BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0162a.12
         (34 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CH10_BRANA (Q96539) 10 kDa chaperonin (Protein CPN10) (Protein g...    53  2e-07
CH10_MOUSE (Q64433) 10 kDa heat shock protein, mitochondrial (Hs...    51  7e-07
CH10_ARATH (P34893) 10 kDa chaperonin (Protein CPN10) (Protein g...    51  7e-07
CH10_RAT (P26772) 10 kDa heat shock protein, mitochondrial (Hsp1...    50  1e-06
CH10_HUMAN (P61604) 10 kDa heat shock protein, mitochondrial (Hs...    50  1e-06
CH10_BOVIN (P61603) 10 kDa heat shock protein, mitochondrial (Hs...    50  1e-06
CH10_ORYLA (Q9W6X3) 10 kDa heat shock protein, mitochondrial (Hs...    47  8e-06
CH10_SCHPO (O59804) 10 kDa heat shock protein, mitochondrial (HS...    47  1e-05
CH10_BRECH (Q8RU01) 10 kDa chaperonin (Protein Cpn10) (groES pro...    43  1e-04
CH10_CHRVI (P31295) 10 kDa chaperonin (Protein Cpn10) (groES pro...    43  2e-04
CH10_CAMJE (P56970) 10 kDa chaperonin (Protein Cpn10) (groES pro...    42  4e-04
CH10_BACHD (O50304) 10 kDa chaperonin (Protein Cpn10) (groES pro...    42  4e-04
CH10_BACTR (Q8VV85) 10 kDa chaperonin (Protein Cpn10) (groES pro...    41  6e-04
CH10_BACST (Q07200) 10 kDa chaperonin (Protein Cpn10) (groES pro...    41  6e-04
CH10_YEAST (P38910) 10 kDa heat shock protein, mitochondrial (HS...    41  7e-04
CH10_THETN (Q8R5T8) 10 kDa chaperonin (Protein Cpn10) (groES pro...    41  7e-04
CH10_THEBR (Q60023) 10 kDa chaperonin (Protein Cpn10) (groES pro...    41  7e-04
CH10_FRATU (P94797) 10 kDa chaperonin (Protein Cpn10) (groES pro...    40  0.001
CH10_CLOAB (P30719) 10 kDa chaperonin (Protein Cpn10) (groES pro...    40  0.001
CH11_RHOPA (P60366) 10 kDa chaperonin 1 (Protein Cpn10 1) (groES...    40  0.002

>CH10_BRANA (Q96539) 10 kDa chaperonin (Protein CPN10) (Protein
          groES)
          Length = 98

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP YGG+Q+KL +KE+ LFRDED+LG L
Sbjct: 63 GDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTL 95


>CH10_MOUSE (Q64433) 10 kDa heat shock protein, mitochondrial
          (Hsp10) (10 kDa chaperonin) (CPN10)
          Length = 101

 Score = 50.8 bits (120), Expect = 7e-07
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 97


>CH10_ARATH (P34893) 10 kDa chaperonin (Protein CPN10) (Protein
          groES)
          Length = 98

 Score = 50.8 bits (120), Expect = 7e-07
 Identities = 22/33 (66%), Positives = 27/33 (81%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VLLP YGG+Q+KL + E+ LFRDED+LG L
Sbjct: 63 GDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTL 95


>CH10_RAT (P26772) 10 kDa heat shock protein, mitochondrial
          (Hsp10) (10 kDa chaperonin) (CPN10)
          Length = 101

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 97


>CH10_HUMAN (P61604) 10 kDa heat shock protein, mitochondrial
          (Hsp10) (10 kDa chaperonin) (CPN10) (Early-pregnancy
          factor) (EPF)
          Length = 101

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 97


>CH10_BOVIN (P61603) 10 kDa heat shock protein, mitochondrial
          (Hsp10) (10 kDa chaperonin) (CPN10)
          Length = 101

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 21/31 (67%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          GD+VLLP YGG+++ LDDK++ LFRD DILG
Sbjct: 67 GDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 97


>CH10_ORYLA (Q9W6X3) 10 kDa heat shock protein, mitochondrial
          (Hsp10) (10 kDa chaperonin) (CPN10)
          Length = 99

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 19/31 (61%), Positives = 27/31 (86%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILG 31
          G++VLLP YGG+++ L+DK++ LFRD DILG
Sbjct: 65 GEKVLLPQYGGTKVVLEDKDYFLFRDADILG 95


