Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0369a.2
         (1602 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li...    60  4e-08
CAG5_HUMAN (O15320) CTAGE family member 5 (Meningioma-expressed ...    54  3e-06
GAR2_SCHPO (P41891) Protein gar2                                       54  5e-06
USO1_YEAST (P25386) Intracellular protein transport protein USO1       53  6e-06
NUCL_XENLA (P20397) Nucleolin (Protein C23)                            50  5e-05
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor               50  5e-05
ELA1_DROME (Q9VCP0) Probable transcription elongation factor B p...    49  1e-04
ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (X-li...    49  1e-04
GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member...    49  1e-04
GAG_MLVMO (P03332) Gag polyprotein [Contains: Core protein p15; ...    48  2e-04
CYL2_BOVIN (Q28092) Cylicin II (Multiple-band polypeptide II)          48  2e-04
COAT_FMVD (P09519) Probable coat protein                               48  2e-04
GAG_MLVDU (P23090) Gag polyprotein [Contains: Core protein p15; ...    48  2e-04
FUTS_DROME (Q9W596) Microtubule-associated protein futsch              48  2e-04
SPOF_SCHPO (Q10411) Sporulation-specific protein 15                    47  3e-04
RA50_AQUAE (O67124) Probable DNA double-strand break repair rad5...    47  4e-04
EMB5_CAEEL (P34703) Abnormal embryogenesis protein 5                   47  4e-04
MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)               47  6e-04
GAG_MLVRD (P11269) Gag polyprotein [Contains: Core protein p15; ...    47  6e-04
NUF1_YEAST (P32380) NUF1 protein (Spindle poly body spacer prote...    46  7e-04

>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
           (X-linked nuclear protein-1)
          Length = 1359

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 47/286 (16%)

Query: 161 RDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKV-EKSKALQAEEEESEE 219
           +   + S EE     K  + K+++ + +KK++   +   E  K  +KSK    ++ +SE 
Sbjct: 149 KQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSES 208

Query: 220 ASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESG 279
            SE  DE E+    K+  ++ K ++S+ +     K K E   + K+S +E        S 
Sbjct: 209 ESESEDEKEVKKSKKKSKKVVK-KESESEDEAPEKKKTEKRKRSKTSSEE-------SSE 260

Query: 280 HYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEA 339
             KSD  + +K+  PK   K KK L V    S+ E  +SD EV   +   K +GA +   
Sbjct: 261 SEKSDEEEEEKESSPKP--KKKKPLAVKKLSSDEESEESDVEV---LPQKKKRGAVT--- 312

Query: 340 VDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTP 399
           + SDSE E D  S+ E                SD+ +K +      KK KK  S+ S + 
Sbjct: 313 LISDSEDEKDQKSESE---------------ASDVEEKVSK-----KKAKKQESSESGSD 352

Query: 400 SEHEKIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNES 445
           S          +E    VN  S  K +  K ++ +  D+S  + E+
Sbjct: 353 S----------SEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKET 388



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 30/282 (10%)

Query: 157 IELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKS---------EKAKVEKS 207
           +E+ R +EN   E+    LK  E +  E +   KK  A K K+         E+    KS
Sbjct: 21  LEMARQIENERKEKRAQKLK--EKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKS 78

Query: 208 KALQAEEEESEEASEDSDEDE---LTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKK 264
                +  +SE  S++SDE+E    +   K++++  K +  K + +  ++ +     +++
Sbjct: 79  SKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQ 138

Query: 265 SSIKEVTCFECKESGHYKSDCPKLKKDKKPKKH-FKTKKSLMVTFDESESEDVDSDGEVQ 323
            S K+    + + S     +  + +K KK KK+  K+ K    T +ES+ ++  S    +
Sbjct: 139 KSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKK 198

Query: 324 GLM--------------AIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKH 369
           GL                 VK    +SK+ V  +SESE +     + E      TS  + 
Sbjct: 199 GLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEES 258

Query: 370 ALSDIMD-KYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLK 410
           + S+  D +     S+ K  KK   AV K  S+ E   SD++
Sbjct: 259 SESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVE 300



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 26/250 (10%)

Query: 221 SEDSD----EDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQ---KKSSIKEVTCF 273
           SEDSD    EDE   +++++       + K K + + K K E  G+   KK   K+    
Sbjct: 8   SEDSDGHVIEDEDLEMARQIEN-----ERKEKRAQKLKEKREREGKPPPKKRPAKKRKAS 62

Query: 274 ECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKG 333
             +E    + + P+ K  KK +K  K++        ES+  D + D +       V  K 
Sbjct: 63  SSEEDDDDEEESPR-KSSKKSRKRAKSES-------ESDESDEEEDRKKSKSKKKVDQKK 114

Query: 334 AESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNL- 392
            E  +   + S SE D +SD+E E  +   + + K   S    + +      KK KKN  
Sbjct: 115 KEKSKKKRTTSSSE-DEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKE 173

Query: 393 SAVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQ 452
            +V K     E+   D K        S   LK +     E  + D  + +   K  K   
Sbjct: 174 KSVKKRAETSEESDEDEKPSK----KSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVV 229

Query: 453 RFLAKSVDRS 462
           +  ++S D +
Sbjct: 230 KKESESEDEA 239


>CAG5_HUMAN (O15320) CTAGE family member 5 (Meningioma-expressed
           antigen 6/11) (MEA6/MEA11)
          Length = 804

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 27/274 (9%)

Query: 183 SEMQDLKKKSIALKSKSEKAKVEK---------SKALQAEEEESEEASEDSDEDELTL-I 232
           S ++D   +  A +++S +A  EK          + L  E+E  EE S+ S++DEL   I
Sbjct: 110 SSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELMADI 169

Query: 233 SKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDK 292
           SKR+  +    +S       AK  ++     +  +K        E+   +    +L ++ 
Sbjct: 170 SKRIQSLEDESKSLKSQVAEAKMTFQIFPMNEERLKIAIKDALNENSQLQESQKQLLQEA 229

Query: 293 KP-KKHFKTKKSLMVTFDESE--SEDV--DSDGEVQGL---MAIVKDKGAESKEAVDSDS 344
           +  K+         VTF++S+  +E V  D +  ++ L   +  +KD  A   E +  D 
Sbjct: 230 EVWKEQVSELNKQKVTFEDSKVHAEQVLNDKESHIKTLTERLLKMKDWAAMLGEDITDDD 289

Query: 345 ESEGDPNSDDENEVFASFSTSELKHALSDIMD--KYNSLLST----HKKLKKNLSAVSKT 398
             E + NS+ EN    ++  +  K AL  ++   K N+ L T      ++   LS V KT
Sbjct: 290 NLELEMNSESEN---GAYLDNPPKGALKKLIHAAKLNASLKTLEGERNQIYIQLSEVDKT 346

Query: 399 PSEHEKIISDLKNENHALVNSNSVLKNQIAKLEE 432
             E  + I +L+ E  +L + N+  +N+  KL++
Sbjct: 347 KEELTEHIKNLQTEQASLQSENTHFENENQKLQQ 380


>GAR2_SCHPO (P41891) Protein gar2
          Length = 500

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 15/210 (7%)

Query: 158 ELTRDVENMSLEELISILKCH-ELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEE 216
           E  +++   S +  +S  K   E KR+   +  KKS+  + KS+K K E S   ++E   
Sbjct: 35  EAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKK-KEESSSESESESSS 93

Query: 217 SEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECK 276
           SE  S  S+ +  +  S+  +      +S+ +   + + K ESS +  SS          
Sbjct: 94  SESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSS---------S 144

Query: 277 ESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAES 336
           ES   +    K+++ K+      ++ S      ESESE   S+ E +  +    ++  E 
Sbjct: 145 ESEEEEEAVVKIEEKKESSSDSSSESSS----SESESESSSSESEEEEEVVEKTEEKKEG 200

Query: 337 KEAVDSDSESEGDPNSDDENEVFASFSTSE 366
                SDSES  D +S+  +   +S S SE
Sbjct: 201 SSESSSDSESSSDSSSESGDSDSSSDSESE 230



 Score = 40.8 bits (94), Expect = 0.030
 Identities = 40/167 (23%), Positives = 66/167 (38%), Gaps = 2/167 (1%)

Query: 248 KGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKD-KKPKKHFKTKKSLMV 306
           K +   KG  E   + K   KE      K+S        K KK+ K+      +KKS+  
Sbjct: 14  KETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKK 73

Query: 307 TFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSE 366
                + E+  S+ E +   +  +   +ES E+  S+SES    +S  E+E      T E
Sbjct: 74  QKKSKKKEESSSESESESSSSESESSSSES-ESSSSESESSSSESSSSESEEEVIVKTEE 132

Query: 367 LKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNEN 413
            K + S+      S       +K      S + S  E   S+ ++E+
Sbjct: 133 KKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESES 179



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 19/203 (9%)

Query: 173 SILKCHELKRSEMQDLKKKSIALKSKSEKAKVE-KSKALQAEEEESEEASEDSDEDELTL 231
           S+ K  + K+ E    + +S +  S+SE +  E +S + ++E   SE +S +S+E+ +  
Sbjct: 70  SVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVK 129

Query: 232 ISKRLNRIWKHRQSKFKGSGRAKGKYE------------SSGQKKSSIKEVTCFECKESG 279
             ++     K   S+   S  ++ + E            S    +SS  E          
Sbjct: 130 TEEK-----KESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSES 184

Query: 280 HYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEA 339
             + +  +  ++KK      +  S   +   SES D DS  + +   +   +K  +++ A
Sbjct: 185 EEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPA 244

Query: 340 VDSDSESEGDPNSDDENEVFASF 362
            +        P S D NE    F
Sbjct: 245 SEERPAKITKP-SQDSNETCTVF 266


>USO1_YEAST (P25386) Intracellular protein transport protein USO1
          Length = 1790

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 86/432 (19%), Positives = 178/432 (40%), Gaps = 47/432 (10%)

Query: 73   KGIFDSLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPL-NK 131
            K   D+L +  +  KK  E+   SL++  +S   E    I+E+          +  L +K
Sbjct: 1222 KSEIDALNLQIKELKKKNETNEASLLESIKSVESE-TVKIKELQDECNFKEKEVSELEDK 1280

Query: 132  SYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKK 191
               ++D   + +    ES   +   ++       + LE++ ++ K  E   SE+  LKK 
Sbjct: 1281 LKASEDKNSKYLELQKES-EKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKT 1339

Query: 192  SIALKSKS----EKAKVEKSKALQAEEEESEEASEDSD------EDELTLISKRLNRIWK 241
            S   +  +    EK K E     QA E+E +  +E S        +++  +   L R+  
Sbjct: 1340 SSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQN 1399

Query: 242  HRQSKFKGSGRAKGKYESSG--------QKKSSIK----EVTCFECKESGH--------- 280
              + K K     + + E           +K+++IK    E+  ++ K + +         
Sbjct: 1400 ENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIER 1459

Query: 281  -YKSDCPKLKKDKKPKKHFKTK--KSLMVTFDESESEDVD---SDGEVQGLMAIVKDKGA 334
              K D   LK+  +  +  K K  + L    +ES  E  +   S   ++ L + ++    
Sbjct: 1460 DNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNET 1519

Query: 335  ESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSA 394
            E K ++++  +S+      ++++  A      L+H  SD++ + N      ++LK  L  
Sbjct: 1520 ELKSSMETIRKSD---EKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRI 1576

