
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.9
(569 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9SH74 Putative replication protein A1 [Arabidopsis th... 115 3e-24
UniRef100_Q9C8B2 Hypothetical protein F10O5.9 [Arabidopsis thali... 114 1e-23
UniRef100_Q9LTU1 Replication protein A1-like [Arabidopsis thaliana] 102 2e-20
UniRef100_Q9C926 Putative replication protein; 94555-97079 [Arab... 96 2e-18
UniRef100_Q5XVE7 Hypothetical protein [Arabidopsis thaliana] 84 8e-15
UniRef100_Q9ZUF9 Putative replication protein A1 [Arabidopsis th... 81 9e-14
UniRef100_Q9S9S4 F28J9.5 [Arabidopsis thaliana] 79 3e-13
UniRef100_Q9ZQQ8 Putative replication protein A1 [Arabidopsis th... 75 7e-12
UniRef100_Q8LMZ9 Putative replication protein [Oryza sativa] 73 3e-11
UniRef100_Q9LX59 Hypothetical protein F4M19_70 [Arabidopsis thal... 69 3e-10
UniRef100_O82606 T2L5.8 protein [Arabidopsis thaliana] 67 1e-09
UniRef100_Q9FVZ6 Putative replication protein [Oryza sativa] 67 1e-09
UniRef100_Q8LRG4 B1008C01.13 protein [Oryza sativa] 64 9e-09
UniRef100_Q9ZUG2 Putative replication protein A1 [Arabidopsis th... 64 2e-08
UniRef100_Q9M251 Hypothetical protein F7M19_110 [Arabidopsis tha... 62 3e-08
UniRef100_Q9S9Y1 F14G16.2 protein [Arabidopsis thaliana] 61 8e-08
UniRef100_Q9S9X2 F28D6.17 protein [Arabidopsis thaliana] 61 1e-07
UniRef100_Q9MBH0 Replication protein-like [Arabidopsis thaliana] 60 1e-07
UniRef100_Q94DN4 P0483G10.9 protein [Oryza sativa] 60 2e-07
UniRef100_Q9M1K7 Hypothetical protein F18P9_140 [Arabidopsis tha... 60 2e-07
>UniRef100_Q9SH74 Putative replication protein A1 [Arabidopsis thaliana]
Length = 458
Score = 115 bits (289), Expect = 3e-24
Identities = 91/375 (24%), Positives = 159/375 (42%), Gaps = 58/375 (15%)
Query: 41 SLDMVLVDSKGDKIHATVRKTLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKIN 100
+ DMVL D +G KIHA+V++ + RF+ L+ G I FG+ + F+ T H +K+
Sbjct: 6 TFDMVLSDVRGKKIHASVKREHLNRFERLIVPGEWRAIENFGLTYATGQFKATDHRYKMG 65
Query: 101 FQIHTFVCVVTNTPINHSPY-SFMAISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGV 159
F T V V P++ S + S A ++++ + ++LIDV+G + +
Sbjct: 66 FMAQTRV--VRIDPLSDSYFLSLTAFNDVLNGGLNQNYLIDVVGQIVNVGEMETIDVHNQ 123
Query: 160 SQKKITLEL---------------------------------------------DQDGIH 174
KKI EL D I
Sbjct: 124 PTKKIDFELRDQKDERLPCTLWGSFAEQVFTACEAANGEMIICLVRFAKLKTYKDVRSIS 183
Query: 175 NVYGATKILFNPAIDEATKIRERNDPASQVLSQLQDSGMIYVEE----DLLRQTDGKTIE 230
N + ++IL NP + E + ++ L+ ++ ++E D Q KTI+
Sbjct: 184 NAFNTSQILINPDLPEILEFKDALPKDCLALTLIESKPKSKIDEFPTGDFYLQFAKKTIK 243
Query: 231 QIKDLTEKSYCVVLGTMKYIPDGMDWYYPACK-CSKKVYPA-----DGMYFCEACNRHVA 284
++ ++ + VL T+ I WYY CK C+KKV +CE C +
Sbjct: 244 EVSEMFDVGRVKVLCTIYDIDRDWSWYYIVCKKCNKKVTKVVMTSLKAQLWCETCRAPIT 303
Query: 285 SPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDL 344
+ L ++++ ++VM+S +LFD ++ +V P L+D S D +P I +L
Sbjct: 304 NVLARYKLHVKVMDSSGEMKLMLFDAMSSEIVGCPANNLLDGSFDEIEDPDILPDSIKNL 363
Query: 345 IDRTFLFKIEVSNSS 359
I +T+ + + V N +
Sbjct: 364 IGKTYQYLVCVENEN 378
>UniRef100_Q9C8B2 Hypothetical protein F10O5.9 [Arabidopsis thaliana]
Length = 567
Score = 114 bits (284), Expect = 1e-23
Identities = 101/431 (23%), Positives = 177/431 (40%), Gaps = 55/431 (12%)
Query: 1 MSGKIYVISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRK 60
