Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0162a.12
         (34 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q96539 10 kDa chaperonin [Brassica napus]                    53  3e-06
UniRef100_Q8LDC9 Putative 10kd chaperonin (Putative 10kDa chaper...    52  6e-06
UniRef100_Q42154 Relative to putative 10 kDa chaperonin homologu...    52  6e-06
UniRef100_Q9JI95 CPN10-like protein [Mus musculus]                     51  1e-05
UniRef100_Q64433 10 kDa heat shock protein, mitochondrial [Mus m...    51  1e-05
UniRef100_P34893 10 kDa chaperonin [Arabidopsis thaliana]              51  1e-05
UniRef100_P61604 10 kDa heat shock protein, mitochondrial [Homo ...    50  2e-05
UniRef100_Q6B894 Heat shock protein 10 [Ixodes pacificus]              50  2e-05
UniRef100_P26772 10 kDa heat shock protein, mitochondrial [Rattu...    50  2e-05
UniRef100_UPI000021F4E3 UPI000021F4E3 UniRef100 entry                  50  2e-05
UniRef100_UPI000017F810 UPI000017F810 UniRef100 entry                  50  2e-05
UniRef100_Q9DGM3 Chaperonin 10 [Brachydanio rerio]                     49  3e-05
UniRef100_Q6IQI7 Heat shock 10kD protein 1 [Brachydanio rerio]         49  3e-05
UniRef100_Q6DDD2 Heat shock 10kDa protein 1 [Xenopus tropicalis]       49  3e-05
UniRef100_UPI000046CD43 UPI000046CD43 UniRef100 entry                  49  4e-05
UniRef100_Q8I5Q3 10 kd chaperonin, putative [Plasmodium falciparum]    49  4e-05
UniRef100_Q7RKZ8 Chaperonin, 10 kDa [Plasmodium yoelii yoelii]         49  4e-05
UniRef100_UPI00003661A3 UPI00003661A3 UniRef100 entry                  49  5e-05
UniRef100_UPI000029BF93 UPI000029BF93 UniRef100 entry                  49  5e-05
UniRef100_Q6NUG0 MGC79030 protein [Xenopus laevis]                     48  6e-05

>UniRef100_Q96539 10 kDa chaperonin [Brassica napus]
          Length = 98

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP YGG+Q+KL +KE+ LFRDED+LG L
Sbjct: 63 GDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTL 95


>UniRef100_Q8LDC9 Putative 10kd chaperonin (Putative 10kDa chaperonin (CPN10)
          protein) [Arabidopsis thaliana]
          Length = 97

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP +GG+Q+KL +KEFLL+RDEDI+  L
Sbjct: 63 GDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATL 95


>UniRef100_Q42154 Relative to putative 10 kDa chaperonin homologue [Arabidopsis
          thaliana]
          Length = 35

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP +GG+Q+KL +KEFLL+RDEDI+  L
Sbjct: 1  GDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATL 33


>UniRef100_Q9JI95 CPN10-like protein [Mus musculus]
          Length = 102

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 68 GDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 98


>UniRef100_Q64433 10 kDa heat shock protein, mitochondrial [Mus musculus]
          Length = 101

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 97


>UniRef100_P34893 10 kDa chaperonin [Arabidopsis thaliana]
          Length = 98

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 22/33 (66%), Positives = 27/33 (81%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP YGG+Q+KL + E+ LFRDED+LG L
Sbjct: 63 GDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTL 95


>UniRef100_P61604 10 kDa heat shock protein, mitochondrial [Homo sapiens]
          Length = 101

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 97


>UniRef100_Q6B894 Heat shock protein 10 [Ixodes pacificus]
          Length = 101

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 28/31 (90%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++++D+KEF +FRD D+LG
Sbjct: 67 GDKVLLPEYGGTKVEIDNKEFYIFRDSDVLG 97


>UniRef100_P26772 10 kDa heat shock protein, mitochondrial [Rattus norvegicus]
          Length = 101

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 97


>UniRef100_UPI000021F4E3 UPI000021F4E3 UniRef100 entry
          Length = 100

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD D+LG
Sbjct: 66 GDKVLLPEYGGTKVVLDDKDYFLFRDGDVLG 96


>UniRef100_UPI000017F810 UPI000017F810 UniRef100 entry
          Length = 102

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD D+LG
Sbjct: 68 GDKVLLPEYGGTKVVLDDKDYFLFRDGDVLG 98


>UniRef100_Q9DGM3 Chaperonin 10 [Brachydanio rerio]
          Length = 91

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ L+DK++ LFRD DILG
Sbjct: 58 GDKVLLPEYGGTKVMLEDKDYFLFRDADILG 88


>UniRef100_Q6IQI7 Heat shock 10kD protein 1 [Brachydanio rerio]
          Length = 100

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ L+DK++ LFRD DILG
Sbjct: 66 GDKVLLPEYGGTKVMLEDKDYFLFRDADILG 96


>UniRef100_Q6DDD2 Heat shock 10kDa protein 1 [Xenopus tropicalis]
          Length = 102

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          G+++LLP YGG+++ LDDKE+ LFRD DILG
Sbjct: 68 GEKILLPEYGGTKVVLDDKEYFLFRDGDILG 98


>UniRef100_UPI000046CD43 UPI000046CD43 UniRef100 entry
          Length = 91

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD V+LP YGGS +K+D +EF ++RD+DI+GI+
Sbjct: 56 GDVVVLPEYGGSSLKIDGEEFFVYRDDDIIGII 88


>UniRef100_Q8I5Q3 10 kd chaperonin, putative [Plasmodium falciparum]
          Length = 91

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD V+LP YGGS +K+D +EF ++RD+DI+GI+
Sbjct: 56 GDVVVLPEYGGSSLKIDGEEFFVYRDDDIIGII 88


>UniRef100_Q7RKZ8 Chaperonin, 10 kDa [Plasmodium yoelii yoelii]
          Length = 117

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 1   GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
           GD V+LP YGGS +K+D +EF ++RD+DI+GI+
Sbjct: 82  GDVVVLPEYGGSSLKIDGEEFFVYRDDDIIGII 114


>UniRef100_UPI00003661A3 UPI00003661A3 UniRef100 entry
          Length = 99

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          G++VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 65 GEKVLLPEYGGTKVVLDDKDYFLFRDGDILG 95


>UniRef100_UPI000029BF93 UPI000029BF93 UniRef100 entry
          Length = 141

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 20/31 (64%), Positives = 27/31 (86%)

Query: 1   GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
           G++VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 107 GEKVLLPEYGGTKVVLDDKDYFLFRDGDILG 137


>UniRef100_Q6NUG0 MGC79030 protein [Xenopus laevis]
          Length = 102

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 19/31 (61%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD++LLP YGG+++ L+DK++ LFRD DILG
Sbjct: 68 GDKILLPEYGGTKVVLEDKDYFLFRDGDILG 98


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.322    0.154    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,941,866
Number of Sequences: 2790947
Number of extensions: 1276867
Number of successful extensions: 2619
Number of sequences better than 10.0: 545
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2076
Number of HSP's gapped (non-prelim): 546
length of query: 34
length of database: 848,049,833
effective HSP length: 10
effective length of query: 24
effective length of database: 820,140,363
effective search space: 19683368712
effective search space used: 19683368712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)


Lotus: description of TM0162a.12