BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0192.14
(75 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha) 134 4e-32
EF1A_MANES (O49169) Elongation factor 1-alpha (EF-1-alpha) 133 7e-32
EF1A_VICFA (O24534) Elongation factor 1-alpha (EF-1-alpha) 133 9e-32
EF1A_PEA (Q41011) Elongation factor 1-alpha (EF-1-alpha) 133 9e-32
EF12_DAUCA (P34823) Elongation factor 1-alpha (EF-1-alpha) 133 9e-32
EF1A_ORYSA (O64937) Elongation factor 1-alpha (EF-1-alpha) 132 2e-31
EF1A_MAIZE (Q41803) Elongation factor 1-alpha (EF-1-alpha) 132 2e-31
EF1A_ARATH (P13905) Elongation factor 1-alpha (EF-1-alpha) 132 2e-31
EF1A_TOBAC (P43643) Elongation factor 1-alpha (EF-1-alpha) (Vitr... 131 3e-31
EF12_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha) 131 4e-31
EF11_HORVU (P34824) Elongation factor 1-alpha (EF-1-alpha) 131 4e-31
EF1A_LYCES (P17786) Elongation factor 1-alpha (EF-1-alpha) 129 1e-30
EF11_DAUCA (P29521) Elongation factor 1-alpha (EF-1-alpha) 127 7e-30
EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) 124 4e-29
EF1A_COCIM (Q96WZ1) Elongation factor 1-alpha (EF-1-alpha) 107 6e-24
EF1A_YARLI (O59949) Elongation factor 1-alpha (EF-1-alpha) 106 9e-24
EF1A_ARXAD (P41745) Elongation factor 1-alpha (EF-1-alpha) 104 5e-23
EF13_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-1... 103 8e-23
EF12_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1... 103 8e-23
EF1A_CANAL (P16017) Elongation factor 1-alpha (EF-1-alpha) 103 1e-22
>EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 134 bits (337), Expect = 4e-32
Identities = 66/74 (89%), Positives = 70/74 (94%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAGFVKMIPTKPMVVETFSEYP LGRFAVRDMRQTV GVIK+VEKK
Sbjct: 373 KELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAQKK 446
>EF1A_MANES (O49169) Elongation factor 1-alpha (EF-1-alpha)
Length = 449
Score = 133 bits (335), Expect = 7e-32
Identities = 66/74 (89%), Positives = 69/74 (93%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAGFVKMIPTKPMVVETFS YP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+PSGAKVTK+A KK
Sbjct: 433 DPSGAKVTKSAAKK 446
>EF1A_VICFA (O24534) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 133 bits (334), Expect = 9e-32
Identities = 66/74 (89%), Positives = 69/74 (93%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KEIEKEPKFLKNGDAG VKMIPTKPMVVETF+EYP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAAKK 446
>EF1A_PEA (Q41011) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 133 bits (334), Expect = 9e-32
Identities = 66/74 (89%), Positives = 69/74 (93%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KEIEKEPKFLKNGDAG VKMIPTKPMVVETF+EYP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAAKK 446
>EF12_DAUCA (P34823) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 133 bits (334), Expect = 9e-32
Identities = 65/74 (87%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAGFVKMIPTKPMVVETF YP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA+KK
Sbjct: 433 DPTGAKVTKAAIKK 446
>EF1A_ORYSA (O64937) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 132 bits (331), Expect = 2e-31
Identities = 65/74 (87%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAG VKMIPTKPMVVETFSEYP LGRFAVRDMRQTV GVIK+VEKK
Sbjct: 373 KELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAARKK 446
>EF1A_MAIZE (Q41803) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 132 bits (331), Expect = 2e-31
Identities = 64/74 (86%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAG VKM+PTKPMVVETFS+YP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAAKK 446
>EF1A_ARATH (P13905) Elongation factor 1-alpha (EF-1-alpha)
Length = 449
Score = 132 bits (331), Expect = 2e-31
Identities = 65/74 (87%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KEIEKEPKFLKNGDAG VKM PTKPMVVETFSEYP LGRFAVRDMRQTV GVIKSV+KK
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA+KK
Sbjct: 433 DPTGAKVTKAAVKK 446
>EF1A_TOBAC (P43643) Elongation factor 1-alpha (EF-1-alpha)
(Vitronectin-like adhesion protein 1) (PVN1)
Length = 447
Score = 131 bits (330), Expect = 3e-31
Identities = 65/74 (87%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KEIEKEPKFLKNGDAG VKMIPTKPMVVETFSEYP LGRFAVRDMRQTV GVIK+V+KK
Sbjct: 373 KEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAQKK 446
>EF12_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 131 bits (329), Expect = 4e-31
Identities = 64/74 (86%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+E PKFLKNGDAGFVKMIPTKPMVVETF++YP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
EP+GAKVTKAA+KK
Sbjct: 433 EPTGAKVTKAAIKK 446
>EF11_HORVU (P34824) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 131 bits (329), Expect = 4e-31