M+ + + P K W + K+ W Y S ++++V+ D G K+HATV+K
Sbjct: 1 MAATFAYLKDVRPYKNAWRVQVKILHSWKQ---YTSNTRETIELVISDEHGKKMHATVKK 57
Query: 61 TLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPY 120
L+ +F L G I FG+ + FR T H +K+ FQ+ T V + ++ S +
Sbjct: 58 ELVSKFVHKLIVGEWVFIEIFGLTYASGQFRPTNHLYKMAFQVRTEVMGCAS--VSDSNF 115
Query: 121 SFMA-ISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLEL-DQ-------- 170
+A S+I + + L+D IG + E + + KI E+ DQ
Sbjct: 116 LTLASFSKIQSGELNPHMLVDAIGQIITVGELEELKANNKRTTKIDFEIRDQMDERMQVT 175
Query: 171 ------------------------DGIHNVYGATKILFNPAIDEATKIRER--NDPASQV 204
+ N + A+++ NP E + ND A V
Sbjct: 176 LWGTYAQEVYRACQESEGKNTASVKSLSNSFDASQVHVNPDFPEVHDFSQTLLNDGAICV 235
Query: 205 L-SQLQDSGMIYVEEDLLRQTDGKTIEQIKDLTEKSYCVVLGTMKYIPDGMDWYYPACK- 262
+++ M+ V+ + TIE + TE VL T+ + WYY +CK
Sbjct: 236 FRARVPRFEMVAVKRTDYSEYTRNTIENLLSSTEVGKVRVLCTIYAVDTDWAWYYISCKT 295
Query: 263 CSKKVYPADG------------MYFCEACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQ 310
C+KKV ++C+ C V + + ++ I +VM+S A +LFD
Sbjct: 296 CNKKVNHIHAGVNGVNNKGKKPRFWCDTCTSVVTNVVSRYMIYAKVMDSTGEAKLLLFDS 355
Query: 311 EANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRTFLFKIEVSNSSNSIYEPSYRVK 370
+ ++ + A + + S D ++P + +LI +TFLF + V + + Y+V
Sbjct: 356 ICSEIIGESAASVFNGSVDEIDDPEDLPDSVKNLIGKTFLFLVCVEKDNILDGKEIYKVS 415
Query: 371 KFCYDPEIINQ 381
K +I +
Sbjct: 416 KVLLKDGLIEE 426
>UniRef100_Q9LTU1 Replication protein A1-like [Arabidopsis thaliana]
Length = 581
Score = 102 bits (255), Expect = 2e-20
Identities = 94/443 (21%), Positives = 176/443 (39%), Gaps = 86/443 (19%)
Query: 1 MSGKIYVISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRK 60
M+ ++ + P K +W + K W Y + +L++V D G KIH +VRK
Sbjct: 1 MAATFGYLTDVRPYKTSWRVQVKTLHAWRQ---YTANTGETLEVVFSDETGKKIHCSVRK 57
Query: 61 TLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPY 120
L+ ++ ++LT G I F + +G FR T H +K++F T V+ + ++ S Y
Sbjct: 58 DLVSKYANMLTVGEWVFIETFSLNYAGGSFRPTSHLYKMSFVNGT--SVIPSPSVSDSNY 115
Query: 121 SFMAISE-IMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLEL----------- 168
+A E I + + + L+DVIG + E E + KI ++
Sbjct: 116 LTLATFEKIQSGELNPTMLVDVIGQIVMIGELEELEANNKPTTKIDFDIRDASDERIGVT 175
Query: 169 -------------------------------DQDGIHNV---YGATKILFNPAIDEATKI 194
G+ N+ + A+++ NP E
Sbjct: 176 LWGTFAQQVYRGCNEAGARPVVCVLRFVKIKSYKGVRNLSNSFDASQVFVNPQFPEVDAF 235
Query: 195 -------------RERNDPASQVLSQLQDSGMIYVEEDLLRQTDGKTIEQIKDLTEKSYC 241
RER V+S+ DS + Y TI+Q+ + +
Sbjct: 236 LRTLPQDGILLTYRERIPKLEIVVSKKSDSCLEYPR---------NTIQQLLNAVDVGKA 286
Query: 242 VVLGTMKYIPDGMDWYYPACK-CSKKVYPADG------------MYFCEACNRHVASPLY 288
++ T+ I WYY +C+ C+KKV ++C++C V + +
Sbjct: 287 RLMCTIYAIDTDWAWYYISCRACNKKVTHIHSGVHGVNNKGKKPRFWCDSCKTVVTNVIA 346
Query: 289 KFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRT 348
++ I +VM++ + +LFDQ ++ + +++ S D ++P + +L +T
Sbjct: 347 RYMIYAKVMDNTGESKLLLFDQICTEIIGETAPSVLNGSVDEIDDPDDLPDALKNLYGKT 406
Query: 349 FLFKIEVSNSSNSIYEPSYRVKK 371
FLF + + + + Y+V K
Sbjct: 407 FLFLVSIEKENIWDGKEIYKVTK 429
>UniRef100_Q9C926 Putative replication protein; 94555-97079 [Arabidopsis thaliana]
Length = 566
Score = 96.3 bits (238), Expect = 2e-18
