BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130803.10 - phase: 0
(289 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206883 similar to GB|AAS10003.1|41619012|AY519533 MYB transcri... 104 5e-23
TC219488 UP|Q8S900 (Q8S900) Syringolide-induced protein 1-3-1A, ... 100 1e-21
TC232531 UP|Q8S8Z9 (Q8S8Z9) Syringolide-induced protein 1-3-1B, ... 99 3e-21
TC228909 similar to GB|AAS09999.1|41618996|AY519529 MYB transcri... 97 1e-20
TC206464 similar to GB|AAS58519.1|45357120|AY550308 MYB transcri... 96 1e-20
TC225124 homologue to UP|Q8S9H7 (Q8S9H7) MYB-like transcription ... 96 1e-20
CA784006 94 9e-20
TC230515 similar to GB|AAS09999.1|41618996|AY519529 MYB transcri... 91 5e-19
TC227468 similar to UP|Q8H1D0 (Q8H1D0) Transcription factor MYBS... 90 1e-18
TC219358 homologue to PIR|F96527|F96527 protein F27J15.20 [impor... 89 2e-18
AW756524 89 3e-18
BI424203 89 3e-18
AW706232 89 3e-18
TC225122 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1... 88 4e-18
TC228766 similar to GB|AAS99672.1|46518381|BT012528 At5g56840 {A... 85 3e-17
TC214989 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1... 85 3e-17
TC219392 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1... 84 6e-17
TC214358 homologue to UP|Q84UB0 (Q84UB0) Transcription factor My... 84 7e-17
TC214990 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1... 83 1e-16
TC215913 similar to GB|AAS09986.1|41618940|AY519516 MYB transcri... 82 2e-16
>TC206883 similar to GB|AAS10003.1|41619012|AY519533 MYB transcription factor
{Arabidopsis thaliana;} , partial (51%)
Length = 1224
Score = 104 bits (259), Expect = 5e-23
Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = +3
Query: 89 SVPEESHAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFI 147
SV H +KG WTE+EHKLFL GLKK+GKG W++IS+ FV+T+TPTQ+ASHAQKYFI
Sbjct: 261 SVRPIEHERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFI 440
Query: 148 HQNVKDIEKKEKKRKSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQT 205
Q K+K+R SIHD TT+N +T+ T E + S + S PQ T T
Sbjct: 441 RQLSGG---KDKRRASIHDITTVNLTETITTSCSEDTNRSTSPHVLS--QPQQQNSTPT 602
>TC219488 UP|Q8S900 (Q8S900) Syringolide-induced protein 1-3-1A, complete
Length = 1338
Score = 100 bits (248), Expect = 1e-21
Identities = 63/154 (40%), Positives = 86/154 (54%), Gaps = 3/154 (1%)
Frame = +2
Query: 63 AVAILNSNDNSVETLNSNENNLIQAESVPEESHAPRKGH--WTEDEHKLFLKGLKKHGKG 120
+VA+ S + T + N N + + ++ RK WTE+EH+LFL GL K GKG
Sbjct: 455 SVAMPPSGGAGISTWD-NANQISFGSKLKQQGENERKKGTPWTEEEHRLFLIGLSKFGKG 631
Query: 121 CWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHD-TTLNKNDTLVTVA 179
W+ IS+ VVT+TPTQ+ASHAQKYF+ QN KKE+KR SIHD TT++ N + +
Sbjct: 632 DWRSISRNVVVTRTPTQVASHAQKYFLRQN---SVKKERKRSSIHDITTVDSNSAPMPID 802
Query: 180 VEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPM 213
Q+ +PP G Q+QQ S M
Sbjct: 803 ------------QTWVPPPGGSPQQSQQYPSSNM 868
>TC232531 UP|Q8S8Z9 (Q8S8Z9) Syringolide-induced protein 1-3-1B, partial
