BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0365.13
(1615 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FZK7 F17L21.7 [Arabidopsis thaliana] 836 0.0
UniRef100_Q94HW2 Polyprotein, putative [Arabidopsis thaliana] 832 0.0
UniRef100_Q9SXQ1 Polyprotein [Arabidopsis thaliana] 831 0.0
UniRef100_Q94HW7 Polyprotein, putative [Arabidopsis thaliana] 831 0.0
UniRef100_Q9SXQ3 Polyprotein [Arabidopsis thaliana] 827 0.0
UniRef100_O24438 Retrofit [Oryza longistaminata] 825 0.0
UniRef100_Q6F356 Putative polyprotein [Oryza sativa] 767 0.0
UniRef100_Q9SSB1 T18A20.5 protein [Arabidopsis thaliana] 746 0.0
UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa] 730 0.0
UniRef100_Q9SA17 F28K20.17 protein [Arabidopsis thaliana] 725 0.0
UniRef100_O81824 Hypothetical protein AT4g27210 [Arabidopsis tha... 707 0.0
UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana] 706 0.0
UniRef100_Q94IU9 Copia-like polyprotein [Arabidopsis thaliana] 706 0.0
UniRef100_Q8S1E5 Putative gag/pol polyprotein [Oryza sativa] 699 0.0
UniRef100_Q9SLL4 Putative retroelement pol polyprotein [Arabidop... 691 0.0
UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides] 679 0.0
UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa] 678 0.0
UniRef100_Q9SXF0 T3P18.3 [Arabidopsis thaliana] 663 0.0
UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis ... 660 0.0
UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidop... 626 e-177
>UniRef100_Q9FZK7 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 836 bits (2159), Expect = 0.0
Identities = 488/1200 (40%), Positives = 673/1200 (55%), Gaps = 128/1200 (10%)
Query: 462 STGMHPQAMLATVPAHHSSPVT---WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNG 518
S +P A + P + + ++ W DSGATHH+T + H P + E++ + +G
Sbjct: 399 SPSQYPNATVPWQPRANMAAMSYNPWLLDSGATHHLTTDLNNLALHQPYNGGEEVTIADG 458
Query: 519 QGLPIQSIGSALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCS 578
LPI GS+ L + + SL L +L VP++ KNL+SV + N V F H
Sbjct: 459 STLPITHTGSSTLSTQ---SRSLALNNILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQ 515
Query: 579 VHHQDTYELLLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAI 638
V T LL G D+ LY + P S++P+S ASP
Sbjct: 516 VKDLSTGARLLQGRTKDE-LYEWPVP---------SNTPISLF------------ASP-- 551
Query: 639 DLQSATVSPIVPSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLK 698
T +PS WHSRLGHP VLK
Sbjct: 552 -----TPKTTLPS---------------------------------WHSRLGHPSPPVLK 573
Query: 699 QTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESS 758
+S ++ V ++ C C ++K H+LP S+ + TP E V++D+W + + S
Sbjct: 574 SLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIISYTPLEYVYSDVW-TSPVTSV 632
Query: 759 CGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKP 818
F Y+L VD T+YTW++PLK+KS TF+ F+A+VE +F K++++ +D GGEF
Sbjct: 633 DNFKYYLILVDHYTRYTWLYPLKQKSQVRETFVAFKALVENRFQTKIRTLYSDNGGEFIA 692
Query: 819 LTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATY 878
L GI H + PHT NG ERKHRHI+ETGL LL+ AS+P +W +AF A Y
Sbjct: 693 LRQFLLTHGISHLTSLPHTPEHNGIAERKHRHILETGLTLLTQASIPTSYWTYAFGTAVY 752
Query: 879 LINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGY 938
LINR+ ++ L SPY KL+ P++ L+VFG +CFP+LRPY ++KL S+ CVF+GY
Sbjct: 753 LINRLPSSVLNNESPYSKLFKTSPNYLKLRVFGCSCFPWLRPYTNHKLERRSQPCVFLGY 812
Query: 939 SINHKGYKCLDQ-SGRIYISKDVLFHEHRFPYPILFPTDHSSSSSAE-----FYPLSTIP 992
S+ Y CLD+ SGR+Y S+ V F E +FP+ I S+SS E P S IP
Sbjct: 813 SLTQSAYLCLDRSSGRVYTSRHVQFVEDQFPFSISDTHSVSNSSPEEASPSCHQPPSRIP 872
Query: 993 IISHT-----APPSSPVLAASGHSSP-------------------------------GPQ 1016
I S + AP S P L++ H P GP
Sbjct: 873 IQSSSPPLVQAPSSLPPLSSDSHRRPNAETSSSSSSTNNDVVVSKDNTQVDNRNNFIGPT 932
Query: 1017 DSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTSASVVAAA------PPVIVN 1070
S Q ++ S+ + + P P P +S+ + S+S A + PP N
Sbjct: 933 SSSSAQSQNNSNPSSSIQTQNEPNPSPSPTPQNSSPESSPSSSTSATSTVPNPPPPPPTN 992
Query: 1071 THPMQTRAKNGIVKPRLQPTLLLTHLE-----PTSVKQAMKDVKWYKAMQEEYTALMNNG 1125
HPM+TRAKN I KP+ + +LL ++ P +V QA++D KW AM EE A + N
Sbjct: 993 NHPMRTRAKNHITKPKTKLSLLAKTVQTRPQIPNTVNQALRDEKWRNAMGEEINAQIRNN 1052
Query: 1126 TWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKP 1185
T+ LVP N+ + KWI+ +K P+G++++YKARLVA+G+ Q G YSETFSPVVK
Sbjct: 1053 TFELVPPKPNQNVISTKWIFTLKYLPNGTLDRYKARLVARGFRQQYGLHYSETFSPVVKS 1112
Query: 1186 ITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVCKLQKALY 1244
+T+RL+L LA+SR W ++QLDVNNAFL G L +EVY+ QPPGF D+ + VC+L+KALY
Sbjct: 1113 LTIRLVLQLAVSRSWTIKQLDVNNAFLQGTLTDEVYVTQPPGFIDPDRPHHVCRLKKALY 1172
Query: 1245 GLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLI 1304
GLKQAPRAW+ L+ + GF S D S+F Y + +Y LVYVDDII+TG+S +L+
Sbjct: 1173 GLKQAPRAWYQELRNFVCSLGFTNSLADTSVFVYINDIQIVYCLVYVDDIIVTGSSDALV 1232
Query: 1305 QQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAIST 1364
L F+LK L YFLG++ T S G L L Q KY+ DLL+++ MLDA +ST
Sbjct: 1233 MAFITALSRRFSLKDPTDLVYFLGIEATRTSQG-LHLMQHKYVYDLLSRMKMLDAKPVST 1291
Query: 1365 PMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKA 1424
PM KLS G AL +P EYR+V+G+LQY TRP+I++AVN++ QFM +P + HW+A
Sbjct: 1292 PMATHPKLSLYSGIALDEPGEYRTVIGSLQYLAFTRPDIAYAVNRLSQFMHRPTDIHWQA 1351
Query: 1425 VKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLIS 1484
KR+LRYL GT THGILL+ S PL L A+ DADW D DD ST+ V+LG I+
Sbjct: 1352 AKRVLRYLAGTATHGILLRSNS---PLSLHAFSDADWAGDNDDFVSTNAYIVYLGSTPIA 1408
Query: 1485 WTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPTVYCDNMSTVILTH 1543
W++KKQ VARSSTEAEYR++ANTT+E+ WV SLLTEL I +P +YCDN+ L+
Sbjct: 1409 WSSKKQKGVARSSTEAEYRAVANTTSEIRWVCSLLTELGITLPKMPVIYCDNVGATYLSA 1468
Query: 1544 NPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNV 1603
NP+ H+R KH+ +D F+R+ V +L V H+ + Q AD TK L FL K+ V
Sbjct: 1469 NPVFHSRMKHLALDYHFIRDNVSAGALRVSHISTHDQLADALTKPLPRQHFLQFSSKIGV 1528
Score = 115 bits (288), Expect = 1e-23
Identities = 85/357 (23%), Positives = 159/357 (43%), Gaps = 54/357 (15%)
Query: 6 SSPSMPSSSSSSSLSQAFSHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEK 65
+S ++ +S S+S L+ ++ KL SNF W++QV+ ++ + L ++ ++P
Sbjct: 104 ASETVITSDSTSLLNVNMTNVT--KLTSSNFLMWRRQVQALLNGYDLTGYIDGSIVVPPA 161
Query: 66 FLTEEDKITENVNPLFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFN 125
+T +T VNP F W++QD L+++ LL +S ++ P + + S ++W ++ +
Sbjct: 162 TITANGAVT--VNPAFKHWQRQDQLIYSALLGAISISVQPILSRTTTSAEIWTKLMDTYA 219
Query: 126 AKSRAQSTQLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSE 185
S + QLR ++K K TK+ EF Q + + LA +G+P+ + +E I +GLS+
Sbjct: 220 KPSWSHIQQLRQQIKQWKKDTKSIDEFFQGLVMRFDQLALLGKPMESEEQMEVIVEGLSD 279
Query: 186 EYSALMTVIYNQTTYFTISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSST 245
+Y ++ I + +++E+ +++HE + A A + P S+
Sbjct: 280 DYKQVIDQIQGREVPPSLTEIHEKLLNHEVKLQ----------------AAASSLPISAN 323
Query: 246 APAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRG 305
A + PP + + + + NR+ NR + Y +
Sbjct: 324 AASYRPP------------------------ANNKHNNSNNYRGQNRNNNNRGANSYQQP 359
Query: 306 RG---RGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVP 359
R RG +C C +GH A C S S A S S + N +VP
Sbjct: 360 RNDQPSSRGYQGKCQICGVFGHSARRC-------SQLQMSGAYSTPSPSQYPNATVP 409
>UniRef100_Q94HW2 Polyprotein, putative [Arabidopsis thaliana]
Length = 1466
Score = 832 bits (2150), Expect = 0.0
Identities = 512/1268 (40%), Positives = 692/1268 (54%), Gaps = 161/1268 (12%)
Query: 416 PYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPRPPQQQVSTGMHPQAMLATVP 475
PY + G+Q G S R Q + +Q P P P Q P+A LA
Sbjct: 274 PYLGKCQICGVQ--GHSAKRCSQLQHFLSSVNSQQPPSPFTPWQ-------PRANLALGS 324
Query: 476 AHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSF 535
+ S+ W DSGATHH+T++ H P + + ++V +G +PI GS L +
Sbjct: 325 PYSSN--NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS 382
Query: 536 NPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGD 595
P L L +L VP+I KNL+SV R N V F V +T LL G D
Sbjct: 383 RP---LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 439
Query: 596 DGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPIVPSLVPC 655
+ ++ P+ SS P+S ASP
Sbjct: 440 E---LYEWPIA-------SSQPVSLF------------ASP------------------- 458
Query: 656 NNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVF 715
S + + WH+RLGHP +L +S ++SV + F
Sbjct: 459 ---------------------SSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKF 497
Query: 716 SFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYT 775
C C ++K +++P S S P E +++D+W L S + Y++ VD T+YT
Sbjct: 498 LSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPIL-SHDNYRYYVIFVDHFTRYT 556
Query: 776 WVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKLGIIHRLTCP 835
W++PLK+KS TFI F+ ++E +F ++ + +D GGEF L +F + GI H + P
Sbjct: 557 WLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPP 616
Query: 836 HTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYF 895
HT NG ERKHRHIVETGL LLSHAS+P +W +AF A YLINR+ T LQ SP+
Sbjct: 617 HTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 676
Query: 896 KLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLD-QSGRI 954
KL+G P++ L+VFG AC+P+LRPYN +KL S++CVF+GYS+ Y CL Q+ R+
Sbjct: 677 KLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRL 736
Query: 955 YISKDVLFHEHRFPYPILFPT-----DHSSSSSAEFYPLSTIPIIS------------HT 997
YIS+ V F E+ FP+ T + SS + P +T+P + H
Sbjct: 737 YISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHA 796
Query: 998 A-PPSSP----------------VLAASGHSSP--------GPQDSPQQQQPPSATLSAD 1032
A PPSSP ++S SSP GPQ + Q Q + T S+
Sbjct: 797 ATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQ 856
Query: 1033 DPSTSTPAVVSP-----------------PVPSSSAQSADTS---ASVVAAAPPVI---- 1068
+ S + P SP P P++SA S+ TS S++ PP +
Sbjct: 857 NTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIV 916
Query: 1069 -------VNTHPMQTRAKNGIVKPRLQPTL---LLTHLEPTSVKQAMKDVKWYKAMQEEY 1118
+NTH M TRAK GI+KP + +L L EP + QA+KD +W AM E
Sbjct: 917 NNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEI 976
Query: 1119 TALMNNGTWTLVPLPANR-TPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSE 1177
A + N TW LVP P + T VGC+WI+ K N DGS+N+YKARLVAKGY+Q G DY+E
Sbjct: 977 NAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAE 1036
Query: 1178 TFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLV 1236
TFSPV+K ++R++L +A+ R WP++QLDVNNAFL G L ++VYM QPPGF KD+ N V
Sbjct: 1037 TFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYV 1096
Query: 1237 CKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIII 1296
CKL+KALYGLKQAPRAW+ L+ L+ GF S D SLF + +YMLVYVDDI+I
Sbjct: 1097 CKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILI 1156
Query: 1297 TGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNM 1356
TG +L+ L F++K +L YFLG++ + G L L+Q +YI DLL + NM
Sbjct: 1157 TGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-LHLSQRRYILDLLARTNM 1215
Query: 1357 LDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQ 1416
+ A ++TPM KLS G+ L DPTEYR +VG+LQY TRP+IS+AVN++ QFM
Sbjct: 1216 ITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHM 1275
Query: 1417 PHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCV 1476
P EEH +A+KRILRYL GT HGI L+ L L AY DADW D DD ST+G V
Sbjct: 1276 PTEEHLQALKRILRYLAGTPNHGIFLK---KGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332
Query: 1477 FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFT-IPTVYCDN 1535
+LG++ ISW++KKQ V RSSTEAEYRS+ANT++E+ W+ SLLTEL I T P +YCDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392
Query: 1536 MSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFL 1595
+ L NP+ H+R KH+ +D F+R +VQ +L V HV + Q AD TK LS T F
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452
Query: 1596 LLKDKLNV 1603
K+ V
Sbjct: 1453 NFASKIGV 1460
Score = 107 bits (266), Expect = 4e-21
Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 30 KLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDS 89
KL +N+ W +QV + ++L F+ +P + + VNP + W++QD
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTD--AAPRVNPDYTRWKRQDK 82
Query: 90 LLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKGTKTA 149
L+++ +L +S ++ P V + + Q+WE + + S TQLR +LK TKGTKT
Sbjct: 83 LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 142
Query: 150 SEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAM 209
+++Q + T + LA +G+P+ + +E + + L EEY ++ I + T T++E+
Sbjct: 143 DDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHER 202
Query: 210 VISHEAR 216
+++HE++
Sbjct: 203 LLNHESK 209
>UniRef100_Q9SXQ1 Polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 831 bits (2146), Expect = 0.0
Identities = 511/1268 (40%), Positives = 690/1268 (54%), Gaps = 161/1268 (12%)
Query: 416 PYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPRPPQQQVSTGMHPQAMLATVP 475
PY + G+Q G S R Q + +Q P P P Q P+A LA
Sbjct: 239 PYLGKCQICGVQ--GHSAKRCSQLQHFLSSVNSQQPPSPFTPWQ-------PRANLALGS 289
Query: 476 AHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSF 535
+ S+ W DSGATHH+T++ H P + + ++V +G +PI GS L +
Sbjct: 290 PYSSN--NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS 347