Identities = 91/427 (21%), Positives = 171/427 (39%), Gaps = 76/427 (17%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
I + P K +W I K+ W + Y S +M+L D G+KI A ++K + + Q
Sbjct: 10 IKNLKPFKTSWCIQVKILHAW---NHYTKGSGMSYEMMLADEDGNKIQAGIKKEHLLKLQ 66
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSP-------Y 120
+ G I F V ++ +R+T H ++IN Q ++T ++SP
Sbjct: 67 RYVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQ--------SSTRFSNSPTISDEIWL 118
Query: 121 SFMAISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLELDQ---------- 170
+ ++++ D + L++VIG L + G KKI +L
Sbjct: 119 DLVNFNDVLSGTLDQNKLVNVIGQLVNVGEIQLLDVQGKPTKKIDFQLRDTDDNRLPCSL 178
Query: 171 -----DGIH------------------------------NVYGATKILFNPAIDEATKIR 195
D IH N + A+++ NP + E + +
Sbjct: 179 WGKFADQIHKVSKESVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEEFK 238
Query: 196 ERNDPASQVLSQLQDSGM---IYVEEDLLRQTDGKTIEQIKDLTEKSYCVVLGTMKYIPD 252
L+ ++ + V E+ +Q + KTI ++K E ++ ++ I
Sbjct: 239 NLLPSDGLALTIMEPKPRFQPLRVREERSKQFERKTIAELKASFEVEKVKIICSILSIDL 298
Query: 253 GMDWYYPA-CKCSKKVYPADG---------MYFCEACNRHVASPLYKFRIQLRVMNSKNT 302
WYY A KC+KKV+ + +Y C+ C V S ++ + L +M++
Sbjct: 299 DYSWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIMDNTGE 358
Query: 303 ATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRTFLFKIEVSNSSNSI 362
+ +LFD ++ P L+D +N+ + +P + ++I +T+ F + V + S
Sbjct: 359 SKLMLFDSFVEPIIGCPATELLDVTNEQIDEPQPLPDVVKNIIGKTYQFLVCVEQDNISR 418
Query: 363 YEPSYRV 369
Y+V
Sbjct: 419 GNDEYKV 425
>UniRef100_Q5XVE7 Hypothetical protein [Arabidopsis thaliana]
Length = 364
Score = 84.3 bits (207), Expect = 8e-15
Identities = 76/299 (25%), Positives = 132/299 (43%), Gaps = 33/299 (11%)
Query: 179 ATKILFNPAIDEATKIRE---RNDP-ASQVLSQLQDSGMIYVEEDLLRQTDGKTIEQIKD 234
+TK+ N +I E T+ +E ++D A +S + S + D KTI D
Sbjct: 38 STKLFINSSIAEITEFKESLAKSDCLALTTISTITSSSSSKHSKPSFSLRDQKTIA---D 94
Query: 235 LTEKSYCVVLGTMKYIPDGMDWYYPACK-CSKKVYP---------ADGMYFCEACNRHVA 284
+ C ++ ++ I + W+Y C C KKV P G Y CE C+ V
Sbjct: 95 INSGGACNIIASIFSIDTKVPWFYIGCNICFKKVSPYFNPETEEIEAGKYECEKCDTFVT 154
Query: 285 SPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDL 344
+ +FR+Q+ V++ A+F+LFDQ+ ++ K L++ + S +P ++LDL
Sbjct: 155 TTSTRFRVQVTVLDHTGEASFLLFDQDVIKLIHKSTYELLEQQVQFN-RSDKIPQELLDL 213
Query: 345 IDRTFLFKIEVSNSSNSIYEPSYRVKKFCYDPEIINQFISNSPHLMYDESNPFYFLATPT 404
R F+F I+ S+S+ +RV + PEI+ +F N L + ++P + +
Sbjct: 214 EGRQFVFTIQGSDSTKFSRPSIFRVYELTDKPEIVQKFQENL--LQMNTTDPNTHMVSSF 271
Query: 405 SVLKQESINPEISKDLNVEFAVAGELPNTDSPPASAVDLGCDTQNLSFDGGSSDMSGIK 463
S P+ D+N+ S P++A DT++ + S IK
Sbjct: 272 SNSTTSETEPD--SDMNIV-----------STPSNATTNQIDTESSEAANYENSNSSIK 317
>UniRef100_Q9ZUF9 Putative replication protein A1 [Arabidopsis thaliana]
Length = 456
Score = 80.9 bits (198), Expect = 9e-14
Identities = 100/425 (23%), Positives = 166/425 (38%), Gaps = 67/425 (15%)
Query: 34 YGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQSLLTEGRVYQISFFGVGESGRDFRTT 93
Y K S+ M+LVD GDK++A VR+ I +F+ +TEG I+ + + +R +
Sbjct: 7 YSVKAGESIKMILVDKAGDKMYAAVRREQIKKFERCVTEGVWKIITTITLNPTSDQYRIS 66
Query: 94 GHAFKINFQIHTFVCVVTNTPINHSPYSFMAISEIMFNDPDASFLIDVIGILTGASGEHE 153
+KI F T V +T + S I+ +++ L DV+G + S +
Sbjct: 67 DLKYKIGFVFKTTVS-PCDTVSDSLFLSLAKFDVILSGSTNSNILHDVMGQVIDRSEIQD 125
Query: 154 FEKDGVSQKKITLEL-DQDGIH---NVYGATKILFNPAIDEAT-----------KIRERN 198