Query: 395  VSKTPSEHEKIISDLKNENHAL---VNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSF 451
             +K+ SE E +  +L N    +      N+VLK+++  +E  +    ++ ++  + EK  
Sbjct: 1577 EAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQE-EKEL 1635

Query: 452  QRFLAKSVDRSL 463
                 K +++ L
Sbjct: 1636 LTSRLKELEQEL 1647



 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 91/400 (22%), Positives = 154/400 (37%), Gaps = 57/400 (14%)

Query: 56   SAISYEEYQKITDREFAKGIFDSLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEEM 115
            S I+ E  +KI   E      + +++ +E   K KE      I    S + + + S +E+
Sbjct: 1377 STITQEYSEKINTLED-----ELIRLQNENELKAKE------IDNTRSELEKVSLSNDEL 1425

Query: 116  FSRFQLLVAGIRPLNKSYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISIL 175
                Q  +  ++    SY  KD + R    L          + + RD     LE L   L
Sbjct: 1426 LEEKQNTIKSLQDEILSY--KDKITRNDEKL----------LSIERD-NKRDLESLKEQL 1472

Query: 176  KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
            +  +  ++++++  KK +  +S  EKA++EKSK +  + E + E++E   +  +  I K 
Sbjct: 1473 RAAQESKAKVEEGLKK-LEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKS 1531

Query: 236  LNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPK 295
              ++    QSK       K          S I E      K+    KS   KL+ + K  
Sbjct: 1532 DEKL---EQSKKSAEEDIKNLQHEKSDLISRINESE----KDIEELKS---KLRIEAKSG 1581

Query: 296  KHFKTKKSLMVTFDE----SESEDVDSDGEVQGLMAIVKDKGA------ESKEAVDS--- 342
               +T K  +    E    +  E+     +++ +   +KDK A      E KE + S   
Sbjct: 1582 SELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLK 1641

Query: 343  ------DSESEGDPNSDDENEVFA---SFSTSELKHALSDIMDKYNSLLSTHKKLKKNLS 393
                  DS  +    S++E            S+L      +  KYN L++  +  K++  
Sbjct: 1642 ELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDED 1701

Query: 394  AVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEI 433
             V KT     + I  L  E   L   NS LK       EI
Sbjct: 1702 TVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEI 1741



 Score = 44.7 bits (104), Expect = 0.002
 Identities = 86/432 (19%), Positives = 180/432 (40%), Gaps = 41/432 (9%)

Query: 65   KITDREFAKGIFDSLKMSHEGNKKVKE--SKAL----SLIQKYESFIMEPNESIEEMFSR 118
            KIT+ +      + +K+      K KE  SK L    S  Q +++ + +  E ++ + + 
Sbjct: 911  KITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANN 970

Query: 119  FQLLVAGIRPLNKSYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISILKCH 178
            ++ + A    L K+     +   I     ++ +  ++  +    +E  S+E+ I  LK  
Sbjct: 971  YKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLK-- 1028

Query: 179  ELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNR 238
                  + DL++    + SKS+ +K E    +   +E+ E A+  +DE+       +++ 
Sbjct: 1029 ----KTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDEN-----VNKISE 1079

Query: 239  IWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHF 298
            + K R+ + +    A    ++  + K    E    E KE+  +  +  K++ +K+  +  
Sbjct: 1080 LTKTRE-ELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKE-EKIQLEKEATETK 1137

Query: 299  KTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAV----------DSDSESEG 348
            +   SL    +  E E  D   +++     + +K  +  E +            ++ES  
Sbjct: 1138 QQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIK 1197

Query: 349  DPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISD 408
              N + E EV A  STSE +  L     + ++L    K+LKK       +  E  K +  
Sbjct: 1198 KKNDELEGEVKAMKSTSEEQSNLK--KSEIDALNLQIKELKKKNETNEASLLESIKSVES 1255

Query: 409  LKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKY-------EKSFQRFLAKSVDR 461
               +   L +  +  + ++++LE+     AS+ +N SKY       EK  +   AK+ + 
Sbjct: 1256 ETVKIKELQDECNFKEKEVSELED--KLKASEDKN-SKYLELQKESEKIKEELDAKTTEL 1312

Query: 462  SLMASMIYGVSR 473
             +    I  +S+
Sbjct: 1313 KIQLEKITNLSK 1324



 Score = 42.0 bits (97), Expect = 0.014
 Identities = 73/390 (18%), Positives = 162/390 (40%), Gaps = 64/390 (16%)

Query: 55   LSAISYEEYQKITDR-EFAKGIFDSLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIE 113
            +S IS+EE +K+  +    KG   SL+   E   +    K ++L  +++           
Sbjct: 724  ISKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHK----------- 772

Query: 114  EMFSRFQLLVAGIRPLNKSYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELIS 173
            E+  ++Q+L +    L ++++  +  ++ +R   +    L   +E T+D EN +   L+ 
Sbjct: 773  ELDEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLE-TKDKENQTA--LLE 829

Query: 174  ILKCHELKRSEMQDLKKKSIALKSKSEKAK--VEK--------SKALQAEEEESEEASED 223
                   +   ++ L+K    + S+ +KA+  + K        S+ +QA EE  +   ++
Sbjct: 830  YKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKE 889

Query: 224  SDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKS 283
             D+  +            H++         K   E    K + IK +     +     K 
Sbjct: 890  KDKSNV-----------NHQK-------ETKSLKEDIAAKITEIKAIN----ENLEEMKI 927

Query: 284  DCPKLKKDKKP-KKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDS 342
             C  L K+K+   K     KS   + D   ++  +   +++ L    KD  AE++  + +
Sbjct: 928  QCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTE---KLKSLANNYKDMQAENESLIKA 984

Query: 343  DSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEH 402
              ES+ +          +S   S L++ +  +  +  +       ++KN+  + KT S+ 
Sbjct: 985  VEESKNE----------SSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDL 1034

Query: 403  EKIISDLKNENHALVNSNSVLKNQIAKLEE 432
            E+   ++ +++    +S    ++QI+ L+E
Sbjct: 1035 EQTKEEIISKSD---SSKDEYESQISLLKE 1061



 Score = 41.6 bits (96), Expect = 0.018
 Identities = 72/306 (23%), Positives = 138/306 (44%), Gaps = 35/306 (11%)

Query: 80   KMSHEGNKKVKE-SKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDH 138
            K+  E +K+  E  K+  +++K ES I E NE+  E+ S  + +      L +S   K  
Sbjct: 1488 KLEEESSKEKAELEKSKEMMKKLESTI-ESNET--ELKSSMETIRKSDEKLEQS---KKS 1541

Query: 139  VIRIIRCLPESWMPLVTSI-ELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKS 197
                I+ L      L++ I E  +D+E +  +  I      EL+  + Q+L      ++ 
Sbjct: 1542 AEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVK-QELNNAQEKIRI 1600

Query: 198  KSEKAKVEKSKALQAEEEESEEASE-DSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGK 256
             +E+  V KSK    E E  ++ +E  S+++E  L++ RL  + +   S  + + +++ +
Sbjct: 1601 NAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEE 1660

Query: 257  YESSGQK----KSSIKE-VTCFECK------ESGHYKSDCPKLKK--DKKPKKHFKTKKS 303
              +  +K    KS + E     E K      +   +K D   +KK  D + ++  K  K 
Sbjct: 1661 RRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKE 1720

Query: 304  L-MVTFDESESEDVDSD-GEVQGLMAIVKD---KGAESKEA-------VDSDSESEGDPN 351
            L  +  + S+ ++ + D  E+  LM +V D   K A+ +         + SD E + + +
Sbjct: 1721 LDNLKAENSKLKEANEDRSEIDDLMLLVTDLDEKNAKYRSKLKDLGVEISSDEEDDEEDD 1780

Query: 352  SDDENE 357
             +DE E
Sbjct: 1781 EEDEEE 1786


>NUCL_XENLA (P20397) Nucleolin (Protein C23)
          Length = 650

 Score = 50.1 bits (118), Expect = 5e-05
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 191 KSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGS 250
           K    ++K +KA     K ++  EEE +   +DS ++E+ +  K+     K   +  K +
Sbjct: 5   KGAKTQAKPKKAAPPPPKDMEDSEEEEDMEEDDSSDEEVEVPVKKTPA--KKTATPAKAT 62

Query: 251 GRAKGKYESSGQKKSS-IKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFD 309
               GK  + G+K ++  K     + +ES   + D  +  +D+KP K+    K  +   +
Sbjct: 63  ---PGKAATPGKKGATPAKNGKQAKKQESEEEEDDSDEEAEDQKPIKNKPVAKKAVAKKE 119

Query: 310 ESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDE 355
           ESE +D D D   +      K   A+       +SE E D  S+DE
Sbjct: 120 ESEEDDDDEDESEEEKAVAKKPTPAKKPAGKKQESEEEDDEESEDE 165


>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
          Length = 678

 Score = 50.1 bits (118), Expect = 5e-05
 Identities = 57/273 (20%), Positives = 110/273 (39%), Gaps = 21/273 (7%)

Query: 179 ELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEES----EEASEDSDEDELTLISK 234
           E K+ E +  K+K I  + K ++ K +K K    E EE+    ++ SE+++ + +  +  
Sbjct: 304 ERKQKEKEMKKQKKIEKERKKKEEKEKKKKKHDKENEETMQQPDQTSEETNNEIMVPLPS 363

Query: 235 RLNRIW---KHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKD 291
            L  +    +H++ + K     +G+++    K+   KE      KE    K    K KKD
Sbjct: 364 PLTDVTTPEEHKEGEHKEEEHKEGEHKEGEHKEEEHKEEE--HKKEEHKSKEHKSKGKKD 421

Query: 292 KKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAI-VKDKGAESKEAVDSDSESEGDP 350
           K  K   K KK+      +   ++V  D +  G+  I ++DK A  ++ +  +S     P
Sbjct: 422 KGKKDKGKHKKAKKEKVKKHVVKNVIEDEDKDGVEIINLEDKEACEEQHITVESRPLSQP 481

Query: 351 NSD--DENEVFASFSTSELKHALSDIMDKYNSLL---------STHKKLKKNLSAVSKTP 399
                DE E       S+++     I ++    +           HKK    +       
Sbjct: 482 QCKLIDEPEQLTLMDKSKVEEKNLSIQEQLIGTIGRVNVVPRRDNHKKKMAKIEEAELQK 541

Query: 400 SEHEKIISDLKNENHALVNSNSVLKNQIAKLEE 432
            +H     D K E+  +   +  ++    ++EE
Sbjct: 542 QKHVDKEEDKKEESKEVQEESKEVQEDEEEVEE 574



 Score = 43.1 bits (100), Expect = 0.006
 Identities = 46/196 (23%), Positives = 73/196 (36%), Gaps = 18/196 (9%)

Query: 213 EEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTC 272
           +E  SE+  ED  ++E+     +  R  K ++ K +     K K +   +KK   KE   
Sbjct: 240 KENISEDKKEDHQQEEMLKTLDKKERKQKEKEMKEQEKIEKKKKKQEEKEKKKQEKERKK 299