Query: 536 NPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGD 595
P L L +L VP+I KNL+SV R N V F V +T LL G D
Sbjct: 348 RP---LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 404
Query: 596 DGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPIVPSLVPC 655
+ ++ P+ SS P+S ASP
Sbjct: 405 E---LYEWPIA-------SSQPVSLF------------ASP------------------- 423
Query: 656 NNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVF 715
S + + WH+RLGHP +L +S ++SV + F
Sbjct: 424 ---------------------SSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKF 462
Query: 716 SFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYT 775
C C ++K +++P S S P E +++D+W L S + Y++ VD T+YT
Sbjct: 463 LSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPIL-SHDNYRYYVIFVDHFTRYT 521
Query: 776 WVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKLGIIHRLTCP 835
W++PLK+KS TFI F+ ++E +F ++ + +D GGEF L +F + GI H + P
Sbjct: 522 WLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPP 581
Query: 836 HTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYF 895
HT NG ERKHRHIVETGL LLSHAS+P +W +AF A YLINR+ T LQ SP+
Sbjct: 582 HTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 641
Query: 896 KLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLD-QSGRI 954
KL+G P++ L+VFG AC+P+LRPYN +KL S++CVF+GYS+ Y CL Q+ R+
Sbjct: 642 KLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRL 701
Query: 955 YISKDVLFHEHRFPYPILFPT-----DHSSSSSAEFYPLSTIPIIS------------HT 997
YIS+ V F E+ FP+ T + SS + P +T+P + H
Sbjct: 702 YISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPGLPAPSGSDPHHA 761
Query: 998 A-PPSSP----------------VLAASGHSSP--------GPQDSPQQQQPPSATLSAD 1032
A PPSSP ++S SSP GPQ Q Q + T S+
Sbjct: 762 ATPPSSPSAPFRNSQVSSSNRESYFSSSFPSSPEPTAPRQNGPQPKTQPTQTQTQTHSSQ 821
Query: 1033 DPSTSTPAVVSP-----------------PVPSSSAQSADTS---ASVVAAAPPVI---- 1068
+ S + P SP P P++SA S+ TS S++ PP +
Sbjct: 822 NTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIV 881
Query: 1069 -------VNTHPMQTRAKNGIVKPRLQPTL---LLTHLEPTSVKQAMKDVKWYKAMQEEY 1118
+NTH M TRAK GI+KP + +L L EP + QA+KD +W AM E
Sbjct: 882 NNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEI 941
Query: 1119 TALMNNGTWTLVPLPANR-TPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSE 1177
A + N TW LVP P + T VGC+WI+ K N DGS+N+YKAR VAKGY+Q G DY+E
Sbjct: 942 NAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARFVAKGYNQRPGLDYAE 1001
Query: 1178 TFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLV 1236
TFSPV+K ++R++L +A+ R WP++QLDVNNAFL G L ++VYM QPPGF KD+ N V
Sbjct: 1002 TFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYV 1061
Query: 1237 CKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIII 1296
CKL+KALYGLKQAPRAW+ L+ L+ GF S D SLF + +YMLVYVDDI+I
Sbjct: 1062 CKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILI 1121
Query: 1297 TGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNM 1356
TG +L+ L F++K +L YFLG++ + G L L+Q +YI DLL + NM
Sbjct: 1122 TGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-LHLSQRRYILDLLARTNM 1180
Query: 1357 LDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQ 1416
+ A ++TPM KLS G+ L DPTEYR +VG+LQY TRP+IS+AVN++ QFM
Sbjct: 1181 ITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHM 1240
Query: 1417 PHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCV 1476
P EEH +A+KRILRYL GT HGI L+ L L AY DADW D DD ST+G V
Sbjct: 1241 PTEEHLQALKRILRYLAGTPNHGIFLK---KGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1297
Query: 1477 FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFT-IPTVYCDN 1535
+LG++ ISW++KKQ V RSSTEAEYRS+ANT++E+ W+ SLLTEL I T P +YCDN
Sbjct: 1298 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1357
Query: 1536 MSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFL 1595
+ L NP+ H+R KH+ +D F+R +VQ +L V HV + Q AD TK LS T F
Sbjct: 1358 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1417
Query: 1596 LLKDKLNV 1603
K+ V
Sbjct: 1418 NFASKIGV 1425
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/84 (34%), Positives = 53/84 (62%)
Query: 133 TQLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMT 192
TQLR +LK TKGTKT +++Q + T + LA +G+P+ + +E + + L EEY ++
Sbjct: 91 TQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVID 150
Query: 193 VIYNQTTYFTISEVEAMVISHEAR 216
I + T T++E+ +++HE++
Sbjct: 151 QIAAKDTPPTLTEIHERLLNHESK 174
>UniRef100_Q94HW7 Polyprotein, putative [Arabidopsis thaliana]
Length = 1466
Score = 831 bits (2146), Expect = 0.0
Identities = 511/1268 (40%), Positives = 691/1268 (54%), Gaps = 161/1268 (12%)
Query: 416 PYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPRPPQQQVSTGMHPQAMLATVP 475
PY + G+Q G S R Q + +Q P P P Q P+A LA
Sbjct: 274 PYLGKCQICGVQ--GHSAKRCSQLQHFLSSVNSQQPPSPFTPWQ-------PRANLALGS 324
Query: 476 AHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSF 535
+ S+ W DSGATHH+T++ H P + + ++V +G +PI GS L +
Sbjct: 325 PYSSN--NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKS 382
Query: 536 NPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGD 595
P L L +L VP+I KNL+SV R N V F V +T LL G D
Sbjct: 383 RP---LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 439
Query: 596 DGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPIVPSLVPC 655
+ ++ P+ SS P+S ASP
Sbjct: 440 E---LYEWPIA-------SSQPVSLF------------ASP------------------- 458
Query: 656 NNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVF 715
S + + WH+RLGHP +L +S ++SV + F
Sbjct: 459 ---------------------SSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKF 497
Query: 716 SFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYT 775
C C ++K +++P S S P E +++D+W L S + Y++ VD T+YT
Sbjct: 498 LSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPIL-SHDNYRYYVIFVDHFTRYT 556
Query: 776 WVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKLGIIHRLTCP 835
W++PLK+KS TFI F+ ++E +F ++ + +D GGEF L +F + GI H + P
Sbjct: 557 WLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPP 616
Query: 836 HTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYF 895
HT NG ERKHRHIVETGL LLSHAS+P +W +AF A YLINR+ T LQ SP+
Sbjct: 617 HTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 676
Query: 896 KLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLD-QSGRI 954
KL+G P++ L+VFG AC+P+LRPYN +KL S++CVF+GYS+ Y CL Q+ R+
Sbjct: 677 KLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRL 736
Query: 955 YISKDVLFHEHRFPYPILFPT-----DHSSSSSAEFYPLSTIPIIS------------HT 997
YIS+ V F E+ FP+ T + SS + P +T+P + H
Sbjct: 737 YISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHA 796
Query: 998 A-PPSSP----------------VLAASGHSSP--------GPQDSPQQQQPPSATLSAD 1032
A PPSSP ++S SSP GPQ + Q Q + T S+
Sbjct: 797 ATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQ 856
Query: 1033 DPSTSTPAVVSP-----------------PVPSSSAQSADTS---ASVVAAAPPVI---- 1068
+ S + P SP P P++SA S+ TS S++ PP +
Sbjct: 857 NTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIV 916
Query: 1069 -------VNTHPMQTRAKNGIVKPRLQPTL---LLTHLEPTSVKQAMKDVKWYKAMQEEY 1118
+NTH M TRAK GI+KP + +L L EP + QA+KD +W AM E
Sbjct: 917 NNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEI 976
Query: 1119 TALMNNGTWTLVPLPANR-TPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSE 1177
A + N TW LVP P + T VGC+WI+ K N DGS+N+YKAR VAKGY+Q G DY+E
Sbjct: 977 NAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARFVAKGYNQRPGLDYAE 1036
Query: 1178 TFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLV 1236
TFSPV+K ++R++L +A+ R WP++QLDVNNAFL G L ++VYM QPPGF KD+ N V
Sbjct: 1037 TFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYV 1096
Query: 1237 CKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIII 1296
CKL+KALYGLKQAPRAW+ L+ L+ GF S D SLF + +YMLVYVDDI+I
Sbjct: 1097 CKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILI 1156
Query: 1297 TGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNM 1356
TG +L+ L F++K +L YFLG++ + G L L+Q +YI DLL + NM
Sbjct: 1157 TGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-LHLSQRRYILDLLARTNM 1215
Query: 1357 LDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQ 1416
+ A ++TPM KLS G+ L DPTEYR +VG+LQY TRP+IS+AVN++ QFM
Sbjct: 1216 ITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHM 1275
Query: 1417 PHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCV 1476
P EEH +A+KRILRYL GT HGI L+ L L AY DADW D DD ST+G V
Sbjct: 1276 PTEEHLQALKRILRYLAGTPNHGIFLK---KGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332
Query: 1477 FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFT-IPTVYCDN 1535
+LG++ ISW++KKQ V RSSTEAEYRS+ANT++E+ W+ SLLTEL I T P +YCDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392
Query: 1536 MSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFL 1595
+ L NP+ H+R KH+ +D F+R +VQ +L V HV + Q AD TK LS T F
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452
Query: 1596 LLKDKLNV 1603
K+ V
Sbjct: 1453 NFASKIGV 1460
Score = 107 bits (266), Expect = 4e-21
Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 30 KLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDS 89
KL +N+ W +QV + ++L F+ +P + + VNP + W++QD
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTD--AAPRVNPDYTRWKRQDK 82
Query: 90 LLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKGTKTA 149
L+++ +L +S ++ P V + + Q+WE + + S TQLR +LK TKGTKT
Sbjct: 83 LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTI 142
Query: 150 SEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAM 209
+++Q + T + LA +G+P+ + +E + + L EEY ++ I + T T++E+
Sbjct: 143 DDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHER 202
Query: 210 VISHEAR 216
+++HE++
Sbjct: 203 LLNHESK 209
>UniRef100_Q9SXQ3 Polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 827 bits (2136), Expect = 0.0
Identities = 501/1217 (41%), Positives = 674/1217 (55%), Gaps = 152/1217 (12%)
Query: 467 PQAMLATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSI 526
P+A LA + S+ +W DSGATHH+T++ H P + + ++V +G +PI
Sbjct: 297 PRANLALGSPYSSN--SWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVVDGSTIPISHT 354
Query: 527 GSALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYE 586
GS L + P L L +L VP+I KNL+SV R N V F V +T
Sbjct: 355 GSTSLSTKSRP---LNLHNILYVPNIHKNLISVYRLCNANGVSVEFFLASFQVKDLNTGV 411
Query: 587 LLLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVS 646
LL G D+ ++ P+ SS P+S ASP
Sbjct: 412 PLLQGKTKDE---LYEWPIA-------SSQPVSLF------------ASP---------- 439
Query: 647 PIVPSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNI 706
S + + WH+RLGHP +L +S ++
Sbjct: 440 ------------------------------SSKATHSSWHARLGHPAPSILNSVISNYSL 469
Query: 707 SVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLT 766
SV + F C ++K +++P S S P E +++D+W L S + Y++
Sbjct: 470 SVLNPSHKFLSCLDSLINKSNKVPFSQSTINSTRPLEYIYSDVWSSPIL-SHDNYRYYVI 528
Query: 767 CVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKL 826
VD T+YTW++PLK+KS TFI F+ +VE +F ++ + +D GGEF L +F +
Sbjct: 529 FVDHFTRYTWLYPLKQKSQVKETFITFKNLVENRFQTRIGTFYSDNGGEFVALREYFSQH 588
Query: 827 GIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTT 886
GI H + PHT NG ERKHRHIVETGL LLSHAS+P +W +AF A YLINR+ T
Sbjct: 589 GISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTP 648
Query: 887 TLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYK 946
LQ SP KL+G P++ L+VFG AC+P+LRPYN +KL S++CVF+GYS+ Y
Sbjct: 649 LLQLESPCQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYL 708
Query: 947 CLD-QSGRIYISKDVLFHEHRFPYPILFPT-----DHSSSSSAEFYPLSTIPIIS----- 995
CL Q+ RIYIS+ V F E+ FP+ T + SS + P +T+P +
Sbjct: 709 CLHLQTSRIYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPA 768
Query: 996 -------HTA-PPSSP----------------VLAASGHSSP--------GPQDSPQQQQ 1023
H A PPSSP ++S SSP GPQ + Q Q
Sbjct: 769 PSCSDPHHAATPPSSPSAPSRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQ 828
Query: 1024 PPSATLSADDPSTSTPAVVSP-----------------PVPSSSAQSADTS---ASVVAA 1063
+ T S+ + S + P SP P P++SA S+ TS S++
Sbjct: 829 TQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIH 888
Query: 1064 APPVI-----------VNTHPMQTRAKNGIVKPRLQPTL---LLTHLEPTSVKQAMKDVK 1109
PP + +NTH M TRAK GI+KP L+ +L L EP + QA+KD +
Sbjct: 889 PPPPLAQIVNNNNQAPINTHSMGTRAKAGIIKPNLKYSLAVSLAAESEPRTAIQALKDER 948
Query: 1110 WYKAMQEEYTALMNNGTWTLVPLPANR-TPVGCKWIYRIKENPDGSINKYKARLVAKGYS 1168
W AM E A + N TW LVP P + T VGC+WI+ K N DGS+N+YKARLVAKGY+
Sbjct: 949 WRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYN 1008
Query: 1169 QVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGF 1228
Q G DY ETFSPV+K ++R++L +A+ R WP++QLDVNNAFL G L ++VYM QPPGF
Sbjct: 1009 QRPGLDYVETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGF 1068
Query: 1229 EHKDK-NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYM 1287
KD+ N VCKL+KALYGLKQAPRAW+ L+ L+ GF S D SLF + +YM
Sbjct: 1069 IDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYM 1128
Query: 1288 LVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYI 1347
LVYVDDI+ITG +L+ L F++K +L YFLG++ + G L L+Q +YI
