVSMDN RLA+A+IGKL+FAQFTELVND+YNNGLPS+L+A RNPSL
Sbjct: 102 NKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSL 281
Query: 293 DYGFKGAEVAMASYCSELQYLASPVTTHVQSAEQHNQDVNSLGLISARKTAEAVEIWKLM 352
DYGFK +EVAMA+YCSELQYLA+PVT+HVQSAEQHNQDVNSLGLISA KT EAVEI KLM
Sbjct: 282 DYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAVEILKLM 461
Query: 353 SSTFLVALCQAIDLRHIEENFKSVVKNTVSQVAKRIL 389
SST+LVALCQAIDLRH+EENFKS VKNTVS+VA++ L
Sbjct: 462 SSTYLVALCQAIDLRHLEENFKSTVKNTVSRVAQKTL 572
Score = 59.3 bits (142), Expect(2) = 6e-83
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +2
Query: 202 GPQIEVIRYATKMIEREINSVNDNPLIDVSR 232
GPQIE+IRY+TK IEREINSVNDNPLIDV+R
Sbjct: 8 GPQIEIIRYSTKSIEREINSVNDNPLIDVTR 100
>TC225165 homologue to UP|PAL2_PHAVU (P19142) Phenylalanine ammonia-lyase
class II , partial (46%)
Length = 1221
Score = 295 bits (756), Expect = 3e-80
Identities = 140/190 (73%), Positives = 157/190 (81%)
Frame = +1
Query: 368 HIEENFKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEGEYVFTYIDDPCSPI 427
+ EN K+ VKN VSQVAKR LT GVNGELHPSRFCEKDLL VV+ EY F YIDDPCS
Sbjct: 532 YASENXKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYIDDPCSGT 711
Query: 428 YPLMQKLRYVLVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVENARVEIENGNP 487
YPLMQKLR VLVD+AL NG+ E N++TSIFQKI FEEELK LLPKEVE ARV EN
Sbjct: 712 YPLMQKLRQVLVDYALANGENEKNTNTSIFQKIATFEEELKTLLPKEVEGARVAYENDQC 891
Query: 488 AVPNMIKECRSYPLYKFMRETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFIDPMLDCLK 547
A+PN IKECRSYPLYKF+RE LGT+LLTGE++ SPGE+CDKVFTA+C G+ IDP+L+CL
Sbjct: 892 AIPNKIKECRSYPLYKFVREELGTALLTGERVISPGEECDKVFTALCQGKIIDPLLECLG 1071
Query: 548 EWNGVPLPIC 557
EWNG PLPIC
Sbjct: 1072EWNGAPLPIC 1101
>AW348884 similar to PIR|JQ1070|JQ1 phenylalanine ammonia-lyase (EC 4.3.1.5)
- soybean (fragment), partial (29%)
Length = 455
Score = 167 bits (424), Expect = 9e-42
Identities = 79/123 (64%), Positives = 94/123 (76%)
Frame = -2
Query: 435 RYVLVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVENARVEIENGNPAVPNMIK 494
R VLV++AL + N++TSIFQKI FEE L L KEVE ARV EN A+PN IK
Sbjct: 454 RQVLVNYALAXXEXXKNTNTSIFQKIATFEE*LXTLXXKEVEGARVAYENDQCAIPNKIK 275
Query: 495 ECRSYPLYKFMRETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFIDPMLDCLKEWNGVPL 554
ECRSYPLYKF+RE LGT+LLTGE++ SPGE+CDKVFT MC G+ IDP+L+CL +WNG PL
Sbjct: 274 ECRSYPLYKFVREELGTALLTGERVVSPGEECDKVFTVMCQGKIIDPLLECLGDWNGAPL 95
Query: 555 PIC 557
P C
Sbjct: 94 PTC 86
>TC216854 homologue to UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1
, partial (15%)
Length = 512
Score = 161 bits (408), Expect = 6e-40
Identities = 76/110 (69%), Positives = 90/110 (81%)
Frame = +2
Query: 447 DKEANSSTSIFQKIGAFEEELKALLPKEVENARVEIENGNPAVPNMIKECRSYPLYKFMR 506
+K+ NSS IFQKI FEEELK LLPKEVE+AR E+G A+PN I+ECR YPLYKF+R
Sbjct: 2 EKDVNSS--IFQKIAIFEEELKNLLPKEVESARAAYESGKAAIPNKIQECRFYPLYKFVR 175
Query: 507 ETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFIDPMLDCLKEWNGVPLPI 556
E LGT LLTGEK+RSPGE+ DK+FTAMC G+ IDP+++CL EWNG PLPI
Sbjct: 176 EELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGAPLPI 325
>AW351185 homologue to PIR|JQ1070|JQ10 phenylalanine ammonia-lyase (EC
4.3.1.5) - soybean (fragment), partial (23%)
