TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC123572.11 + phase: 0 
         (475 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209939 similar to UP|Q9LU81 (Q9LU81) Arabidopsis thaliana geno...   318  3e-87
BI497846                                                              159  3e-39
TC220725 weakly similar to PIR|D88560|D88560 protein F58A4.1 [im...    34  0.16
TC204249 UP|Q9SB11 (Q9SB11) Glycinin, complete                         30  1.8
TC206195 similar to UP|Q8GZT8 (Q8GZT8) PTEN-like protein, partia...    30  2.4
CA852155 similar to GP|15391731|em nitrite transporter {Cucumis ...    30  3.1
TC228825 weakly similar to UP|Q9V5S5 (Q9V5S5) CG33473-PB (Transc...    29  4.0
TC213878 homologue to UP|Q8SCS3 (Q8SCS3) PHIKZ239, partial (9%)        29  4.0
TC206831 similar to UP|Q96400 (Q96400) Nitrite transporter, part...    29  5.2
TC223303 similar to UP|Q8RV26 (Q8RV26) Oligopeptide transporter-...    29  5.2
TC207129 homologue to UP|Q84XV9 (Q84XV9) Phosphoribosylformylgly...    29  5.2
AI442623                                                               29  5.2
TC222287                                                               28  6.8
TC230924 UP|ATPH_LOTJA (P12231) ATP synthase C chain  (Lipid-bin...    28  6.8
TC222233 similar to UP|Q6IMT1 (Q6IMT1) SAB, partial (7%)               28  6.8
TC225943 similar to UP|NU4C_LOTJA (Q9BBP3) NAD(P)H-quinone oxido...    28  6.8
TC209182 similar to PIR|T51854|T51854 RING-H2 finger protein RHF...    28  6.8
BU083551 homologue to GP|7301548|gb|A CG6066-PA {Drosophila mela...    28  8.9

>TC209939 similar to UP|Q9LU81 (Q9LU81) Arabidopsis thaliana genomic DNA,
           chromosome 3, P1 clone: MPE11, partial (49%)
          Length = 871

 Score =  318 bits (816), Expect = 3e-87
 Identities = 150/179 (83%), Positives = 167/179 (92%)
 Frame = +1

Query: 295 SEPISRVDPNEPLDKLLLNKKFRQSFMGFADSCLAGESVHFFDEVHELSKISEHDCVRRI 354
           SEPISR+DPNEPLDKLLLNK+FRQSFM FADSCLAGESVHFFDEV+ELSKI E DCV+RI
Sbjct: 1   SEPISRIDPNEPLDKLLLNKRFRQSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVKRI 180

Query: 355 YMARHIIEKYMVAGAAMEINISHRSKQEILSTSDLARADLFHNALNEIVHLMKTNLAKDY 414
           YMARHIIEKY+VAGAAME+NISHRS+QEILSTS+L R DLFHNALNEI+ LM+TNLA+DY
Sbjct: 181 YMARHIIEKYIVAGAAMEVNISHRSRQEILSTSNLTRPDLFHNALNEIIQLMRTNLARDY 360

Query: 415 WSSMFFLKFQEECDMRCNGYELEQMTGWNYSPRLSSVHGTDDPFHHDHLLKNSECGNDT 473
           WSSMFFLKFQE+ ++R N YELEQ+TGWN+SPRLSSVHGTDDPFH DHLLK+S C NDT
Sbjct: 361 WSSMFFLKFQEDSNVRSNEYELEQITGWNFSPRLSSVHGTDDPFHQDHLLKSSGCSNDT 537


>BI497846 
          Length = 421

 Score =  159 bits (401), Expect = 3e-39
 Identities = 73/91 (80%), Positives = 80/91 (87%)
 Frame = +1

Query: 383 ILSTSDLARADLFHNALNEIVHLMKTNLAKDYWSSMFFLKFQEECDMRCNGYELEQMTGW 442
           ILSTS L R DLFHNALNEI+ LMKTNLA+DYWSSMFFLKFQE+ ++R N YELEQMTGW
Sbjct: 1   ILSTSSLTRPDLFHNALNEIIQLMKTNLARDYWSSMFFLKFQEDTNVRSNEYELEQMTGW 180

Query: 443 NYSPRLSSVHGTDDPFHHDHLLKNSECGNDT 473
           N+SPRLSSVHG DDPFH DHLLK+S C NDT
Sbjct: 181 NFSPRLSSVHGIDDPFHQDHLLKSSGCSNDT 273


>TC220725 weakly similar to PIR|D88560|D88560 protein F58A4.1 [imported] -
           Caenorhabditis elegans {Caenorhabditis elegans;} ,
           partial (10%)
          Length = 783

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/44 (40%), Positives = 25/44 (55%)
 Frame = -2

Query: 122 LYFIFVKRRLPLIRSFLLIPLILLPWIIGAAVIHIKKPLSNRCH 165
           L +IFVK+  PL+ S LL P +LL  +  A ++H       RCH
Sbjct: 569 LQWIFVKKTFPLLVSLLLSPFLLLTVVAAAFLLH-------RCH 459