Sbjct: 1129 LVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-LHLSQRRYI 1187
Query: 1348 SDLLTKVNMLDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAV 1407
DLL + NM+ A ++TPM KLS G+ L DPTEYR +VG+LQY TRP+IS+AV
Sbjct: 1188 LDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAV 1247
Query: 1408 NKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDD 1467
N++ QFM P EEH +A+KRILRYL GT HGI L+ L L AY DADW D DD
Sbjct: 1248 NRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK---KGNTLSLHAYSDADWTGDKDD 1304
Query: 1468 RRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFT 1527
ST+G V+LG++ ISW++KKQ V RSSTEAEYRS+ANT++E+ W+ SLLTEL I T
Sbjct: 1305 YVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLT 1364
Query: 1528 -IPTVYCDNMSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFT 1586
P +YCDN+ L NP+ H+R KH+ +D F+R +VQ +L V HV + Q AD T
Sbjct: 1365 RPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLT 1424
Query: 1587 KALSPTRFLLLKDKLNV 1603
K LS T F K+ V
Sbjct: 1425 KPLSRTAFQNFASKIGV 1441
Score = 101 bits (252), Expect = 2e-19
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 30 KLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFADWEQQDS 89
KL +N+ W +QV + ++L F+ +P + + VNP + W++QD
Sbjct: 6 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTD--AAPRVNPDYTRWKRQDK 63
Query: 90 LLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKGTKTA 149
L+++ +L +S ++ P V + + Q+WE + + S TQ R +LK TKGTKT
Sbjct: 64 LIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQFRTQLKQWTKGTKTI 123
Query: 150 SEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYFTISEVEAM 209
+++Q T + LA +G+P+ + +E + + L EEY ++ I + T T++E+
Sbjct: 124 DDYMQGFVTHFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHER 183
Query: 210 VISHEAR 216
+++ E++
Sbjct: 184 LLNQESK 190
>UniRef100_O24438 Retrofit [Oryza longistaminata]
Length = 1445
Score = 825 bits (2131), Expect = 0.0
Identities = 492/1208 (40%), Positives = 683/1208 (55%), Gaps = 142/1208 (11%)
Query: 468 QAMLATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIG 527
+ ++A + W D+GAT H+T + EQ+ +G G+ I IG
Sbjct: 305 EKLVAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIG 364
Query: 528 SALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYEL 587
++ + P+ ++ L +L VP KNL+S S+ A DN+ F H+ S+ Q T ++
Sbjct: 365 HTIVHT---PSRNIHLNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDV 421
Query: 588 LLTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSP 647
LL G GLY P+ K + + L + + L S+ + P++ P
Sbjct: 422 LLEGKC-RHGLY----PIPKFFGRSTNKQALGAAKLSL-SRWHSRLGHPSL--------P 467
Query: 648 IVPSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNIS 707
IV ++ NN C++
Sbjct: 468 IVKQVISRNNLP--------------------------------------------CSVE 483
Query: 708 VPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTC 767
N+SV C AC +K H+LP S +V P ELVF+D+WGPA ES Y+++
Sbjct: 484 -SVNQSV---CNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSF 538
Query: 768 VDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTD-GGGEFKPLTSHFQKL 826
+D +K+TW++ LK KS+ F FQA+VE F K+ ++QTD GG ++ L S F ++
Sbjct: 539 IDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWRGGRYQKLNSFFAQI 598
Query: 827 GIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTT 886
G+I QNGS ERKHRHIVE GL+LLS+ASMPL+FWD AF+AATYLINR+ +
Sbjct: 599 GLIIMCHVLTLIRQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSK 658
Query: 887 TLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYK 946
T+Q ++P KL+ Q PD+ SL+VFG AC+P LRPYN++KL SK+CVF+G+S +HKG+K
Sbjct: 659 TIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFK 718
Query: 947 CLD-QSGRIYISKDVLFHEHRFPYP--------------ILFPTDHSSSSSAEFYPLSTI 991
CLD SGR+YIS+DV+F E+ FP+ +L P+ ++ ++A +
Sbjct: 719 CLDVSSGRVYISRDVVFDENVFPFSTLHSNAGARLRSEILLLPSPLTNYNTASAGGTHVV 778
Query: 992 PIISHTAPPSSPVLA-----ASGHSSPGPQDSPQQQQPPSATLSADD---PSTSTPAVVS 1043
+++T PS +++ SG +S + + +Q + +D + S P +
Sbjct: 779 APVANTPLPSDNLISNAADVTSGENSAAHEQEMENEQEIENVMHGNDVHGDAASGPVLDQ 838
Query: 1044 PPVPSSSA--QSADTSASVVAAAPPVIVNTHPMQTRAKNGI---------VKPRLQPTLL 1092
P SS+A Q ADTS +V AA +T + A N V+P + T+L
Sbjct: 839 PTADSSTAPDQGADTSDAVSGAASDAGGDTATLGAGAANSAAAGGEESQPVQPDVTGTVL 898
Query: 1093 LTHL---------------------------------EPTSVKQAMKDVKWYKAMQEEYT 1119
T EP + K+A+ D W AM+ EY
Sbjct: 899 ATVAPASRPHTRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETEYN 958
Query: 1120 ALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETF 1179
AL+ N TW LVP + +GCKW+Y+IK DG++++YKARLVAKG+ Q G DY +TF
Sbjct: 959 ALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTF 1018
Query: 1180 SPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVCK 1238
SPVVK T+R+ILS+A+SRGW L+QLDV NAFL+G LEEEVYM QPPGFE K + VCK
Sbjct: 1019 SPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCK 1078
Query: 1239 LQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITG 1298
L KALYGLKQAPRAW+ RL + L+ GF+ASK D SLF +++LVYVDDII+
Sbjct: 1079 LDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVAS 1138
Query: 1299 ASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLD 1358
++ L L+ FALK LG L YFLG++VT +SNG ++L Q KY +DLL +VNM +
Sbjct: 1139 STEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNG-VILTQEKYANDLLKRVNMSN 1197
Query: 1359 AAAISTPMQCGVKLSKNEGSAL--KDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQ 1416
+STP+ KL+ EGS L D +YRS+VGALQY T+TRP+I+++VNKVCQF+
Sbjct: 1198 CKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHA 1257
Query: 1417 PHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCV 1476
P HW AVKRILRYL + G+ + + T + Y DADW DDR+ST G V
Sbjct: 1258 PTTSHWIAVKRILRYLNQCTSLGLHIHKSASTL---VHGYSDADWAGSIDDRKSTGGFAV 1314
Query: 1477 FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPTVYCDN 1535
FLG NL+SW+A+KQ V+RSSTEAEY+++ANTTAEL+WVQ+LL EL I ++CDN
Sbjct: 1315 FLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDN 1374
Query: 1536 MSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFL 1595
+ L+ NP+ H RTKH+E+D FVRE+V K L + VPS Q AD FTKALS
Sbjct: 1375 LGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSACLLE 1434
Query: 1596 LLKDKLNV 1603
K LN+
Sbjct: 1435 NFKHNLNL 1442
Score = 127 bits (320), Expect = 2e-27
Identities = 91/328 (27%), Positives = 145/328 (43%), Gaps = 37/328 (11%)
Query: 10 MPSSSSSSSLSQAF---SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIP--E 64
M SSSSSS + A H +S KL +N WK QV +R +L ++ P E
Sbjct: 1 MASSSSSSGAAAANLLQGHSVSEKLGKANHALWKAQVSAAVRGARLLGYLNGDIKAPDAE 60
Query: 65 KFLTEEDKITENVNPLFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFF 124
+T + K T NP F DWE D L+ +LLS+LS +L V C + + W I + +
Sbjct: 61 LSVTIDGKTTTKPNPAFEDWEANDQLVLGYLLSSLSRDVLIQVATCKTAAEAWRSIEALY 120
Query: 125 NAKSRAQSTQLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLS 184
+ +RA++ R L N KGT +E++ +++ + + +A+ G P+ D ++ I GL+
Sbjct: 121 STGTRARAVNTRLALTNTKKGTMKIAEYVAKMRALGDEMAAGGHPLDEEDLVQYIIAGLN 180
Query: 185 EEYSALMTVIYNQTTYFTISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSS 244
E++S +++ + N++ T+ E+ + +++ E D R A F+A
Sbjct: 181 EDFSPIVSNLCNKSDPITVGELYSQLVNFETLLDLYRS---TGQGGAAFVANRGRGGGGG 237
Query: 245 TAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGR 304
+ AP G R ++ GG GR
Sbjct: 238 GRGNNNNSGGGGGRSAP----------------------------GGRGSGSQGRGGRGR 269
Query: 305 GRGRGRGRNVQCTYCSKWGHDAASCWSR 332
G G G+ R C C K GH AA CW R
Sbjct: 270 GTG-GQDRRPTCQVCFKRGHTAADCWYR 296
>UniRef100_Q6F356 Putative polyprotein [Oryza sativa]
Length = 1256
Score = 767 bits (1981), Expect = 0.0
Identities = 420/913 (46%), Positives = 562/913 (61%), Gaps = 64/913 (7%)
Query: 747 ADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLK 806
AD+WGPA + G Y+++ +DA +++TW++ LK KS+ F FQ +VE F K+
Sbjct: 349 ADVWGPAPVAGG-GKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKII 407
Query: 807 SVQTDGGGEFKPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPL 866
S+QTD GGE++ L + F K+GI H ++CPHTH QNGS ERKHRHIVE GL+LL+HAS+PL
Sbjct: 408 SMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPL 467
Query: 867 QFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKL 926
+FWD A+ + YLINRM T L +SP L+ Q PD+++L+ FG AC+P LRPYNS+K+
Sbjct: 468 KFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKM 527
Query: 927 SLHSKECVFIGYSINHKGYKCLDQS-GRIYISKDVLFHEHRFPY---------------- 969
SK C F+GYS HKG++CLD S GRIYIS+DV+F E FP+
Sbjct: 528 HFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFPFAELNPNAGTNLRKEVN 587
Query: 970 ----PILFPTDHSSSSSAEFYPLSTIPIISHTAP-------------------------- 999
+L P D + +YP + +++ P
Sbjct: 588 LLPADMLNPGDVQLNDHVNYYPTAPANMVAAENPVENTEENLASTRDDAADSGGSDTGTI 647
Query: 1000 -PSSPVLAASGH--SSPGPQDSPQQQQPPSATLS-ADDPSTSTPAVVSPPVPSSSAQSAD 1055
+ P A+G ++P DS + SA+ S A S +T + P P Q+
Sbjct: 648 SNADPADDAAGDMTANPNLNDSSTHESSISASASPASQSSVATAPEATLPNPQQHQQALR 707
Query: 1056 TSASVVAAAPPVIVNTHPMQTRAKNGIVKPR-LQPTLLLTHLEPTSVKQAMKDVKWYKAM 1114
+S A+ PV TH + K I R ++ L T EP + A+ D W AM
Sbjct: 708 SSTPEGEASRPV---THLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAM 764
Query: 1115 QEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFD 1174
++TAL++N TW LVP R + KW+Y+IK DGS+++YKARLVAKG+ Q G D
Sbjct: 765 DAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGID 824
Query: 1175 YSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHK-DK 1233
Y +TFSPVVK T+R+ILS+A+SRGW L+QLDV NAFL+G+LEEEVYM QPPG+E K
Sbjct: 825 YEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHP 884
Query: 1234 NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDD 1293
+ VCKL KALYGLKQAPRAW+ +L + L GFQ SK D SLF Y I++LVYVDD
Sbjct: 885 DYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDD 944
Query: 1294 IIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTK 1353
II+ + + L L FALK LG L YFLG++V S+G ++L Q KY++DLL +
Sbjct: 945 IIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSG-IVLTQEKYVTDLLRR 1003
Query: 1354 VNMLDAAAISTPMQCGVKLSKNEGSAL--KDPTEYRSVVGALQYATITRPEISFAVNKVC 1411
V M D +STP+ KL+ +EG L D + YRSVVGALQY T+TRP+I F VNKVC
Sbjct: 1004 VGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVC 1063
Query: 1412 QFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRST 1471
QF+ P HW A+KRILRYLK G+ + S ++ + + Y DADW + DDRRST
Sbjct: 1064 QFLHAPTIVHWAAMKRILRYLKQCTKLGLKI---SKSKSMLVSGYSDADWAGNIDDRRST 1120
Query: 1472 SGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPT 1530
G VFLG NL+SW AKKQ+ V RSSTE+EY++LAN TAE++W+Q+LL EL +P +
Sbjct: 1121 GGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMAR 1180
Query: 1531 VYCDNMSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALS 1590
++CDN+ L+ NP+ H RTKH+E+D FVRE++Q K L V+ +P+ Q AD FTKALS
Sbjct: 1181 LWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKALS 1240
Query: 1591 PTRFLLLKDKLNV 1603
+ K LNV
Sbjct: 1241 ARQLENFKYNLNV 1253
Score = 111 bits (278), Expect = 2e-22
Identities = 83/336 (24%), Positives = 139/336 (40%), Gaps = 59/336 (17%)
Query: 10 MPSSSSSSSLSQAFSHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEK--FL 67
M SSS SS+ ++ KL N+ WK QV VIR +L ++ P +
Sbjct: 1 MASSSQSSASGSLGGITVTEKLSKGNYLIWKVQVLAVIRGARLDSYLTGATKKPSATIII 60
Query: 68 TEEDKITENVNPLFADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAK 127
+ +K E NP +W D + +LL+T+S +L V C + +W I F++
Sbjct: 61 KKNEKEVEVSNPAVDEWIANDQQVLGYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSSA 120
Query: 128 SRAQSTQLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEY 187
+RA+S + L N KG +E++ +++ + + LA+ G+PV D + I GL E++
Sbjct: 121 TRARSINTKIALTNTKKGDLGIAEYVSKMRVLADELATSGKPVDEEDLISYIIAGLDEDF 180
Query: 188 SALMTVIYNQTTYFTISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAP 247
+++ + +++ + ++ E + ++S E R +MR++ A+ LA +
Sbjct: 181 EPIISSLVSKSEHVSLGEAYSQLLSFEQRM-KMRQEHSAN------LANRGRGRGN---- 229
Query: 248 APPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRG 307
P QP +Q R GG RGRG
Sbjct: 230 -------------PGRGRNNKQP----------------------QQQQRGHGGNSRGRG 254
Query: 308 RGRGRN-----------VQCTYCSKWGHDAASCWSR 332
RG N +C C K GH CW R
Sbjct: 255 RGNNSNQRQGGNGVDYRPKCQLCYKRGHTVIDCWYR 290
>UniRef100_Q9SSB1 T18A20.5 protein [Arabidopsis thaliana]
Length = 1522
Score = 746 bits (1925), Expect = 0.0
Identities = 446/1093 (40%), Positives = 612/1093 (55%), Gaps = 98/1093 (8%)
Query: 594 GDDGLYYFDG---PLTKASSQPQSSS----PLSSIQACLASKSAANKASPAIDLQSATVS 646
G D + DG P+T S +SS PL + C P I +VS
Sbjct: 351 GSDSIMVADGNFLPITHTGSGSIASSSGKIPLKEVLVC-----------PDIVKSLLSVS 399
Query: 647 PIVPSLVPCN---NADSVNVS--STVSDLVSCNSGSGI------------------SVYD 683
+ S PC+ +ADSV ++ +T LV + G+ + +
Sbjct: 400 KLT-SDYPCSVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQVLYSTRQNSASSE 458
Query: 684 LWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFE 743
+WH RLGH + +VL Q S +I + NK V + C+AC L K RLP S + P E
Sbjct: 459 VWHRRLGHANAEVLHQLASSKSIII-INKVVKTVCEACHLGKSTRLPFMLSTFNASRPLE 517
Query: 744 LVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGH 803
+ DLWGP+ S GF Y++ +D +++TW +PLK KSD +TF+ FQ +VE Q GH
Sbjct: 518 RIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGH 577
