BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33212.1 39 aa
(39 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9BBR6 Cytochrome b559 beta subunit [Lotus japonicus] 81 9e-15
UniRef100_P62095 Cytochrome b559 beta subunit [Arabidopsis thali... 80 2e-14
UniRef100_Q67HC1 Cytochrome b-559 beta subunit [Allium textile] 79 3e-14
UniRef100_P46613 Cytochrome b559 beta subunit [Beta vulgaris] 79 3e-14
UniRef100_Q6EYT3 Cytochrome b-559 beta subunit [Euptelea polyandra] 78 6e-14
UniRef100_Q67HN3 Cytochrome b-559 beta subunit [Cartonema philyd... 78 7e-14
UniRef100_Q6EYP5 Cytochrome b-559 beta subunit [Spinacia oleracea] 78 7e-14
UniRef100_Q85X32 Cytochrome b559 beta subunit [Pinus koraiensis] 78 7e-14
UniRef100_Q6QY64 Cytochrome b559 beta subunit [Oryza sativa] 77 1e-13
UniRef100_Q67HL7 Cytochrome b-559 beta subunit [Mayaca fluviatilis] 77 1e-13
UniRef100_Q6EYQ1 Cytochrome b-559 beta subunit [Ribes aureum] 77 1e-13
UniRef100_P41616 Cytochrome b559 beta subunit [Pinus thunbergii] 77 1e-13
UniRef100_Q67HQ7 Cytochrome b-559 beta subunit [Burmannia capitata] 76 2e-13
UniRef100_Q8WI05 Cytochrome b559 beta subunit [Psilotum nudum] 76 2e-13
UniRef100_P06853 Cytochrome b559 beta subunit [Marchantia polymo... 76 2e-13
UniRef100_Q8MB67 PsbF [Hildebrandtia sp. Phillipson and Milijaon... 76 3e-13
UniRef100_Q7H894 PsbF [Wilsonia backhousei] 76 3e-13
UniRef100_Q8MB98 PsbF [Merremia peltata] 75 4e-13
UniRef100_Q8MB75 PsbF [Tetralocularia pennellii] 75 4e-13
UniRef100_Q71L79 Cytochrome b-559 beta subunit [Cedrus deodara] 75 4e-13
>UniRef100_Q9BBR6 Cytochrome b559 beta subunit [Lotus japonicus]
Length = 39
Score = 80.9 bits (198), Expect = 9e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
>UniRef100_P62095 Cytochrome b559 beta subunit [Arabidopsis thaliana]
Length = 39
Score = 79.7 bits (195), Expect = 2e-14
Identities = 38/39 (97%), Positives = 39/39 (99%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
>UniRef100_Q67HC1 Cytochrome b-559 beta subunit [Allium textile]
Length = 39
Score = 79.3 bits (194), Expect = 3e-14
Identities = 37/39 (94%), Positives = 39/39 (99%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLA+HGLAVPTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSISAMQFIQR 39
>UniRef100_P46613 Cytochrome b559 beta subunit [Beta vulgaris]
Length = 39
Score = 79.3 bits (194), Expect = 3e-14
Identities = 37/39 (94%), Positives = 39/39 (99%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLA+PTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAIPTVSFLGSISAMQFIQR 39
>UniRef100_Q6EYT3 Cytochrome b-559 beta subunit [Euptelea polyandra]
Length = 39
Score = 78.2 bits (191), Expect = 6e-14
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGL VPTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLXVPTVSFLGSISAMQFIQR 39
>UniRef100_Q67HN3 Cytochrome b-559 beta subunit [Cartonema philydroides]
Length = 39
Score = 77.8 bits (190), Expect = 7e-14
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTVSF GSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVSFXGSISAMQFIQR 39
>UniRef100_Q6EYP5 Cytochrome b-559 beta subunit [Spinacia oleracea]
Length = 39
Score = 77.8 bits (190), Expect = 7e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLA+HGLAVPTVSFLGSI AMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSIXAMQFIQR 39
>UniRef100_Q85X32 Cytochrome b559 beta subunit [Pinus koraiensis]
Length = 39
Score = 77.8 bits (190), Expect = 7e-14
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MT+DRTFPIFTVRWLAVHGLAVPTV FLGSISAMQFIQR
Sbjct: 1 MTLDRTFPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR 39
>UniRef100_Q6QY64 Cytochrome b559 beta subunit [Oryza sativa]
Length = 50
Score = 77.4 bits (189), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTV FLGSISAMQFIQR
