BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33181.1 120 aa
(120 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33181.1| NADH dehydrogenase D3 [Lotus corniculatus var. j... 244 3e-64
gb|AAB86905.1| NADH-plastoquinone oxidoreductase [Lupinus luteus... 229 2e-59
emb|CAB88734.1| NADH dehydrogenase ND3 subunit [Spinacia olerace... 226 8e-59
ref|YP_086971.1| NADH dehydrogenase subunit 3 [Panax ginseng] gi... 226 1e-58
emb|CAA77358.1| NADH dehydrogenase ND3 subunit [Nicotiana tabacu... 226 1e-58
emb|CAC88049.1| NADH dehydrogenase ND3 subunit [Atropa belladonn... 225 2e-58
emb|CAD28726.1| NADH dehydrogenase D3 [Calycanthus floridus var.... 224 5e-58
emb|CAJ00763.1| NADH dehydrogenase subunit C [Cucumis sativus] 221 2e-57
emb|CAD45112.1| NADH dehydrogenase D3 [Amborella trichopoda] gi|... 221 3e-57
gb|AAO72305.1| NdhC [Hordeum vulgare] 221 4e-57
emb|CAB67130.1| NADH-plastoquinone oxidoreductase subunit 3 [Oen... 220 7e-57
dbj|BAA84390.1| NADH dehydrogenase D3 [Arabidopsis thaliana] gi|... 219 1e-56
ref|NP_114264.1| NADH dehydrogenase subunit 3 [Triticum aestivum... 219 2e-56
emb|CAF28598.1| NADH dehydrogenase D3 [Nymphaea alba] gi|5034678... 218 3e-56
gb|AAP54716.1| NADH dehydrogenase ND3 [Oryza sativa (japonica cu... 216 8e-56
emb|CAA60291.1| NADH dehydrogenase D3 [Zea mays] gi|48478678|gb|... 216 1e-55
emb|CAA35481.1| unnamed protein product [Zea mays] 213 7e-55
dbj|BAC85047.1| NADH dehydrogenase ND3 subunit [Physcomitrella p... 194 5e-49
dbj|BAC55449.1| NADH dehydrogenase ND3 subunit [Anthoceros formo... 191 4e-48
dbj|BAB84221.1| NADH dehydrogenase ND3 subunit [Psilotum nudum] ... 190 6e-48
>dbj|BAB33181.1| NADH dehydrogenase D3 [Lotus corniculatus var. japonicus]
gi|13518423|ref|NP_084783.1| NADH dehydrogenase subunit
3 [Lotus corniculatus var. japonicus]
gi|23821911|sp|Q9BBT8|NU3C_LOTJA NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 244 bits (623), Expect = 3e-64
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI
Sbjct: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
>gb|AAB86905.1| NADH-plastoquinone oxidoreductase [Lupinus luteus]
gi|1709379|sp|P52765|NU3C_LUPLU NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 229 bits (583), Expect = 2e-59
Identities = 112/120 (93%), Positives = 115/120 (95%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFLIIS IPILAF ISG LAPI+KGPEKLSSYESGIEPMGDAWLQF+I
Sbjct: 1 MFLLYEYDIFWAFLIISSLIPILAFLISGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLILIVG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
>emb|CAB88734.1| NADH dehydrogenase ND3 subunit [Spinacia oleracea]
gi|11497533|ref|NP_054941.1| NADH dehydrogenase subunit
3 [Spinacia oleracea] gi|18203264|sp|Q9M3L9|NU3C_SPIOL
NAD(P)H-quinone oxidoreductase chain 3, chloroplast
(NAD(P)H dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 226 bits (577), Expect = 8e-59
Identities = 110/120 (91%), Positives = 114/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFLIIS IPILAF SG LAPI+KGPEKLSSYESGIEPMGDAWLQF+I
Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFLFSGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFD+LG+SVFIEALIFVLILIVG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDILGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
>ref|YP_086971.1| NADH dehydrogenase subunit 3 [Panax ginseng]
gi|51235318|gb|AAT98514.1| NADH dehydrogenase subunit 3
[Panax ginseng]
Length = 120
Score = 226 bits (576), Expect = 1e-58
Identities = 111/120 (92%), Positives = 115/120 (95%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFLIIS IPILAF ISG LAPI+KGPEKLSSYESGIEPMG+AWLQF+I