Query: 804 KLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSH 861
K+K Q DGGGEF H Q GI ++CP+T QNG ERKHRHIVE GL+++
Sbjct: 578 KIKIFQCDGGGEFISSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQ 637
Query: 862 ASMPLQFWDHAFLAATYLINRMSTTTLQG-ASPYFKLYGQYPDFKSLKVFGSACFPFLRP 920
+ +PL++W +F A ++IN + T++L SPY KLYG+ P++ +L+VFG AC+P LR
Sbjct: 638 SKLPLKYWLESFFTANFVINLLPTSSLDNNESPYQKLYGKAPEYSALRVFGCACYPTLRD 697
Query: 921 YNSNKLSLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFP----YPILFPT 975
Y S K S +CVF+GY+ +KGY+CL +GRIYIS+ V+F E+ P Y L P
Sbjct: 698 YASTKFDPRSLKCVFLGYNEKYKGYRCLYPPTGRIYISRHVVFDENTHPFESIYSHLHPQ 757
Query: 976 DHSSSSSAEF---------------YPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQ 1020
D + A F YP+S+IP T ++P A+ + P D
Sbjct: 758 DKTPLLEAWFKSFHHVTPTQPDQSRYPVSSIPQPETTDLSAAPASVAAETAGPNASDDTS 817
Query: 1021 QQQP--------PSATLSADDPST-----STPAVVSPPVPSSSAQSADTSASVVAAAPPV 1067
Q P T D S S A S P P+ S+ ++ S + AP
Sbjct: 818 QDNETISVVSGSPERTTGLDSASIGDSYHSPTADSSHPSPARSSPASSPQGSPIQMAPAQ 877
Query: 1068 -----IVNTHPMQTRAKNGIVKPRLQPTLLLTHL----EPTSVKQAMKDVKWYKAMQEEY 1118
+ N H M TR K GI KP + +LLTH EP +V +A+K W AMQEE
Sbjct: 878 QVQAPVTNEHAMVTRGKEGISKPNKR-YVLLTHKVSIPEPKTVTEALKHPGWNNAMQEEM 936
Query: 1119 TALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSET 1178
TWTLVP N +G W++R K + DGS++K KARLVAKG+ Q +G DY ET
Sbjct: 937 GNCKETETWTLVPYSPNMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLET 996
Query: 1179 FSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVC 1237
+SPVV+ TVRLIL +A W L+Q+DV NAFL+G L E VYM QP GF K K + VC
Sbjct: 997 YSPVVRTPTVRLILHVATVLKWELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVC 1056
Query: 1238 KLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIIT 1297
L K+LYGLKQ+PRAWF R L+ FGF S DPSLF Y S+ I +L+YVDD++IT
Sbjct: 1057 LLHKSLYGLKQSPRAWFDRFSNFLLEFGFICSLFDPSLFVYSSNNDVILLLLYVDDMVIT 1116
Query: 1298 GASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNML 1357
G + + L A L+ F +K +GQ+ YFLG+Q+ +G L ++Q KY DLL +M
Sbjct: 1117 GNNSQSLTHLLAALNKEFRMKDMGQVHYFLGIQI-QTYDGGLFMSQQKYAEDLLITASMA 1175
Query: 1358 DAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQP 1417
+ + + TP+ + N+ DPT +RS+ G LQY T+TRP+I FAVN VCQ M QP
Sbjct: 1176 NCSPMPTPLPLQLDRVSNQDEVFSDPTYFRSLAGKLQYLTLTRPDIQFAVNFVCQKMHQP 1235
Query: 1418 HEEHWKAVKRILRYLKGTLTHGILLQPCSMT------RPLPLIAYCDADWGSDPDDRRST 1471
+ +KRILRY+KGT++ GI S + L AY D+D+ + + RRS
Sbjct: 1236 SVSDFNLLKRILRYIKGTVSMGIQYNSNSSSVVSAYESDYDLSAYSDSDYANCKETRRSV 1295
Query: 1472 SGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPT 1530
G C F+G N+ISW++KKQ V+RSSTEAEYRSL+ T +E+ W+ S+L E+ + P
Sbjct: 1296 GGYCTFMGQNIISWSSKKQPTVSRSSTEAEYRSLSETASEIKWMSSILREIGVSLPDTPE 1355
Query: 1531 VYCDNMSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALS 1590
++CDN+S V LT NP H RTKH ++D ++RE+V K+L+V+H+P Q ADIFTK+L
Sbjct: 1356 LFCDNLSAVYLTANPAFHARTKHFDVDHHYIRERVALKTLVVKHIPGHLQLADIFTKSLP 1415
Query: 1591 PTRFLLLKDKLNV 1603
F L+ KL V
Sbjct: 1416 FEAFTRLRFKLGV 1428
Score = 105 bits (262), Expect = 1e-20
Identities = 85/330 (25%), Positives = 136/330 (40%), Gaps = 66/330 (20%)
Query: 24 SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPE--KFLTEEDKITENVNPLF 81
S+ +++ L+ N+ WK Q E + L FV P + +T + +E NP F
Sbjct: 12 SNCVTVTLNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQTRSVTHNNVTSEEPNPEF 71
Query: 82 ADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKN 141
W Q D ++ +WLL + + IL V+ C S+QVW + + FN S ++ +L+ L+
Sbjct: 72 YTWHQTDQVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFELQRRLQT 131
Query: 142 ITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYF 201
+ K T FL+ +K I + LAS+G PV + + + +GL EY + T I N
Sbjct: 132 LEKKDNTMEVFLKDLKHICDQLASVGSPVPEKMKIFSALNGLGREYEPIKTTIENS---- 187
Query: 202 TISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAPAPPPPQAMWTQPAP 261
D+ P++ L + +S Q+ T+P
Sbjct: 188 ------------------------VDSNPSLSLDEV----ASKLRGYDDRLQSYVTEP-- 217
Query: 262 APSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRGRG----RGRGRNVQ-- 315
T++ A +V S DSGY + + + + G G+ RGRG + Q
Sbjct: 218 ----TISPHVAFNVTHS-------DSGYYHNNNRGKGRSNSGSGKSSFSTRGRGFHQQIS 266
Query: 316 -------------CTYCSKWGHDAASCWSR 332
C C K GH A CW R
Sbjct: 267 PTSGSQAGNSGLVCQICGKAGHHALKCWHR 296
Score = 73.9 bits (180), Expect = 4e-11
Identities = 47/151 (31%), Positives = 74/151 (48%), Gaps = 6/151 (3%)
Query: 471 LATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSAL 530
+ V HH W PDS A+ HVTNN + P + ++V +G LPI GS
Sbjct: 315 ITDVTDHHGHE--WIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITHTGSGS 372
Query: 531 LPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLT 590
+ SS + + LK++L+ P I K+L+SVS+ D F A+ ++ + T +LL+
Sbjct: 373 IASS---SGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVM 429
Query: 591 GTVGDDGLYYFDGPLTKASSQPQSSSPLSSI 621
G DGLY + P + + +S S +
Sbjct: 430 GR-NRDGLYSLEEPKLQVLYSTRQNSASSEV 459
>UniRef100_Q8S805 Putative copia-type polyprotein [Oryza sativa]
Length = 1803
Score = 730 bits (1884), Expect = 0.0
Identities = 516/1619 (31%), Positives = 762/1619 (46%), Gaps = 270/1619 (16%)
Query: 5 SSSPSMPSSSSSSSLSQAFSHK----LSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPP 60
S+S P + S+S+ Q + + + + LD SN+ W+ E V+ L+ VQ+PP
Sbjct: 12 STSDEEPVPAPSTSVLQTVNIRSHVPVVLDLDVSNYSQWRCSFESVLGKFGLEAHVQEPP 71
Query: 61 MIPEKFLTEEDKITENVNPLFADWEQQDSLLFTWLLSTLSPAILPNVIQC-VHSYQVWEE 119
+ + A+W + D + WL ++++ + V + ++ VW +
Sbjct: 72 ALDLRT---------------AEWRRADHCVVNWLHNSIAKNVFDVVYKPRASAFTVWSD 116
Query: 120 IHSFFNAKSRAQSTQLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAI 179
I F + +S L E ++I +G T +++ ++K + + L I PV+ + +
Sbjct: 117 IEGVFRDNAVQRSVYLETEFRSINQGDMTITQYTAKLKQLADGLRDINMPVSEPSQVLNL 176
Query: 180 FDGLSEEYSALMTVIYNQTTYFTISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQN 239
GL+ ++ +L I ++ T + ++ E +M+ A+ A++ +
Sbjct: 177 LRGLNTKFRSLRASIADRNPPHTFMTARSYLLLAEL---QMQHDAKAEAGEALYAGTGSS 233
Query: 240 SPSSSTAPAPPPPQAMWTQPAPAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNS 299
S +S T P P
Sbjct: 234 SGTSDTTGQPRPK----------------------------------------------- 246
Query: 300 GGYGRGRGRGRGRNVQCTYCSKWGHDAASCWSRPSGVSSNANSSANSAQSGNSGSNFSVP 359
GRG+ RGRG + P G S A + G P
Sbjct: 247 ---GRGKRRGRGGG-----------------APPGGAPSTPGGGAGAGHDGQPR-----P 281
Query: 360 GVNLGFSPMQFGGFPSMANFGF-----------PPYAPYNSMLPQYGSSVLSPSSMPPWS 408
G++P + GF F F PP+ +M Q+ L P ++PP S
Sbjct: 282 PAPWGYNP--WTGFVQAWPFPFRAPGAGVLGPRPPFQAQQAMTAQH----LLP-ALPPAS 334
Query: 409 PWCIPPTPYSHATDMQGMQAAGMSFVRPWLPQGQFPAPTAQTPQFPRPPQQQVSTGMHPQ 468
P + ++ +Q+AG++ P
Sbjct: 335 PGVHSTGAWDNSALYSALQSAGVATTTP-------------------------------- 362
Query: 469 AMLATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGS 528
S W D+GA+ H+++ PGI P + VGNG LP+ S
Sbjct: 363 ----------PSAADWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTAS 412
Query: 529 ALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELL 588
+P+S + L L +L+ P + KNL+SV + RDNNV F S+ T +
Sbjct: 413 THIPTS---STDLHLHNVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVK 469
Query: 589 LTGTVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPI 648
L P PL P+ SAT SP
Sbjct: 470 L------------------RCDSPGDLYPL---------------RLPSPHALSATSSPS 496
Query: 649 VPSL-VPCNNADSVNVSSTVSDL-VSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNI 706
V + + S ++S + CN + PHH
Sbjct: 497 VEHWHLRLGHPGSASLSKVLGSFDFQCNKSA--------------PHH------------ 530
Query: 707 SVPSNKSVFSFCKACCLSKLHRLP--SSSSNTVYNTPFELVFADLWGPASLESSCGFLYF 764
C AC + RLP SSSS T++ PF+LV D+W + + S+ G+ Y+
Sbjct: 531 -----------CSACHVGTNVRLPFHSSSSQTLF--PFQLVHTDVW-TSPIYSNSGYKYY 576
Query: 765 LTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFK--PLTSH 822
+ +D T Y W FP++ KS+ T +F A QFG + ++QTD G E+ L S
Sbjct: 577 VVFLDDFTHYIWTFPVRNKSEVFHTVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSL 636
Query: 823 FQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINR 882
G + RL+CP++ QNG ER R I + +L H++ PL FW A A +LINR
Sbjct: 637 LSLHGAVLRLSCPYSSQQNGKAERILRTINDCVRTMLVHSAAPLSFWAEALQTAMHLINR 696
Query: 883 MSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINH 942
PY L G P + L+VFG C+P +KLS S CVFIGY +H
Sbjct: 697 RPCRATGSLKPYQLLLGAPPTYDHLRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADH 756
Query: 943 KGYKCLDQ-SGRIYISKDVLFHEHRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAP-P 1000
+GY+C D S R++ S+ V F E FP+ P+ S+ + TI ++ A
Sbjct: 757 RGYRCYDMVSRRVFTSRHVTFVEDVFPFRDA-PSPRPSAPPPPDHGDDTIVLLPAPAQHV 815
Query: 1001 SSPVLAASGHSSPGPQDSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTSASV 1060
+PV A H + P SP P SA + D V PP P +S S
Sbjct: 816 VTPVGTAPAHDAASP-PSPASSTPSSAAPAHD--------VAPPPSPETS--------SP 858
Query: 1061 VAAAPPVIVNTHPMQTRAKNGIVKPRLQPTLLLTHL---EPTSVKQAMKDVKWYKAMQEE 1117
+A+PP H M TRA+ GI KP + + T P+SV+ A++D W AMQ E
Sbjct: 859 ASASPP----RHAMTTRARAGISKPNPRYAMTATSTLSPTPSSVRVALRDPNWRAAMQAE 914
Query: 1118 YTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSE 1177
+ AL+ N TWTLVP P + KW+++ K + DGS++KYKAR V +G++Q G D+ E
Sbjct: 915 FDALLANRTWTLVPRPPGARIITGKWVFKTKLHADGSLDKYKARWVVRGFNQRPGVDFGE 974
Query: 1178 TFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDKNL-V 1236
TFSPVVKP T+R +L+L S+ WP QLDV+NAFL+G L+E V QP GFE + V
Sbjct: 975 TFSPVVKPATIRTVLTLISSKQWPAHQLDVSNAFLHGHLQERVLCQQPTGFEDAARPADV 1034
Query: 1237 CKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIII 1296
C L ++LYGL+QAPRAWF R + GF S+ DPSLF Y+L+YVDD+I+
Sbjct: 1035 CLLSRSLYGLRQAPRAWFKRFADHATSLGFVQSRADPSLFVLRRGSDTAYLLLYVDDMIL 1094
Query: 1297 TGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNM 1356
+ +S SL+Q++ +L + F +K +G L YFLG++V ++G +L+Q+KY +D+L + M
Sbjct: 1095 SASSSSLLQRIIDRLQAEFKVKDMGPLKYFLGIEVQRTADG-FVLSQSKYATDVLERAGM 1153
Query: 1357 LDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQ 1416
+ A++TP KLS +EG +D + YRS+ GALQY T+TRP+I++AV +VC M
Sbjct: 1154 ANCKAVATPADAKPKLSSDEGPLFQDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHA 1213
Query: 1417 PHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCV 1476
P E H +KRILRY+KGT G+ L+ + T P L A+ DADW PD RRSTSG C+
Sbjct: 1214 PREAHVTLLKRILRYIKGTAAFGLHLR--ASTSP-TLTAFSDADWAGCPDTRRSTSGFCI 1270
Query: 1477 FLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPTV-YCDN 1535
FLG +LISW++K+Q+ V+RSS EAEYR +AN AE W++ LL EL T+ YCDN
Sbjct: 1271 FLGDSLISWSSKRQTTVSRSSAEAEYRGVANAVAECTWLRQLLGELHCRVPQATIAYCDN 1330
Query: 1536 MSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRF 1594
+S+V ++ NP+ H RTKH+E+DI FVREKV L V +PS HQ AD+FTK L + F
Sbjct: 1331 ISSVYMSKNPVHHKRTKHIELDIHFVREKVALGELRVLPIPSAHQFADVFTKGLPSSMF 1389
>UniRef100_Q9SA17 F28K20.17 protein [Arabidopsis thaliana]
Length = 1415
Score = 725 bits (1871), Expect = 0.0
Identities = 435/1154 (37%), Positives = 625/1154 (53%), Gaps = 148/1154 (12%)
Query: 484 WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASLIL 543
W PDS AT HVT++ + +LVG+G LPI GS + SS + L
Sbjct: 322 WHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSS---NGKIPL 378
Query: 544 KKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGLYYFDG 603
++L+VP+I K+L+SVS+ D F AN + T +++ TG +GLY +
Sbjct: 379 NEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGP-RRNGLYVLEN 437
Query: 604 PLTKASSQPQSSSPLSSIQACLASKS--------AANKA------SPAIDLQSATVSPIV 649
Q L S + C A++ A +KA S AI + + SP+
Sbjct: 438 ---------QEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVC 488
Query: 650 PSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVP 709
PC S + +SD SR+ HP
Sbjct: 489 E---PCQMGKSSRLPFLISD-----------------SRVLHP----------------- 511
Query: 710 SNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVD 769
L ++H DLWGP+ + S+ G Y+ VD
Sbjct: 512 -------------LDRIH-------------------CDLWGPSPVVSNQGLKYYAIFVD 539
Query: 770 ACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEF--KPLTSHFQKLG 827
++Y+W +PL KS+ + FI+FQ +VE Q K+K Q+DGGGEF L +H + G
Sbjct: 540 DYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHG 599
Query: 828 IIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTT 887
I HR++CP+T QNG ERKHRH+VE GL++L H+ P +FW +F A Y+INR+ ++
Sbjct: 600 IHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSV 659
Query: 888 LQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKC 947
L+ SPY L+G+ PD+ SL+VFGSAC+P LRP NK S +CVF+GY+ +KGY+C
Sbjct: 660 LKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRC 719
Query: 948 L-DQSGRIYISKDVLFHEHRFPYPILFPTDHSSSSSAEFYPLSTIPI--------ISHTA 998
+G++YIS++V+F+E P+ P + P+ IS +
Sbjct: 720 FYPPTGKVYISRNVIFNESELPF---------KEKYQSLVPQYSTPLLQAWQHNKISEIS 770
Query: 999 PPSSPVLAASGHSSPGPQDSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTS- 1057
P++PV S +P A T ++ P P+S+ + +D
Sbjct: 771 VPAAPVQLFS--------------KPIDLNTYAGSQVTEQ---LTDPEPTSNNEGSDEEV 813
Query: 1058 ---ASVVAAAPPVIVNTHPMQTRAKNGIVKPRLQPTLLLTHL---EPTSVKQAMKDVKWY 1111
A +AA ++N+H M TR+K GI KP + L+ + + EP ++ AMK W