>CH10_SCHPO (O59804) 10 kDa heat shock protein, mitochondrial
           (HSP10) (10 kDa chaperonin)
          Length = 104

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 1   GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
           GD+VLLPAYGGS IK+ ++E+ L+RD ++L I+
Sbjct: 70  GDRVLLPAYGGSNIKVGEEEYSLYRDHELLAII 102


>CH10_BRECH (Q8RU01) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 27/34 (79%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGILG 34
          GD+V+   Y G+++K+D+KE+L+ R+ DIL I+G
Sbjct: 61 GDKVIFSKYAGTEVKVDNKEYLVLRESDILAIIG 94


>CH10_CHRVI (P31295) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 96

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD VL   Y G+++KLD KEFL+ R+EDI+ ++
Sbjct: 62 GDSVLFGKYSGTEVKLDGKEFLVMREEDIMAVV 94


>CH10_CAMJE (P56970) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 86

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 17/33 (51%), Positives = 26/33 (78%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD+++   YGG++IKLD+ E+L+   +DILGIL
Sbjct: 53 GDKIVFAKYGGTEIKLDNNEYLVLNLDDILGIL 85


>CH10_BACHD (O50304) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGILG 34
          GD V+   Y G+++K D KE+L+ R+ DIL I+G
Sbjct: 61 GDSVIFSKYAGTEVKYDGKEYLILRESDILAIIG 94


>CH10_BACTR (Q8VV85) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 25/34 (73%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGILG 34
          GD+++   Y G+++K D KE+L+ R+ DIL ++G
Sbjct: 61 GDRIIFSKYAGTEVKYDGKEYLILRESDILAVIG 94


>CH10_BACST (Q07200) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 14/34 (41%), Positives = 25/34 (73%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGILG 34
          GD+++   Y G+++K D KE+L+ R+ DIL ++G
Sbjct: 61 GDRIIFSKYAGTEVKYDGKEYLILRESDILAVIG 94


>CH10_YEAST (P38910) 10 kDa heat shock protein, mitochondrial
           (HSP10) (10 kDa chaperonin)
          Length = 106

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 20/31 (64%), Positives = 25/31 (80%), Gaps = 1/31 (3%)

Query: 1   GDQVLLPAYGGSQIKL-DDKEFLLFRDEDIL 30
           GDQVL+P +GGS IKL +D E +LFRD +IL
Sbjct: 70  GDQVLIPQFGGSTIKLGNDDEVILFRDAEIL 100


>CH10_THETN (Q8R5T8) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD+V+   Y G+++KLD +E+LL R+ DIL I+
Sbjct: 61 GDRVIFSKYAGTEVKLDGEEYLLLRESDILAII 93


>CH10_THEBR (Q60023) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 94

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD+V+   Y G+++KLD +E+LL R+ DIL I+
Sbjct: 61 GDRVIFSKYAGTEVKLDGEEYLLLRESDILAII 93


>CH10_FRATU (P94797) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 95

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD+VL   Y GS++K+ D+  L+ R+EDI+GI+
Sbjct: 62 GDKVLFGKYSGSEVKVGDETLLMMREEDIMGII 94


>CH10_CLOAB (P30719) 10 kDa chaperonin (Protein Cpn10) (groES
          protein)
          Length = 95

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 16/33 (48%), Positives = 25/33 (75%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGIL 33
          GD+V    Y G++IK+D++E L+ R +DILGI+
Sbjct: 61 GDKVFFSKYSGTEIKVDNEELLILRQDDILGIV 93


>CH11_RHOPA (P60366) 10 kDa chaperonin 1 (Protein Cpn10 1) (groES
          protein 1)
          Length = 98

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 15/34 (44%), Positives = 26/34 (76%)

Query: 1  GDQVLLPAYGGSQIKLDDKEFLLFRDEDILGILG 34
          GD+VL   + G++IKLD +E L+ ++ DI+G++G
Sbjct: 65 GDRVLFGKWSGTEIKLDGEELLIMKESDIMGVVG 98


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.154    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,315,832
Number of Sequences: 164201
Number of extensions: 92353
Number of successful extensions: 308
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 134
length of query: 34
length of database: 59,974,054
effective HSP length: 10
effective length of query: 24
effective length of database: 58,332,044
effective search space: 1399969056
effective search space used: 1399969056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)