(98%)
Length = 1225
Score = 98.6 bits (244), Expect = 3e-21
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = +2
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+LFL GL K GKG W+ IS+ VVT+TPTQ+ASHAQKYF+ QN KKE+KR
Sbjct: 557 WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN---SVKKERKR 727
Query: 162 KSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPML 214
SIHD TT++ N V + Q+ +PP G Q+ Q S ML
Sbjct: 728 SSIHDITTVDSNSVPVPID------------QNWVPPPGGSVQQSLQYPSSNML 853
>TC228909 similar to GB|AAS09999.1|41618996|AY519529 MYB transcription factor
{Arabidopsis thaliana;} , partial (60%)
Length = 1612
Score = 96.7 bits (239), Expect = 1e-20
Identities = 53/121 (43%), Positives = 72/121 (58%), Gaps = 2/121 (1%)
Frame = +1
Query: 87 AESVPEESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 146
A + P E + WT++EH+ FL GLKK+GKG W++IS+ FV+T+TPTQ+ASHAQKYF
Sbjct: 838 ASTRPSEQERKKGVPWTKEEHRQFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF 1017
Query: 147 IHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVE--QRDEIPSVELQSVIPPQGMQQTQ 204
I Q K+KKR SIHD T+ + + E R P ++ V PP Q+
Sbjct: 1018IRQLSGG---KDKKRSSIHDITMVNLPEAKSPSSESNNRPYSPDHSVKDVNPPSQNQRLS 1188
Query: 205 T 205
T
Sbjct: 1189T 1191
>TC206464 similar to GB|AAS58519.1|45357120|AY550308 MYB transcription factor
{Arabidopsis thaliana;} , partial (61%)
Length = 1156
Score = 96.3 bits (238), Expect = 1e-20
Identities = 47/74 (63%), Positives = 58/74 (77%), Gaps = 1/74 (1%)
Frame = +3
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTEDEH+ FL GL K+GKG W++IS+ FVVTKTPTQ+ASHAQKY+I Q V K+K+R
Sbjct: 900 WTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSG--GKDKRR 1073
Query: 162 KSIHD-TTLNKNDT 174
SIHD TT+N +T
Sbjct: 1074PSIHDITTVNLTET 1115
>TC225124 homologue to UP|Q8S9H7 (Q8S9H7) MYB-like transcription factor
DIVARICATA, partial (27%)
Length = 483
Score = 96.3 bits (238), Expect = 1e-20
Identities = 60/136 (44%), Positives = 79/136 (57%), Gaps = 5/136 (3%)
Frame = +2
Query: 91 PEESHAPRKG----HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 146
P E RKG H E+EHKLFL GLKK+GKG W++IS+ +V+T+TPTQ+ASHAQKYF
Sbjct: 62 PLEDPLSRKGRKVCHGXEEEHKLFLLGLKKYGKGDWRNISRNYVITRTPTQVASHAQKYF 241
Query: 147 IHQNVKDIEKKEKKRKSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQT 205
I Q K+K+R SIHD TT+N +T T + E + +S P ++
Sbjct: 242 IRQLSGG---KDKRRASIHDITTVNLTETTRTSSDESK--------RSASPQNSAMLSRH 388
Query: 206 QQNEISPMLCLLPISS 221
QQ S + P SS
Sbjct: 389 QQLNSSTSVRTSPTSS 436
>CA784006
Length = 409
Score = 93.6 bits (231), Expect = 9e-20
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +3
Query: 87 AESVPEESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYF 146
A + P E + WTE+EH+ FL GLKK+GKG W++IS+ FV T+TPTQ+ASHAQKYF
Sbjct: 66 ASTRPTEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYF 245
Query: 147 IHQNVKDIEKKEKKRKSIHDTTL 169
I Q K+K+R SIHD T+
Sbjct: 246 IRQLTGG---KDKRRSSIHDITM 305