Sbjct: 814 NPVAEEIAANQEQVINSHAMTTRSKAGIQKPNTRYALITSRMNTAEPKTLASAMKHPGWN 873
Query: 1112 KAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQ 1171
+A+ EE + TW+LVP + + KW+++ K +PDGSI+K KARLVAKG+ Q +
Sbjct: 874 EAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEE 933
Query: 1172 GFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHK 1231
G DY ETFSPVV+ T+RL+L ++ S+GWP++QLDV+NAFL+G L+E V+M QP GF
Sbjct: 934 GVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDP 993
Query: 1232 DK-NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVY 1290
K VC+L KA+YGLKQAPRAWF L+ +GF SK DPSLF + +Y+L+Y
Sbjct: 994 QKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLY 1053
Query: 1291 VDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDL 1350
VDDI++TG+ SL++ L L + F++K LG YFLG+Q+ +NG L L+QT Y +D+
Sbjct: 1054 VDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIEDYANG-LFLHQTAYATDI 1112
Query: 1351 LTKVNMLDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKV 1410
L + M D + TP+ +L +PT +RS+ G LQY TITRP+I FAVN +
Sbjct: 1113 LQQAGMSDCNPMPTPLP--QQLDNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFI 1170
Query: 1411 CQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRS 1470
CQ M P + +KRILRY+KGT+ G+ P L L AY D+D + RRS
Sbjct: 1171 CQRMHSPTTSDFGLLKRILRYIKGTIGMGL---PIKRNSTLTLSAYSDSDHAGCKNTRRS 1227
Query: 1471 TSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT 1530
T+G C+ LG NLISW+AK+Q V+ SSTEAEYR+L E+ W+ LL +L IP +PT
Sbjct: 1228 TTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPT 1287
Query: 1531 -VYCDNMSTVILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKAL 1589
VYCDN+S V L+ NP LH R+KH + D ++RE+V + QH+ + Q AD+FTK+L
Sbjct: 1288 QVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSL 1347
Query: 1590 SPTRFLLLKDKLNV 1603
F+ L+ KL V
Sbjct: 1348 PRRAFVDLRSKLGV 1361
Score = 107 bits (268), Expect = 2e-21
Identities = 88/320 (27%), Positives = 135/320 (41%), Gaps = 53/320 (16%)
Query: 27 LSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPE--KFLTEEDKITENVNPLFADW 84
+++KL DSN+ WK Q E ++ S KL FV P + + + +E NPL+ W
Sbjct: 17 VTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESW 76
Query: 85 EQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITK 144
D L+ +WL TLS +L +V S Q+W + FN S A+ LR L+ ++K
Sbjct: 77 FCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSK 136
Query: 145 GTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYF--- 201
K S + + KTI + L+SIG+PV + +GL +Y + TVI + +
Sbjct: 137 KEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKLPTP 196
Query: 202 TISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAPAPPPPQAMWTQPAP 261
T ++V + V +++ ++ A TP + S S +P P Q
Sbjct: 197 TFNDVVSEVQGFDSKLQSY--EEAASVTPHLAF---NIERSESGSPQYNPNQ-------- 243
Query: 262 APSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYG-RGRGRGR--------GR 312
G G R QN+ GGY RGRG + G
Sbjct: 244 -------------------------KGRG-RSGQNKGRGGYSTRGRGFSQHQSSPQVSGP 277
Query: 313 NVQCTYCSKWGHDAASCWSR 332
C C + GH A C++R
Sbjct: 278 RPVCQICGRTGHTALKCYNR 297
>UniRef100_O81824 Hypothetical protein AT4g27210 [Arabidopsis thaliana]
Length = 1318
Score = 707 bits (1826), Expect = 0.0
Identities = 398/954 (41%), Positives = 539/954 (55%), Gaps = 79/954 (8%)
Query: 683 DLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPF 742
++WH RLGHPH +L+ P
Sbjct: 310 EVWHRRLGHPHPQILQ------------------------------------------PL 327
Query: 743 ELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFG 802
E V DLWGP ++ S GF Y+ +D ++++W++PLK KSD F+ F +VE Q
Sbjct: 328 ERVHCDLWGPTTITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFLAFHKLVENQLS 387
Query: 803 HKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLS 860
K+ Q DGGGEF H Q GI +L+CPHT QNG ERKHRH+VE GL++L
Sbjct: 388 QKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSCPHTPQQNGLAERKHRHLVELGLSMLF 447
Query: 861 HASMPLQFWDHAFLAATYLINRMSTTTL-QGASPYFKLYGQYPDFKSLKVFGSACFPFLR 919
+ +P +FW AF A +LIN + T+ L + SPY KLY + PD+ SL+ FGSACFP LR
Sbjct: 448 QSHVPHKFWVEAFFTANFLINLLPTSALKESISPYEKLYDKKPDYTSLRSFGSACFPTLR 507
Query: 920 PYNSNKLSLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFPY--------- 969
Y NK + S +CVF+GY+ +KGY+CL +GR+YIS+ V+F E +P+
Sbjct: 508 DYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPTGRLYISRHVIFDESVYPFSHTYKHLHP 567
Query: 970 ----PILF--------PTDHSSSSSAEFYPLST---IPIISHTAPPSSPVLAASGHSSPG 1014
P+L P +S+S + PL T P + P P L S
Sbjct: 568 QPRTPLLAAWLRSSDSPAPSTSTSPSSRSPLFTSADFPPLPQRKTPLLPTLVPISSVSHA 627
Query: 1015 PQDSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTHPM 1074
+ QQ + + D S S S ++ ASV N HPM
Sbjct: 628 SNITTQQSPDFDSERTTDFDSASIGDSSHSSQAGSDSEETIQQASVNVHQTHASTNVHPM 687
Query: 1075 QTRAKNGIVKPRLQPTLL---LTHLEPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTLVP 1131
TRAK GI KP + L +++ EP +V A+K W AM EE TW+LVP
Sbjct: 688 VTRAKVGISKPNPRYVFLSHKVSYPEPKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVP 747
Query: 1132 LPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLI 1191
++ +G KW++R K + DG++NK KAR+VAKG+ Q +G DY ET+SPVV+ TVRL+
Sbjct: 748 YKSDMHVLGSKWVFRTKLHADGTLNKLKARIVAKGFLQEEGIDYLETYSPVVRTPTVRLV 807
Query: 1192 LSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVCKLQKALYGLKQAP 1250
L LA + W ++Q+DV NAFL+G L+E VYM QP GF K + VC L K++YGLKQ+P
Sbjct: 808 LHLATALNWDIKQMDVKNAFLHGDLKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSP 867
Query: 1251 RAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQ 1310
RAWF + L+ FGF SK DPSLF Y + I +L+YVDD++ITG S + L A
Sbjct: 868 RAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLILLLLYVDDMVITGNSSQTLTSLLAA 927
Query: 1311 LHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGV 1370
L+ F + +GQL YFLG+QV NG L ++Q KY DLL +M + TP+ +
Sbjct: 928 LNKEFRMTDMGQLHYFLGIQVQRQQNG-LFMSQQKYAEDLLIAASMEHCTPLPTPLPVQL 986
Query: 1371 KLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILR 1430
++ DPT +RS+ G LQY T+TRP+I FAVN VCQ M QP + +KRILR
Sbjct: 987 DRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNFVCQKMHQPTISDFHLLKRILR 1046
Query: 1431 YLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQ 1490
Y+KGT+T GI S P L AY D+DWG+ RRS G C F+G NL+SW++KK
Sbjct: 1047 YIKGTITMGI---SYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKH 1103
Query: 1491 SLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPTVYCDNMSTVILTHNPILHT 1549
V+RSSTEAEY+SL++ +E+LW+ +LL EL+IP P ++CDN+S V LT NP H
Sbjct: 1104 PTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAVYLTANPAFHA 1163
Query: 1550 RTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNV 1603
RTKH ++D FVRE+V K+L+V+H+P Q ADIFTK+L F+ L+ KL V
Sbjct: 1164 RTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTKSLPYEAFIHLRGKLGV 1217
Score = 69.7 bits (169), Expect = 7e-10
Identities = 44/116 (37%), Positives = 64/116 (54%), Gaps = 4/116 (3%)
Query: 484 WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASLIL 543
W PDS AT HVTN+P P + ++V +G LPI GS L SS + ++ L
Sbjct: 177 WLPDSAATAHVTNSPRSLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASS---SGTVPL 233
Query: 544 KKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGLY 599
+L+ PSITK+L+S+S+ +D F + V+ + T +LLL G+ DGLY
Sbjct: 234 TDVLVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGS-NRDGLY 288
Score = 50.1 bits (118), Expect = 6e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 134 QLRNELKNITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTV 193
+L+ L+N++K KT +L +K I + LAS+G PVT + + A +GL EY + T
Sbjct: 49 ELQRRLQNVSKRDKTMDAYLNDLKNICDQLASVGSPVTEKMKIFAALNGLGREYEPIKTT 108
Query: 194 IYNQTTYFTISEVEAMVISHEARFDRMRKKQLADTTPAVFLA 235
I N +E VI +D + L +TT + ++A
Sbjct: 109 IENSMDTQPGPSLE-NVIPKLTGYDDRLQGYLEETTISPYVA 149
>UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 706 bits (1823), Expect = 0.0
Identities = 396/955 (41%), Positives = 566/955 (58%), Gaps = 54/955 (5%)
Query: 683 DLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFS-FCKACCLSKLHRLPSSSSNTVYNTP 741
++WH RLGH + +L+Q S IS NKS S C+ C + K +L SSN+
Sbjct: 457 EIWHHRLGHSNSRILQQLKSSKEISF--NKSRMSPVCEPCQMGKSSKLQFFSSNSRELDL 514
Query: 742 FELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQF 801
+ DLWGP+ + S GF Y++ VD ++Y+W +PLK KSD A F+ FQ +VE QF
Sbjct: 515 LGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQF 574
Query: 802 GHKLKSVQTDGGGEFKP--LTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALL 859
K+K Q+DGGGEF + H GI HR++CP+T QNG ERKHRH VE GL+++
Sbjct: 575 NTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSMM 634
Query: 860 SHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLR 919
H+ PLQFW AF A++L N + + +L SP L Q P++ L+VFG+AC+P LR
Sbjct: 635 FHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLR 694
Query: 920 PYNSNKLSLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFP----YPILFP 974
P +K S +CVF+GY+ +KGY+CL +GR+YIS+ V+F E FP Y L P
Sbjct: 695 PLGEHKFEPRSLQCVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEETFPFKQKYQFLVP 754
Query: 975 TDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSATLSADDP 1034
SS SA S+IP + P + G +S +PPS +
Sbjct: 755 QYESSLLSAW---QSSIPQADQSLIPQA---------EEGKIES--LAKPPSIQKNTIQD 800
Query: 1035 STSTPAVVSPPV-------------------PSSSAQSADTSASVVAAAPPVIVNTHPMQ 1075
+T+ PA+++ V + Q+ + +V NTHPM
Sbjct: 801 TTTQPAILTEGVLNEEEEEDSFEETETESLNEETHTQNDEAEVTVEEEVQQEPENTHPMT 860
Query: 1076 TRAKNGIVKPRLQPTLLLTHL---EPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTLVPL 1132
TR+K GI K + LL + EP S+ +A+ W A+ +E + TW+LV
Sbjct: 861 TRSKAGIHKSNTRYALLTSKFSVEEPKSIDEALNHPGWNNAVNDEMRTIHMLHTWSLVQP 920
Query: 1133 PANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLIL 1192
+ +GC+W+++ K PDGS++K KARLVAKG+ Q +G DY ETFSPVV+ T+RL+L
Sbjct: 921 TEDMNILGCRWVFKTKLKPDGSVDKLKARLVAKGFHQEEGLDYLETFSPVVRTATIRLVL 980
Query: 1193 SLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVCKLQKALYGLKQAPR 1251
+A ++GW ++QLDV+NAFL+G L+E VYM+QPPGF ++K + VC+L KALYGLKQAPR
Sbjct: 981 DVATAKGWNIKQLDVSNAFLHGELKEPVYMLQPPGFVDQEKPSYVCRLTKALYGLKQAPR 1040
Query: 1252 AWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQL 1311
AWF + L+ FGF SK DPSLFTY+ + + +L+YVDDI++TG+ +L+Q+L L
Sbjct: 1041 AWFDTISNYLLDFGFSCSKSDPSLFTYHKNGKTLVLLLYVDDILLTGSDHNLLQELLMSL 1100
Query: 1312 HSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVK 1371
+ F++K LG YFLGV++ G L L+QT Y D+L + M + ++ TP+ ++
Sbjct: 1101 NKRFSMKDLGAPSYFLGVEIESSPEG-LFLHQTAYAKDILHQAAMSNCNSMPTPLPQHIE 1159
Query: 1372 LSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRY 1431
++ +PT +RS+ G LQY TITRP+I FAVN +CQ M P + +KRILRY
Sbjct: 1160 NLNSD--LFPEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTADFGLLKRILRY 1217
Query: 1432 LKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQS 1491
+KGT+ G+ ++ + L L+AY D+DW + RRST+G C LG NLISW+AK+Q
Sbjct: 1218 VKGTIHLGLHIK---KNQNLSLVAYSDSDWAGCKETRRSTTGFCTLLGCNLISWSAKRQE 1274
Query: 1492 LVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPILHTR 1550
V++SSTEAEYR+L EL W+ LL ++ + T PT V CDN+S V L+ NP LH R
Sbjct: 1275 TVSKSSTEAEYRALTAVAQELTWLSFLLRDIGVTQTHPTLVKCDNLSAVYLSANPALHNR 1334
Query: 1551 TKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVVD 1605
+KH + D ++RE+V + +H+ + Q ADIFTK L F+ L+ KL V +
Sbjct: 1335 SKHFDTDYHYIREQVALGLVETKHISATLQLADIFTKPLPRRAFIDLRIKLGVAE 1389
Score = 100 bits (249), Expect = 4e-19
Identities = 89/320 (27%), Positives = 128/320 (39%), Gaps = 46/320 (14%)
Query: 24 SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLT--EEDKITENVNPLF 81
S +++KL+DSN+ WK Q E ++ HKL FV P + L D + NP +
Sbjct: 14 SSSVTLKLNDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTLNVVTGDTSVDVANPQY 73
Query: 82 ADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKN 141
W D L+ +WL TLS +L V S +W + FN S A+ LR L+
Sbjct: 74 ESWFCTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNKSSVAREFTLRRTLQL 133
Query: 142 ITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYF 201
++K KT S + + + + L+SIG+PV + +GL EY + TVI + +
Sbjct: 134 LSKKDKTLSAYCREFIAVCDALSSIGKPVDESMKIFGFLNGLGREYDPITTVIQSSLSKI 193
Query: 202 TISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAPAPPPPQAMWTQPAP 261
+ VIS FD + Q+ S TA P A TQ +
Sbjct: 194 SPPTFRD-VISEVKGFD----------------VKLQSYEESVTA---NPHMAFNTQRSE 233
Query: 262 APSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYG-RGRG--------RGRGR 312
+ + GYG QNR GY RGRG G
Sbjct: 234 YTDNYTSGNRGKG-----------RGGYG----QNRGRSGYSTRGRGFSQHQTNSNNTGE 278
Query: 313 NVQCTYCSKWGHDAASCWSR 332
C C + GH A C++R
Sbjct: 279 RPVCQICGRTGHTALKCYNR 298
Score = 62.0 bits (149), Expect = 1e-07
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 479 SSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPT 538
SS W PDS AT HVT++ P + + +LVG+G LPI +GS + S +
Sbjct: 320 SSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDGAYLPITHVGSTTISSD---S 376
Query: 539 ASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGL 598
+L L ++L+ P I K+L+SVS+ D F AN + +T +++ G +GL
Sbjct: 377 GTLPLNEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIIDINTQKVVSKGP-RSNGL 435
Query: 599 YYFD 602