+ KKI L DQ ++G + + A E+T KI N
Sbjct: 126 LNANNKPTKKIDFHLRDQHDTRLACILWGKYAEIVDKACQESTDGIVVCLIRFAKINLYN 185
Query: 199 DPASQVLSQLQDSGMIYV-----EEDLLRQ---TDG------------------------ 226
D S +S D ++V E DL +Q TDG
Sbjct: 186 DTRS--VSNFFDVSQVFVDPTLAELDLFKQSIPTDGLTLGSSGSFHKRLYAPRTGDDDGD 243
Query: 227 ---KTIEQIKDLTEKSYCVVLGTMKYIPDGMDWYYPACKC-SKKV------------YPA 270
+TI+++ ++ C + T+ I YY C+ +KKV P
Sbjct: 244 YPRQTIKEVLTSSDVGKCKTVCTVSAIDTDWPCYYFCCRAHNKKVVKEEAIKLEDVKQPQ 303
Query: 271 DGMYFCEACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKA 330
++CE CN S + KF + L +M+ + A +LFD A ++ L+D S
Sbjct: 304 KPRFWCEICNGFAKSVVAKFCLHLHIMDQTDEARCMLFDSHAKEILGTTAPQLLDGSFDE 363
Query: 331 GPDSPNVPSDILDLIDRTFLFKIEVSNSSNSIYEPSYRVKKFCYDPEIINQFISNSPHLM 390
D +P I L +TF F + + + S+ V + Y I+++ +
Sbjct: 364 IEDPTVLPDVINGLKGKTFQFLLCIQRENIFGGYDSFTVAR-VYTGNIVDEIVQEDSDAY 422
Query: 391 YDESN 395
D S+
Sbjct: 423 VDPSS 427
>UniRef100_Q9S9S4 F28J9.5 [Arabidopsis thaliana]
Length = 483
Score = 79.3 bits (194), Expect = 3e-13
Identities = 103/488 (21%), Positives = 189/488 (38%), Gaps = 92/488 (18%)
Query: 1 MSGKIYVISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRK 60
+S + INP+ + + I +V RLW +L S++MVLVD +G ++HA++ +
Sbjct: 5 LSNSFVYLREINPALDQYKIKVRVVRLW--------RLFKSIEMVLVDGEGTRVHASIEE 56
Query: 61 TLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPY 120
L RFQ G I F D+RT+ +FKI F T V N P
Sbjct: 57 GLGKRFQHQFVSGESRIIDTFSFVYYDGDYRTSPLSFKIVFYRTTTVKPCDNFPSQAPDK 116
Query: 121 SFMAISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLELDQDGIHNVYGAT 180
F +EI+ D LIDV+G + + G +D ++ + +
Sbjct: 117 YFKEFNEILSGRLDRQILIDVLGQIVDVGSLDSIKAKG-----------KDTVNKKWPSF 165
Query: 181 KILF--NPAIDEATKIRERNDPA------------------SQVLSQLQDSGMIYVE--- 217
++ + + AI+ ++ + N+P ++ +I+V+
Sbjct: 166 RVYYMGDLAINFSSYFKNNNEPVIVCVVRFACIKEWKGNIFDIIMLSAGSEDLIHVDSEN 225
Query: 218 ----------EDLLRQTDGKTIEQIKDLTE----KSYCVVLGTMKYIPDGMDWYYPACK- 262
E+ + + KT+E I + S + GT+ ++ + + K
Sbjct: 226 KTSHSAVTLYEEFFQLNEKKTVEDIVYACDPESVSSRLCLNGTILHVKYVVRRFSRIHKV 285
Query: 263 CSKKVY-PADGMYFCEACNRH--------------VASPLYKFRIQLRV-MNSKNTATFV 306
C KK + A + C C+ ++ LY++++ LR + +
Sbjct: 286 CGKKAHGDAGPICSCGVCDADATDVSYSVVYLLIMMSLDLYRYKLILRASYGASPEVKLL 345
Query: 307 LFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRTFLFKIEVSNSSNSIYEPS 366
FD A ++ K A K D +P + DL+ +T LFK+ + + + +
Sbjct: 346 FFDGLAQCLIGKTAAEFFAEVPKES-DPSILPEVLADLMGKTMLFKLSIGTDNLKSTKAA 404
Query: 367 YRVKKFCYDPEIINQFISNSPHLMYDESNPFYFLATPTSVLKQESINPEISKDLNVEFAV 426
Y V+KF +++ +F T S + INP+I +E +V
Sbjct: 405 YVVEKFWEKTDMVEKFAKE---------------LTVVSDSACDIINPKIEM---IESSV 446
Query: 427 AGELPNTD 434
+ P+TD
Sbjct: 447 VDDSPSTD 454
>UniRef100_Q9ZQQ8 Putative replication protein A1 [Arabidopsis thaliana]
Length = 527
Score = 74.7 bits (182), Expect = 7e-12
Identities = 81/336 (24%), Positives = 133/336 (39%), Gaps = 47/336 (13%)
Query: 54 IHATVRKTLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNT 113
+HA V+K L+ +F L G I FG+ + FR T H +K+ F + T V +
Sbjct: 1 MHAIVKKELVSKFVHKLLVGEWVFIEIFGLTYASGQFRPTNHLYKMAFHVRTKVMGCAS- 59
Query: 114 PINHSPYSFMA-ISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLELDQDG 172
++ S + +A S+I + + L+D IG + E E + KI E+
