Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0590c.4
         (84 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q04129 Wound induced protein [Lycopersicon esculentum]       54  1e-06
UniRef100_O82615 T9A4.6 protein [Arabidopsis thaliana]                 54  1e-06
UniRef100_Q8GY66 Hypothetical protein [Arabidopsis thaliana]           53  2e-06
UniRef100_Q6ZBU1 Hypothetical protein P0577G06.2 [Oryza sativa]        50  1e-05
UniRef100_Q7XQS4 OSJNBa0043L09.23 protein [Oryza sativa]               49  3e-05
UniRef100_Q655G5 Hypothetical protein P0009H10.12 [Oryza sativa]       47  9e-05
UniRef100_Q7XQS9 OSJNBa0043L09.18 protein [Oryza sativa]               45  4e-04
UniRef100_Q9SBR5 Putative wound-induced protein [Medicago varia]       43  0.002
UniRef100_Q7XQS2 OSJNBa0043L09.25 protein [Oryza sativa]               43  0.002
UniRef100_Q7XQS3 OSJNBa0043L09.24 protein [Oryza sativa]               42  0.005
UniRef100_UPI00003AAC8C UPI00003AAC8C UniRef100 entry                  39  0.032
UniRef100_Q8LE02 Hypothetical protein [Arabidopsis thaliana]           39  0.042
UniRef100_O81873 Hypothetical protein T16L1.50 [Arabidopsis thal...    37  0.12
UniRef100_Q9LIT3 Similar to Arabidopsis thaliana chromosome II B...    32  3.0
UniRef100_Q9ZPT2 Hypothetical protein At2g14070 [Arabidopsis tha...    32  3.9
UniRef100_UPI00002C3DBE UPI00002C3DBE UniRef100 entry                  32  5.1
UniRef100_UPI00003410CE UPI00003410CE UniRef100 entry                  31  6.7
UniRef100_Q7XQT0 OSJNBa0043L09.17 protein [Oryza sativa]               31  8.7

>UniRef100_Q04129 Wound induced protein [Lycopersicon esculentum]
          Length = 76

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 32/72 (44%), Positives = 44/72 (60%), Gaps = 3/72 (4%)

Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-NNITPNGNSSSAAAIPSKVKRSNQEFM 68
          VGAVEALKD++G+   R NY LRSL Q    N  + +     SS+    S+    ++E +
Sbjct: 7  VGAVEALKDQVGLC--RWNYPLRSLAQHTKNNVRSYSQAKKLSSSITTKSEKMEKSEESL 64

Query: 69 RKVMDLNCWGPS 80
          RKVM L+CWGP+
Sbjct: 65 RKVMYLSCWGPN 76


>UniRef100_O82615 T9A4.6 protein [Arabidopsis thaliana]
          Length = 90

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 10/86 (11%)

Query: 3  AATRSLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKR 62
          A T ++ +GAVEALKD+LG+   R NY LRS+ Q +  N      G   S++++ + V  
Sbjct: 7  AWTVAVSIGAVEALKDQLGLC--RWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTS 64

Query: 63 SNQ--------EFMRKVMDLNCWGPS 80
          S +        E +R VM L+CWGP+
Sbjct: 65 SGESEKAKKAEESLRTVMYLSCWGPN 90


>UniRef100_Q8GY66 Hypothetical protein [Arabidopsis thaliana]
          Length = 83

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 36/86 (41%), Positives = 53/86 (60%), Gaps = 9/86 (10%)

Query: 1  MSAATRSLIV----GAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAI 56
          MS+A+++ +V    GAVEALKD+LGV   R NY +RS  Q +  N          S+++I
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVC--RWNYVIRSANQYLRNNLRSVSQAKKLSSSSI 58

Query: 57 P--SKVKRSNQEFMRKVMDLNCWGPS 80
             +K K++ +E +R VM L+CWGPS
Sbjct: 59 DYTNKTKQA-EESLRTVMYLSCWGPS 83


>UniRef100_Q6ZBU1 Hypothetical protein P0577G06.2 [Oryza sativa]
          Length = 90

 Score = 50.4 bits (119), Expect = 1e-05
 Identities = 33/78 (42%), Positives = 47/78 (59%), Gaps = 4/78 (5%)

Query: 5  TRSLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS-SSAAAIPSKVKRS 63
          T ++ VGAVE LKD+ G+   R NYALRSL    +    +  +G + +S+ A     +R 
Sbjct: 15 TAAMSVGAVEGLKDQSGLC--RWNYALRSLHGAAMDTLMLQVHGGAGASSPAAAMAAERP 72