Query: 273 FECKESGHYKSDCPKLK-----------KDKKPKKHFKTKKSLMVTFDESESED-----V 316
            E KE    + +  K K           K+KK KKH K  +  M   D++  E      V
Sbjct: 300 QEKKERKQKEKEMKKQKKIEKERKKKEEKEKKKKKHDKENEETMQQPDQTSEETNNEIMV 359

Query: 317 DSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDEN--EVFASFSTSELKHALSDI 374
                +  +    + K  E KE    + E +   + ++E+  E          +H     
Sbjct: 360 PLPSPLTDVTTPEEHKEGEHKEEEHKEGEHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGK 419

Query: 375 MDKYNSLLSTHKKLKK 390
            DK       HKK KK
Sbjct: 420 KDKGKKDKGKHKKAKK 435



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 16/152 (10%)

Query: 77  DSLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTK 136
           +S  +S    K + E + L+L+ K  S + E N SI+E       L+  I  +N      
Sbjct: 474 ESRPLSQPQCKLIDEPEQLTLMDK--SKVEEKNLSIQEQ------LIGTIGRVNVVPRRD 525

Query: 137 DHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALK 196
           +H  ++ + + E+ +     ++   D +  S E         E  +   +D ++     +
Sbjct: 526 NHKKKMAK-IEEAELQKQKHVDKEEDKKEESKE-------VQEESKEVQEDEEEVEEDEE 577

Query: 197 SKSEKAKVEKSKALQAEEEESEEASEDSDEDE 228
            + E+ + E+ +  + EEEE EE  E+ DEDE
Sbjct: 578 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDE 609



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 52/251 (20%), Positives = 101/251 (39%), Gaps = 27/251 (10%)

Query: 161 RDVENMSLEELIS-ILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEE-EESE 218
           +++ N S + +   +L   EL++++  + K +++  + K EK  V  +     +    + 
Sbjct: 35  QNILNKSFDSITGRLLNETELEKNKDDNSKSETLLKEEKDEKDDVPTTSNDNLKNAHNNN 94

Query: 219 EASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKES 278
           E S  +D   +  ++ + N                    E+S  KK   KE    + K+ 
Sbjct: 95  EISSSTDPTNIINVNDKDN--------------------ENSVDKKKDKKEKKHKKDKKE 134

Query: 279 GHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKE 338
              K D  K KKDKK KKH K KK      D+ + E+ +     +      K+     +E
Sbjct: 135 KKEKKD-KKEKKDKKEKKHKKEKKHKK---DKKKKENSEVMSLYKTGQHKPKNATEHGEE 190

Query: 339 AVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKT 398
            +D +  SE + N+     + + +   E +     I   + +   T    K+N+S   K 
Sbjct: 191 NLDEEMVSEINNNAQGGLLLSSPYQYRE-QGGCGIISSVHETSNDTKDNDKENISEDKKE 249

Query: 399 PSEHEKIISDL 409
             + E+++  L
Sbjct: 250 DHQQEEMLKTL 260


>ELA1_DROME (Q9VCP0) Probable transcription elongation factor B
           polypeptide 3 (RNA polymerase II transcription factor
           SIII subunit A) (Elongin A)
          Length = 643

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 55/231 (23%), Positives = 98/231 (41%), Gaps = 20/231 (8%)

Query: 170 ELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDEL 229
           E  S  + H   RS+  D K KS    S+ +K+K ++ K  + ++E  E   + S+ +  
Sbjct: 140 ERSSSSRSHSKSRSD-SDKKHKS----SRHDKSK-DRDKDREGQKEAKEHKEKKSNGEHK 193

Query: 230 TLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLK 289
           +  S + +   K  +S+   S   K K+E      S +KEV   + K S H  S     K
Sbjct: 194 SKDSSKSSSSHKSSKSESHKSEHTKSKHEKDKTSHSELKEV---KDKSSKHKSSSSKSSK 250

Query: 290 KDKKPKKHFKTKKSLMVTFDESESEDVDSDG----------EVQGLMAI-VKDKGAESKE 338
           +   P +H +  +   +   +S+SE+  +DG          +V GL+ I +  K + S  
Sbjct: 251 RSHSPPRHEEESQKAKIPKVKSKSEEDSADGFDSSMGANFDDVLGLLNIPISSKKSSSNS 310

Query: 339 AVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLK 389
                ++    P+S   +    + S+ E     S    K   LL++  KL+
Sbjct: 311 KSKFVAKPTAAPSSSALSAPTTAGSSKEALSTSSRPTSKKPELLASTAKLE 361



 Score = 38.9 bits (89), Expect = 0.11
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 37/216 (17%)

Query: 194 ALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRA 253
           A+ +K + +      A+  EE+  +  S D D D+                 + KG   +
Sbjct: 77  AMVAKEDPSIASTPTAIHNEEDSGKTKSSDEDPDQ-----------------ENKGGNSS 119

Query: 254 KGKYESSGQKKSSIKEVTCFECKES--GHYKSDCPKLKKDKKPKKHFKTK---KSLMVTF 308
            G+  ++ + KS   + T  E   S   H KS     KK K   +H K+K   K      
Sbjct: 120 SGEDLNTSKHKSKHAKSTKHERSSSSRSHSKSRSDSDKKHKS-SRHDKSKDRDKDREGQK 178

Query: 309 DESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELK 368
           +  E ++  S+GE +      KD    S     S SES    ++  ++E   + S SELK
Sbjct: 179 EAKEHKEKKSNGEHKS-----KDSSKSSSSHKSSKSESHKSEHTKSKHEKDKT-SHSELK 232

Query: 369 HALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEK 404
               ++ DK     S HK      S  S +P  HE+
Sbjct: 233 ----EVKDK----SSKHKSSSSKSSKRSHSPPRHEE 260


>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog
           (X-linked nuclear protein) (dXNP) (d-xnp)
          Length = 1311

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 51/171 (29%), Positives = 69/171 (39%), Gaps = 8/171 (4%)

Query: 184 EMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHR 243
           E     KKS   +SKSE       +A  AEEEE EE     DE+E    S       + R
Sbjct: 272 EAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGDEEEAANSSDSEVMPQRKR 331

Query: 244 QSKFKGSGRAKGKYE-SSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKK 302
           + K   S +    +E    QKK   K +      ES     D  +  K K  +K  KT K
Sbjct: 332 RRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDDKQKNKRKHIRKIIKT-K 390

Query: 303 SLMVTFDESESEDVDSDGEVQGLMAI-----VKDKGAESKEAV-DSDSESE 347
            L +T  E+  E+ D    ++    +     VK +  E  E V D D ES+
Sbjct: 391 DLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINELVLDFDEESK 441



 Score = 39.7 bits (91), Expect = 0.067
 Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 24/288 (8%)

Query: 179 ELKRSEMQDLKKKS----IALKSKSEKAKVEK--SKALQAEEEESEEASEDSDEDELTLI 232
           EL  SE  D +++S    I L  ++++ K EK  SKA +   E+ ++A +++       I
Sbjct: 153 ELSDSEEVDEEEESLLVAIPLPKEAQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAI 212

Query: 233 SKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDK 292
            + +N   +   S  + S  +  + ES  + K  +  +           +   PK K  +
Sbjct: 213 -RSVNGTRRGSLSSERSSRASSSRAESPPRPKRCVVRLK----------RVSLPKTKPAQ 261

Query: 293 KPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNS 352
           KPKK     +    T  +S      S+ E          +  E +E   S  E E   +S
Sbjct: 262 KPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGDEEEAANSS 321

Query: 353 DDE--NEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLK 410
           D E   +       SE     SD   +        K++KK  S  S    + +K  +  K
Sbjct: 322 DSEVMPQRKRRRKKSESDKGSSDFEPEEKQKKKGRKRIKKTSSGESDGDGDDDKQKNKRK 381

Query: 411 NENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKS 458
           +    +   +  L  + A  EE    D    R E + +K + R   KS
Sbjct: 382 HIRKIIKTKDLDLTTKEAAKEE----DDRRKRIEDR-QKLYNRIFVKS 424


>GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member 1
            (Giantin) (Macrogolgin) (Golgi complex-associated
            protein, 372-kDa) (GCP372)
          Length = 3259

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 75/373 (20%), Positives = 151/373 (40%), Gaps = 66/373 (17%)

Query: 77   DSLKMSHEG-----NKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNK 131
            +SLK++ EG      K VKE ++L   +  ES   E  E  +E+   +++L+     ++ 
Sbjct: 1570 ESLKLALEGLTEDKEKLVKEIESLKSSKIAES--TEWQEKHKELQKEYEILLQSYENVSN 1627

Query: 132  SYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKK 191
                  HV+  +R   +     + S E  +      L+E             EM+++K+K
Sbjct: 1628 EAERIQHVVEAVRQEKQELYGKLRSTEANKKETEKQLQEA----------EQEMEEMKEK 1677

Query: 192  SIALKSKSEKAKVEKSKALQAEEE------ESEEASEDSDEDELTLISKRLNRIWKHRQS 245
                    + AK ++ K L+ EEE      E   A + + E   TL+S           S
Sbjct: 1678 M------RKFAKSKQQKILELEEENDRLRAEVHPAGDTAKECMETLLSSNA--------S 1723

Query: 246  KFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKH-FKTKKSL 304
              +   R K +YE+  +K  S+               S+   L ++ +  KH  +   S 
Sbjct: 1724 MKEELERVKMEYETLSKKFQSLM--------------SEKDSLSEEVQDLKHQIEDNVSK 1769

Query: 305  MVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSE---SEGDPNSDDENEVFAS 361
                + +E  D  ++   +G  +I  +   E ++++   +    SE  P++   N   + 
Sbjct: 1770 QANLEATEKHDNQTNVTEEGTQSIPGE--TEEQDSLSMSTRPTCSESVPSAKSANPAVSK 1827

Query: 362  FSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNSNS 421
              +S          D+ N+ L    +LK+ ++ + +   ++++    L+NE + L++  S
Sbjct: 1828 DFSSH---------DEINNYLQQIDQLKERIAGLEEEKQKNKEFSQTLENEKNTLLSQIS 1878

Query: 422  VLKNQIAKLEEIV 434
                ++  L+E V
Sbjct: 1879 TKDGELKMLQEEV 1891



 Score = 38.9 bits (89), Expect = 0.11
 Identities = 85/412 (20%), Positives = 167/412 (39%), Gaps = 52/412 (12%)

Query: 35   EMTADQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFDSLKMSHEGNKKVKESKA 94
            E+T +      +H K     L+  S++     T  E A+ + D+LK+  E     KES  
Sbjct: 2057 EITKENLAQAVEHRKKAQAELA--SFKVLLDDTQSEAARVLADNLKLKKELQSN-KESVK 2113

Query: 95   LSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRIIRCLPESWMPLV 154
              + QK E       ++ E+     + +   +  L +     +  I  I+         V
Sbjct: 2114 SQMKQKDEDLERRLEQAEEKHLKEKKNMQEKLDALRREKVHLEETIGEIQ---------V 2164

Query: 155  TSIELTRDVENM--SLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQA 212
            T  +  ++V+ +  +L+  ++ L       S +QD + + I    K E+   + S A+Q+
Sbjct: 2165 TLNKKDKEVQQLQENLDSTVTQLAAFTKSMSSLQDDRDRVIDEAKKWER---KFSDAIQS 2221

Query: 213  EEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRA---KGKYESSGQKKSSIKE 269
            +EEE         ED  +++  +L ++  H +       R    K  +ES  Q +  +++
Sbjct: 2222 KEEEIR-----LKEDNCSVLKDQLRQMSIHMEELKINISRLEHDKQIWESKAQTEVQLQQ 2276