Y +
Sbjct: 436 YVLE 439
>UniRef100_Q94IU9 Copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 706 bits (1822), Expect = 0.0
Identities = 424/1085 (39%), Positives = 608/1085 (55%), Gaps = 78/1085 (7%)
Query: 574 ANHCSVHHQDTYELLLTGTVGDDGLYYFDG---PLTKASSQPQSSS----PLSSIQACLA 626
A+ + + TYE G+D + DG P+T S SSS PL+ + C A
Sbjct: 336 ASTSGLQNATTYE-------GNDAVLVGDGTYLPITHVGSTTISSSKGTIPLNEVLVCPA 388
Query: 627 SKSAANKASPAID--------------LQSATVSPIVPSLVPCNNADSVNVSSTVSDLVS 672
+ + S D + T +V S P NN + +S L S
Sbjct: 389 IQKSLLSVSKLCDDYPCGVYFDANKVCIIDLTTQKVV-SKGPRNNGLYMLENSEFVALYS 447
Query: 673 CNSGSGISVYDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFS-FCKACCLSKLHRLPS 731
N S+ + WH RLGH + +L+Q L+ I V NKS S C+ C + K RL
Sbjct: 448 -NRQCAASM-ETWHHRLGHSNSKILQQLLTRKEIQV--NKSRTSPVCEPCQMGKSTRLQF 503
Query: 732 SSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFI 791
SS+ P + V DLWGP+ + S+ GF Y+ VD ++++W FPL+ KS + FI
Sbjct: 504 FSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMKSKFISVFI 563
Query: 792 NFQAMVELQFGHKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHR 849
+Q +VE Q G K+K Q+DGGGEF L HF++ GI HR++CP+T QNG ERKHR
Sbjct: 564 AYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGVAERKHR 623
Query: 850 HIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKV 909
H+VE GL++L H+ PL+FW AF A YL N + ++ L+ SPY L+ Q D+ L+V
Sbjct: 624 HLVELGLSMLYHSHTPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRV 683
Query: 910 FGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFP 968
FG+AC+P LRP NK S +CVF+GY +KGY+CL +G++YIS+ V+F E +FP
Sbjct: 684 FGTACYPCLRPLAKNKFDPRSLQCVFLGYHNQYKGYRCLYPPTGKVYISRHVIFDEAQFP 743
Query: 969 YPILFPTDHSSSSSAEFYPLSTIPIISHT--APPSSPVLAASGHSSPGPQDSPQQQQPPS 1026
+ S Y + + HT PPS P S Q +Q P +
Sbjct: 744 F------KEKYHSLVPKYQTTLLQAWQHTDLTPPSVP--------SSQLQPLARQMTPMA 789
Query: 1027 ATLSADDPSTSTPAVVSPPVPSSSAQSADTSASVVAAAPPV--------------IVNTH 1072
+ + + T V+ + +SS + +++ PV + N H
Sbjct: 790 TSENQPMMNYETEEAVNVNMETSSDEETESNDEFDHEVAPVLNDQNEDNALGQGSLENLH 849
Query: 1073 PMQTRAKNGIVKPRLQPTLLLTHL---EPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTL 1129
PM TR+K+GI KP + L+++ EP ++ AMK W A+ +E + TW+L
Sbjct: 850 PMITRSKDGIQKPNPRYALIVSKSSFDEPKTITTAMKHPSWNAAVMDEIDRIHMLNTWSL 909
Query: 1130 VPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVR 1189
VP + + KW+++ K PDG+I+K KARLVAKG+ Q +G DY ETFSPVV+ T+R
Sbjct: 910 VPATEDMNILTSKWVFKTKLKPDGTIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIR 969
Query: 1190 LILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK-NLVCKLQKALYGLKQ 1248
L+L A + WPL+QLDV+NAFL+G L+E V+M QP GF +K N VC+L KALYGLKQ
Sbjct: 970 LVLDTATANEWPLKQLDVSNAFLHGELQEPVFMFQPSGFVDPNKPNHVCRLTKALYGLKQ 1029
Query: 1249 APRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLT 1308
APRAWF L+ FGF+ S DPSLF + + + +L+YVDDI++TG+ L+ +L
Sbjct: 1030 APRAWFDTFSNFLLDFGFECSTSDPSLFVCHQNGQSLILLLYVDDILLTGSDQLLMDKLL 1089
Query: 1309 AQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQC 1368
L++ F++K LG YFLG+++ +NG L L+Q Y SD+L + M + + TP+
Sbjct: 1090 QALNNRFSMKDLGPPRYFLGIEIESYNNG-LFLHQHAYASDILHQAGMTECNPMPTPLP- 1147
Query: 1369 GVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRI 1428
L ++PT +RS+ G LQY TITRP+I +AVN +CQ M P + +KRI
Sbjct: 1148 -QHLEDLNSEPFEEPTYFRSLAGKLQYLTITRPDIQYAVNFICQRMHAPTNSDFGLLKRI 1206
Query: 1429 LRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAK 1488
LRY+KGT+ G+ P L +CD+D+ D RRST+G C+ LG LISW+AK
Sbjct: 1207 LRYVKGTINMGL---PIRKHHNPVLSGFCDSDYAGCKDTRRSTTGFCILLGSTLISWSAK 1263
Query: 1489 KQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPIL 1547
+Q ++ SSTEAEYR+L++T E+ W+ SLL +L I PT V+CDN+S V L+ NP L
Sbjct: 1264 RQPTISHSSTEAEYRALSDTAREITWISSLLRDLGISQHQPTRVFCDNLSAVYLSANPAL 1323
Query: 1548 HTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVVDKQ 1607
H R+KH + D ++RE+V + QH+P+ Q AD+FTK+L F+ L+ KL V
Sbjct: 1324 HKRSKHFDKDFHYIRERVALGLIETQHIPATIQLADVFTKSLPRRPFITLRAKLGVSASP 1383
Query: 1608 VLLSP 1612
V +P
Sbjct: 1384 VSPTP 1388
Score = 117 bits (294), Expect = 2e-24
Identities = 96/320 (30%), Positives = 140/320 (43%), Gaps = 47/320 (14%)
Query: 24 SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQD--PPMIPEKFLTEEDKITENVNPLF 81
S +++KL+DSN+ WK Q E ++ S KL FV P + + +D +E NP +
Sbjct: 14 SSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQY 73
Query: 82 ADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKN 141
DW D L+ +WL TLS +L +V S Q+W + FN S A+ LR L+
Sbjct: 74 EDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQL 133
Query: 142 ITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTYF 201
+TK K+ S + + K I ++L+SIG+PV + +GL EY + TVI + +
Sbjct: 134 LTKKDKSLSVYCRDFKIICDSLSSIGKPVEESMKIFGFLNGLGREYDPITTVIQSSLSKL 193
Query: 202 TISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAPAPPPPQAMWTQPAP 261
VIS FD K Q D T +V A N+ S++ AP
Sbjct: 194 PAPTFND-VISEVQGFD--SKLQSYDDTVSVNPHLAFNTERSNSG-------------AP 237
Query: 262 APSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYG-RGRGRGR--------GR 312
+S +S R QNR GGY RGRG + G+
Sbjct: 238 QYNS--------------------NSRGRGRSGQNRGRGGYSTRGRGFSQHQSASPSSGQ 277
Query: 313 NVQCTYCSKWGHDAASCWSR 332
C C + GH A C++R
Sbjct: 278 RPVCQICGRIGHTAIKCYNR 297
Score = 57.4 bits (137), Expect = 4e-06
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 484 WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASLIL 543
W PDS AT H+T + + + +LVG+G LPI +GS + SS ++ L
Sbjct: 324 WYPDSAATAHITASTSGLQNATTYEGNDAVLVGDGTYLPITHVGSTTISSS---KGTIPL 380
Query: 544 KKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGLYYFD 602
++L+ P+I K+L+SVS+ D F AN + T +++ G ++GLY +
Sbjct: 381 NEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLTTQKVVSKGP-RNNGLYMLE 438
>UniRef100_Q8S1E5 Putative gag/pol polyprotein [Oryza sativa]
Length = 1090
Score = 699 bits (1803), Expect = 0.0
Identities = 410/956 (42%), Positives = 549/956 (56%), Gaps = 48/956 (5%)
Query: 684 LWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFE 743
LWH RLGHP + ++ +IS NK S C AC L K RLP +S++ + PFE
Sbjct: 124 LWHCRLGHPGPAAIHGLRNIASISC--NKIDTSLCHACQLGKHTRLPFHNSSSRTSVPFE 181
Query: 744 LVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGH 803
LV D+W + + S+ GF Y+L +D + + W F L+ KSD + F V QFG
Sbjct: 182 LVHCDVW-TSPVMSTSGFKYYLVVLDDFSHFCWTFLLRLKSDVHRHIVEFVEYVSTQFGL 240
Query: 804 KLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSH 861
LKS Q D G EF +T+ G RL+CP+T QNG ER R I + LL
Sbjct: 241 PLKSFQADNGREFVNTAITTFLASRGTQLRLSCPYTSPQNGKAERMLRTINNSIRTLLIQ 300
Query: 862 ASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPY 921
ASMP +W A ATYL+NR ++++ + P+ L+ PDF L+VFG C+P L
Sbjct: 301 ASMPPSYWAEALATATYLLNRRPSSSIHQSLPFQLLHRTIPDFSHLRVFGCLCYPNLSAT 360
Query: 922 NSNKLSLHSKECVFIGYSINHKGYKCLDQSG-RIYISKDVLFHEHRFPYPI--------- 971
+KLS S CVF+GY +HKGY+CLD S RI IS+ V+F E +FP+
Sbjct: 361 TPHKLSPRSTACVFLGYPTSHKGYRCLDLSTHRIIISRHVVFDESQFPFAATPPAASSFD 420
Query: 972 -----LFPTDHSSSSSAEFYPLSTIPIISHTAPPSS-PVLAASGHSSPGPQDSPQQQQPP 1025
L P D S + PL+ P P P S + ++P P
Sbjct: 421 FLLQGLSPADAPSLEVEQPRPLTVAPSTEVEQPYLPLPSRRLSAGTVTVASEAPSAGAPL 480
Query: 1026 SATLSAD--DPSTSTPA--VVSP--------PVPSSSAQSADTSASVVAAAPPVIVNTHP 1073
T SAD P ++T A +VSP PV + S+ + VAA P H
Sbjct: 481 VGTSSADATPPGSATRASTIVSPFRHVYTRRPVTTVPPSSSTAVTNAVAAPQP-----HS 535
Query: 1074 MQTRAKNGIVKPRLQPTLLLTHLE----PTSVKQAMKDVKWYKAMQEEYTALMNNGTWTL 1129
M TR+++G ++P + T T P + A+ D W AM +EY L++NGTW L
Sbjct: 536 MVTRSQSGSLRPVDRLTYTATQAAASPVPANYHSALADPNWRAAMADEYKELVDNGTWRL 595
Query: 1130 VPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVR 1189
V P KWI++ K + DGS+ +YKAR V +GYSQ G DY ETFSPVVK T+R
Sbjct: 596 VSRPPRANIATGKWIFKHKFHSDGSLARYKARWVVRGYSQQHGIDYDETFSPVVKLATIR 655
Query: 1190 LILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGF-EHKDKNLVCKLQKALYGLKQ 1248
++LS+A SR WP+ QLDV NAFL+G L+E VY QP GF + + VC LQK+LYGLKQ
Sbjct: 656 VVLSIAASRAWPIHQLDVKNAFLHGHLKETVYCQQPSGFVDPTAPDAVCLLQKSLYGLKQ 715
Query: 1249 APRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLT 1308
APRAW+ R + + GF S D SLF Y Y+L+YVDDII+T ++ +L+QQLT
Sbjct: 716 APRAWYQRFATYIRQMGFMPSASDTSLFVYKDGDRIAYLLLYVDDIILTASTTTLLQQLT 775
Query: 1309 AQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQC 1368
A+LHS FA+ LG L +FLG+ V +G L L+Q +Y DLL + M + + STP+
Sbjct: 776 ARLHSEFAMTDLGDLHFFLGISVKRSPDG-LFLSQRQYAVDLLQRAGMAECHSTSTPVDT 834
Query: 1369 GVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRI 1428
KLS +G + DP+ YRS+ GALQY T+TRP++++AV +VC FM P E H VKRI
Sbjct: 835 HAKLSATDGLPVADPSAYRSIAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLALVKRI 894
Query: 1429 LRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAK 1488
LRY+KG+L+ G+ + + L AY DADW P+ RRSTSG CV+LG NL+SW++K
Sbjct: 895 LRYVKGSLSIGLHIGSGPIQ---SLTAYSDADWAGCPNSRRSTSGYCVYLGDNLVSWSSK 951
Query: 1489 KQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPIL 1547
+Q+ V+RSS EAEYR++A+ AE W++ LL EL +P T VYCDN+S V +T NP+
Sbjct: 952 RQTTVSRSSAEAEYRAVAHAVAECCWLRQLLQELHVPIASATIVYCDNVSAVYMTANPVH 1011
Query: 1548 HTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNV 1603
H RTKH+E+DI FVREKV + V +VPS HQ ADI TK L F + L V
Sbjct: 1012 HRRTKHIEIDIHFVREKVALGQVRVLYVPSSHQFADIMTKGLPVQLFTDFRSSLCV 1067
>UniRef100_Q9SLL4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 691 bits (1782), Expect = 0.0
Identities = 420/1037 (40%), Positives = 569/1037 (54%), Gaps = 102/1037 (9%)
Query: 594 GDDGLYYFDG---PLTKASSQPQSSS----PLSSIQACLASKSAANKASPAIDLQSATVS 646
G D + DG P+T S +SS PL+ + C P+I +VS
Sbjct: 357 GSDAVMVADGNFLPITHTGSTNLASSSGNVPLTDVLVC-----------PSITKSLLSVS 405
Query: 647 PIVPSLVPCN---NADSVNVS-----------STVSDLVSCNSGSGISVY---------- 682
+ PC ++D V ++ ST L S +
Sbjct: 406 KLTQDY-PCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCLKDDSQFKAFFSTRQQSASD 464
Query: 683 DLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPF 742
++WH RLGHPH VL+Q + +IS+ NK+ S C+AC L K RLP SS+ N P
Sbjct: 465 EVWHRRLGHPHPQVLQQLVKTNSISI--NKTSKSLCEACQLGKSTRLPFVSSSFTSNRPL 522
Query: 743 ELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFG 802
E V DLWGP+ + S GF Y+ +D ++++W++PLK KSD F+ F +VE Q
Sbjct: 523 ERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLN 582
Query: 803 HKLKSVQTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLS 860
HK+ Q DGGGEF H Q GI ++ PHT QNG ERKHRH+VE GL++L
Sbjct: 583 HKISVFQCDGGGEFVNHKFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELGLSMLF 642
Query: 861 HASMPLQFWDHAFLAATYLINRMSTTTLQGA-SPYFKLYGQYPDFKSLKVFGSACFPFLR 919
+ +PL+FW AF A +LIN + T+ ++ A SPY KL+ PD+ +L+ FG ACFP +R
Sbjct: 643 QSKVPLKFWVEAFFTANFLINLLPTSAVEDAISPYEKLHQTTPDYTALRSFGCACFPTMR 702
Query: 920 PYNSNKLSLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFPYPILFPTDHS 978
Y NK S +CVF+GY+ +KGY+CL +GR+YIS+ V+F E +P+ + HS
Sbjct: 703 DYAMNKFDPRSLKCVFLGYNDKYKGYRCLYPPTGRVYISRHVIFDETAYPFSHHYKHLHS 762
Query: 979 SSSSA---------EFYPLSTIPIISHTAPPS------SPVLAASGHSSPGPQDSPQQQQ 1023
++ E P +S PP +P L + P P+ SPQ Q
Sbjct: 763 QPTTPLLAAWFKGFESSVSQAPPKVSPAQPPQRKATLPTPPLFTAADFPPLPRRSPQLSQ 822
Query: 1024 PPSATLSADDPSTST------PAVV-----------SPPVPSSSAQSA----DTSASVVA 1062
+A L PST+T PAVV S + SS S DT ++A
Sbjct: 823 NSAAAL-VSQPSTTTINSTHPPAVVNESSERTINFDSASIGDSSHSSQLLVDDTVEDLMA 881
Query: 1063 A------APPVIVNTHPMQTRAKNGIVKPRLQPTLL---LTHLEPTSVKQAMKDVKWYKA 1113
A APP NTHPM TRAK GI KP + L +T+ EP +V A+K W A
Sbjct: 882 APVPTQQAPPP-TNTHPMITRAKVGITKPNPRYVFLSHKVTYPEPKTVTAALKHPGWTGA 940
Query: 1114 MQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGF 1173
M EE TW+LVP N +G KW++R K + DG++NK KAR+VAK + Q +G
Sbjct: 941 MTEEMGNCSETNTWSLVPYTPNMHVLGSKWVFRTKLHADGTLNKLKARIVAKCFLQEEGI 1000
Query: 1174 DYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDK 1233
Y ET+SPVV+ TV+L+L LA + W L+Q+DV NAFL+G L E VYM QP GF K K
Sbjct: 1001 GYLETYSPVVRTPTVQLVLHLATALNWELKQMDVKNAFLHGDLNETVYMTQPAGFVDKSK 1060
Query: 1234 -NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVD 1292
VC L K++YGLKQ+PRAWF + L+ FGF SK DPSLF Y + I +L+YVD
Sbjct: 1061 PTHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLILLLLYVD 1120
Query: 1293 DIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLT 1352
D++ITG S + L A L+ F + +GQL YFLG+QV +G L ++Q KY DLL
Sbjct: 1121 DMVITGNSSQTLSSLLAALNKEFRMTDMGQLHYFLGIQVQRNQHG-LFMSQQKYAEDLLV 1179
Query: 1353 KVNMLDAAAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQ 1412
M + + TP+ + ++ DPT +RS+ G LQY T+TRP+I FAVN VCQ
Sbjct: 1180 ASAMENCTPLPTPLPVQLDRVPHQEEPFTDPTYFRSIAGKLQYLTLTRPDIHFAVNFVCQ 1239
Query: 1413 FMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTS 1472
M QP + +KRILRY+KGT+T GI + P L AY D+DWG+ RRS
Sbjct: 1240 KMHQPTMSDFHLLKRILRYIKGTITMGI---SYNQNSPTLLQAYSDSDWGNCKLTRRSVG 1296
Query: 1473 GSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPF-TIPTV 1531
G C F+ NL+SW++KK V+RSSTEAEYR+L++ +E+LW+ +LL EL IP P +
Sbjct: 1297 GLCTFMATNLVSWSSKKHPTVSRSSTEAEYRTLSDAASEILWLSTLLRELGIPLPDTPEL 1356
Query: 1532 YCDNMSTVILTHNPILH 1548
+CDN+S V T NP H
Sbjct: 1357 FCDNLSAVYHTANPAFH 1373