Sbjct: 60 -VSDSNFLTLAPFSKIQSGELNPHMLVDAIGQIITVGELEELEANNKPTTKIDFEI---- 114
Query: 173 IHNVYGATKILFNPAIDEATKIRERNDPASQVLSQLQDSGMIYVEEDLLRQTDGKTIEQI 232
+DE ++ A QV Q+S Q G T
Sbjct: 115 ------------RDQMDERMQVTLWGTYAQQVYRACQESEGKNSHVLRWLQLKGLTTVST 162
Query: 233 KDLTEKSYCV----VLGTMKYIPDGMDWYYPACK-CSKKVYPADG------------MYF 275
+ + K C+ VL T+ I WYY CK C+KKV ++
Sbjct: 163 QGIPLK-ICLARLRVLCTIYAIDTDWAWYYINCKTCNKKVNHIHAGVNGVNNKGKKPRFW 221
Query: 276 CEACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSP 335
CE C V + V++S A +LFD + ++ + +++ S D
Sbjct: 222 CETCKSFVTN----------VVSSTGEAKLLLFDSICSEIIGEYATSVLNGSVDEIEDPE 271
Query: 336 NVPSDILDLIDRTFLFKIEVSNSSNSIYEPSYRVKK 371
++P + +LI +TFLF + V + S + Y+V K
Sbjct: 272 DLPDSVKNLISKTFLFLVWVEKDNISDGKEIYKVSK 307
>UniRef100_Q8LMZ9 Putative replication protein [Oryza sativa]
Length = 276
Score = 72.8 bits (177), Expect = 3e-11
Identities = 56/182 (30%), Positives = 88/182 (47%), Gaps = 6/182 (3%)
Query: 20 IVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQSLLTEGRVYQIS 79
++A+V RLW + + +D+VLVD KG IHA + LI F+ LL EG+VY +
Sbjct: 18 LLARVSRLWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLIQVFKPLLAEGKVYYLD 77
Query: 80 FFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSP--YSFMAISEIM-FNDPDAS 136
+ V S + +R + + F T V + P N YS ++E+ F D + S
Sbjct: 78 SYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNES 137
Query: 137 FLIDVIGILTGASGEHEF--EKDGVSQKKITLELDQDGIHNVYGATKILFNPAIDEATKI 194
F +DVIG +T S + VS K T+++ I + K+L PA + A +I
Sbjct: 138 F-VDVIGFITEISTPTMLRPKSRDVSSLKRTVQICDTKIGANFQPIKLLQAPATNIADEI 196
Query: 195 RE 196
+
Sbjct: 197 AD 198
>UniRef100_Q9LX59 Hypothetical protein F4M19_70 [Arabidopsis thaliana]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10
Identities = 69/278 (24%), Positives = 118/278 (41%), Gaps = 41/278 (14%)
Query: 173 IHNVYGATKILFNPAIDEATKIRER--NDPASQVLSQLQDSGMIYVEEDL-----LRQTD 225
+ N + T++ NP EA ++ +D S + + Q + V +D+ LR +
Sbjct: 139 LSNSFDVTQVHVNPPSSEAVFFQQALPSDGLSLISRERQPRWEMVVNKDVDWLDYLRNS- 197
Query: 226 GKTIEQIKDLTEKSYCVVLGTMKYIPDGMDWYYPACK-CSKKVYPADG------------ 272
I +K E VL T+ I WYY +CK C+KKV
Sbjct: 198 ---ISDLKCSIEIGKARVLCTIYAIDTDWAWYYISCKTCNKKVNHIHAGVHGVNNKGKKP 254
Query: 273 MYFCEACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGP 332
++C+ C V + + ++ + VM++ A F+LFD + + + ++D S
Sbjct: 255 RFWCDTCKTVVTNVIPRYMLYANVMDNTGEAKFLLFDSICSELTGESATSVLDGSLDEVV 314
Query: 333 DSPNVPSDILDLIDRTFLFKIEVSNSSNSIYEPSYRV-KKFC-----------YDPEIIN 380
D N+P + +LI +TFLF + V S + Y+V K C Y +I+N
Sbjct: 315 DPENLPEPVKNLIGKTFLFLVWVEKEHISDGKEVYKVWKVLCKGGLLEEQLLEYSADIVN 374
Query: 381 QF---ISNSPHLMYDESNPFYFLATPTSVLKQESINPE 415
++ P LM + S+ TP+S K+ NP+
Sbjct: 375 PASIESADQPQLMLENSHDTSDFGTPSS--KRIYANPD 410
>UniRef100_O82606 T2L5.8 protein [Arabidopsis thaliana]
Length = 1073
Score = 67.4 bits (163), Expect = 1e-09
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 173 IHNVYGATKILFNPAIDEATKIRER--NDPASQVL-SQLQDSGMIYVEEDLLRQTDGKTI 229
+ N + A+++ NP EA + ND A V +++ M+ V+ TI
Sbjct: 191 LSNSFDASQVHVNPDFPEAHHFSQTLPNDGAICVYRTRVPRFEMVAVKRIDYSVYTRNTI 250
Query: 230 EQIKDLTEKSYCVVLGTMKYIPDGMDWYYPACK-CSKKVYPADG------------MYFC 276
E + TE VL T+ I WYY +CK C+KKV ++C
Sbjct: 251 EDLLSSTEVGKVRVLCTIYAIDTDWAWYYISCKTCNKKVNHIHAGVNGVNNKGKKPKFWC 310