Sbjct: 1 MFLLYEYDIFWAFLIISSLIPILAFFISGVLAPISKGPEKLSSYESGIEPMGNAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLILIVG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
>emb|CAA77358.1| NADH dehydrogenase ND3 subunit [Nicotiana tabacum]
gi|11465962|ref|NP_054504.1| NADH dehydrogenase subunit
3 [Nicotiana tabacum] gi|128692|sp|P06258|NU3C_TOBAC
NAD(P)H-quinone oxidoreductase chain 3, chloroplast
(NAD(P)H dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3) gi|66160|pir||DENTN3 NADH2
dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 - common
tobacco chloroplast gi|225206|prf||1211235AL NADH
dehydrogenase 3-like ORF 120
Length = 120
Score = 226 bits (575), Expect = 1e-58
Identities = 108/120 (90%), Positives = 114/120 (95%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYD FWAFLIISI +PILAF ISG LAPI+KGPEKLS+YESGIEPMGDAWLQF+I
Sbjct: 1 MFLLYEYDFFWAFLIISILVPILAFLISGVLAPISKGPEKLSTYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEA IFVLILI+G VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEAFIFVLILIIGLVYAWRKGALEWS 120
>emb|CAC88049.1| NADH dehydrogenase ND3 subunit [Atropa belladonna]
gi|28261722|ref|NP_783237.1| NADH dehydrogenase subunit
3 [Atropa belladonna]
Length = 120
Score = 225 bits (574), Expect = 2e-58
Identities = 108/120 (90%), Positives = 114/120 (95%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYD FWAFLIISI +PILAF ISG LAPI+KGPEKLS+YESGIEPMGDAWLQF+I
Sbjct: 1 MFLLYEYDFFWAFLIISILVPILAFFISGVLAPISKGPEKLSTYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEA IFVLILI+G VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEAFIFVLILIIGLVYAWRKGALEWS 120
>emb|CAD28726.1| NADH dehydrogenase D3 [Calycanthus floridus var. glaucus]
gi|32480848|ref|NP_862759.1| NADH dehydrogenase subunit
3 [Calycanthus floridus var. glaucus]
Length = 120
Score = 224 bits (570), Expect = 5e-58
Identities = 110/120 (91%), Positives = 114/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFWAFLIIS IPILAF ISG LAPI +GPEKLSSYESGIEPMGDAWLQF+I
Sbjct: 1 MFLLHEYDIFWAFLIISSVIPILAFLISGVLAPIREGPEKLSSYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLI IVGSVYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIPIVGSVYAWRKGALEWS 120
>emb|CAJ00763.1| NADH dehydrogenase subunit C [Cucumis sativus]
Length = 120
Score = 221 bits (564), Expect = 2e-57
Identities = 108/120 (90%), Positives = 113/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFW FLIIS IPILAF ISG LAP++K PEKLSSYESGIEPMGDAW+QF+I
Sbjct: 1 MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLILIVG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120
>emb|CAD45112.1| NADH dehydrogenase D3 [Amborella trichopoda]
gi|34500919|ref|NP_904104.1| NADH dehydrogenase D3
[Amborella trichopoda]
Length = 120
Score = 221 bits (563), Expect = 3e-57
Identities = 107/120 (89%), Positives = 115/120 (95%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFWAFL+IS IPILAF ISG LAPI++GPEK+SSYESGIEPMGDAW+QF+I
Sbjct: 1 MFLLHEYDIFWAFLMISSVIPILAFLISGVLAPISQGPEKVSSYESGIEPMGDAWIQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLI IVGSVYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLIPIVGSVYAWRKGALEWS 120
>gb|AAO72305.1| NdhC [Hordeum vulgare]
Length = 120
Score = 221 bits (562), Expect = 4e-57
Identities = 105/120 (87%), Positives = 114/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFW FLII+ IPILAF+ISG LAP+++GPEKLSSYESGIEPMG AW+QF+I
Sbjct: 1 MFLLYEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPEKLSSYESGIEPMGGAWVQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLIL+VG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILVVGLVYAWRKGALEWS 120
>emb|CAB67130.1| NADH-plastoquinone oxidoreductase subunit 3 [Oenothera elata subsp.