Query: 270  VTC-----------FECKESGH-YKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVD 317
              C            + +E+ H Y S   +L K    +   K+ K  +     S  +  +
Sbjct: 2277 KVCDTLQGENKELLSQLEETRHLYHSSQNELAK---LESELKSLKDQLTDLSNSLEKCKE 2333

Query: 318  SDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDK 377
              G ++G   I++ + A+ + +  S  + E D  +  E        TS L   ++    K
Sbjct: 2334 QKGNLEG---IIRQQEADIQNSKFSYEQLETDLQASRE-------LTSRLHEEINMKEQK 2383

Query: 378  YNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAK 429
              SLLS  ++  +   A+++   +H+K I +L+N        N VL+ +  K
Sbjct: 2384 IISLLSGKEEAIQ--VAIAELRQQHDKEIKELENLLSQEEEENIVLEEENKK 2433



 Score = 37.4 bits (85), Expect = 0.33
 Identities = 61/308 (19%), Positives = 121/308 (38%), Gaps = 50/308 (16%)

Query: 153  LVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKA--- 209
            L++ +E TR + + S  EL  +        SE++ LK +   L +  EK K +K      
Sbjct: 2289 LLSQLEETRHLYHSSQNELAKL-------ESELKSLKDQLTDLSNSLEKCKEQKGNLEGI 2341

Query: 210  LQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKE 269
            ++ +E + + +    ++ E  L + R      H +   K     + K  S    K    +
Sbjct: 2342 IRQQEADIQNSKFSYEQLETDLQASRELTSRLHEEINMK-----EQKIISLLSGKEEAIQ 2396

Query: 270  VTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIV 329
            V   E ++           K+ K+ +     ++   +  +E   + VD   ++   +  +
Sbjct: 2397 VAIAELRQQHD--------KEIKELENLLSQEEEENIVLEEENKKAVDKTNQLMETLKTI 2448

Query: 330  KDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDK---YNSLLSTHK 386
            K +  + K  +DS  +S     +D  + +   +   E +H LS I++K        + + 
Sbjct: 2449 KKENIQQKAQLDSFVKSMSSLQND-RDRIVGDYQQLEERH-LSIILEKDQLIQEAAAENN 2506

Query: 387  KLKKNL----SAVSKTPSEHEKIISDLKNENHAL------------------VNSNSVLK 424
            KLK+ +    S +    SE+ K+ ++L      L                  +  N  L+
Sbjct: 2507 KLKEEIRGLRSHMDDLNSENAKLDAELIQYREDLNQVITIKDSQQKQLLEVQLQQNKELE 2566

Query: 425  NQIAKLEE 432
            N+ AKLEE
Sbjct: 2567 NKYAKLEE 2574



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 84/426 (19%), Positives = 170/426 (39%), Gaps = 68/426 (15%)

Query: 36   MTADQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFDSLKMSHEGNKKVKESKAL 95
            +  + K+L SQ  + R +  S  S  E  K+      K + D L       +K KE K  
Sbjct: 2282 LQGENKELLSQLEETRHLYHS--SQNELAKLESE--LKSLKDQLTDLSNSLEKCKEQKGN 2337

Query: 96   --SLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDH-VIRIIRCLPESWMP 152
               +I++ E+ I     S E++ +  Q        L++    K+  +I ++    E+   
Sbjct: 2338 LEGIIRQQEADIQNSKFSYEQLETDLQASRELTSRLHEEINMKEQKIISLLSGKEEAIQV 2397

Query: 153  LVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQA 212
             +  +    D E   LE L+S               ++++I L+ +++KA V+K+  L  
Sbjct: 2398 AIAELRQQHDKEIKELENLLS-------------QEEEENIVLEEENKKA-VDKTNQLM- 2442

Query: 213  EEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTC 272
            E  ++ +      + +L    K ++ +   R        R  G Y+   ++  SI     
Sbjct: 2443 ETLKTIKKENIQQKAQLDSFVKSMSSLQNDRD-------RIVGDYQQLEERHLSIILEKD 2495

Query: 273  FECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEV----QGLMAI 328
               +E+           ++ K K+  +  +S M   D+  SE+   D E+    + L  +
Sbjct: 2496 QLIQEAA---------AENNKLKEEIRGLRSHM---DDLNSENAKLDAELIQYREDLNQV 2543

Query: 329  VKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTS--ELKHALSDIMDKYNSLLSTHK 386
            +  K ++ K+ ++   +     N + EN+ +A       E + A  D+   +N+L    +
Sbjct: 2544 ITIKDSQQKQLLEVQLQQ----NKELENK-YAKLEEKLKESEEANEDLRRSFNALQEEKQ 2598

Query: 387  KLKKNLSAVSKTPSEHEKIISDLKNEN----------------HALVNSNSVLKNQIAKL 430
             L K + ++  + S+  + ++ L+ E                 H L    S  + +IA+L
Sbjct: 2599 DLSKEIESLKVSISQLTRQVTALQEEGTLGLYHAQLKVKEEEVHRLSALFSSSQKRIAEL 2658

Query: 431  EEIVAC 436
            EE + C
Sbjct: 2659 EEELVC 2664



 Score = 34.7 bits (78), Expect = 2.2
 Identities = 49/275 (17%), Positives = 108/275 (38%), Gaps = 29/275 (10%)

Query: 163  VENMSLE-ELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEAS 221
            ++N  LE E+ ++ KC      E Q L K+   ++S+  K  +EK +  Q E      A 
Sbjct: 1949 IKNELLESEMKNLKKCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKEPGNKSHA- 2007

Query: 222  EDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKY-ESSGQKKSSIKEVTCFECKESGH 280
                        K L  + K +Q + K   +   +Y E     + ++K +   + +    
Sbjct: 2008 ------------KELQELLKEKQQEVKQLQKDCIRYQEKISALERTVKALEFVQTESQKD 2055

Query: 281  YKSDCPKLKKDKKPKKHFKTK-KSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEA 339
             +     L +  + +K  + +  S  V  D+++SE            A V     + K+ 
Sbjct: 2056 LEITKENLAQAVEHRKKAQAELASFKVLLDDTQSE-----------AARVLADNLKLKKE 2104

Query: 340  VDSDSESEGDPNSDDENEVFASFSTSELKH--ALSDIMDKYNSLLSTHKKLKKNLSAVSK 397
            + S+ ES        + ++      +E KH     ++ +K ++L      L++ +  +  
Sbjct: 2105 LQSNKESVKSQMKQKDEDLERRLEQAEEKHLKEKKNMQEKLDALRREKVHLEETIGEIQV 2164

Query: 398  TPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEE 432
            T ++ +K +  L+    + V   +     ++ L++
Sbjct: 2165 TLNKKDKEVQQLQENLDSTVTQLAAFTKSMSSLQD 2199



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 76/389 (19%), Positives = 149/389 (37%), Gaps = 45/389 (11%)

Query: 67   TDREFAKGIFDSLKMSHEGNKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGI 126
            T  E  K   +  ++  + NK+  E ++L  +  +E+ +    ES+++     QL +AG+
Sbjct: 1328 TTSELTKKSEEVFQLQEQINKQGLEIESLKTVS-HEAEVHA--ESLQQKLESSQLQIAGL 1384

Query: 127  RPLNKSYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMS--LEELISILKCHELKRSE 184
              L +     D + ++I    E             DV  +S  L E  + L   + +  E
Sbjct: 1385 EHLRELQPKLDELQKLISKKEE-------------DVSYLSGQLSEKEAALTKIQTEIIE 1431

Query: 185  MQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDED-----------ELTLIS 233
             +DL K          K   E+ K LQ E  E ++  E+  E+           +  LIS
Sbjct: 1432 QEDLIKALHTQLEMQAKEHDERIKQLQVELCEMKQKPEEIGEESRAKQQIQRKLQAALIS 1491

Query: 234  KRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKK 293
            ++     K  +S  +    A+G  E   +  + ++     + KE          L ++++
Sbjct: 1492 RK--EALKENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEKDTVLGRL-ALLQEER 1548

Query: 294  PKKHFKTKKSLMVTFDESES--------EDVDSDGE--VQGLMAIVKDKGAESKEAVDSD 343
             K   +  +SL+     S S        E +  D E  V+ + ++   K AES E  +  
Sbjct: 1549 DKLITEMDRSLLENQSLSSSCESLKLALEGLTEDKEKLVKEIESLKSSKIAESTEWQEKH 1608

Query: 344  SESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHE 403
             E + +     ++    S     ++H +  +  +   L    +  + N     K   E E
Sbjct: 1609 KELQKEYEILLQSYENVSNEAERIQHVVEAVRQEKQELYGKLRSTEANKKETEKQLQEAE 1668

Query: 404  KIISDLKNENHALVNSNSVLKNQIAKLEE 432
            + + ++K +      S    + +I +LEE
Sbjct: 1669 QEMEEMKEKMRKFAKSK---QQKILELEE 1694


>GAG_MLVMO (P03332) Gag polyprotein [Contains: Core protein p15;
           Inner coat protein p12; Core shell protein p30;
           Nucleoprotein p10]
          Length = 538

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           +  +LK   + DL +++  + +K E  + E+ + ++ E EE EE     DE +     K 
Sbjct: 411 RLEDLKNKTLGDLVREAEKIFNKRETPE-EREERIRRETEEKEERRRTEDEQK----EKE 465

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSG--QKKSSIKEVTCFECKESGHYKSDCPK 287
            +R      SK   +  +  K +  G  +++S +    C  CKE GH+  DCPK
Sbjct: 466 RDRRRHREMSKLLATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPK 519


>CYL2_BOVIN (Q28092) Cylicin II (Multiple-band polypeptide II)
          Length = 488

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 40/284 (14%)

Query: 152 PLVTSIELTRDVENMSLEELIS------ILKCHELKRSEMQDLKK--------KSIALKS 197
           P V   +  +D  +   E ++S      + K  E K  E +DLKK        K  A +S
Sbjct: 119 PKVKKSKEDKDKSDSEAESIVSKEKPRKLSKAKEEKPDEKKDLKKERKDSKKGKESATES 178

Query: 198 KSEKAKVEKSK------ALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSG 251
           + EKA  EK        + + +E  S+  SE  D  + +  SK+ ++  K   ++ +G  
Sbjct: 179 EDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKGDAKKDSKKSKKDSK-GKESATESEGEK 237

Query: 252 RAKGKYESSGQKKSSIKEVTCFECK-ESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDE 310
               K +  G+K S   + +  E + E G  K D      DKK KK  K  K    T  E
Sbjct: 238 GDAKKDDKKGKKGSKKGKESATESEGEKGDAKKD------DKKGKKGSKKGKE-SATESE 290

Query: 311 SESEDVDSDGEVQGLMAIVKDKGAE-SKEAVDSDSESEGDPNSDDENEVFASFSTSELKH 369
            E  D   D +          KG + SK+  +S +ESEG+     +++      + + K 
Sbjct: 291 GEKGDAKKDDK----------KGKKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKGKE 340

Query: 370 ALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNEN 413
           + ++   +        KK KK      ++ S+ E    D K ++
Sbjct: 341 SATESEGEKGDAKKDDKKGKKGSKKGKESDSKAEGDKGDAKKDD 384