Query: 277 EACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPN 336
+ C V + + ++ I +VM+S + A VLFD ++ + +++ S D +
Sbjct: 311 DTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICFEIIGESATSVLNGSVNEIEDPED 370
Query: 337 VPSDILDLIDRTFLFKIEVSNSSNSIYEPSYRVKK 371
+P + +LI +TFLF + V + S + Y+V K
Sbjct: 371 LPDSVKNLIGKTFLFLVWVEKDNISDGKEIYKVSK 405
Score = 47.0 bits (110), Expect = 0.001
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 54 IHATVRKTLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNT 113
+HATV+K L+ +F L G I F + + FR T H +K+ FQ+ T V +
Sbjct: 1 MHATVKKELVSKFVHKLIVGEWVFIEIFRLTYASSQFRPTNHLYKMAFQVRTEVMGCAS- 59
Query: 114 PINHSPYSFMA-ISEIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLEL 168
++ S + +A S+I + + L+D IG + E E + KI E+
Sbjct: 60 -VSDSNFLTLAPFSKIQSGELNPHMLVDAIGQIITVGELEELEANNKPTTKIDFEI 114
>UniRef100_Q9FVZ6 Putative replication protein [Oryza sativa]
Length = 867
Score = 67.4 bits (163), Expect = 1e-09
Identities = 74/372 (19%), Positives = 141/372 (37%), Gaps = 73/372 (19%)
Query: 7 VISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRF 66
++S + + I +V RLW + L +VL+D + F
Sbjct: 5 MLSKLELCADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQE---------------F 49
Query: 67 QSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPYSFMAIS 126
+ ++TEG+VY + ++ V E R +R ++ I F T + N + + +
Sbjct: 50 REIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTSDT----ILNVALWGERATSFPVD 105
Query: 127 EIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLELDQ-----DGIHNVYGATK 181
E++ + +G L G+ + + I + + + I Y K
Sbjct: 106 EVVAAGQKEPQIAIFVGTLVRGYGDISLSGNSACKWYINVNTPEVNSFKESIQGKYEPIK 165
Query: 182 ILFNPAIDEATKIRERNDPASQVLSQLQDSGMIYVEEDLLRQTDGKTIEQIKDLT----E 237
++ PA+ E+ K+I QIKDL
Sbjct: 166 MIELPAVGAVRTGAEQ-----------------------------KSIAQIKDLNPFMFR 196
Query: 238 KSYCVVLGTMKYIPDGMDWYYPACKCSKKVYPADGMYFCEACNRHVASPLYKFRIQLRVM 297
K+ +V +K I W+YPAC K+ G Y+F++ L
Sbjct: 197 KNEFMVTVVIKKIDTESSWWYPACDSCKRTAKPYG-------------KSYRFKLSLIAG 243
Query: 298 NSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRTFLFKIEVSN 357
+ FVLF + A ++ +P +L+ +N AG + +P +I DL+++ F + + +
Sbjct: 244 DDTGDTKFVLFGRTAQRIIGRPVEMLIQ-NNPAGIEF--IPKEITDLLEKEFTWNVAFTE 300
Query: 358 SSNSIYEPSYRV 369
++ S S++V
Sbjct: 301 NTLSSSTVSFQV 312
>UniRef100_Q8LRG4 B1008C01.13 protein [Oryza sativa]
Length = 780
Score = 64.3 bits (155), Expect = 9e-09
Identities = 75/381 (19%), Positives = 142/381 (36%), Gaps = 74/381 (19%)
Query: 7 VISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRF 66
++S + + I +V RLW + L +VL+D + F
Sbjct: 5 MLSKLELGADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQE---------------F 49
Query: 67 QSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPYSFMAIS 126
+ ++TEG+VY + ++ V E R +R ++ I F T + N + + +
Sbjct: 50 REIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTSDT----ILNVALWGERATSFPVD 105
Query: 127 EIMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLELDQ-----DGIHNVYGATK 181
E++ + +G L G+ + + I + + + I Y K
Sbjct: 106 EVVAAGQKEPQIAIFVGTLVRGYGDISLSGNSACKWYINVNTPEVNSFKESIQGKYEPIK 165
Query: 182 ILFNPAIDEATKIRERNDPASQVLSQLQDSGMIYVEEDLLRQTDGKTIEQIKDLT----E 237
++ PA+ E+ K+I QIKDL
Sbjct: 166 MIELPAVGAVRTGAEQ-----------------------------KSIAQIKDLNPFMFR 196