>TC230515 similar to GB|AAS09999.1|41618996|AY519529 MYB transcription factor
{Arabidopsis thaliana;} , partial (50%)
Length = 946
Score = 91.3 bits (225), Expect = 5e-19
Identities = 42/68 (61%), Positives = 53/68 (77%)
Frame = +1
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+ FL GL K+GKG W++IS+ FVVTKTPTQ+ASHAQKY+I Q + K K+R
Sbjct: 463 WTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKLSG-GKDNKRR 639
Query: 162 KSIHDTTL 169
SIHD T+
Sbjct: 640 PSIHDITI 663
>TC227468 similar to UP|Q8H1D0 (Q8H1D0) Transcription factor MYBS3, partial
(56%)
Length = 1404
Score = 90.1 bits (222), Expect = 1e-18
Identities = 67/243 (27%), Positives = 113/243 (45%), Gaps = 7/243 (2%)
Frame = +3
Query: 11 IFGIESMEGRKSIQSSLLQIDLNESASAQDPSEHSMEQQQEKTGTNIDESGHAVAILNSN 70
+FG+ +G I+ S +LN S+S+ + ++ + + +N+ + S+
Sbjct: 135 LFGVRLTDG-SIIKKSASMGNLNLSSSSSSAAAAHLQFRSSPSSSNLPAA--------SS 287
Query: 71 DNSVETLNSNENNLIQAESVPEESHAPRKGH------WTEDEHKLFLKGLKKHGKGCWKD 124
N + + + + A R+G WTE+EH+LFL GL+K GKG W+
Sbjct: 288 PNPSSPCSDPPQGYLSDDPAHVSTFANRRGDRKKGVPWTEEEHRLFLIGLQKLGKGDWRG 467
Query: 125 ISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRD 184
I++ FVV++TPTQ+ASHAQKYFI Q+ H T + +L + +
Sbjct: 468 IARNFVVSRTPTQVASHAQKYFIRQS--------------HATRRKRRSSLFDMVPDMSS 605
Query: 185 EIPSV-ELQSVIPPQGMQQTQTQQNEISPMLCLLPISSTIPSVQQQNELTPVVTAPMEQQ 243
+ PSV E Q ++PP Q +Q + P L ++ ++E P+ T E
Sbjct: 606 DQPSVPEEQVLLPPS--QNSQPCNGKSQPSL----------NLSLKSEFEPMETTSQENA 749
Query: 244 HET 246
+T
Sbjct: 750 QQT 758
>TC219358 homologue to PIR|F96527|F96527 protein F27J15.20 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(39%)
Length = 1195
Score = 89.4 bits (220), Expect = 2e-18
Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +3
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTE+EH+LFL GL K GKG W+ IS+ FV+++TPTQ+ASHAQKYFI N +
Sbjct: 420 RKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN--- 590
Query: 157 KEKKRKSIHD-TTLNKND 173
++++R SIHD T++N D
Sbjct: 591 RDRRRSSIHDITSVNNGD 644
>AW756524
Length = 256
Score = 88.6 bits (218), Expect = 3e-18
Identities = 42/67 (62%), Positives = 51/67 (75%)
Frame = +2
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTEDEH+L L GL+K+GKG W+ IS+ FVVT TPTQ+ASHAQKYFI N + K++ R
Sbjct: 56 WTEDEHRLLLLGLEKYGKGDWRSISRNFVVT*TPTQVASHAQKYFIRLNSMN---KDRMR 226
Query: 162 KSIHDTT 168
SIHD T
Sbjct: 227 SSIHDVT 247
>BI424203
Length = 411
Score = 88.6 bits (218), Expect = 3e-18
Identities = 45/72 (62%), Positives = 55/72 (75%), Gaps = 1/72 (1%)
Frame = +3
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTEDEH+LFL GL K+GKG + IS+ FVVT+TPTQ+ASHAQKYFI N +
Sbjct: 60 RKGIAWTEDEHRLFLLGLDKYGKGDRRSISRNFVVTRTPTQVASHAQKYFIRLNSMN--- 230
Query: 157 KEKKRKSIHDTT 168
K+++R SIHD T
Sbjct: 231 KDRRRSSIHDIT 266
>AW706232
Length = 385
Score = 88.6 bits (218), Expect = 3e-18
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +1
Query: 107 HKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHD 166