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 46/189 (24%), Positives = 74/189 (38%), Gaps = 28/189 (14%)

Query: 181 KRSEMQDLKKKSIALKSKSEKAKVEKSK------ALQAEEEESEEASEDSDEDELTLISK 234
           K+ +    K K  A +S+ EK   +K        + + +E  +E   E  D  +     K
Sbjct: 301 KKGKKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDDKKGK 360

Query: 235 RLNRIWKHRQSKFKGS-------------GRAKGKY---ESSGQKKSSIKEVTCFECKES 278
           + ++  K   SK +G              G  KGK    ES G+KK S K+    +    
Sbjct: 361 KGSKKGKESDSKAEGDKGDAKKDDKKDKKGSKKGKESATESEGEKKDSKKDKAGKKDPTK 420

Query: 279 GHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKE 338
              K D  K KKD K K   K KK      DE +  + +S+ +        KD   ++K+
Sbjct: 421 AGEKGDESKDKKDAKKKDSKKEKK------DEKKPGEAESEPKDSAKKDAKKDAKKDAKK 474

Query: 339 AVDSDSESE 347
               D++ +
Sbjct: 475 DAKKDAKKD 483


>COAT_FMVD (P09519) Probable coat protein
          Length = 489

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 60/235 (25%), Positives = 89/235 (37%), Gaps = 51/235 (21%)

Query: 131 KSYTTKDHVIRIIRCLPESWMPLVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKK 190
           KS+TTK  +    R + E           ++ ++N S ++  S      L     +D KK
Sbjct: 300 KSFTTKYSLAFAKRIIQEEIAKYCDFQRTSKKLKNFS-KKCCSKNSLDPLVSFGCRDTKK 358

Query: 191 KSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGS 250
           K      KS K K  K K                         K L ++WK ++ KF   
Sbjct: 359 KDF---KKSSKYKAYKKK-------------------------KTLKKLWKKKKRKF--- 387

Query: 251 GRAKGKYESSGQKKSSI----KEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMV 306
               GKY S  + +       K+  C+ C E GHY ++CP        K H +  K L+ 
Sbjct: 388 --TPGKYFSKKKPEKFCPQGRKKCRCWICTEEGHYANECP------NRKSHQEKVKILIH 439

Query: 307 TFDES--ESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVF 359
             +E     ED  +       M I+++  +E +   DSDS S     SDDE   F
Sbjct: 440 GMNEGYYPLEDAYTGNLEVFSMEIIEETTSEEESTTDSDSSS-----SDDEQLSF 489


>GAG_MLVDU (P23090) Gag polyprotein [Contains: Core protein p15;
           Inner coat protein p12; Core shell protein p30;
           Nucleoprotein p10]
          Length = 529

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           +  +LK   + DL +++  + +K E  + E+ + ++ E EE EE     DE       K 
Sbjct: 402 RLEDLKSKTLGDLVREAEKIFNKRETPE-EREERIRRETEEKEERRRAEDEQR----EKE 456

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSG--QKKSSIKEVTCFECKESGHYKSDCPK 287
            +R      SKF  +     + +  G  +++  + E  C  CKE GH+  DCPK
Sbjct: 457 RDRRRHREMSKFLATVVTGQRQDRQGGERRRPQLDEDQCAYCKEKGHWAKDCPK 510


>FUTS_DROME (Q9W596) Microtubule-associated protein futsch
          Length = 5412

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 78/333 (23%), Positives = 123/333 (36%), Gaps = 42/333 (12%)

Query: 189  KKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNR------IWKH 242
            +K S+A K  S  A V +S   +AE+ + EE+  +S  ++  L SK  +R        K 
Sbjct: 3753 EKSSLASKKASRPASVAESVKDEAEKSK-EESRRESVAEKSPLASKEASRPASVAESVKD 3811

Query: 243  RQSKFKGSGRAKGKYESS------GQKKSSIKEVTCFEC--------KESGHYKSDCPKL 288
               K K   R +   E S        + +S+ E    E         +ESG  KS    +
Sbjct: 3812 EAEKSKEESRRESVAEKSPLPSKEASRPTSVAESVKDEADKSKEESRRESGAEKSPLASM 3871

Query: 289  KKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAI--------VKDKGAESKEAV 340
            +  +        K     + +ES  E V     +    A         VKD+  +SKE  
Sbjct: 3872 EASRPTSVAESVKDETEKSKEESRRESVTEKSPLPSKEASRPTSVAESVKDEAEKSKEES 3931

Query: 341  DSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKK----NLSAVS 396
              +S +E  P +  E+   AS + S    A     +     +    K +       S  S
Sbjct: 3932 RRESVAEKSPLASKESSRPASVAESIKDEAEGTKQESRRESMPESGKAESIKGDQSSLAS 3991

Query: 397  KTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLA 456
            K  S  + ++  +K+E       +++ K+Q+A   E VA  A D   +S      +    
Sbjct: 3992 KETSRPDSVVESVKDETEK-PEGSAIDKSQVASRPESVAVSAKD--EKSPLHSRPESVAD 4048

Query: 457  KSVDRSLMASMIYGVSRNGMHGIGYSKPIRNEP 489
            KS D S  AS    V+         S PI   P
Sbjct: 4049 KSPDASKEASRSLSVAETA------SSPIEEGP 4075



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 110/498 (22%), Positives = 170/498 (34%), Gaps = 44/498 (8%)

Query: 32   PRSEMTADQKKLYSQHHKARAILLSAISYEEYQKITDREF--AKGIFD--SLKMSHEGNK 87
            P S   A       +H +  ++L S    +E  K T R    A  I D  SL +S E ++
Sbjct: 3161 PESSKDATSAPPSKEHSRPESVLGSL--KDEGDKTTSRRVSVADSIKDEKSLLVSQEASR 3218

Query: 88   KVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAG---IRPLNKSYTTKDHVIRIIR 144
               E+++L            P ES+ E     +  VA     RP + +   KD       
Sbjct: 3219 PESEAESLKDAAAPSQETSRP-ESVTESVKDGKSPVASKEASRPASVAENAKDSADESKE 3277

Query: 145  CLPESW------------MPLVTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKKS 192
              PES              PL +  E  +  E    E   S+ +   L   E+      +
Sbjct: 3278 QRPESLPQSKAGSIKDEKSPLASKDEAEKSKEESRRE---SVAEQFPLVSKEVSRPASVA 3334

Query: 193  IALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGR 252
             ++K ++EK+K E     +     +  A    DE E +    R   + +      K + R
Sbjct: 3335 ESVKDEAEKSKEESPLMSKEASRPASVAGSVKDEAEKSKEESRRESVAEKSPLPSKEASR 3394

Query: 253  AKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESE 312
                 ES   +    KE +    +ESG  KS     +  +        K     + +ES 
Sbjct: 3395 PASVAESVKDEADKSKEES---RRESGAEKSPLASKEASRPASVAESIKDEAEKSKEESR 3451

Query: 313  SEDVDSDGEVQGLMA--------IVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFST 364
             E V     +    A         VKD+  +SKE    DS +E  P +  E    AS + 
Sbjct: 3452 RESVAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRDSVAEKSPLASKEASRPASVAE 3511

Query: 365  SELKHALSDIMDKYNSLLS-----THKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNS 419
            S    A     +     ++       K+  +  S       E EK   + + E+   V  
Sbjct: 3512 SVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAESIKDEAEKSKEESRRES---VAE 3568

Query: 420  NSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYGVSRNGMHGI 479
             S L ++ A     VA    D   +SK E S      KS   S  AS    V+ +     
Sbjct: 3569 KSPLASKEASRPTSVAESVKDEAEKSKEESSRDSVAEKSPLASKEASRPASVAESVQDEA 3628

Query: 480  GYSKPIRNEPSVSKAKSL 497
              SK      SV++   L
Sbjct: 3629 EKSKEESRRESVAEKSPL 3646



 Score = 40.4 bits (93), Expect = 0.039
 Identities = 69/322 (21%), Positives = 125/322 (38%), Gaps = 22/322 (6%)

Query: 186  QDLKKKSIA----LKSKSEKAKVEKSKALQAEEEES-EEASEDSDEDELTLISKRLNRIW 240
            ++ +++S+A    L SK        +++++ E E+S EE+  DS  ++  L SK  +R  
Sbjct: 3448 EESRRESVAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRDSVAEKSPLASKEASRPA 3507

Query: 241  KHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKT 300
               +S    + ++K +      ++ S+ E +    KE+    S    +K + +  K    
Sbjct: 3508 SVAESVQDEAEKSKEE-----SRRESVAEKSPLASKEASRPASVAESIKDEAEKSKEESR 3562

Query: 301  KKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFA 360
            ++S+      +  E        +     VKD+  +SKE    DS +E  P +  E    A
Sbjct: 3563 RESVAEKSPLASKEASRPTSVAES----VKDEAEKSKEESSRDSVAEKSPLASKEASRPA 3618

Query: 361  SFSTSELKHALSDIMDKYNSLLS-----THKKLKKNLSAVSKTPSEHEKIISDLKNENHA 415
            S + S    A     +     ++       K+  +  S       + EK   + + E+  
Sbjct: 3619 SVAESVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAESVKDDAEKSKEESRRES-- 3676

Query: 416  LVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYGVSRNG 475
             V   S L ++ A     VA    D   +SK E   +    KS   S  AS    V+ + 
Sbjct: 3677 -VAEKSPLASKEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAESV 3735

Query: 476  MHGIGYSKPIRNEPSVSKAKSL 497
                  SK      SV++  SL
Sbjct: 3736 KDEAEKSKEESRRESVAEKSSL 3757



 Score = 39.3 bits (90), Expect = 0.088
 Identities = 73/350 (20%), Positives = 126/350 (35%), Gaps = 30/350 (8%)

Query: 179  ELKRSEMQDLKKKSIALKS-KSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLN 237
            EL R E     K++ ++K  KS  A  E S+     E   +EA +  +E     ++++  
Sbjct: 1921 ELSRPESTTQSKEAGSIKDEKSPLASEEASRPASVAESVKDEAEKSKEESRRESVAEKSP 1980

Query: 238  RIWKHRQSKFKGSGRAKGKYESSGQ--KKSSIKEVTCFECKESGHYKSDCPKLKKDKKPK 295
               K        +   K + E S +  ++ S+ E +    KE+    S    +K + +  
Sbjct: 1981 LPSKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKS 2040

Query: 296  KHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDE 355
            K    ++S+     E              +   +KD+  +SKE    +S +E  P    E
Sbjct: 2041 KEESRRESVA----EKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKE 2096

Query: 356  NEVFASFSTSELKHALSDIMDKYNSLLS-----THKKLKKNLSAVSKTPSEHEKIISDLK 410
                AS + S    A     +     ++       K+  +  S       E EK   + +
Sbjct: 2097 ASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESR 2156

Query: 411  NENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYG 470
             E+   V   S L ++ A     VA    D   +SK E   +    KS   S  AS    
Sbjct: 2157 RES---VAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVAEKSPLPSKEASRPAS 2213

Query: 471  VSRNGMHGIGYSKPIRNEPSVSKAKSLYECFVPSGTILPDPVPAKIAKNP 520
            V+ +          I++E   SK ++  E           P+P+K A  P
Sbjct: 2214 VAES----------IKDEAEKSKEETRRESVAEK-----SPLPSKEASRP 2248