Query: 238 KSYCVVLGTMKYIPDGMDWYYPACKCSKKVYPADGMYFCEACNRHVASPLYKFRIQLRVM 297
K+ +V +K I W+YPAC K+ G Y+ ++ L
Sbjct: 197 KNEFMVTVVIKKIDTESSWWYPACDTCKRTAKPYG-------------KSYRIKLSLIAG 243
Query: 298 NSKNTATFVLFDQEANSVVKKPCAILVDASNKAGPDSPNVPSDILDLIDRTFLFKIEVSN 357
+ FVLF + A ++ +P +L+ +N AG + +P +I DL+++ F + + +
Sbjct: 244 DDTGDTKFVLFGRTAQRIIGRPVEMLIQ-NNPAGIEF--IPKEITDLLEKEFTWNVAFTE 300
Query: 358 SSNSIYEPSYRVKKFCYDPEI 378
++ S S++ DP I
Sbjct: 301 NTLSSSTVSFQCSA-AADPSI 320
>UniRef100_Q9ZUG2 Putative replication protein A1 [Arabidopsis thaliana]
Length = 238
Score = 63.5 bits (153), Expect = 2e-08
Identities = 43/139 (30%), Positives = 70/139 (49%), Gaps = 6/139 (4%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
+S + S W I +V R +L + SK+ + ++L D G I ATV + ++
Sbjct: 7 LSLLKSSIRGWCIRGRVVRTFLVSLVPSSKV---MGLILADEHGMTIEATVGYKMSDHYK 63
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTP-INHSPYSFMAIS 126
+ EG I+ FGV E+ R T H+FKI F + T V + + P I H Y + S
Sbjct: 64 DFINEGEWVTITNFGVVENSGSVRATTHSFKIGFSVDTVVRLTSPVPAIPH--YRLASFS 121
Query: 127 EIMFNDPDASFLIDVIGIL 145
I+ ++ D S L+D++G +
Sbjct: 122 SIIDDEIDKSVLVDLVGAI 140
>UniRef100_Q9M251 Hypothetical protein F7M19_110 [Arabidopsis thaliana]
Length = 269
Score = 62.4 bits (150), Expect = 3e-08
Identities = 59/231 (25%), Positives = 102/231 (43%), Gaps = 27/231 (11%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
+ ++ P K W I K+ +W Y K S++M+LVD GDK++A VR+ I +F+
Sbjct: 12 LKSLKPYKNAWRIQVKLLHVWRQ---YSVKAGESIEMILVDEAGDKMYAAVRREQIKKFE 68
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPYSFMAISE 127
LTEG I+ + + +R + +KI F T V + S F+++++
Sbjct: 69 RCLTEGVWKIITTITLNPTSGKYRISDLKYKIGFVFKTTVSPCDSV----SDALFLSLAK 124
Query: 128 ---IMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLEL-DQDGIH---NVYGAT 180
I+ +++ L DV+G + S + + KKI L DQ ++G
Sbjct: 125 FDVILSGSANSNILHDVMGQVVDRSEIQDLNANNKPTKKIDFHLKDQHDTRLACTLWGKY 184
Query: 181 KILFNPAIDEAT-----------KIRERNDPASQVLSQLQDSGMIYVEEDL 220
+ + A E+T KI ND S+ +S D ++V+ L
Sbjct: 185 AEIVDQACQESTDGIVVCLIRFAKINLYND--SRSVSNSFDVSQVFVDPTL 233
>UniRef100_Q9S9Y1 F14G16.2 protein [Arabidopsis thaliana]
Length = 242
Score = 61.2 bits (147), Expect = 8e-08
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
+S + PS W I +V R +L + SK+ + ++L + G I ATV + ++
Sbjct: 7 LSLLKPSIRGWCIRGRVVRTFLVSLVPSSKV---MGLILAEEHGMTIEATVGYKMSDHYK 63
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTP-INHSPYSFMAIS 126
+ EG I+ FGV E+ R T H+FKI F + V + + P I H Y + S
Sbjct: 64 DFINEGEWVTITNFGVVENSGSVRATTHSFKIGFFVDIVVRLTSPLPAIPH--YRLASFS 121
Query: 127 EIMFNDPDASFLIDVIGIL 145
I+ ++ D S L+D++G +
Sbjct: 122 SIIDDEIDKSVLVDLVGAI 140
>UniRef100_Q9S9X2 F28D6.17 protein [Arabidopsis thaliana]
Length = 242
Score = 60.8 bits (146), Expect = 1e-07
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
+S + PS W I +V R +L + SK+ + ++L D G I TV + ++
Sbjct: 7 LSLLKPSITGWCIRGRVVRTFLVSLVPSSKV---MGLILADEHGMTIETTVGYKMSDHYK 63
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTP-INHSPYSFMAIS 126
+ EG I+ FGV E+ R T H FKI F + T V + + P I H+ + S
Sbjct: 64 HFINEGEWVTITSFGVVENSCSVRATTHTFKIGFSVDTVVRLTSLVPAILHN--RLASFS 121
Query: 127 EIMFNDPDASFLIDVIGIL 145
I+ ++ D S L+D++G +
Sbjct: 122 SIIDDEIDKSVLVDLVGAI 140