Length = 448
Score = 159 bits (402), Expect = 3e-39
Identities = 76/100 (76%), Positives = 84/100 (84%)
Frame = -2
Query: 361 CQAIDLRHIEENFKSVVKNTVSQVAKRILTVGVNGELHPSRFCEKDLLNVVEGEYVFTYI 420
CQAIDLRH+EEN K+ VKN VSQVAKR LT GVNGELHPSRFCEKDLL VV+ EY F YI
Sbjct: 447 CQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYI 268
Query: 421 DDPCSPIYPLMQKLRYVLVDHALQNGDKEANSSTSIFQKI 460
DDPCS YPLMQKLR VLVD+AL NG+ E N++TSIFQ +
Sbjct: 267 DDPCSGTYPLMQKLRQVLVDYALANGENEKNTNTSIFQYV 148
>AW351172 similar to SP|P19143|PAL3 Phenylalanine ammonia-lyase class III (EC
4.3.1.5). [Kidney bean French bean] {Phaseolus
vulgaris}, partial (17%)
Length = 508
Score = 157 bits (398), Expect = 9e-39
Identities = 75/122 (61%), Positives = 93/122 (75%)
Frame = -3
Query: 435 RYVLVDHALQNGDKEANSSTSIFQKIGAFEEELKALLPKEVENARVEIENGNPAVPNMIK 494
+ VL + A + + N S IF+KIGAFE+ELK+LLPKEVENARV ENGNPA+PN IK
Sbjct: 506 KQVLYEKAHISAINDKNVSLLIFEKIGAFEDELKSLLPKEVENARVAYENGNPAIPNRIK 327
Query: 495 ECRSYPLYKFMRETLGTSLLTGEKIRSPGEDCDKVFTAMCDGRFIDPMLDCLKEWNGVPL 554
ECRSYPLYKF+RE L LLTGEK SP E+ +KV+TAMC + +DP+L+CL +W G P+
Sbjct: 326 ECRSYPLYKFVREELEIGLLTGEKNLSPDEEFEKVYTAMCQAKIVDPILECLGDWKGSPI 147
Query: 555 PI 556
PI
Sbjct: 146 PI 141
>AW757191 similar to SP|P19142|PAL2 Phenylalanine ammonia-lyase class II (EC
4.3.1.5). [Kidney bean French bean] {Phaseolus
vulgaris}, partial (19%)
Length = 430
Score = 155 bits (391), Expect = 6e-38
Identities = 77/114 (67%), Positives = 93/114 (81%)
Frame = +2
Query: 1 MLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLIPLSYVAGLLIGR 60
ML+RIN LLQ YSGIRFEI+EAI K LN+NI PC+PLRGTIT+SGDL+PLSY+AGLL G
Sbjct: 89 MLLRINKLLQCYSGIRFEILEAITKLLNNNIAPCMPLRGTITSSGDLVPLSYIAGLLTG* 268
Query: 61 PNSKSIGPNGQVLNAQEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLASLVL 114
PNSK++GP+G +L A AF+L I F LQPKEGL LVNGT++GSG S+V+
Sbjct: 269 PNSKAVGPSGDILYAI*AFELTNIGAEFCVLQPKEGLVLVNGTSIGSG*YSIVI 430
>AW459068 similar to SP|Q43052|PAL2_ Phenylalanine ammonia-lyase G2B (EC
4.3.1.5). [Aspen] {Populus kitakamiensis}, partial (6%)
Length = 391
Score = 90.5 bits (223), Expect = 2e-18
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = -3
Query: 509 LGTSLLTGEKIRSPGEDCDKVFTAMCDGRFIDPMLDCLKEWNGVPLPIC 557
LGT+LLTGEK++SPGE+ DKVFTA+C+G+ IDP+LDCLKEW G PLPIC
Sbjct: 386 LGTTLLTGEKVKSPGEEFDKVFTALCEGKLIDPLLDCLKEWKGAPLPIC 240
>AI938628 similar to SP|P19142|PAL2_ Phenylalanine ammonia-lyase class II (EC
4.3.1.5). [Kidney bean French bean] {Phaseolus
vulgaris}, partial (9%)
Length = 208
Score = 87.4 bits (215), Expect = 1e-17
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +2
Query: 97 LALVNGTAVGSGLASLVLFDTNLLVVLSEILSAIFAEVMLGKPQFTDHLIHKVKLHPGQI 156
LALVNGTA GSGLAS+ LF+ N++ LSE +S IFAE+M G+P+ TDHL H +K HPGQ
Sbjct: 2 LALVNGTAGGSGLASIGLFEANIIAGLSEGISTIFAEMMQGEPEVTDHLNH*LKHHPGQN 181
Query: 157 EAAAIMEHI 165
A AIMEHI
Sbjct: 182 GACAIMEHI 208
>TC216853 UP|PAL1_SOYBN (P27991) Phenylalanine ammonia-lyase 1 , partial
(5%)
Length = 278
Score = 62.8 bits (151), Expect = 4e-10
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +3
Query: 522 PGEDCDKVFTAMCDGRFIDPMLDCLKEWNGVPLPI 556
PGE+ DK+FTAMC G+ IDP+++CL EWNG PLPI
Sbjct: 3 PGEEFDKLFTAMCQGKIIDPLMECLGEWNGAPLPI 107