 Score = 38.1 bits (87), Expect = 0.20
 Identities = 68/326 (20%), Positives = 127/326 (38%), Gaps = 36/326 (11%)

Query: 186  QDLKKKSIALKSK-SEKAKVEKSKALQAEEEESEEASEDSDEDELT----LISKRLNRIW 240
            ++ +++S+A KS  + K     +   ++ ++E+E++ E+S  D +     L SK  +   
Sbjct: 3559 EESRRESVAEKSPLASKEASRPTSVAESVKDEAEKSKEESSRDSVAEKSPLASKEAS--- 3615

Query: 241  KHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKT 300
              R +    S + + +      ++ S+ E +    KE+    S    +K D +  K    
Sbjct: 3616 --RPASVAESVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAESVKDDAEKSKEESR 3673

Query: 301  KKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFA 360
            ++S+      +  E          +   VKD+  +SKE    +S +E  P    E     
Sbjct: 3674 RESVAEKSPLASKE----ASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPT 3729

Query: 361  SFSTS-------ELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNEN 413
            S + S         + +  + + + +SL S  KK  +  S       E EK   + + E+
Sbjct: 3730 SVAESVKDEAEKSKEESRRESVAEKSSLAS--KKASRPASVAESVKDEAEKSKEESRRES 3787

Query: 414  HALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYGVSR 473
               V   S L ++ A     VA    D   +SK E   +    KS   S  AS    V+ 
Sbjct: 3788 ---VAEKSPLASKEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPTSVAE 3844

Query: 474  NGMHGIGYSKPIRNEPSVSKAKSLYE 499
            +          +++E   SK +S  E
Sbjct: 3845 S----------VKDEADKSKEESRRE 3860



 Score = 37.7 bits (86), Expect = 0.26
 Identities = 69/330 (20%), Positives = 130/330 (38%), Gaps = 39/330 (11%)

Query: 196  KSKSEKAKVEKSKALQAEEEES--EEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRA 253
            +SK+   K EKS     +E E   EE+  +S  ++  L+SK ++R     +S        
Sbjct: 3285 QSKAGSIKDEKSPLASKDEAEKSKEESRRESVAEQFPLVSKEVSRPASVAES-------V 3337

Query: 254  KGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESES 313
            K + E S ++   + +        +G  K +  K K++ +  +    +KS + + + S  
Sbjct: 3338 KDEAEKSKEESPLMSKEASRPASVAGSVKDEAEKSKEESR--RESVAEKSPLPSKEASRP 3395

Query: 314  EDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSD 373
              V            VKD+  +SKE    +S +E  P +  E    AS + S     + D
Sbjct: 3396 ASVAES---------VKDEADKSKEESRRESGAEKSPLASKEASRPASVAES-----IKD 3441

Query: 374  IMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEI 433
              +K +   S  + + +     SK  S    +   +K+E  A  +     ++ +A+   +
Sbjct: 3442 EAEK-SKEESRRESVAEKSPLPSKEASRPTSVAESVKDE--AEKSKEESRRDSVAEKSPL 3498

Query: 434  VACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYG---VSRNGMHGIGYSKPIRNEPS 490
             + +AS     +   +S Q    KS + S   S+       S+        ++ I++E  
Sbjct: 3499 ASKEAS---RPASVAESVQDEAEKSKEESRRESVAEKSPLASKEASRPASVAESIKDEAE 3555

Query: 491  VSKAKSLYECFVPSGTILPDPVPAKIAKNP 520
             SK +S  E           P+ +K A  P
Sbjct: 3556 KSKEESRRESVAEK-----SPLASKEASRP 3580



 Score = 35.0 bits (79), Expect = 1.7
 Identities = 57/233 (24%), Positives = 96/233 (40%), Gaps = 30/233 (12%)

Query: 183  SEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDE-LTLISKRLNRIWK 241
            S ++ +K +    +S+ E     +S   +A + +S+ +S+DS +DE  TL SK  +R   
Sbjct: 2893 SVVESVKDEHDKAESRRESIAKVESVIDEAGKSDSKSSSQDSQKDEKSTLASKEASR--- 2949

Query: 242  HRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKD-KKPKKHFKT 300
             R+S  + S            +KS  +  +     E    +S  P   KD  +P    ++
Sbjct: 2950 -RESVVESS--------KDDAEKSESRPESVIASGEPVPRESKSPLDSKDTSRPGSMVES 3000

Query: 301  KKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFA 360
                 VT ++ +SE       V   +     K  +S+EA    S  E   + D++ E   
Sbjct: 3001 -----VTAEDEKSEQQSRRESVAESVKADTKKDGKSQEASRPSSVDELLKDDDEKQESRR 3055

Query: 361  SFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNEN 413
               T   K A+S + D+     S   K  K     SK PS  E +   +K+EN
Sbjct: 3056 QSITGSHK-AMSTMGDE-----SPMDKADK-----SKEPSRPESVAESIKHEN 3097



 Score = 33.9 bits (76), Expect = 3.7
 Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 22/193 (11%)

Query: 329  VKDKGAESKEAVDSDSESE-GDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKK 387
            VKD  A+S+E     S +E     +DD  E+    ST++ K A   I D+ + L S  ++
Sbjct: 1892 VKDGAAQSRETSRPASVAESAKDGADDLKELSRPESTTQSKEA-GSIKDEKSPLAS--EE 1948

Query: 388  LKKNLSAVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKY 447
              +  S       E EK   + + E+   V   S L ++ A     VA    D   +SK 
Sbjct: 1949 ASRPASVAESVKDEAEKSKEESRRES---VAEKSPLPSKEASRPASVAESIKDEAEKSKE 2005

Query: 448  EKSFQRFLAKSVDRSLMASMIYGVSRNGMHGIGYSKPIRNEPSVSKAKSLYECFVPSGTI 507
            E   +    KS   S  AS    V+ +          I++E   SK +S  E        
Sbjct: 2006 ESRRESVAEKSPLPSKEASRPASVAES----------IKDEAEKSKEESRRESVAEK--- 2052

Query: 508  LPDPVPAKIAKNP 520
               P+P+K A  P
Sbjct: 2053 --SPLPSKEASRP 2063



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 84/389 (21%), Positives = 148/389 (37%), Gaps = 54/389 (13%)

Query: 189  KKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFK 248
            +K  +  K  S  A V +S   +AE+ + EE+  +S  ++  L SK  +R     +S  K
Sbjct: 2125 EKSPLPSKEASRPASVAESIKDEAEKSK-EESRRESVAEKSPLPSKEASRPASVAES-IK 2182

Query: 249  GSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTF 308
                 K K ES   ++ S+ E +    KE+    S    +K D+  K   +T++  +   
Sbjct: 2183 DEAE-KSKEES---RRESVAEKSPLPSKEASRPASVAESIK-DEAEKSKEETRRESVAEK 2237

Query: 309  DESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTS--- 365
                S++      V      +KD+  +SKE    +S +E  P    E    AS + S   
Sbjct: 2238 SPLPSKEASRPASVA---ESIKDEAEKSKEESRRESAAEKSPLPSKEASRPASVAESVKD 2294

Query: 366  -------ELKHALSDIMDKYNSLLSTHKKLK------------KNLSAVSKTPSEHEKII 406
                   E +        K  S+      LK            K+    SK PS  E + 
Sbjct: 2295 EADKSKEESRRESMAESGKAQSIKGDQSPLKEVSRPESVAESVKDDPVKSKEPSRRESVA 2354

Query: 407  SDLKNENHALVNSNSVLKNQIAKLEEIVA------CDASDCRNESKYEKSFQRFLAKSVD 460
              +  ++    +  S L+++ A   E V        +  + R ESK E        K+ D
Sbjct: 2355 GSVTADSAR--DDQSPLESKGASRPESVVDSVKDEAEKQESRRESKTESVIP---PKAKD 2409

Query: 461  RSLMASMIYGVSRNGMHGIGYSKPIRNEPSVSKAKSLYECF-VPSGTILPDPVPAKIAKN 519
                  ++  VS          +P++   + S+ +S+ E     S      P+ +K A  
Sbjct: 2410 DKSPKEVLQPVSMTETIREDADQPMKPSQAESRRESIAESIKASSPRDEKSPLASKEASR 2469

Query: 520  PLKKGSFSMTKYHANIPLKYYVETPKVIR 548
            P   GS + +       +KY ++ P++I+
Sbjct: 2470 P---GSVAES-------IKYDLDKPQIIK 2488



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 78/395 (19%), Positives = 146/395 (36%), Gaps = 71/395 (17%)

Query: 169  EELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEA-------- 220
            E ++  +K   +K +E    +++S+A   K++  K EKS     +    E A        
Sbjct: 1660 ESVLESVKDEPIKSTEKS--RRESVAESFKADSTKDEKSPLTSKDISRPESAVENVMDAV 1717

Query: 221  -SEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYES--------SGQKKSSIKEVT 271
             S +  + E    S+ ++R     +S+   + + +   ES          +K ++ KE  
Sbjct: 1718 GSAERSQPESVTASRDVSRPESVAESEKDDTDKPESVVESVIPASDVVEIEKGAADKEKG 1777

Query: 272  CFECKESGHYKSDCPK--------LKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQ 323
             F   E G  K D P         + +  KP+   ++   +++      +ED       +
Sbjct: 1778 VFVSLEIG--KPDSPSEVISRPGPVVESVKPESRRESSTEIVL---PCHAEDSKEPSRPE 1832

Query: 324  GLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLS 383
              +  +KD+    K +   +S +E D +S    E      TS  + A+  + D+  S   
Sbjct: 1833 SKVECLKDESEVLKGSTRRESVAESDKSSQPFKE------TSRPESAVGSMKDESMSKEP 1886

Query: 384  THKKLKKNLSAVSKTPSEHEKIISDLKN------------------ENHALVNSNSVLKN 425
            + ++  K+ +A S+  S    +    K+                  E  ++ +  S L +
Sbjct: 1887 SRRESVKDGAAQSRETSRPASVAESAKDGADDLKELSRPESTTQSKEAGSIKDEKSPLAS 1946

Query: 426  QIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDRSLMASMIYGVSRNGMHGIGYSKPI 485
            + A     VA    D   +SK E   +    KS   S  AS    V+ +          I
Sbjct: 1947 EEASRPASVAESVKDEAEKSKEESRRESVAEKSPLPSKEASRPASVAES----------I 1996

Query: 486  RNEPSVSKAKSLYECFVPSGTILPDPVPAKIAKNP 520
            ++E   SK +S  E           P+P+K A  P
Sbjct: 1997 KDEAEKSKEESRRESVAEK-----SPLPSKEASRP 2026


>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
          Length = 1957

 Score = 47.4 bits (111), Expect = 3e-04
 Identities = 77/390 (19%), Positives = 160/390 (40%), Gaps = 44/390 (11%)

Query: 85   GNKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRIIR 144
            G  K++ESK+  L +K  +   E +   EE  S+ Q + +    L+++ +    +   I 
Sbjct: 934  GKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIE 993

Query: 145  CLPESWMPLVTSIELTRDVENMSLEELISILKCH-----------ELKRSEMQDLKKKSI 193
             L       V+ +E+ R+    S E L+  LK +           E KR+E  DL+ K  
Sbjct: 994  HLKNK----VSEVEVERNALLASNERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLS 1049