>UniRef100_Q9MBH0 Replication protein-like [Arabidopsis thaliana]
Length = 170
Score = 60.5 bits (145), Expect = 1e-07
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 8 ISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRKTLIYRFQ 67
+ ++ P K W I K+ +W Y K+ S++M+LV+ GDK++A VR+ I + +
Sbjct: 12 LKSLKPYKNAWRIQVKLLHVWRQ---YSVKVGESIEMILVNEVGDKMYAPVRREQIEKIE 68
Query: 68 SLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFVCVVTNTPINHSPYSFMAISE 127
LTEG I+ + + +R + +KI F T V +T + S
Sbjct: 69 RCLTEGVWKIITTITLNHTSGQYRISDLKYKIGFVFKTTVS-PCDTVFDALFLSLAKFDV 127
Query: 128 IMFNDPDASFLIDVIGILTGASGEHEFEKDGVSQKKITLEL 168
I+ +++ L DV+G + S + + S KKI L
Sbjct: 128 ILSGSANSNILHDVMGQVVDRSEIKDLNANNKSTKKIDFHL 168
>UniRef100_Q94DN4 P0483G10.9 protein [Oryza sativa]
Length = 501
Score = 59.7 bits (143), Expect = 2e-07
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 156 KDGVSQKKI-----TLELDQDGIH-NVYGAT--KILFNPAIDEATKIRERNDPASQVLSQ 207
KDG ++ ++ TL D GI + G++ K N I + K++E Q +
Sbjct: 247 KDGQTKPQVVVFVGTLVRDYAGIGLTITGSSPCKWYINLDIPDVLKLKESFSVNFQPIKW 306
Query: 208 LQDSGMIYVEEDLLRQTDGKTIEQIKDLTEKSY----CVVLGTMKYIPDGMDWYYPAC-K 262
++++ + ++ + KTI++I L Y +V T+K I D W+Y +C +
Sbjct: 307 VENAAPAFNQDT----PEEKTIKEILKLNPHKYKRARFIVNVTIKSIHDENCWWYNSCDR 362
Query: 263 CSKKVYPADGMYFCEACNRHVASPLYKFRIQLRVMNSKNTATFVLFDQEANSVVKKPCAI 322
C + P Y C +C ++ P+ ++++ L ++ + A FVLF + A+ ++ +P
Sbjct: 363 CCRTSKPYGSTYRCSSC-CYIGMPVPRYKVVLTTADNTSEAAFVLFGRIAHRLIHRPVES 421
Query: 323 LVDASNKAGPDSPNVPSDILDLIDRTFLFKI 353
L++ + PD +P++I L+D+ F++ +
Sbjct: 422 LIEEN---PPDF--IPAEIQALVDQAFVWNV 447
Score = 38.9 bits (89), Expect = 0.41
Identities = 26/101 (25%), Positives = 45/101 (43%), Gaps = 2/101 (1%)
Query: 51 GDKIHATVRKTLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINFQIHTFV--C 108
G+ IH + + I + L+ EG++Y I F V ++ R +R + F I F T + C
Sbjct: 88 GNSIHVQMYRGAIEVLKPLIHEGKIYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEEC 147
Query: 109 VVTNTPINHSPYSFMAISEIMFNDPDASFLIDVIGILTGAS 149
+ +S EI F +D++G++T S
Sbjct: 148 IDIPADFPTITFSLTHFQEIPSLVGKNIFYVDIMGVITEIS 188
>UniRef100_Q9M1K7 Hypothetical protein F18P9_140 [Arabidopsis thaliana]
Length = 303
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/101 (34%), Positives = 50/101 (48%), Gaps = 3/101 (2%)
Query: 1 MSGKIYVISTINPSKETWNIVAKVQRLWLSPSLYGSKLPFSLDMVLVDSKGDKIHATVRK 60
M+ + I P K +W I KV W Y S +L++VLVD+ G KIHA+V+K
Sbjct: 1 MAASFAFLRDIRPYKTSWRIQVKVFHSWRQ---YTSMTGETLELVLVDAHGVKIHASVKK 57
Query: 61 TLIYRFQSLLTEGRVYQISFFGVGESGRDFRTTGHAFKINF 101
L+ F + L I F + + FR TGH +K+ F
Sbjct: 58 DLVSNFVNNLLLNEWRFIETFALNHASGQFRPTGHLYKMTF 98
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.315 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 990,578,002
Number of Sequences: 2790947
Number of extensions: 43769726
Number of successful extensions: 115732
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 115559
Number of HSP's gapped (non-prelim): 205
length of query: 569
length of database: 848,049,833
effective HSP length: 133
effective length of query: 436
effective length of database: 476,853,882
effective search space: 207908292552
effective search space used: 207908292552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)
Lotus: description of TM0346.9