Sbjct: 12 MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR 50
>UniRef100_Q67HL7 Cytochrome b-559 beta subunit [Mayaca fluviatilis]
Length = 39
Score = 77.4 bits (189), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVH LAVPTVSFLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHALAVPTVSFLGSISAMQFIQR 39
>UniRef100_Q6EYQ1 Cytochrome b-559 beta subunit [Ribes aureum]
Length = 39
Score = 77.4 bits (189), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTVSFLGSISAM FIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVSFLGSISAMXFIQR 39
>UniRef100_P41616 Cytochrome b559 beta subunit [Pinus thunbergii]
Length = 39
Score = 77.0 bits (188), Expect = 1e-13
Identities = 36/39 (92%), Positives = 38/39 (97%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLA+PTV FLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAIPTVFFLGSISAMQFIQR 39
>UniRef100_Q67HQ7 Cytochrome b-559 beta subunit [Burmannia capitata]
Length = 39
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/39 (89%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MT+DRT+PIFTVRWLAVHGLA+PTV FLGSISAMQFIQR
Sbjct: 1 MTLDRTYPIFTVRWLAVHGLAIPTVFFLGSISAMQFIQR 39
>UniRef100_Q8WI05 Cytochrome b559 beta subunit [Psilotum nudum]
Length = 39
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/39 (89%), Positives = 38/39 (96%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MT+DRT+PIFTVRWLA+HGLAVPTV FLGSISAMQFIQR
Sbjct: 1 MTLDRTYPIFTVRWLAIHGLAVPTVFFLGSISAMQFIQR 39
>UniRef100_P06853 Cytochrome b559 beta subunit [Marchantia polymorpha]
Length = 39
Score = 76.3 bits (186), Expect = 2e-13
Identities = 36/39 (92%), Positives = 38/39 (97%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTV FLG+ISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVFFLGAISAMQFIQR 39
>UniRef100_Q8MB67 PsbF [Hildebrandtia sp. Phillipson and Milijaona 3624]
Length = 39
Score = 75.9 bits (185), Expect = 3e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGL VPTV FLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLTVPTVFFLGSISAMQFIQR 39
>UniRef100_Q7H894 PsbF [Wilsonia backhousei]
Length = 39
Score = 75.9 bits (185), Expect = 3e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWL VHGLAVPTV FLGSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLXVHGLAVPTVFFLGSISAMQFIQR 39
>UniRef100_Q8MB98 PsbF [Merremia peltata]
Length = 39
Score = 75.5 bits (184), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTV F GSISAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVFFXGSISAMQFIQR 39
>UniRef100_Q8MB75 PsbF [Tetralocularia pennellii]
Length = 39
Score = 75.5 bits (184), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MTIDRT+PIFTVRWLAVHGLAVPTV FLGS SAMQFIQR
Sbjct: 1 MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSXSAMQFIQR 39
>UniRef100_Q71L79 Cytochrome b-559 beta subunit [Cedrus deodara]
Length = 39
Score = 75.5 bits (184), Expect = 4e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 1 MTIDRTFPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR 39
MT DRT+PIFTVRWLAVHGLAVPTV FLGSISAMQFIQR
Sbjct: 1 MTTDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR 39
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.335 0.142 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,243,093
Number of Sequences: 2790947
Number of extensions: 837079
Number of successful extensions: 3911
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3846
Number of HSP's gapped (non-prelim): 65
length of query: 39
length of database: 848,049,833
effective HSP length: 15
effective length of query: 24
effective length of database: 806,185,628
effective search space: 19348455072
effective search space used: 19348455072
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 69 (31.2 bits)
Description of BAB33212.1