Query: 194  ALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRA 253
             + S+ E   +  S+  ++ E+++         ++L  I K + ++   +  +       
Sbjct: 1050 VVSSEYENLLLISSQTNKSLEDKT---------NQLKYIEKNVQKLLDEKDQRNVELEEL 1100

Query: 254  KGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKH-----FKTKKSLMVTF 308
              KY   G++ + IK+      K+S      C     D K K          K  L+V+ 
Sbjct: 1101 TSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQLTNEKNELIVSL 1160

Query: 309  DESESED---VDSDGEVQGLMAIVKDKGAESKEAVD---SD---SESEGDPNSDDENEVF 359
            ++S S +   V+   ++   ++ +K   ++S   +    SD      E D    D++ + 
Sbjct: 1161 EQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLS 1220

Query: 360  ASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNS 419
              +  SE+     D++D       +  K   +L  +  T SE +  +S++ ++N      
Sbjct: 1221 TQY--SEVCQDRDDLLDSLKGCEESFNKYAVSLRELC-TKSEIDVPVSEILDDNFVFNAG 1277

Query: 420  NSVLKNQIAKLEEIVACDASDCRNESKYEK 449
            N    +++++L  +   +  D  N+  ++K
Sbjct: 1278 NF---SELSRLTVLSLENYLDAFNQVNFKK 1304



 Score = 40.4 bits (93), Expect = 0.039
 Identities = 59/344 (17%), Positives = 130/344 (37%), Gaps = 11/344 (3%)

Query: 86   NKKVKESKALSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRIIRC 145
            N++ KES  L    + E  + + +     +  + + + + +   +    +    +  ++ 
Sbjct: 1429 NQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESINSSLDDKSFELASAVEKLGALQK 1488

Query: 146  LPESWMPLVTSI--ELTRDVENMSLEELISILKCHELKRSEMQ---DLKKKSIALKSKSE 200
            L    + L+ +I  +L    E + ++E       HE+  S+      L  K   ++  SE
Sbjct: 1489 LHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSE 1548

Query: 201  KAKVEKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESS 260
               +E+   L AEE+ + +      E E+   + RL  +  H+       GR+K K  S+
Sbjct: 1549 N--IEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEYHKSQVESELGRSKLKLAST 1606

Query: 261  GQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKP-KKHFKTKKSLMVTFDESESEDVDSD 319
             ++    +             ++    L   K    +  +T +SL  +    + E     
Sbjct: 1607 TEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSVASLQKECKIKS 1666

Query: 320  GEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYN 379
              V+ L  ++    A + E  D  S S       D+        + +LK   S + +++ 
Sbjct: 1667 NTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDR---CEHLSGKLKKLHSQLEEQHE 1723

Query: 380  SLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNSNSVL 423
            +     ++    L  + +T  + EK++  L      L+  +S+L
Sbjct: 1724 TFFRAEQQRMTQLGFLKETVKKQEKLLKKLNLRQEQLIPRSSIL 1767



 Score = 38.5 bits (88), Expect = 0.15
 Identities = 70/325 (21%), Positives = 130/325 (39%), Gaps = 20/325 (6%)

Query: 154 VTSIELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAK---------V 204
           VT++    DV     ++L ++      K+SE  DL ++ + +  K +K +         V
Sbjct: 173 VTTLTSEEDVSYFQ-KKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDV 231

Query: 205 EKSKALQAEEEESEEASEDSDEDELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKK 264
              KA  AEE+ S ++     E    L+      +   RQ++   S RA+ K      +K
Sbjct: 232 SSIKASLAEEQASNKSLRGEQERLEKLLVSSNKTVSTLRQTE--NSLRAECKTLQEKLEK 289

Query: 265 SSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQG 324
            +I E      +E  H  ++       K   K  +   + +  FD  +SE      + + 
Sbjct: 290 CAINEEDSKLLEELKHNVANYSDAIVHKD--KLIEDLSTRISEFDNLKSERDTLSIKNEK 347

Query: 325 LMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLST 384
           L  ++++     K++  S+S+ E +     E+        ++ +  LS    +  SL  +
Sbjct: 348 LEKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGS 407

Query: 385 HKKLKKNLSA----VSKTPSEHEKIISDLKNENHAL--VNSNSVLKNQIAKLEEIVACDA 438
             + + NLS+    V +  S+ E+  S L +    L  +NS    +N+  K  E +  D 
Sbjct: 408 IDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDL 467

Query: 439 SDCRNESKYEKSFQRFLAKSVDRSL 463
             C N S  E   +  L    D+ L
Sbjct: 468 RACLNSSSNELKEKSALIDKKDQEL 492


>RA50_AQUAE (O67124) Probable DNA double-strand break repair rad50
           ATPase
          Length = 978

 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 93/419 (22%), Positives = 166/419 (39%), Gaps = 63/419 (15%)

Query: 55  LSAISYEEYQKITDREFAKGIFDSLKMSH----EGNKKVKESKAL-----SLIQKYESFI 105
           L A + E+ +KI +  F++  + SLKM      E  +K+KE K       +L QKY+   
Sbjct: 389 LVAETEEKLEKIKEL-FSEEEYTSLKMKERLLVELQRKLKELKEKEGQLENLTQKYK--- 444

Query: 106 MEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRIIRCL-PESWMPLVTSIELTRDVE 164
            E  +  E++ +  + L   ++     Y    H   +   L P    P+   I   + +E
Sbjct: 445 -EKKKVHEKVLNELKELERELKERELHY----HAHMVASYLSPGDTCPVCGGIYRGKALE 499

Query: 165 NMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDS 224
           N+  E +  +    ELK  E +++         K    K E  K     EE  +E  E+ 
Sbjct: 500 NVDAEGISELKHAKELKEKEEREIDTTLKLYAQKINSLKEEMEKLRNEVEELRKEIPENL 559

Query: 225 DE-----DELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESG 279
            E     +EL +  ++L    +H+ +K++ +   + K +   Q K    +      KE  
Sbjct: 560 KERIKKLEELRIEKEKL----EHKLNKYRKALEDRQKQKEEAQAKLHKAQTELELLKEKI 615

Query: 280 HYKSDCPKLKKD----------------------KKPKKHFKTKKSLMVTFDESESEDVD 317
             KS   K  K+                       K ++  + +K L   F+E  S    
Sbjct: 616 REKSRLVKEFKELYRVERLEDYEESLKEEINYINSKLQEIEEKEKKLRKHFEELSSRKSK 675

Query: 318 SDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDE-NEVFASFSTSELKHALSDIMD 376
            +GE+  L   +     E KE +   +       S  E  E++     +EL+  + +  +
Sbjct: 676 LEGELSALNESINSLEEERKEKLKELANIYEVAKSPREVVELYLGDKEAELERKIKEFEE 735

Query: 377 KYNSLLSTHKKLKKNLSAVSKTPSEHEKI--ISDLKNENHALVNSNSVLKNQIAKLEEI 433
            + SL     KLKK  S + +   E+E I  +SD+K E  ++    + L+ +  KL E+
Sbjct: 736 SFQSL-----KLKK--SEIEEKLKEYEGIRELSDIKGEYESV---KTQLEEKHKKLGEV 784


>EMB5_CAEEL (P34703) Abnormal embryogenesis protein 5
          Length = 1521

 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 27/82 (32%), Positives = 42/82 (50%), Gaps = 3/82 (3%)

Query: 278 SGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSD---GEVQGLMAIVKDKGA 334
           SGH   + P+ KK K  K+  K KK ++ + DE E +D D +    E+QG +A   D+  
Sbjct: 15  SGHSDDEEPQSKKMKMAKEKSKRKKKMVASSDEDEDDDDDEEENRKEMQGFIADDDDEEE 74

Query: 335 ESKEAVDSDSESEGDPNSDDEN 356
           ++K      S   G+   DDE+
Sbjct: 75  DAKSEKSEKSRHSGEDELDDED 96


>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)
          Length = 1391

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 55/282 (19%), Positives = 109/282 (38%), Gaps = 10/282 (3%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           KC +  +   +  +KK  A  +K EK   EK K  +A ++E E A     E+    I K 
Sbjct: 670 KCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKA 729

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKE-VTCFE-CKESGHYKSDCPK-LKKDK 292
             +    + +K K +G      + + + K ++KE   C E  K+    K  C +  KK+K
Sbjct: 730 AEKKKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEK 789

Query: 293 KPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNS 352
           +  +  K +K+     +E+E +  +   + +   A  K     +K+  +   + + +  +
Sbjct: 790 EAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKKKCEKTA 849

Query: 353 DDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNE 412
               E        +         +K     +  K+ +          ++ EK +++ K  
Sbjct: 850 KKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKC 909

Query: 413 NHALVNSNSVLKNQIAKLEEIV-----ACDASDCRNESKYEK 449
             A      V + +  K EE+      A +   C+  +K EK
Sbjct: 910 EEAAKKEKEVAERK--KCEELAKKIKKAAEKKKCKKLAKKEK 949



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 64/308 (20%), Positives = 119/308 (37%), Gaps = 31/308 (10%)

Query: 158 ELTRDVENMSLEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEES 217
           EL + ++   +++    L   E + +E +  +K +   K  +EK K EK+   + E  E 
Sbjct: 497 ELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEK 556

Query: 218 EEASEDSDEDELTLISKRLNRIWKHRQ---SKFKGSGRAKGKYESSGQKKSS------IK 268
           ++  + + + +     K+  +  K R+    K K    AK + E + +KK         K
Sbjct: 557 KKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELAKKIKK 616

Query: 269 EVTCFECKESGHYKSD------CPKL-KKDKKPKKHFKTKKSLMVTFDESESEDVDSDGE 321
                +CKE+   + +      C +L KK KK  +  K KK      + +E +  +   +
Sbjct: 617 AAEKKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAK 676

Query: 322 VQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSL 381
            +   A  K     +K+  ++  + + +  +  E E        EL   +    +K    
Sbjct: 677 KRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKAAEK---- 732

Query: 382 LSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDC 441
               KK KK   A  K   E  K+    K    AL       K +  +L +  A +   C
Sbjct: 733 ----KKCKK--LAKKKKAGEKNKLKKGNKKGKKALKE-----KKKCRELAKKKAAEKKKC 781

Query: 442 RNESKYEK 449
           +  +K EK
Sbjct: 782 KEAAKKEK 789



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 27/286 (9%)

Query: 176  KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
            +C E  + E +  +KK  A  +K EK   EK K  +A ++E E A    ++ +    +KR
Sbjct: 1127 RCEEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAA----EKKKCAEAAKR 1182

Query: 236  LNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPK 295
                 K    K K +  AK + E +  KK    E    + KE+   K  C K    KK K
Sbjct: 1183 ----EKEAAQKKKCADLAKKEQEPAEMKKC---EEAAKKEKEAAE-KQKCAKAA--KKEK 1232

Query: 296  KHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDE 355
            +  + KK       E E+ +     E     A  K+K AE K   +   ++        +
Sbjct: 1233 EAAEKKKCAEAAKKEQEAAEKKKCAE-----AAKKEKEAEKKRKCEKAEKAAALKRQCAK 1287

Query: 356  NEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHEKIISDLKNENHA 415
              + A  +    K A+  I  K  + ++  KK  + L+  +K   E +K     K +  A
Sbjct: 1288 LVIRAKEAALRKKCAI--IAKK--AKMAAEKKECEKLAKKAKEAIEWKKCAKLAKKKREA 1343