HKLFL GLKK+GKG W++IS+ FV+T+TPTQ+ASHAQKYFI Q K+K+R SIHD
Sbjct: 7 HKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSXG---KDKRRASIHD 177
Query: 167 -TTLNKNDTLVT 177
TT+N +T+ T
Sbjct: 178 ITTVNLTETITT 213
>TC225122 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1, partial
(40%)
Length = 1301
Score = 88.2 bits (217), Expect = 4e-18
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Frame = +1
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHKLFL GL+K GKG W+ IS+ +V T+TPTQ+ASHAQKYF+ + + + ++R
Sbjct: 313 WTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRTNLN---RRRRR 483
Query: 162 KSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLCLLP--I 219
S+ D T D++ T +E+ +I + S+ P + P + + P +
Sbjct: 484 SSLFDIT---TDSVSTTPMEEGVQIQHQDNVSLFHPVYPVTPEGSNMNGFPKMSMYPKDV 654
Query: 220 SSTIPSVQQQNELTPVVTAPMEQQHETPAILNNKDNENLQTQLVLLYPI-----GSTLPD 274
S + SVQ N P+ T + Q N + T+LV PI GST+ D
Sbjct: 655 GSGVMSVQAGN---PMETLTLGQ--------GNVEQNGPSTKLVCTTPIVPDHRGSTVSD 801
Query: 275 M 275
+
Sbjct: 802 I 804
>TC228766 similar to GB|AAS99672.1|46518381|BT012528 At5g56840 {Arabidopsis
thaliana;} , partial (54%)
Length = 1220
Score = 85.1 bits (209), Expect = 3e-17
Identities = 41/84 (48%), Positives = 56/84 (65%)
Frame = +3
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH++FL GL+K GKG W+ IS+ FV T+TPTQ+ASHAQKYF+ D K+K+R
Sbjct: 411 WTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATMD---KKKRR 581
Query: 162 KSIHDTTLNKNDTLVTVAVEQRDE 185
S+ D + +V+ Q DE
Sbjct: 582 SSLFDLVGSNKAGSNSVSAHQNDE 653
>TC214989 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1, partial
(42%)
Length = 1511
Score = 85.1 bits (209), Expect = 3e-17
Identities = 57/172 (33%), Positives = 93/172 (53%), Gaps = 5/172 (2%)
Frame = +3
Query: 32 LNESASAQDPSEHSMEQQQEKTGTNIDESGHAVAILNSNDNSVETLNSNENNLIQAESVP 91
+ +S S + S++ E + T TN ++ A +++D + + NS +
Sbjct: 189 MRKSVSMNNLSQY--EHPLDATTTNNNKDAVAAGYASADDAAPQ--NSGRHR-------- 332
Query: 92 EESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNV 151
E R WTE+EHKLFL GL+K GKG W+ ISK +V T+TPTQ+ASHAQKYF+ ++
Sbjct: 333 -ERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSN 509
Query: 152 KDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQ-----RDEIPSVELQSVIPPQ 198
+ + ++R S+ D T DT+ + +E+ +D + + Q V P +
Sbjct: 510 LN---RRRRRSSLFDIT---TDTVSAIPMEEEQVQNQDTLCHSQQQPVFPAE 647
>TC219392 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1, partial
(28%)
Length = 918
Score = 84.3 bits (207), Expect = 6e-17
Identities = 56/176 (31%), Positives = 88/176 (49%), Gaps = 23/176 (13%)
Frame = +3
Query: 78 NSNENNLIQAESVPEESHAPRKGH--------------------WTEDEHKLFLKGLKKH 117
+++ NL Q ES P H P G+ WTE+EH+LFL GL+
Sbjct: 267 SASMTNLSQYESPPP--HDPNAGYASDDVVHPSRHTRERKRGVPWTEEEHRLFLLGLQNI 440
Query: 118 GKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVT 177
GKG W+ IS+ FV T+TPTQ+ASHAQKYF+ ++ + + ++R S+ D T D+++