>BE441027
Length = 472
Score = 31.2 bits (69), Expect = 1.3
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = -1
Query: 310 LQYLASPVTTHVQSAEQHNQDVNSLGLISA 339
L YL SPVTT A HNQ+V + L SA
Sbjct: 151 LSYLKSPVTTRALHALDHNQEVKVIVLSSA 62
>TC227986 weakly similar to UP|Q75K31 (Q75K31) Expressed protein, partial
(8%)
Length = 825
Score = 31.2 bits (69), Expect = 1.3
Identities = 38/128 (29%), Positives = 49/128 (37%), Gaps = 6/128 (4%)
Frame = +2
Query: 82 AGIETGFFELQPKEGLALVNGTAVGSGLA----SLVLFDTNLLVVLSEILSAIFAEVMLG 137
AG TGF G A++ VG A S V + NL V + A +E+ L
Sbjct: 44 AGSRTGFGNFANPTGYAMITPGVVGGATALEDSSRVKYKDNLYVPNPQ---AETSEIWLQ 214
Query: 138 KPQFTDHLIHKVKLH-PGQIEAAAIM-EHILDGSYYGKAAQKVHEINPLQKPKQDRYAIR 195
P+ + + PGQ AA M H S+ AAQ H P + A
Sbjct: 215 NPRDLPGMQSTPYYNMPGQTPHAAYMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQPAAM 394
Query: 196 TSPQWLGP 203
SP LGP
Sbjct: 395 ASPHHLGP 418
>NP004776 cytochrome P450 H2O2-dependent urate-degrading peroxidase
Length = 1536
Score = 30.4 bits (67), Expect = 2.2
Identities = 23/67 (34%), Positives = 33/67 (48%), Gaps = 1/67 (1%)
Frame = -1
Query: 265 FAQFTELVNDIYNNGLP-SSLTASRNPSLDYGFKGAEVAMASYCSELQYLASPVTTHVQS 323
F ELV D+ N L S+L + P EV+ A + +L+ LAS V+ H+
Sbjct: 735 FNDRVELVQDVINPLLILSNLEILQRPD--------EVSEAVFAEDLKNLASDVSDHLSL 580
Query: 324 AEQHNQD 330
AE H+ D
Sbjct: 579 AEHHHGD 559
>TC211696 homologue to UP|Q9ARC5 (Q9ARC5) Membrane transporter, complete
Length = 1899
Score = 29.6 bits (65), Expect = 3.7
Identities = 24/87 (27%), Positives = 35/87 (39%), Gaps = 5/87 (5%)
Frame = +2
Query: 37 LRGTITASGDLIPLSYVAGLLIGRPNSKSIGPNGQVLNAQEAFQLAGIETGFFELQPKEG 96
+RG + L L V + +GR NS I +L + A G G +
Sbjct: 1121 MRGRLWTLWILQTLGGVFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRS 1300
Query: 97 LALVNGTA-----VGSGLASLVLFDTN 118
L +++G GSGL LV F T+
Sbjct: 1301 LGIISGLTGAGGNFGSGLTQLVFFSTS 1381
>BE021410 similar to GP|28395459|gb ubiquitin/ribosomal fusion protein {Malus
x domestica}, partial (83%)
Length = 394
Score = 28.9 bits (63), Expect = 6.3
Identities = 22/63 (34%), Positives = 31/63 (48%)
Frame = -1
Query: 102 GTAVGSGLASLVLFDTNLLVVLSEILSAIFAEVMLGKPQFTDHLIHKVKLHPGQIEAAAI 161
G+A+G G D + +V L E+ +A ++L DHL H V +HP I AA
Sbjct: 382 GSALGVGALLEEPLDLSRIVDLVELKNAKLDLLVLE----LDHLGHGVGIHPAIIGAAKK 215
Query: 162 MEH 164
EH
Sbjct: 214 AEH 206
>BU577761
Length = 424
Score = 28.5 bits (62), Expect = 8.2
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 290 PSLDYGFKGAEVAMASYCSELQYLASPVTTHVQSAEQHNQD-VNSLGLISARKTAEAVEI 348
P+L++GF E + Y ++Q L V S++ + Q +N L LIS+ EAV +
Sbjct: 197 PTLNFGF*RIE*ILDGY*YKIQRLIERKKIWVSSSKNNIQC*IN*L*LISS*LLTEAVPL 376
Query: 349 WKLMSSTF 356
L+SS F
Sbjct: 377 SSLLSSLF 400
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,410,851
Number of Sequences: 63676
Number of extensions: 264612
Number of successful extensions: 1232
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of query: 557
length of database: 12,639,632
effective HSP length: 102
effective length of query: 455
effective length of database: 6,144,680
effective search space: 2795829400
effective search space used: 2795829400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC133709.13