Query: 416  LVNSNSVLKNQIAKLEEIVACDASDCRNESKYEKSFQRFLAKSVDR 461
                 +    ++AK E+  A     C++ +K +K   +   ++ +R
Sbjct: 1344 EKKKCA----KLAKKEKEAAEKKKRCKDLAKNKKKGHKKKGRNENR 1385



 Score = 41.2 bits (95), Expect = 0.023
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 19/138 (13%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           KC +  +   +  +KK  A  +K EK   EK K  +A ++E E A     E+    ++K+
Sbjct: 876 KCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEE----LAKK 931

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPK 295
           + +  + ++ K         K E    +K+ +K       K++G  K  C KL   KK K
Sbjct: 932 IKKAAEKKKCK------KLAKKEKKAGEKNKLK-------KKAGKGKKKCKKL--GKKSK 976

Query: 296 KHFKTKKSLMVTFDESES 313
           +  + KK       E E+
Sbjct: 977 RAAEKKKCAEAAKKEKEA 994



 Score = 38.9 bits (89), Expect = 0.11
 Identities = 58/284 (20%), Positives = 105/284 (36%), Gaps = 28/284 (9%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           KC +L R   ++ +KK  A  +K +K + EK KA +   ++ +EA E    +E     K+
Sbjct: 334 KCKDLGRKMKEEAEKKKCAALAKKQKEEDEK-KACKELAKKKKEADEKKKCEEAANKEKK 392

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPK 295
                     K K    AK + E++ +KK          C+E+   + +  + KK ++  
Sbjct: 393 -------AAEKKKCEKAAKERKEAAEKKK----------CEEAAKKEKEAAERKKCEELA 435

Query: 296 KHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDE 355
           K+ K         + ++ E   ++ +    +A    K AE K+  ++  + +        
Sbjct: 436 KNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKCEETAKKGKEVAERKKC 495

Query: 356 NEVFASFSTSELKHALSDIMDKYNSLL---STHKKLKKNLSAVSKTPSE-----HEKIIS 407
            E+      +E+K     +  K           K  KK   A  K   E      ++   
Sbjct: 496 EELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAE 555

Query: 408 DLKNENHALVNSNSVLKNQIAKL--EEIVACDASDCRNESKYEK 449
             K E  A     +  K +  K   E   A +   C   +K EK
Sbjct: 556 KKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEK 599



 Score = 36.6 bits (83), Expect = 0.57
 Identities = 55/286 (19%), Positives = 103/286 (35%), Gaps = 16/286 (5%)

Query: 176  KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
            KC +L +   +  +KK  A  +K EK    K K  +  +++ E A +   E+    + + 
Sbjct: 967  KCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAKKLKEA 1026

Query: 236  L-NRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFE----CKESGHYKSDCPKLKK 290
               +  + R  K K +   K   E + + K + ++  C E     KE+   K    + KK
Sbjct: 1027 AEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKK 1086

Query: 291  DK---KPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESE 347
            +K   + K+  +  K L    ++ + E+     +        ++     KEA +    +E
Sbjct: 1087 EKEAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAE 1146

Query: 348  GDPNSDDENE----VFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHE 403
                  +  E      A+    E                +  KK   +L+   + P+E +
Sbjct: 1147 AAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKCADLAKKEQEPAEMK 1206

Query: 404  KIISDLKNENHALVNSNSVLKNQIAKLEEIVACDASDCRNESKYEK 449
            K     K E  A        K   A  +E  A +   C   +K E+
Sbjct: 1207 KCEEAAKKEKEAAEKQ----KCAKAAKKEKEAAEKKKCAEAAKKEQ 1248



 Score = 35.8 bits (81), Expect = 0.97
 Identities = 58/290 (20%), Positives = 106/290 (36%), Gaps = 31/290 (10%)

Query: 169  EELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDE 228
            +E+    KC EL +   +  +KK     +K EK   EK+K  +   +  ++         
Sbjct: 917  KEVAERKKCEELAKKIKKAAEKKKCKKLAKKEKKAGEKNKLKKKAGKGKKKC-------- 968

Query: 229  LTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKL 288
                 K+L +  K    K K +  AK + E++ +KK   +     E  E    +    KL
Sbjct: 969  -----KKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAKKL 1023

Query: 289  KKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAE--SKEAVDSDSES 346
            K+  + K+  +  K L    ++ + E+       + L    + K  E  +K+  ++  + 
Sbjct: 1024 KEAAEQKQCEERAKKLKEAAEKKQCEE-----RAKKLKEAAEQKQCEERAKKLKEAAEKK 1078

Query: 347  EGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSE----H 402
            + +  +  E E        E    L +  +K        ++ KK   A  K   E     
Sbjct: 1079 QCEERAKKEKEAAEKKQCEERAKKLKEAAEK----KQCEERAKKEKEAAEKKRCEEAAKR 1134

Query: 403  EKIISDLKNENHALVNSNSVLKNQ---IAKLEEIVACDASDCRNESKYEK 449
            EK  ++ K    A        + Q    A  +E  A +   C   +K EK
Sbjct: 1135 EKEAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREK 1184



 Score = 33.5 bits (75), Expect = 4.8
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 15/186 (8%)

Query: 168  LEELISILKCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDED 227
            L+E     +C E  + E +  +KK    ++K  K   EK +  +  ++E E A +   E+
Sbjct: 1071 LKEAAEKKQCEERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEE 1130

Query: 228  ------ELTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHY 281
                  E     K      K +++  K       K E    +K    E    E KE+   
Sbjct: 1131 AAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKRE-KEAAQK 1189

Query: 282  KSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVD 341
            K      KK+++P +        M   +E+  ++ ++  + +   A  K+K A  K+   
Sbjct: 1190 KKCADLAKKEQEPAE--------MKKCEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKCA 1241

Query: 342  SDSESE 347
              ++ E
Sbjct: 1242 EAAKKE 1247


>GAG_MLVRD (P11269) Gag polyprotein [Contains: Core protein p15;
           Inner coat protein p12; Core shell protein p30;
           Nucleoprotein p10]
          Length = 537

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 176 KCHELKRSEMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASEDSDEDELTLISKR 235
           +  +LK   ++DL +++  + +K E  + E+ +  + E EE+EE     DE       K 
Sbjct: 410 RLEDLKSKTLRDLVREAEKIFNKRETPE-EREERFRRETEENEERRRAEDEQR----EKE 464

Query: 236 LNRIWKHRQSKFKGSGRAKGKYESSG--QKKSSIKEVTCFECKESGHYKSDCPK 287
            +R  +   SK   +     + +  G  +K+  + +  C  CKE GH+  DCPK
Sbjct: 465 RDRRRQREMSKLLATVVTGQRQDRQGGERKRPQLDKDQCAYCKEKGHWAKDCPK 518


>NUF1_YEAST (P32380) NUF1 protein (Spindle poly body spacer protein
           SPC110)
          Length = 944

 Score = 46.2 bits (108), Expect = 7e-04
 Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 37/265 (13%)

Query: 176 KCHELKR--SEMQDLKKKS----IALKSKSEKAKVEKSKALQAEEEESEEASEDS-DEDE 228
           K +EL++  +E+ +LK KS    + LK K  ++K  K +  + E + SE  S+ S  E+E
Sbjct: 295 KKNELRKRTNELNELKIKSDEMDLQLKQKQNESKRLKDELNELETKFSENGSQSSAKENE 354

Query: 229 LTLISKRLNRIWKHRQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKL 288
           L ++  ++  + +   +K       +GK  S   + + ++        + G         
Sbjct: 355 LKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLNQRDSQLGS-------- 406

Query: 289 KKDKKPKKHFKTKKSLMVTFDESESED---VDSDGEVQGL---MAIVKDKGAESKEAVDS 342
           ++++  K + K +K + +  +E+ S+D   +D   +V+ L   + ++K   +ESK   D+
Sbjct: 407 REEELKKTNDKLQKDIRIAREETVSKDERIIDLQKKVKQLENDLFVIKKTHSESKTITDN 466

Query: 343 DSESEGDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLSTHKKLKKNLSAVSKTPSEH 402
           + ES+       EN+             L    +KY+ +    K+ + N   +S++  E 
Sbjct: 467 ELESKDKLIKILEND-------------LKVAQEKYSKMEKELKEREFNYK-ISESKLED 512

Query: 403 EKIISDLKNENHALVNSNSVLKNQI 427
           EK   + K  N  L   NS LKN+I
Sbjct: 513 EKTTLNEKISN--LAAENSQLKNKI 535



 Score = 35.4 bits (80), Expect = 1.3
 Identities = 57/248 (22%), Positives = 105/248 (41%), Gaps = 28/248 (11%)

Query: 184 EMQDLKKKSIALKSKSEKAKVEKSKALQAEEEESEEASE-DSDEDELTLISKRLNRIWKH 242
           E + +++K   L+    K K  K + L+ E     ++ +  S EDEL  +   LN +  +
Sbjct: 228 EREQMERKLAELE---RKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSN 284

Query: 243 RQSKFKGSGRAKGKYESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKKPKKHFKTK- 301
            + K       K +      + + +K             KSD   L+  +K  +  + K 
Sbjct: 285 AEEKDTQLEFKKNELRKRTNELNELK------------IKSDEMDLQLKQKQNESKRLKD 332

Query: 302 --KSLMVTFDESESEDVDSDGEVQGLMAIVKDKGAESKEAVDSDSESEGDPNSDDENEVF 359
               L   F E+ S+    + E++    ++K+K AE +E + S   S+          + 
Sbjct: 333 ELNELETKFSENGSQSSAKENELK----MLKNKIAELEEEI-STKNSQLIAKEGKLASLM 387

Query: 360 ASFST--SELKHALSDIMDKYNSLLSTHKKLKKNLS-AVSKTPSEHEKIISDLKNENHAL 416
           A  +   S+L    S +  +   L  T+ KL+K++  A  +T S+ E+II DL+ +   L
Sbjct: 388 AQLTQLESKLNQRDSQLGSREEELKKTNDKLQKDIRIAREETVSKDERII-DLQKKVKQL 446

Query: 417 VNSNSVLK 424
            N   V+K
Sbjct: 447 ENDLFVIK 454



 Score = 33.1 bits (74), Expect = 6.3
 Identities = 22/89 (24%), Positives = 41/89 (45%), Gaps = 8/89 (8%)

Query: 351 NSDDENEVFASFSTSELKHAL-------SDIMDKYNSLLSTHKKLKKNLSAVSKTPSEHE 403
           NSD  N+         LKH +       +D ++ Y++L      LK  L A+ K      
Sbjct: 152 NSDISNKELYINEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKN 211

Query: 404 KIISDLKNENHA-LVNSNSVLKNQIAKLE 431
           KI++  K ++H+  +     ++ ++A+LE
Sbjct: 212 KIVNSRKVDDHSGCIEEREQMERKLAELE 240


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.355    0.156    0.545 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,373,547
Number of Sequences: 164201
Number of extensions: 5520889
Number of successful extensions: 55011
Number of sequences better than 10.0: 619
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 50205
Number of HSP's gapped (non-prelim): 3055
length of query: 1602
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1478
effective length of database: 39,613,130
effective search space: 58548206140
effective search space used: 58548206140
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 73 (32.7 bits)


Lotus: description of TM0369a.2