Query: 64 NQEFMRKVMDLN-CWGPS 80
           +E MR+VM L+ CWGPS
Sbjct: 73 EEEGMRRVMYLSCCWGPS 90


>UniRef100_Q7XQS4 OSJNBa0043L09.23 protein [Oryza sativa]
          Length = 87

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 7  SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS--SSAAAIPSKVKRSN 64
          ++ VGAVEALKD+ G+   R NYALRS+ +    N      G    +SAAA+  + +   
Sbjct: 12 AMSVGAVEALKDQGGLC--RWNYALRSIHKAAKANAAGVSQGKKLPASAAAVAERRRAEK 69

Query: 65 -QEFMRKVMDLNCWGPS 80
           +E +R VM L+CWGP+
Sbjct: 70 AEEGLRTVMYLSCWGPN 86


>UniRef100_Q655G5 Hypothetical protein P0009H10.12 [Oryza sativa]
          Length = 103

 Score = 47.4 bits (111), Expect = 9e-05
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 18/87 (20%)

Query: 10  VGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNG--------------NSSSAAA 55
           + AVEALKD+ G+   R +YALRSL QR      +T                 +SS AAA
Sbjct: 19  MSAVEALKDQAGLC--RWDYALRSLYQRAAAAKQVTGRAVPVSLSSQTGGAAASSSPAAA 76

Query: 56  I--PSKVKRSNQEFMRKVMDLNCWGPS 80
               ++ KRS +E M+K   L CWGP+
Sbjct: 77  CGRAARSKRSEEEKMQKAYHLVCWGPN 103


>UniRef100_Q7XQS9 OSJNBa0043L09.18 protein [Oryza sativa]
          Length = 97

 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 11/88 (12%)

Query: 2  SAATRSLIVGAVEALKDKLGVYNRRRNYALRSLQQR----VVKNNNITPNGNSS-----S 52
          S+   ++ VG VEALKD+ G+   R NYA R+LQQR     V   +   +G  +     +
Sbjct: 11 SSWAAAMSVGTVEALKDQAGLC--RWNYAFRTLQQRGRQQAVAGTSGAKSGGGARALQPA 68

Query: 53 AAAIPSKVKRSNQEFMRKVMDLNCWGPS 80
          AAA   +  +  +E +R VM L+ WGP+
Sbjct: 69 AAAAARRKAQQQEEELRTVMYLSNWGPN 96


>UniRef100_Q9SBR5 Putative wound-induced protein [Medicago varia]
          Length = 90

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 11/79 (13%)

Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGN----SSSAAAIPSKVK---- 61
          VG VEALKD+ G+   R N ALRS Q  V  +       N    S+S A + S++K    
Sbjct: 14 VGVVEALKDQ-GLC--RWNCALRSAQHHVKHHLRSLSQANKISSSNSYAMVSSRLKEQEA 70

Query: 62 RSNQEFMRKVMDLNCWGPS 80
          + ++E +R VM L+CWGP+
Sbjct: 71 KQSEESLRTVMYLSCWGPN 89


>UniRef100_Q7XQS2 OSJNBa0043L09.25 protein [Oryza sativa]
          Length = 86

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 29/74 (39%), Positives = 43/74 (57%), Gaps = 5/74 (6%)

Query: 7  SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS--SSAAAIPSKVKRSN 64
          ++ VGAVEALKD+ G+   R NYALRS+ +    N      G    +SAAA+  + +   
Sbjct: 12 AMSVGAVEALKDQGGLC--RWNYALRSIHKAAKANAAGVSQGKKLPASAAAVAERRRAEK 69

Query: 65 -QEFMRKVMDLNCW 77
           +E +R VM ++CW
Sbjct: 70 AEEGLRTVMYISCW 83


>UniRef100_Q7XQS3 OSJNBa0043L09.24 protein [Oryza sativa]
          Length = 87

 Score = 41.6 bits (96), Expect = 0.005
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)

Query: 7  SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS---SSAAAIPSKVKRS 63
          ++ VGAVEALKD+ G+   R NYALRS+ +    N     +      +SAAA+  + +  
Sbjct: 12 AMSVGAVEALKDQAGLC--RWNYALRSIHRAAKANARAGVSRGKKLPASAAAVAERRRAE 69

Query: 64 N-QEFMRKVMDLNCW 77
            +E +R VM ++CW
Sbjct: 70 KAEEGLRTVMYISCW 84


>UniRef100_UPI00003AAC8C UPI00003AAC8C UniRef100 entry
          Length = 370

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 25  RRRNYALRSL--QQRVVKNNNITPNGNSSSAAAIPSKVKRSNQEFMRKVMDLNCWGPSTT 82
           +R+   LR L  Q  ++K  + TP  NSS + A+PSK +R ++E M +  + N    +TT
Sbjct: 111 KRQQSVLRDLRPQMGLIKEGSGTPGTNSSLSRAVPSKAQREDKEKMSREQEFNRRTSNTT 170