Sbjct: 441 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHT---QNRRRRRSSLFDIT---TDSVME 602
Query: 178 VAVEQRDE---IPSVELQSVIPPQGMQQTQTQQNEISPMLCLLPISSTIPSVQQQN 230
E+ +E +PS + V+P + + LP+S P + +N
Sbjct: 603 PWPEKEEEQVVLPSARSKPVLPVPPSSKMAELDLSGKSLSLKLPVSK--PPISNEN 764
>TC214358 homologue to UP|Q84UB0 (Q84UB0) Transcription factor Myb1, partial
(24%)
Length = 940
Score = 84.0 bits (206), Expect = 7e-17
Identities = 41/96 (42%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +2
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+LFL GL K GKG W+ IS+ FV T+TPTQ+ASHAQKYF+ ++ + + ++R
Sbjct: 11 WTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRH---NQNRRRRR 181
Query: 162 KSIHDTTLNKNDTLV-TVAVEQRDEIPSVELQSVIP 196
S+ D T DT++ + + + +++P + + IP
Sbjct: 182 SSLFDIT---TDTVMESSTIMEEEQVPQETMAAPIP 280
>TC214990 similar to UP|Q84UB0 (Q84UB0) Transcription factor Myb1, partial
(59%)
Length = 1443
Score = 83.2 bits (204), Expect = 1e-16
Identities = 48/127 (37%), Positives = 71/127 (55%)
Frame = +3
Query: 55 TNIDESGHAVAILNSNDNSVETLNSNENNLIQAESVPEESHAPRKGHWTEDEHKLFLKGL 114
+N+ + H N+ D S ++ Q E R WTE+EHKLFL GL
Sbjct: 225 SNLSQYEHPQDGSNNKDALAAGYASADDAAPQNSGRLRERERKRGVPWTEEEHKLFLVGL 404
Query: 115 KKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDT 174
+K GKG W+ ISK +V T+TPTQ+ASHAQKYF+ ++ + + ++R S+ D T DT
Sbjct: 405 QKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLN---RRRRRSSLFDIT---TDT 566
Query: 175 LVTVAVE 181
+ + +E
Sbjct: 567 VSAIPME 587
>TC215913 similar to GB|AAS09986.1|41618940|AY519516 MYB transcription factor
{Arabidopsis thaliana;} , partial (66%)
Length = 1545
Score = 82.4 bits (202), Expect = 2e-16
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Frame = +2
Query: 6 NSYSC------IFGIESMEGRKSIQSSLLQIDLNESASAQDPSEHSMEQQQEKTGTNIDE 59
NS +C +FG+ +G SI+ S +L A + H G D
Sbjct: 248 NSRTCPNRGVKLFGVRLTDG--SIRKSASMGNLTHYAGSGSAPLHVGLNNPGSPGETPD- 418
Query: 60 SGHAVAILNSNDNSVETLNSNENNLIQAESVPEESHAPRKGHWTEDEHKLFLKGLKKHGK 119
HA A + + S+ ++ + + VP WTE+EH++FL GL+K GK
Sbjct: 419 --HAAAAADGYASEDFVPGSSSSSRERKKGVP----------WTEEEHRMFLLGLQKLGK 562
Query: 120 GCWKDISKEFVVTKTPTQIASHAQKYFIHQ-NVKDIEKKEKKRKSIHDTTLNKNDTLVTV 178
G W+ I++ +V+++TPTQ+ASHAQKYFI Q NV + K+R S+ D D
Sbjct: 563 GDWRGIARNYVISRTPTQVASHAQKYFIRQSNV----SRRKRRSSLFDIVA---DEAADT 721
Query: 179 AVEQRDEIPSVEL 191
A+ Q+D + + EL
Sbjct: 722 AMVQQDFLSANEL 760
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.309 0.126 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,223,576
Number of Sequences: 63676
Number of extensions: 138410
Number of successful extensions: 874
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of query: 289
length of database: 12,639,632
effective HSP length: 96
effective length of query: 193
effective length of database: 6,526,736
effective search space: 1259660048
effective search space used: 1259660048
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC130803.10