hookeri] gi|13518306|ref|NP_084665.1| NADH dehydrogenase
subunit 3 [Oenothera elata subsp. hookeri]
gi|22256942|sp|Q9MTP5|NU3C_OENHO NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 220 bits (560), Expect = 7e-57
Identities = 105/120 (87%), Positives = 113/120 (93%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFLIIS IPILAF ISG LAP + GPEKLSSYESGIEPMGDAWLQF+I
Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFRISGLLAPTSIGPEKLSSYESGIEPMGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVET+FLYPWA+SFD+LG+SVFIEALIFVLIL++G VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETIFLYPWALSFDILGVSVFIEALIFVLILVLGLVYAWRKGALEWS 120
>dbj|BAA84390.1| NADH dehydrogenase D3 [Arabidopsis thaliana]
gi|7525038|ref|NP_051064.1| NADH dehydrogenase subunit 3
[Arabidopsis thaliana] gi|6685677|sp|P56751|NU3C_ARATH
NAD(P)H-quinone oxidoreductase chain 3, chloroplast
(NAD(P)H dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 219 bits (558), Expect = 1e-56
Identities = 105/120 (87%), Positives = 112/120 (92%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFL+IS IP+LAF ISG L+PI KGPEKLSSYESGIEP+GDAWLQF+I
Sbjct: 1 MFLLYEYDIFWAFLLISSAIPVLAFLISGVLSPIRKGPEKLSSYESGIEPIGDAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+S FIEA IFVLILI+G VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEAFIFVLILILGLVYAWRKGALEWS 120
>ref|NP_114264.1| NADH dehydrogenase subunit 3 [Triticum aestivum]
gi|128693|sp|P26303|NU3C_WHEAT NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3) gi|556459|gb|AAA84730.1|
NADPH-plastoquinone oxireductase gi|283030|pir||S27251
NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 -
wheat chloroplast gi|13928210|dbj|BAB47039.1| NADH
dehydrogenase ND3 [Triticum aestivum]
Length = 120
Score = 219 bits (557), Expect = 2e-56
Identities = 104/120 (86%), Positives = 114/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFW FLII+ IPILAF+ISG LAP+++GPEKLSSYESGIEPMG AW+QF+I
Sbjct: 1 MFLLHEYDIFWTFLIIASLIPILAFSISGLLAPVSEGPEKLSSYESGIEPMGGAWVQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEALIFVLIL+VG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILVVGLVYAWRKGALEWS 120
>emb|CAF28598.1| NADH dehydrogenase D3 [Nymphaea alba] gi|50346787|ref|YP_053160.1|
NADH dehydrogenase D3 [Nymphaea alba]
Length = 120
Score = 218 bits (555), Expect = 3e-56
Identities = 104/120 (86%), Positives = 114/120 (94%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLLYEYDIFWAFL+IS IPILAF ISG LAPI++GPEKLSSYESGIEP+GDAW+QF+I
Sbjct: 1 MFLLYEYDIFWAFLMISSVIPILAFLISGVLAPISEGPEKLSSYESGIEPIGDAWIQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWA+SFD+LG+ VFIEALIFVLI +VGSVYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAVSFDILGVYVFIEALIFVLIPVVGSVYAWRKGALEWS 120
>gb|AAP54716.1| NADH dehydrogenase ND3 [Oryza sativa (japonica cultivar-group)]
gi|11989|emb|CAA34001.1| unnamed protein product [Oryza
sativa (japonica cultivar-group)]
gi|37536254|ref|NP_922429.1| NADH dehydrogenase ND3