Query: 83  K 83
           K
Sbjct: 171 K 171


>UniRef100_Q8LE02 Hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score = 38.5 bits (88), Expect = 0.042
 Identities = 30/84 (35%), Positives = 44/84 (51%), Gaps = 12/84 (14%)

Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-------NNITPNGNSSSAAAIPSKVKR 62
          + AVE LKD+ GV   R NY LR L +  +         +  +P  +SSSA +I SK   
Sbjct: 15 IAAVEVLKDQ-GV--ARWNYPLRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLS 71

Query: 63 SN--QEFMRKVMDLNCWGPSTTKF 84
          +   +    K M L+C+GP+T +F
Sbjct: 72 TTPFETSFEKAMGLSCFGPTTVRF 95


>UniRef100_O81873 Hypothetical protein T16L1.50 [Arabidopsis thaliana]
          Length = 95

 Score = 37.0 bits (84), Expect = 0.12
 Identities = 29/84 (34%), Positives = 43/84 (50%), Gaps = 12/84 (14%)

Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-------NNITPNGNSSSAAAIPSKVKR 62
          + AVE LKD+ GV   R NY  R L +  +         +  +P  +SSSA +I SK   
Sbjct: 15 IAAVEVLKDQ-GV--ARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLS 71

Query: 63 SN--QEFMRKVMDLNCWGPSTTKF 84
          +   +    K M L+C+GP+T +F
Sbjct: 72 TTPFETSFEKAMGLSCFGPTTVRF 95


>UniRef100_Q9LIT3 Similar to Arabidopsis thaliana chromosome II BAC F14M4 genomic
           sequence [Oryza sativa]
          Length = 732

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 13/47 (27%), Positives = 27/47 (56%)

Query: 20  LGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKRSNQE 66
           L  Y++R     +++Q + +KNN++ P+G++S    +PS      Q+
Sbjct: 490 LAQYSKRTENMHQAVQPQFLKNNSLIPSGSTSRPVHVPSSAGNERQD 536


>UniRef100_Q9ZPT2 Hypothetical protein At2g14070 [Arabidopsis thaliana]
          Length = 196

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 11/70 (15%)

Query: 26  RRNYALRSLQQ------RVVKNNNITPNGNSSSAAAIPSKVKRSN-----QEFMRKVMDL 74
           R NY LR   +      R +   +  P+  SSS+++    VK ++     +  M +VM L
Sbjct: 127 RWNYPLRFFNKDVRARLRAIAVTSRPPSSASSSSSSSADLVKENHPMPKSEASMERVMCL 186

Query: 75  NCWGPSTTKF 84
           +C+GP+T +F
Sbjct: 187 SCFGPTTVRF 196


>UniRef100_UPI00002C3DBE UPI00002C3DBE UniRef100 entry
          Length = 400

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 18/58 (31%), Positives = 25/58 (43%)

Query: 21  GVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKRSNQEFMRKVMDLNCWG 78
           G+Y  R      SL   V+ N+ I PNG S  +  + S +K      + KV    C G
Sbjct: 62  GIYYFRSYALFESLANDVLSNDQILPNGESYVSLLMNSAIKNHKNVLLFKVNKFICLG 119


>UniRef100_UPI00003410CE UPI00003410CE UniRef100 entry
          Length = 300

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 22/76 (28%), Positives = 40/76 (51%), Gaps = 7/76 (9%)

Query: 7   SLIVGAVEALKD--KLGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIP-----SK 59
           S+I+G +  +    K GV +R RN A   LQ+ + K N +   G  ++AAA       S 
Sbjct: 149 SIIIGLIFLIYFGIKFGVESRIRNKAYDKLQELMAKENELLSLGGQAAAAAHSLGTPLST 208

Query: 60  VKRSNQEFMRKVMDLN 75
           +  +++E  ++++D N
Sbjct: 209 ILLTSKELQKELVDNN 224


>UniRef100_Q7XQT0 OSJNBa0043L09.17 protein [Oryza sativa]
          Length = 90

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 54 AAIPSKVKRSNQEFMRKVMDLNCWGPS 80
          AA+  +++R  +E    VM L CWGPS
Sbjct: 64 AAVAERMRRRRREKSENVMQLVCWGPS 90


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.315    0.126    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,008,960
Number of Sequences: 2790947
Number of extensions: 3794683
Number of successful extensions: 13832
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 13817
Number of HSP's gapped (non-prelim): 18
length of query: 84
length of database: 848,049,833
effective HSP length: 60
effective length of query: 24
effective length of database: 680,593,013
effective search space: 16334232312
effective search space used: 16334232312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)


Lotus: description of TM0590c.4