>TC204249 UP|Q9SB11 (Q9SB11) Glycinin, complete
          Length = 1916

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
 Frame = -3

Query: 16   YVAVTVSILSFILLLIWS-----IFPFIVHKVPRTKGSGFWIPVIQVVASFNLLLSIMTI 70
            +V V V +L F L L WS     IF F++  V  T    +    ++      ++   + I
Sbjct: 1065 FVLVLVLVL-FTLSLAWSTRTRFIFIFVLVLVLFTLSMAWSARRVRGNLFIFIIFVFIFI 889

Query: 71   SSNLKRAIGGSHVTCGQVSFHNHTLCLFPVWGEGPLGFGLL--------LSSRITQAFQL 122
               L   +G  +    + SFH H L  F VW    L + L+        + +  T+    
Sbjct: 888  FILLFLPLGADNA---ETSFHCHDLLPFVVWRLKFLSYVLVGVEGLCQEVFAEATEHAAT 718

Query: 123  YFIFVKRRLPLIRSFLLIPLILLPWIIGAAVIHIKKP 159
            +F+F+   LPL+ S +   L+LL  + G  V++I  P
Sbjct: 717  FFLFLLLVLPLLASTMTFLLLLL--LHGLWVLYIWVP 613


>TC206195 similar to UP|Q8GZT8 (Q8GZT8) PTEN-like protein, partial (58%)
          Length = 1688

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 398 ALNEIVHLMKTNLAKDYW-SSMFFLKFQEECDMR 430
           +L  +VH  K  LAKD W S  F+L+    CD+R
Sbjct: 711 SLPSLVHQTKNLLAKDPWFSDAFWLRTTHHCDLR 610


>CA852155 similar to GP|15391731|em nitrite transporter {Cucumis sativus},
           partial (22%)
          Length = 516

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = +1

Query: 166 MSVQWTIPVVCLHALYVATLVGVTAAVHHIEFRFDELRDLWRGILVSSVSVAVWVTAYI 224
           +SV W +P  CLH +    +V     V H+EF +D+  +  R    +   +   +  Y+
Sbjct: 79  ISVFWLVPQYCLHGVAEVFMV-----VGHLEFLYDQSPESMRSTATALYCITTAIGNYV 240


>TC228825 weakly similar to UP|Q9V5S5 (Q9V5S5) CG33473-PB (Transcription
           factor DKLF) (HL07808p), partial (3%)
          Length = 1050

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
 Frame = +2

Query: 243 LLVLASILVLAFFSISSSQPLLS------QISLRRRESREFRTM-----GQALGIPDSGV 291
           +L  + + VL    ++  QP+++      +IS  +RE R+F+ +     GQALGI +   
Sbjct: 539 ILQPSGMFVLKRDQLADHQPVVTSGNESQEISAEQREVRDFQHIVTILSGQALGIVEDEW 718

Query: 292 LTQSEPISRVDPNEPLDKLLLNKKFRQS 319
             +   +   DP   L  LL+  KF +S
Sbjct: 719 DEEEFDVDDFDPEYAL*SLLV*SKFVKS 802


>TC213878 homologue to UP|Q8SCS3 (Q8SCS3) PHIKZ239, partial (9%)
          Length = 619

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/72 (31%), Positives = 29/72 (39%)
 Frame = -3

Query: 7   AVKGGCPTDYVAVTVSILSFILLLIWSIFPFIVHKVPRTKGSGFWIPVIQVVASFNLLLS 66
           ++K  CPT Y     S L   +   W I    VH VPR      WIP I++   +     
Sbjct: 506 SIKARCPTKYKFPVTSNLEQ*VFT-WQITGHAVHGVPRRSLKL*WIPPIKLFEQYP-RYR 333

Query: 67  IMTISSNLKRAI 78
           I  I  N  R I
Sbjct: 332 IFLIHGNKSRTI 297


>TC206831 similar to UP|Q96400 (Q96400) Nitrite transporter, partial (68%)
          Length = 1500

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 21/76 (27%), Positives = 33/76 (42%)
 Frame = +1

Query: 151 AAVIHIKKPLSNRCHMSVQWTIPVVCLHALYVATLVGVTAAVHHIEFRFDELRDLWRGIL 210
           AA  H+         +SV W +P  CLH      +  +  +V H+EF F++  +  R   
Sbjct: 883 AAKYHLLDDPKATIPISVFWLVPQYCLHG-----VAEIFMSVGHLEFLFEQSPESMR--- 1038

Query: 211 VSSVSVAVWVTAYILN 226
            SS +    +T  I N
Sbjct: 1039-SSATALYCITTAIGN 1083


>TC223303 similar to UP|Q8RV26 (Q8RV26) Oligopeptide transporter-like
           protein, partial (20%)
          Length = 432

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 215 SVAVWVTAYILNEIHDNISWLQVVSRFLLLVLASILVLAFFSISS 259
           S  ++VT +ILN + DN+ W   V  F +  +A +  L  F I +
Sbjct: 289 SAGLFVTLFILNYVQDNVGW---VLGFGIPCIAMLTALVIFLIGT 414