[Oryza sativa (japonica cultivar-group)]
gi|20146745|gb|AAM12481.1| NADH dehydrogenase ND3 [Oryza
sativa (japonica cultivar-group)]
gi|11466792|ref|NP_039388.1| NADH dehydrogenase subunit
3 [Oryza sativa (japonica cultivar-group)]
gi|50233976|ref|YP_052754.1| NADH dehydrogenase subunit
3 [Oryza nivara] gi|42795559|gb|AAS46125.1| NADH
dehydrogenase subunit 3 [Oryza sativa (japonica
cultivar-group)] gi|42795623|gb|AAS46188.1| NADH
dehydrogenase subunit 3 [Oryza sativa (japonica
cultivar-group)] gi|42795492|gb|AAS46059.1| NADH
dehydrogenase subunit 3 [Oryza sativa (indica
cultivar-group)] gi|66161|pir||DERZN3 NADH2
dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 - rice
chloroplast gi|49615000|dbj|BAD26783.1| NADH
dehydrogenase subunit 3 [Oryza nivara]
gi|128690|sp|P12126|NU3C_ORYSA NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3) gi|226610|prf||1603356AG NADH
dehydrogenase ND3
Length = 120
Score = 216 bits (551), Expect = 8e-56
Identities = 105/120 (87%), Positives = 111/120 (92%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFWAFLII+ IPILAF IS LAP+ +GPEKLSSYESGIEPMG AWLQF+I
Sbjct: 1 MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEA IFVLIL+VG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS 120
>emb|CAA60291.1| NADH dehydrogenase D3 [Zea mays] gi|48478678|gb|AAT44698.1| NADH
dehydrogenase subunit 3 [Saccharum hybrid cultivar
SP-80-3280] gi|50812533|ref|YP_054636.1| NADH
dehydrogenase ND3 subunit [Saccharum officinarum]
gi|11467197|ref|NP_043030.1| NADH dehydrogenase subunit
3 [Zea mays] gi|48478776|ref|YP_024384.1| NADH
dehydrogenase subunit 3 [Saccharum hybrid cultivar
SP-80-3280] gi|49659517|dbj|BAD27298.1| NADH
dehydrogenase ND3 subunit [Saccharum officinarum]
gi|128688|sp|P19044|NU3C_MAIZE NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3) gi|1363566|pir||S58557 NADH2
dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 - maize
chloroplast
Length = 120
Score = 216 bits (549), Expect = 1e-55
Identities = 103/120 (85%), Positives = 111/120 (91%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFW FLII+ IPIL F ISG LAP+++GPEKLSSYESGIEPMG AWLQF+I
Sbjct: 1 MFLLHEYDIFWTFLIIASLIPILVFWISGLLAPVSEGPEKLSSYESGIEPMGGAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEA IFVLIL+VG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEAFIFVLILVVGLVYAWRKGALEWS 120
>emb|CAA35481.1| unnamed protein product [Zea mays]
Length = 120
Score = 213 bits (543), Expect = 7e-55
Identities = 102/120 (85%), Positives = 110/120 (91%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFLL+EYDIFW FLII+ IPIL F ISG LAP+++GPEKLSSY SGIEPMG AWLQF+I
Sbjct: 1 MFLLHEYDIFWTFLIIASLIPILVFWISGLLAPVSEGPEKLSSYXSGIEPMGGAWLQFRI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFVVFDVETVFLYPWAMSFDVLG+SVFIEA IFVLIL+VG VYAWRKGALEWS
Sbjct: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEAFIFVLILVVGLVYAWRKGALEWS 120
>dbj|BAC85047.1| NADH dehydrogenase ND3 subunit [Physcomitrella patens subsp.