Score = 103 bits (257), Expect = 4e-20
Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 64/332 (19%)
Query: 24 SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEED---KITENVNPL 80
S+ +++ L N+ WK Q E + L FV P + D + + NP
Sbjct: 12 SNCVTVTLTAKNYILWKSQFESFLDGQGLLGFVTGSIPAPSQTSVVSDIDGSTSASPNPE 71
Query: 81 FADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELK 140
+ W + D ++ +WLL + IL V+ C S++VW + + FN S ++ +L+ L+
Sbjct: 72 YYTWFKTDRVVKSWLLGSFLEDILSVVVNCNTSHEVWISVANHFNRVSSSRLFELQRRLQ 131
Query: 141 NITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVIYNQTTY 200
N++K K+ E+L+ +KTI + LAS+G PVT + + A +GL EY + T I N
Sbjct: 132 NVSKRDKSMDEYLKDLKTICDQLASVGSPVTEKMKIFAALNGLGREYEPIKTTIENSMDA 191
Query: 201 FTISEVEAMVISHEARFDRMRKKQLADTTPAVFLAQAQNSPSSSTAPAPPPPQAMWTQPA 260
+E ++ DR++ +L + SP
Sbjct: 192 LPGPSLEDVIPKLTGYDDRLQG----------YLEETAVSPH------------------ 223
Query: 261 PAPSSTMAQPPATSVAPSQPVDTAVDSGYGNRDEQNRNSGGYGRG----RGRG------- 309
A ++ S D + SGY N + + GR RGRG
Sbjct: 224 ----------VAFNITTS---DDSNASGYFNAYNRGKGKSNRGRNSFSTRGRGFHQQISS 270
Query: 310 ---------RGRNVQCTYCSKWGHDAASCWSR 332
G +V C C K GH A CW R
Sbjct: 271 TNSSSGSQSGGTSVVCQICGKMGHPALKCWHR 302
Score = 71.2 bits (173), Expect = 2e-10
Identities = 50/136 (36%), Positives = 75/136 (54%), Gaps = 7/136 (5%)
Query: 484 WCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASLIL 543
W PDS AT HVTN+P P + ++V +G LPI GS L SS + ++ L
Sbjct: 332 WLPDSAATAHVTNSPRSLQQSQPYHGSDAVMVADGNFLPITHTGSTNLASS---SGNVPL 388
Query: 544 KKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGTVGDDGLYYF-D 602
+L+ PSITK+L+SVS+ +D F ++ ++ + T +LL+ G+ DGLY D
Sbjct: 389 TDVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGVRINDKATKKLLIMGST-CDGLYCLKD 447
Query: 603 GPLTKA--SSQPQSSS 616
KA S++ QS+S
Sbjct: 448 DSQFKAFFSTRQQSAS 463
>UniRef100_Q710T7 Gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 679 bits (1753), Expect = 0.0
Identities = 384/957 (40%), Positives = 553/957 (57%), Gaps = 49/957 (5%)
Query: 661 VNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLK---QTLSLCNISVPSNKSVFSF 717
V V++T DL S + LWHSRLGH L+ T +L N+ S
Sbjct: 457 VVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVSSSRLRFLASTGALGNLKTCD----ISD 512
Query: 718 CKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWV 777
C C L+K LP + S +V ++PF+L+ +D+WGP+ + + G Y+++ +D T+Y WV
Sbjct: 513 CSGCKLAKFSALPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWV 572
Query: 778 FPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKL----GIIHRLT 833
+ +K +S+ + F+A+++ Q +K + D GGE+ ++ F ++ G IH+ +
Sbjct: 573 YLMKHRSEFFEIYAAFRALIKTQHSAVIKCFRCDLGGEYT--SNKFCQMLALDGTIHQTS 630
Query: 834 CPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASP 893
C T QNG ERKHRHIVET +LL A + +FW A L A LIN + ++ G SP
Sbjct: 631 CTDTPEQNGVAERKHRHIVETARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLSP 690
Query: 894 YFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLDQ-SG 952
+ KLYG PD+ S +VFG F NKLS S CVF+GY KGY+C D +
Sbjct: 691 FEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQ 750
Query: 953 RIYISKDVLFHEHRFPYPILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSS 1012
++Y+S V+F EH P +IP +H+ S + H
Sbjct: 751 KLYVSHHVVFLEH--------------------IPFFSIPSTTHSLTKSDLI-----HID 785
Query: 1013 PGPQDSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTH 1072
P +DS P ++ + + + + P S S+ + S+ +V P +
Sbjct: 786 PFSEDSGNDTSPYVRSICTHNSAGTGTLLSGTPEASFSSTAPQASSEIVDPPPRQSIRIR 845
Query: 1073 PMQTRAKNGIVKPRLQPTLLLTHL----EPTSVKQAMKDVKWYKAMQEEYTALMNNGTWT 1128
T L ++ EP+S K+A+ D +AM EE +AL TW
Sbjct: 846 KSTKLPDFAYSCYSSSFTSFLAYIHCLFEPSSYKEAILDPLGQQAMDEELSALHKTDTWD 905
Query: 1129 LVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITV 1188
LVPLP ++ VGC+W+Y+IK N DGSI +YKARLVAKGYSQ G DY ETF+P+ K T+
Sbjct: 906 LVPLPPGKSVVGCRWVYKIKTNSDGSIERYKARLVAKGYSQQYGMDYEETFAPIAKMTTI 965
Query: 1189 RLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDKNLVCKLQKALYGLKQ 1248
R ++++A R W + QLDV NAFLNG L+EEVYM PPG H D VCKL+KALYGLKQ
Sbjct: 966 RTLIAVASIRQWHISQLDVKNAFLNGDLQEEVYMAPPPGISH-DSGYVCKLKKALYGLKQ 1024
Query: 1249 APRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLT 1308
APRAWF + V+ GF +S D +LF + G I + +YVDD+IITG + I L
Sbjct: 1025 APRAWFEKFSIVISSLGFVSSSHDSALFIKCTDAGRIILSLYVDDMIITGDDIDGISVLK 1084
Query: 1309 AQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQC 1368
+L F +K LG L YFLG++V + G LL+Q+KY++++L + + D + TP++
Sbjct: 1085 TELARRFEMKDLGYLRYFLGIEVAYSPRG-YLLSQSKYVANILERARLTDNKTVDTPIEV 1143
Query: 1369 GVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRI 1428
+ S ++G L DPT YR++VG+L Y TIT P+I++AV+ V QF+A P HW AV RI
Sbjct: 1144 NARYSSSDGLPLIDPTLYRTIVGSLVYLTITHPDIAYAVHVVSQFVASPTTIHWAAVLRI 1203
Query: 1429 LRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAK 1488
LRYL+GT+ +LL S T L L AY DAD GSDP DR+S +G C+FLG +LISW +K
Sbjct: 1204 LRYLRGTVFQSLLL---SSTSSLELRAYSDADHGSDPTDRKSVTGFCIFLGDSLISWKSK 1260
Query: 1489 KQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFT-IPTVYCDNMSTVILTHNPIL 1547
KQS+V++SSTEAEY ++A+TT E++W + LL ++ I F+ + +YCDN S++ + HN +
Sbjct: 1261 KQSIVSQSSTEAEYCAMASTTKEIVWSRWLLADMGISFSHLTPMYCDNQSSIQIAHNSVF 1320
Query: 1548 HTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVV 1604
H RTKH+E+D R ++ ++ + VPS Q AD FTKA S +RF L KL+++
Sbjct: 1321 HERTKHIEIDCHLTRHHLKHGTIALPFVPSSLQIADFFTKAHSISRFCFLVGKLSML 1377
Score = 57.8 bits (138), Expect = 3e-06
Identities = 43/151 (28%), Positives = 70/151 (45%), Gaps = 15/151 (9%)
Query: 458 QQQVSTGMHPQAMLATVPA---HHSSPVT---WCPDSGATHHVTNNPGIFVDHVPSSSQE 511
Q Q + PQAM A+ H SS ++ W DSGA+HH++ + F P SS
Sbjct: 310 QFQKFLSLQPQAMSASSIGQLPHSSSGISHSEWVLDSGASHHMSPDSSSFTSVSPLSSIP 369
Query: 512 QLLVGNGQGLPIQSIGSALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFS 571
++ +G +P+ +GS + T L L + L+P + NL S+ + +
Sbjct: 370 -VMTADGTPMPLAGVGSVV-------TLHLSLPNVYLIPKLKLNLASIGQICDSGDYLVM 421
Query: 572 FHANHCSVHHQDTYELLLTGTVGDDGLYYFD 602
F + C V + +L+ TG ++GLY D
Sbjct: 422 FSGSFCCVQDLQSQKLIGTGR-RENGLYILD 451
Score = 51.6 bits (122), Expect = 2e-04
Identities = 42/233 (18%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 27 LSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQDPPMIPEKFLTEEDKITENVNPLFAD-WE 85
+S++LD N+ W + ++ K+ +V ++P K TE + + D WE
Sbjct: 12 VSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSGTYVVP--------KNTEEGDTVSIDTWE 63
Query: 86 QQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKG 145
++ + TW+ + + +I + + + +VW+ + F + A+ QL N+++ + +
Sbjct: 64 ANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLENDIRALHQK 123
Query: 146 TKTASEFLQRIKTIVNTLA--------SIGEPVTFRD--HLEAIFDGLSEEYSALMTVIY 195
+ EF + + + LA + G + R+ L L ++ L I
Sbjct: 124 NMSIQEFYSAMTDLWDQLALTESVELKACGAYIERREQQRLVQFLTALRSDFEGLRGSIL 183
Query: 196 NQTTYFTISEVEAMVISHEARFDRMRKKQ-LADTTPAVFLAQAQNSPSSSTAP 247
+++ ++ V + +++ E R +K L+ + P+V ++ + P
Sbjct: 184 HRSPLPSVDSVVSELLAEEIRLQSYSEKGILSASNPSVLAVPSKPFSNHQNKP 236
>UniRef100_Q7XE85 Putative pol polyprotein [Oryza sativa]
Length = 1688
Score = 678 bits (1749), Expect = 0.0
Identities = 422/1182 (35%), Positives = 623/1182 (52%), Gaps = 129/1182 (10%)
Query: 464 GMHPQAMLATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPI 523
G+ + ++TV S P W DSGA+ H++ + + + NG +
Sbjct: 166 GIASCSSISTVTPIASQP--WILDSGASFHMSFDDSWLTSCRLVKNGATVHTANGTLCKV 223
Query: 524 QSIGSALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQD 583
GS P P SL VP ++ NL+SV + D N F F C V +
Sbjct: 224 THQGSISSPQFTVPNVSL-------VPKLSMNLISVGQLT-DTNCFVGFDDTSCFVQDRH 275
Query: 584 TYELLLTG--TVGDDGLYYFDGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQ 641
T ++ TG GLY D + S P SS+ S+ + + S
Sbjct: 276 TGAVIGTGHRQKRSCGLYILD-----SLSLPSSSTNTPSVYSPMCS-------------- 316
Query: 642 SATVSPIVPSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRLGHPHHDVLKQTL 701
+C S + WH RLGH L +
Sbjct: 317 -----------------------------TACKS------FPQWHHRLGHLCGSRLATLI 341
Query: 702 SLCNI-SVPSNKSVFSFCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCG 760
+ + SVP + + CK C L K +LP SS + + PF+LV +D+WG + S G
Sbjct: 342 NQGVLGSVPVDTTFV--CKGCKLGKQVQLPYPSSTSRSSRPFDLVHSDVWGKSPFPSKGG 399
Query: 761 FLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLT 820
Y++ VD ++YTW++ +K +S + + +F M+ QF ++ ++D GGE+ ++
Sbjct: 400 HNYYVIFVDDYSRYTWIYFMKHRSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGEY--MS 457
Query: 821 SHFQKL----GIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAA 876
+ F++ G + +L+CP H QNG ERKHRHI+ET LL + +P FW A A
Sbjct: 458 NAFREFLVSQGTLPQLSCPGAHAQNGVAERKHRHIIETARTLLIASFVPAHFWAEAISTA 517
Query: 877 TYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFI 936
YLIN +++LQG SP L+G P + L+VFG C+ L P KL+ S ECVF+
Sbjct: 518 VYLINMQPSSSLQGRSPGEVLFGSPPRYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFL 577
Query: 937 GYSINHKGYKCLDQSGR-IYISKDVLFHEHRFPYPILFPTDHSSSS---SAEFYPLSTIP 992
GYS+ HKGY+C D S R I IS+DV F E++ P + + + SS S F L IP
Sbjct: 578 GYSLEHKGYRCYDPSARRIRISRDVTFDENK---PFFYSSTNQPSSPENSISFLYLPPIP 634
Query: 993 IISHTAPPSSPVLAASGHSSPGPQDSPQQQQPPSATLSADDPSTSTPAVVSPP---VPSS 1049
S + PSSP+ P SP PS T P + +P+ VSPP +P+S
Sbjct: 635 --SPESLPSSPIT---------PSPSPIPPSVPSPTYVPPPPPSPSPSPVSPPPSHIPAS 683
Query: 1050 SAQ-------SADTSASVVAAAPPVIVNTHPMQT--------------------RAKNGI 1082
S+ + DT + P + + P Q RA++ +
Sbjct: 684 SSPPHVPSTITLDTFPFHYSRRPKIPNESQPSQPTLEDPTCSVDDSSPAPRYNLRARDAL 743
Query: 1083 VKPRLQPTLLLTHLEPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCK 1142
P ++ EP++ ++A+ W AM EE AL TW +VPLP++ P+ CK
Sbjct: 744 RAPNRDDFVVGVVFEPSTYQEAIVLPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCK 803
Query: 1143 WIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPL 1202
W+Y++K DG + +YKARLVA+G+ Q G DY ETF+PV TVR ++++A +R W +
Sbjct: 804 WVYKVKTKSDGQVERYKARLVARGFQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTI 863
Query: 1203 QQLDVNNAFLNGVLEEEVYMVQPPGFEHKDKNLVCKLQKALYGLKQAPRAWFHRLKEVLI 1262
Q+DV NAFL+G L EEVYM PPG E + V +L++ALYGLKQAPRAWF R V++
Sbjct: 864 SQMDVKNAFLHGDLHEEVYMHPPPGVEAPPGH-VFRLRRALYGLKQAPRAWFARFSSVVL 922
Query: 1263 RFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQ 1322
GF S DP+LF + SS+G +L+YVDD++ITG + I + +L F + LG
Sbjct: 923 AAGFSPSDHDPALFIHTSSRGRTLLLLYVDDMLITGDDLEYIAFVKGKLSEQFMMSDLGP 982
Query: 1323 LDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSALKD 1382
L YFLG++VT +G L+Q +YI DLL + + D+ +TPM+ V+L +G+ L D
Sbjct: 983 LSYFLGIEVTSTVDG-YYLSQHRYIEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLDD 1041
Query: 1383 PTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILL 1442
P+ YR +VG+L Y T+TRP+I++AV+ + QF++ P H+ + R+LRYL+GT T +
Sbjct: 1042 PSRYRHLVGSLVYLTVTRPDIAYAVHILSQFVSAPISVHYGHLLRVLRYLRGTTTQCLFY 1101
Query: 1443 QPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEY 1502
S PL L A+ D+ W SDP DRRS +G C+FLG +L++W +KKQ+ V+RSSTEAE
Sbjct: 1102 AASS---PLQLRAFSDSTWASDPIDRRSVTGYCIFLGTSLLTWKSKKQTAVSRSSTEAEL 1158
Query: 1503 RSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPILHTRTKHMEMDIFFV 1561
R+LA TT+E++W++ LL + + +PT + CDN + + ++PI H TKH+ +D F
Sbjct: 1159 RALATTTSEIVWLRWLLADFGVSCDVPTPLLCDNTGAIQIANDPIKHELTKHIGVDASFT 1218
Query: 1562 REKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNV 1603
R Q ++ + +VPSE Q AD FTKA + L KLNV
Sbjct: 1219 RSHCQQSTIALHYVPSELQVADFFTKAQTREHHRLHLLKLNV 1260
>UniRef100_Q9SXF0 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 663 bits (1711), Expect = 0.0
Identities = 419/1125 (37%), Positives = 601/1125 (53%), Gaps = 111/1125 (9%)
Query: 531 LPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLT 590
L ++P ++I L +P+ T N V D ++ A+ + + TYE
Sbjct: 175 LGREYDPITTVIQSSLSKLPAPTYNDVISEVQGFDTHIT----ASTSGLQNATTYE---- 226
Query: 591 GTVGDDGLYYFDG---PLTKASSQPQSSS----PLSSIQACLASKSAANKASPAID---- 639
G+D + DG P+T S SSS PL+ + C A + + S D
Sbjct: 227 ---GNDAVLVGDGTYLPITHVGSTTISSSKGTIPLNEVLVCPAIQKSLLSVSKLCDDYPC 283
Query: 640 ----------LQSATVSPIVPSLVPCNNADSVNVSSTVSDLVSCNSGSGISVYDLWHSRL 689
+ T +V S P NN + +S L S N S+ + WH RL
Sbjct: 284 GVYFDANKVCIIDLTTQKVV-SKGPRNNGLYMLENSEFVALYS-NRQCAASM-ETWHHRL 340
Query: 690 GHPHHDVLKQTLSLCNISVPSNKSVFS-FCKACCLSKLHRLPSSSSNTVYNTPFELVFAD 748
GH + +L+Q L+ I V NKS S C+ C + K RL SS+ P + V D
Sbjct: 341 GHSNSKILQQLLTRKEIQV--NKSRTSPVCEPCQMGKSTRLQFFSSDFRALKPLDRVHCD 398
Query: 749 LWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVELQFGHKLKSV 808
LWGP+ + S+ Q +VE Q G K+K
Sbjct: 399 LWGPSPVVSN-----------------------------------QKLVENQLGTKIKEF 423
Query: 809 QTDGGGEF--KPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALLSHASMPL 866
Q+DGGGEF L HF++ GI HR++CP+T QNG ERKHRH+VE GL++L H+ PL
Sbjct: 424 QSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPL 483
Query: 867 QFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLRPYNSNKL 926
+FW AF A YL N + ++ L+ SPY L+ Q D+ L+VFG+AC+P LRP NK
Sbjct: 484 KFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKF 543
Query: 927 SLHSKECVFIGYSINHKGYKCL-DQSGRIYISKDVLFHEHRFPYPILFPTDHSSSSSAEF 985