>TC207129 homologue to UP|Q84XV9 (Q84XV9) Phosphoribosylformylglycinamidine
            synthase, complete
          Length = 4134

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 11/36 (30%), Positives = 16/36 (43%)
 Frame = +2

Query: 431  CNGYELEQMTGWNYSPRLSSVHGTDDPFHHDHLLKN 466
            CNG +L  + GW   P++  VHG          + N
Sbjct: 3416 CNGCQLMALLGWVPGPQVGGVHGAGGDLSQPRFIHN 3523


>AI442623 
          Length = 214

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
 Frame = -3

Query: 213 SVSVAVWVTAYILNEIHDNISWLQVVS---------RFLLLVLASILVLAFFSISSSQPL 263
           ++SV+VW+  Y  ++   ++ WL VVS          FLL   A    L+ F++ SS+ L
Sbjct: 182 TLSVSVWLGLYF*SKCKGDVPWLGVVSPLISIPAFLNFLLSFAAFCHFLSAFAVCSSKIL 3


>TC222287 
          Length = 524

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +3

Query: 203 RDLWRGILVSSVSVAVWVTAYILNEIHDNISWLQVVSRFLLLVLASILVLAF 254
           R++W+     ++ V   +TAYI    H  +S+    S+ +LL  A+++VL F
Sbjct: 246 REIWKCATWMTIIVPTSMTAYIYLYSHGEVSY--AASQPVLLYAAAVMVLIF 395


>TC230924 UP|ATPH_LOTJA (P12231) ATP synthase C chain  (Lipid-binding
           protein) (Subunit III) , complete
          Length = 567

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 116 ITQAFQLYFIFVKRRLPLIRSFLLIPLILLPWIIGAAVIHI 156
           I+    L++I V R+L  I+ FLL+ L+LL W  G  ++ +
Sbjct: 272 ISLTISLFYI*VTRKLS*IQLFLLLLLLLLGWP*GLLLLDL 394


>TC222233 similar to UP|Q6IMT1 (Q6IMT1) SAB, partial (7%)
          Length = 597

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 24/85 (28%), Positives = 35/85 (40%), Gaps = 2/85 (2%)
 Frame = -3

Query: 312 LNKKFRQSFMGFADSCLAG-ESVHFFDEVHELSKISEHDCVRRIYMARHIIE-KYMVAGA 369
           L+K  R  F  F   C A   S+ FF   H          +  + + R  +  KY+V   
Sbjct: 445 LSKSSRGEFPSFGAPCRASTRSITFFP--HSDGGFHADKSISDLTLGRQFLTTKYLVVNR 272

Query: 370 AMEINISHRSKQEILSTSDLARADL 394
           AM  ++  RSK  I+S    +  DL
Sbjct: 271 AMPTSL*SRSKSYIMSLISASAKDL 197


>TC225943 similar to UP|NU4C_LOTJA (Q9BBP3) NAD(P)H-quinone oxidoreductase
            chain 4, chloroplast  (NAD(P)H dehydrogenase, chain 4)
            (NADH-plastoquinone oxidoreductase chain 4) , partial
            (86%)
          Length = 1432

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 16/52 (30%), Positives = 24/52 (45%)
 Frame = +3

Query: 409  NLAKDYWSSMFFLKFQEECDMRCNGYELEQMTGWNYSPRLSSVHGTDDPFHH 460
            N+++ YW   FFL   E   +      L +  GWN  P   ++HG    FH+
Sbjct: 1029 NISRIYWRCAFFLGGNE---L**TTSSLSRRNGWNGYPNAKNIHG----FHY 1163


>TC209182 similar to PIR|T51854|T51854 RING-H2 finger protein RHF2a
           [imported] - Arabidopsis thaliana {Arabidopsis
           thaliana;} , partial (16%)
          Length = 649

 Score = 28.5 bits (62), Expect = 6.8
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 225 LNEIHDNISWLQVVSRFLLLVLASILVLAFFS 256
           L ++ D +SWLQ+   F L++ A +LVL  +S
Sbjct: 291 LLQLLDLLSWLQIAKEFTLMIEALLLVLLQWS 386


>BU083551 homologue to GP|7301548|gb|A CG6066-PA {Drosophila melanogaster},
           partial (3%)
          Length = 409

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = -3

Query: 245 VLASILVLAFFSISSSQPLLSQISLRRRESREFRTMGQALGIPDS 289
           +LA I+   F S SSS PLL    L R   REFR +  +  + DS
Sbjct: 374 LLAGIIPPIFASSSSSSPLLLL**LFRTFDREFRFLNSSPSLHDS 240


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.327    0.140    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,147,904
Number of Sequences: 63676
Number of extensions: 432000
Number of successful extensions: 2921
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2919
length of query: 475
length of database: 12,639,632
effective HSP length: 101
effective length of query: 374
effective length of database: 6,208,356
effective search space: 2321925144
effective search space used: 2321925144
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)