Identities = 64/74 (86%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+E PKFLKNGDAGFVKMIPTKPMVVETF++YP LGRFAVRDMRQTV GVIKSVEKK
Sbjct: 373 KELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKK 432
Query: 62 EPSGAKVTKAALKK 75
EP+GAKVTKAA+KK
Sbjct: 433 EPTGAKVTKAAIKK 446
>EF1A_LYCES (P17786) Elongation factor 1-alpha (EF-1-alpha)
Length = 448
Score = 129 bits (324), Expect = 1e-30
Identities = 62/74 (83%), Positives = 69/74 (92%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAG VKMIPTKPMVVETF+EYP LGRFAVRDMRQTV GV+K+V+KK
Sbjct: 373 KELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAQKK 446
>EF11_DAUCA (P29521) Elongation factor 1-alpha (EF-1-alpha)
Length = 449
Score = 127 bits (318), Expect = 7e-30
Identities = 62/74 (83%), Positives = 68/74 (91%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+EKEPKFLKNGDAG VKM+PTKPMVVETF+EYP LGRFAVR MRQTV GVIK+VEKK
Sbjct: 373 KELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA KK
Sbjct: 433 DPTGAKVTKAAAKK 446
>EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha)
Length = 447
Score = 124 bits (311), Expect = 4e-29
Identities = 61/74 (82%), Positives = 66/74 (88%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
KE+E PKFLKNGDAG VKMIPTKPMVVETF+ YP LGRFAVRDMRQTV GVIK VEKK
Sbjct: 373 KELEALPKFLKNGDAGIVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKGVEKK 432
Query: 62 EPSGAKVTKAALKK 75
+P+GAKVTKAA+KK
Sbjct: 433 DPTGAKVTKAAIKK 446
>EF1A_COCIM (Q96WZ1) Elongation factor 1-alpha (EF-1-alpha)
Length = 460
Score = 107 bits (267), Expect = 6e-24
Identities = 51/73 (69%), Positives = 59/73 (79%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K +E PKF+K+GDA VKM+P+KPM VE F++YP LGRFAVRDMRQTV GVIKSVEK
Sbjct: 384 KSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKS 443
Query: 62 EPSGAKVTKAALK 74
E +G KVTKAA K
Sbjct: 444 EKTGGKVTKAAQK 456
>EF1A_YARLI (O59949) Elongation factor 1-alpha (EF-1-alpha)
Length = 460
Score = 106 bits (265), Expect = 9e-24
Identities = 51/73 (69%), Positives = 60/73 (81%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K++E PKF+K+GDA VKM+P+KPM VE F+EYP LGRFAVRDMRQTV GVIKSVEK
Sbjct: 384 KKMEDSPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKSVEKS 443
Query: 62 EPSGAKVTKAALK 74
+ +G KVTKAA K
Sbjct: 444 DKAGGKVTKAAQK 456
>EF1A_ARXAD (P41745) Elongation factor 1-alpha (EF-1-alpha)
Length = 459
Score = 104 bits (259), Expect = 5e-23
Identities = 51/73 (69%), Positives = 58/73 (78%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K++E PKF+K GDA V+MIP+KPM VETF+EYP LGRFAVRDMRQTV GVIKSVEK
Sbjct: 383 KKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKS 442
Query: 62 EPSGAKVTKAALK 74
+ KVTKAA K
Sbjct: 443 DKGAGKVTKAAQK 455
>EF13_XENLA (P17508) Elongation factor 1-alpha, oocyte form
(EF-1-alpha-O1) (EF-1AO1)
Length = 461
Score = 103 bits (257), Expect = 8e-23
Identities = 51/73 (69%), Positives = 59/73 (79%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K++E +PKFLK+GDA V+MIP KPM VETFS+YP LGRFAVRDMRQTV GVIK V+KK
Sbjct: 385 KKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444
Query: 62 EPSGAKVTKAALK 74
S KVTK+A K
Sbjct: 445 LASSGKVTKSAAK 457
>EF12_XENLA (P17507) Elongation factor 1-alpha, oocyte form
(EF-1-alpha-O) (EF-1AO) (42S p48)
Length = 461
Score = 103 bits (257), Expect = 8e-23
Identities = 50/73 (68%), Positives = 60/73 (81%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K++E +PKFLK+GDA V+MIP KPM VE+FS+YP LGRFAVRDMRQTV GVIK V+KK
Sbjct: 385 KKLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444
Query: 62 EPSGAKVTKAALK 74
S KVTK+A+K
Sbjct: 445 AASSGKVTKSAVK 457
>EF1A_CANAL (P16017) Elongation factor 1-alpha (EF-1-alpha)
Length = 458
Score = 103 bits (256), Expect = 1e-22
Identities = 51/73 (69%), Positives = 61/73 (82%), Gaps = 1/73 (1%)
Query: 2 KEIEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPLLGRFAVRDMRQTVVTGVIKSVEKK 61
K++E+ PKF+K+GDA VKM+PTKPM VE F++YP LGRFAVRDMRQTV GVIKSVEK
Sbjct: 383 KKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKS 442
Query: 62 EPSGAKVTKAALK 74
+ +G KVTKAA K
Sbjct: 443 DKAG-KVTKAAQK 454
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.133 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,234,198
Number of Sequences: 164201
Number of extensions: 261523
Number of successful extensions: 554
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 443
Number of HSP's gapped (non-prelim): 114
length of query: 75
length of database: 59,974,054
effective HSP length: 51
effective length of query: 24
effective length of database: 51,599,803
effective search space: 1238395272
effective search space used: 1238395272
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0192.14