patens] gi|34501410|ref|NP_904197.1| NADH dehydrogenase
subunit 3 [Physcomitrella patens subsp. patens]
Length = 121
Score = 194 bits (492), Expect = 5e-49
Identities = 94/121 (77%), Positives = 109/121 (89%), Gaps = 1/121 (0%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPIN-KGPEKLSSYESGIEPMGDAWLQFQ 59
MFLL +Y+ F+ FL+++ IPILAF+IS FLAP N +GPEKL+SYESGIEPMGDAW+QFQ
Sbjct: 1 MFLLPKYNSFFIFLLLASVIPILAFSISKFLAPNNTQGPEKLTSYESGIEPMGDAWIQFQ 60
Query: 60 IRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEW 119
IRYYMFALVFV+FDVETVFLYPWAMSF+ LG+S FIEAL+FV ILI+G VYAWRKGALEW
Sbjct: 61 IRYYMFALVFVIFDVETVFLYPWAMSFNDLGLSAFIEALVFVFILIIGLVYAWRKGALEW 120
Query: 120 S 120
S
Sbjct: 121 S 121
>dbj|BAC55449.1| NADH dehydrogenase ND3 subunit [Anthoceros formosae]
gi|28202177|ref|NP_777418.1| NADH dehydrogenase subunit
3 [Anthoceros formosae] gi|27807879|dbj|BAC55354.1| NADH
dehydrogenase ND3 subunit [Anthoceros formosae]
gi|29337180|sp|Q31792|NU3C_ANTFO NAD(P)H-quinone
oxidoreductase chain 3, chloroplast (NAD(P)H
dehydrogenase, chain 3) (NADH-plastoquinone
oxidoreductase chain 3)
Length = 120
Score = 191 bits (485), Expect = 4e-48
Identities = 88/120 (73%), Positives = 102/120 (84%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MFL+ +Y+ FW FL+I+ IP +AF+IS +API+KGPEK +SYE GIEPMGDAW+QFQI
Sbjct: 1 MFLVSKYNYFWIFLLIASLIPTIAFSISRVIAPISKGPEKFTSYECGIEPMGDAWIQFQI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYYMFALVFV+FDVETVFLYPWAMSF LGI FIE IFV ILI+G +YAWRKGALEWS
Sbjct: 61 RYYMFALVFVIFDVETVFLYPWAMSFKQLGIPAFIEVFIFVFILIIGLIYAWRKGALEWS 120
>dbj|BAB84221.1| NADH dehydrogenase ND3 subunit [Psilotum nudum]
gi|18860316|ref|NP_569634.1| NADH dehydrogenase subunit
3 [Psilotum nudum]
Length = 120
Score = 190 bits (483), Expect = 6e-48
Identities = 90/120 (75%), Positives = 102/120 (85%)
Query: 1 MFLLYEYDIFWAFLIISIFIPILAFTISGFLAPINKGPEKLSSYESGIEPMGDAWLQFQI 60
MF+L +Y FW F++IS IP+LA IS LAP++KGPEK++SYESGIEPMGDAW+QFQI
Sbjct: 1 MFMLPKYQTFWVFIMISSLIPLLALLISRLLAPVSKGPEKMTSYESGIEPMGDAWIQFQI 60
Query: 61 RYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEALIFVLILIVGSVYAWRKGALEWS 120
RYY FALVFV+FDVETVFLYPWAMSF LGI FIEALIFV ILI+G VYAWRK ALEWS
Sbjct: 61 RYYSFALVFVIFDVETVFLYPWAMSFYELGIFAFIEALIFVFILIIGLVYAWRKRALEWS 120
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.333 0.149 0.480
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,072,977
Number of Sequences: 2540612
Number of extensions: 7604255
Number of successful extensions: 34930
Number of sequences better than 10.0: 1860
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 31846
Number of HSP's gapped (non-prelim): 1868
length of query: 120
length of database: 863,360,394
effective HSP length: 96
effective length of query: 24
effective length of database: 619,461,642
effective search space: 14867079408
effective search space used: 14867079408
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 68 (30.8 bits)
Description of BAB33181.1