S +CVF+GY +KGY+CL +G++YIS+ V+F E +FP+ S
Sbjct: 544 DPRSLQCVFLGYHNQYKGYRCLYPPTGKVYISRHVIFDEAQFPF------KEKYHSLVPK 597
Query: 986 YPLSTIPIISHT--APPSSP-----------VLAASGHSSPGPQDSPQQQQPPSATLSAD 1032
Y + + HT PPS P A+ + P ++ + S+D
Sbjct: 598 YQTTLLQAWQHTDLTPPSVPSSQLQPLARQVTPMATSENQPMMNYETEEAVNVNMETSSD 657
Query: 1033 DPSTSTPAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTHPMQTRAKNGIVKPRLQPTLL 1092
+ + S P + Q+ D A + N HPM TR+K+GI KP + L+
Sbjct: 658 EETESNDEFDHEVAPVLNDQNEDN-----ALGQGSLENLHPMITRSKDGIQKPNPRYALI 712
Query: 1093 LTHL---EPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTLVPLPANRTPVGCKWIYRIKE 1149
++ EP ++ AMK W A+ +E + TW+LVP + + KW+++ K
Sbjct: 713 VSKSSFDEPKTITTAMKHPGWNAAVMDEIDRIHMLNTWSLVPATEDMNILTSKWVFKTKL 772
Query: 1150 NPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQLDVNN 1209
PDG+I+K KARLVAKG+ Q +G DY ETFSPVV+ T+RL+L A + WPL+QLDV+N
Sbjct: 773 KPDGTIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDTATANEWPLKQLDVSN 832
Query: 1210 AFLNGVLEEEVYMVQPPGFEHKDK-NLVCKLQKALYGLKQAPRAWFHRLKEVLIRFGFQA 1268
AFL+G L+E V+M QP GF +K N VC+L KALYGLKQAPRAWF L+ FGF+
Sbjct: 833 AFLHGELQEPVFMFQPSGFVDPNKPNHVCRLTKALYGLKQAPRAWFDTFSNFLLDFGFEC 892
Query: 1269 SKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLTAQLHSIFALKQLGQLDYFLG 1328
S DPSLF + + + +L+YVDDI++TG+ L+ +L L++ F++K LG YFLG
Sbjct: 893 STSDPSLFVCHQNGQSLILLLYVDDILLTGSDQLLMDKLLQALNNRFSMKDLGPPRYFLG 952
Query: 1329 VQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQCGVKLSKNEGSALKDPTEYRS 1388
+++ +NG L L+Q Y SD+L + M + + TP+ L ++PT +RS
Sbjct: 953 IEIESYNNG-LFLHQHAYASDILHQAGMTECNPMPTPLP--QHLEDLNSEPFEEPTYFRS 1009
Query: 1389 VVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKRILRYLKGTLTHGILLQPCSMT 1448
+ G LQY TITRP+I +AVN +CQ M P + +KRILRY+KGT+ G+ P
Sbjct: 1010 LAGKLQYLTITRPDIQYAVNFICQRMHAPTNSDFGLLKRILRYVKGTINMGL---PIRKH 1066
Query: 1449 RPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTAKKQSLVARSSTEAEYRSLANT 1508
L +CD+D+ D RRST+G C+ LG LISW+AK+Q ++ SSTEAEYR+L++T
Sbjct: 1067 HNPVLSGFCDSDYAGCKDTRRSTTGFCILLGSTLISWSAKRQPTISHSSTEAEYRALSDT 1126
Query: 1509 TAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPILHTRTKHMEMDIFFVREKVQD 1567
E+ W+ SLL +L I PT V+CDN+S V L+ NP LH R+KH + D ++RE+V
Sbjct: 1127 AREITWISSLLRDLGISQHQPTRVFCDNLSAVYLSANPALHKRSKHFDKDFHYIRERVAL 1186
Query: 1568 KSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVVDKQVLLSP 1612
+ QH+P+ Q AD+FTK+L F+ L+ KL V V +P
Sbjct: 1187 GLIETQHIPATIQLADVFTKSLPRRPFITLRAKLGVSASPVSPTP 1231
Score = 103 bits (258), Expect = 3e-20
Identities = 60/173 (34%), Positives = 91/173 (51%), Gaps = 2/173 (1%)
Query: 24 SHKLSIKLDDSNFYSWKQQVEGVIRSHKLQKFVQD--PPMIPEKFLTEEDKITENVNPLF 81
S +++KL+DSN+ WK Q E ++ S KL FV P + + +D +E NP +
Sbjct: 14 SSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDDVTSEVPNPQY 73
Query: 82 ADWEQQDSLLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKN 141
DW D L+ +WL TLS +L +V S Q+W + FN S A+ LR L+
Sbjct: 74 EDWFCTDQLVRSWLFGTLSEEVLGHVHNLTTSRQIWISLAENFNKSSIAREFSLRRNLQL 133
Query: 142 ITKGTKTASEFLQRIKTIVNTLASIGEPVTFRDHLEAIFDGLSEEYSALMTVI 194
+TK K+ S + + K I ++L+SIG+PV + +GL EY + TVI
Sbjct: 134 LTKKDKSLSLYCRDFKIICDSLSSIGKPVEESMKIFGFLNGLGREYDPITTVI 186
Score = 45.4 bits (106), Expect = 0.014
Identities = 37/135 (27%), Positives = 65/135 (47%), Gaps = 5/135 (3%)
Query: 468 QAMLATVPAHHSSPVTWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIG 527
Q+ L+ +PA + V G H+T + + + +LVG+G LPI +G
Sbjct: 187 QSSLSKLPAPTYNDVI-SEVQGFDTHITASTSGLQNATTYEGNDAVLVGDGTYLPITHVG 245
Query: 528 SALLPSSFNPTASLILKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYEL 587
S + SS ++ L ++L+ P+I K+L+SVS+ D F AN + T ++
Sbjct: 246 STTISSS---KGTIPLNEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLTTQKV 302
Query: 588 LLTGTVGDDGLYYFD 602
+ G ++GLY +
Sbjct: 303 VSKGP-RNNGLYMLE 316
>UniRef100_Q9FJV3 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 660 bits (1702), Expect = 0.0
Identities = 407/1138 (35%), Positives = 596/1138 (51%), Gaps = 129/1138 (11%)
Query: 483 TWCPDSGATHHVTNNPGIFVDHVPSSSQEQLLVGNGQGLPIQSIGSALLPSSFNPTASLI 542
TW DSGATHHV+ + +F + + ++ + G + I IG L S+ L
Sbjct: 445 TWIIDSGATHHVSYDRNLF-ESLSDGLSNEVTLPTGSNVKIAGIGVIKLNSN------LT 497
Query: 543 LKKLLLVPSITKNLVSVSRFARDNNVFFSFHANHCSVHHQDTYELLLTGT-VGDDGLYYF 601
LK +L +P NL+SVS+ +D F + C + + + G +G GLY
Sbjct: 498 LKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIG--GLYVL 555
Query: 602 DGPLTKASSQPQSSSPLSSIQACLASKSAANKASPAIDLQSATVSPIVPSLVPCNNADSV 661
D S V C SV
Sbjct: 556 D-----------------------------------------------TSSVECT---SV 565
Query: 662 NVSSTVSDLVSCNSGSGISVYD--LWHSRLGHPHH---DVLKQTLSLCNISVPSNKSVFS 716
+++S+V++ CN+ V D LWHSRLGHP + DVL L L NK
Sbjct: 566 DINSSVTEKQYCNA-----VVDSALWHSRLGHPSYEKNDVLHDVLGLPK----RNKEDLV 616
Query: 717 FCKACCLSKLHRLPSSSSNTVYNTPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTW 776
C C +K L S N + F+L+ D WGP + ++ G+ YFLT VD ++ TW
Sbjct: 617 HCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATW 676
Query: 777 VFPLKKKSDTCATFINFQAMVELQFGHKLKSVQTDGGGEFKPLTSHFQKLGIIHRLTCPH 836
V+ +K K+D F +F MVE Q+G +K+V++D E + + +Q GII +CP
Sbjct: 677 VYLMKAKNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPELR-FEALYQAKGIISYHSCPE 735
Query: 837 THHQNGSVERKHRHIVETGLALLSHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFK 896
T QN VERKH+HI+ AL+ A+MPL+FW L+A +LINR+ T L SP+
Sbjct: 736 TPQQNSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFEL 795
Query: 897 LYGQYPDFKSLKVFGSACFPFLRPYNSNKLSLHSKECVFIGYSINHKGYKCLD-QSGRIY 955
L+ + PD+ SLKVFG C+ P +K + ++ CVF+GY +KGYK LD ++ I+
Sbjct: 796 LHLKVPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIH 855
Query: 956 ISKDVLFHEHRFPYP--ILFPTDHSSSSSAEFYPLSTIPIISHTAPPSSPVLAASGHSSP 1013
IS+ V+F+E FP+ + P D + P S +AP S
Sbjct: 856 ISRHVVFYETVFPFTDKTIIPRDVFDLVDPVHENIENPPSTSESAPKVS----------- 904
Query: 1014 GPQDSPQQQQPPSATLSADDPSTSTPAVVSPPVPSSSAQSADTSASVVAAAPPVIVNTHP 1073
S ++ +PP D + P V +A T S A VN +P
Sbjct: 905 ----SKRESRPPGYL--QDYFCNAVPDVTKDVRYPLNAYINYTQLSEEFTAYICAVNKYP 958
Query: 1074 MQTRAKNGIVKPRLQPTLLLTHLEPTSVKQAMKDVKWYKAMQEEYTALMNNGTWTLVPLP 1133
EP + QA K +W AM+ E AL + TW++ LP
Sbjct: 959 -----------------------EPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLP 995
Query: 1134 ANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILS 1193
+ P+GCKW++++K N DGS+ ++KARLVAKGY+Q +G DY +TFSPV K TV+ +LS
Sbjct: 996 QGKKPIGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLS 1055
Query: 1194 LAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKD-----KNLVCKLQKALYGLKQ 1248
+A + W L QLD++NAFLNG L+EE+YM PPG+ K +N V KLQK+LYGLKQ
Sbjct: 1056 VAAIKEWSLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQ 1115
Query: 1249 APRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGASMSLIQQLT 1308
A R W+ + L + GF+ S D +LFT S + I +LVYVDDI+I G + I++L
Sbjct: 1116 ASRQWYLKFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELK 1175
Query: 1309 AQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDAAAISTPMQC 1368
L F L+ LG + YFLG+++ G + + Q KY +LL +L + PM+
Sbjct: 1176 KDLAKAFKLRDLGPMKYFLGLEIARTKEG-ISVCQRKYTMELLEDTGLLGCRPSTIPMEP 1234
Query: 1369 GVKLSK-NEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHEEHWKAVKR 1427
+KLS+ N+ + +P YR +VG L Y TITRP+I++A+N++CQF + P H KA ++
Sbjct: 1235 SLKLSQHNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQK 1294
Query: 1428 ILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLGYNLISWTA 1487
++ YLKGT+ G+ S L L AY DADWGS D RRSTSG C+FLG +LISW +
Sbjct: 1295 VVHYLKGTIGLGLFY---SSKSDLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKS 1351
Query: 1488 KKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPT-VYCDNMSTVILTHNPI 1546
KKQ++ + SS E+EYR++A + E+ W+ LL E ++ T P ++CD+ + + + +N +
Sbjct: 1352 KKQNMASSSSAESEYRAMAMGSREIAWLVKLLAEFQVKQTKPVPLFCDSTAAIHIANNAV 1411
Query: 1547 LHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLKDKLNVV 1604
H RTKH+E D R++++ L HV + Q AD+ TK L PT F L K++++
Sbjct: 1412 FHERTKHIENDCHITRDRIEQGMLKTMHVDTTSQLADVLTKPLFPTLFNSLIGKMSLL 1469
Score = 54.3 bits (129), Expect = 3e-05
Identities = 40/191 (20%), Positives = 91/191 (46%), Gaps = 27/191 (14%)
Query: 31 LDDSNFYSWKQQVEGVIRSHKLQKFVQDP-PMIPEKFLTEEDKITENVNPLFADWEQQDS 89
LD +NF SWK + + + FV P PE +P F W + +S
Sbjct: 81 LDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPES------------DPSFRVWSRCNS 128
Query: 90 LLFTWLLSTLSPAILPNVIQCVHSYQVWEEIHSFFNAKSRAQSTQLRNELKNITKGTKTA 149
++ +W+L++++ I ++++ + ++W+++ + F+ + +S QL ++ ++ +GT +
Sbjct: 129 MVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSL 188
Query: 150 SEFLQRIKTIVNTLASIGEPVTFR------------DHLEAI--FDGLSEEYSALMTVIY 195
S++ +KT+ + L T + +H + + GL+E YS + + I
Sbjct: 189 SDYYTALKTLWDDLDGASCVSTCKNCTCCIATASMIEHSKIVKFLSGLNESYSTIRSQII 248
Query: 196 NQTTYFTISEV 206
+ T ++E+
Sbjct: 249 MKKTIPDLAEI 259
>UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 626 bits (1615), Expect = e-177
Identities = 362/965 (37%), Positives = 518/965 (53%), Gaps = 70/965 (7%)
Query: 682 YDLWHSRLGHPHHDVLKQTLSLCNISVPSNKSVFSFCKACCLSKLHR--LPSSSSNTVYN 739
Y+LWHSR+GHP V+ + ++SV S+ + C C +K R P S + T+
Sbjct: 389 YELWHSRMGHPAARVVS-LIPESSVSV-SSTHLNKACDVCHRAKQTRNSFPLSINKTL-- 444
Query: 740 TPFELVFADLWGPASLESSCGFLYFLTCVDACTKYTWVFPLKKKSDTCATFINFQAMVEL 799
FEL++ DLWGP S G YFLT +D ++ W++ L KS+ NF AM +
Sbjct: 445 RIFELIYCDLWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDR 504
Query: 800 QFGHKLKSVQTDGGGEFKPLTSHFQKLGIIHRLTCPHTHHQNGSVERKHRHIVETGLALL 859
QF K+K+V++D G EF LT FQ+ G+IH +C T +N VERKHRH++ AL
Sbjct: 505 QFNVKIKTVRSDNGTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALR 564
Query: 860 SHASMPLQFWDHAFLAATYLINRMSTTTLQGASPYFKLYGQYPDFKSLKVFGSACFPFLR 919
A++P+QFW L A YLINR ++ L ++PY +L+ + P F L+VFGS C+ R
Sbjct: 565 FQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNR 624
Query: 920 PYNSNKLSLHSKECVFIGYSINHKGYKCLD-QSGRIYISKDVLFHEHRFPYPILFPTDHS 978
+K + S+ CVF+GY KG++ D + ++S+DV+F E FP+ I H
Sbjct: 625 NRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRI----SHE 680
Query: 979 SSSSAEFYPLSTIPIIS----------HTAPPSSPVLAASG-----------HSSPGPQD 1017
+ E PI+ A P+ P+ +S HS+ P D
Sbjct: 681 QNVIEEEEEALWAPIVDGLIEEEVHLGQNAGPTPPICVSSPISPSATSSRSEHSTSSPLD 740
Query: 1018 SPQQQQPPSATLSADDPS---------------TSTPAVVSPPVPSSSAQSADTSASVVA 1062
+ P ++T SA PS T+ AV P VP QS A V
Sbjct: 741 TEVVPTPATSTTSASSPSSPTNLQFLPLSRAKPTTAQAVAPPAVPPPRRQSTRNKAPPVT 800
Query: 1063 AAPPVIVNTHPMQTRAKNGIVKPRLQPTLLLTHLEPTSVKQAMKDVKWYKAMQEEYTAL- 1121
V+ T ++ +K + +LQ D + + A Y A+
Sbjct: 801 LKDFVVNTTVCQESPSKLNSILYQLQKR---------------DDTRRFSASHTTYVAID 845
Query: 1122 --MNNGTWTLVPLPANRTPVGCKWIYRIKENPDGSINKYKARLVAKGYSQVQGFDYSETF 1179
N TWT+ LP + +G +W+Y++K N DGS+ +YKARLVA G Q +G DY ETF
Sbjct: 846 AQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETF 905
Query: 1180 SPVVKPITVRLILSLAISRGWPLQQLDVNNAFLNGVLEEEVYMVQPPGFEHKDKNLVCKL 1239
+PV K TVRL L +A+ R W + Q+DV+NAFL+G L EEVYM PPGFE N VC+L
Sbjct: 906 APVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRL 965
Query: 1240 QKALYGLKQAPRAWFHRLKEVLIRFGFQASKCDPSLFTYYSSQGCIYMLVYVDDIIITGA 1299
+KALYGLKQAPR WF +L L R+GFQ S D SLFT I +L+YVDD+IITG
Sbjct: 966 RKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDDLIITGN 1025
Query: 1300 SMSLIQQLTAQLHSIFALKQLGQLDYFLGVQVTHLSNGNLLLNQTKYISDLLTKVNMLDA 1359
S QQ L S F +K LG L YFLG++V + G + + Q KY D++++ +L
Sbjct: 1026 SQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTG-IYICQRKYALDIISETGLLGV 1084
Query: 1360 AAISTPMQCGVKLSKNEGSALKDPTEYRSVVGALQYATITRPEISFAVNKVCQFMAQPHE 1419
+ P++ KL + L DP YR +VG L Y +TR +++F+V+ + +FM +P E
Sbjct: 1085 KPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPRE 1144
Query: 1420 EHWKAVKRILRYLKGTLTHGILLQPCSMTRPLPLIAYCDADWGSDPDDRRSTSGSCVFLG 1479
+HW A R++RYLK G+ L+ + + +CD+DW DP RRS +G V G
Sbjct: 1145 DHWAAALRVVRYLKADPGQGVFLR---RSGDFQITGWCDSDWAGDPMSRRSVTGYFVQFG 1201
Query: 1480 YNLISWTAKKQSLVARSSTEAEYRSLANTTAELLWVQSLLTELKIPFTIPTVY-CDNMST 1538
+ ISW KKQ V++SS EAEYR+++ +ELLW++ LL L + P + CD+ S
Sbjct: 1202 DSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSA 1261
Query: 1539 VILTHNPILHTRTKHMEMDIFFVREKVQDKSLLVQHVPSEHQKADIFTKALSPTRFLLLK 1598
+ + NP+ H RTKH+E+D FVR++ + +HV + Q ADIFTK L F +
Sbjct: 1262 IYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCFSAFR 1321
Query: 1599 DKLNV 1603
KL +
Sbjct: 1322 IKLGI 1326
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,774,482,088
Number of Sequences: 2790947
Number of extensions: 124405280
Number of successful extensions: 765595
Number of sequences better than 10.0: 4441
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 2889
Number of HSP's that attempted gapping in prelim test: 699930
Number of HSP's gapped (non-prelim): 41399
length of query: 1615
length of database: 848,049,833
effective HSP length: 141
effective length of query: 1474
effective length of database: 454,526,306
effective search space: 669971775044
effective search space used: 669971775044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0365.13