BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0133.10
         (382 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

T230_HUMAN (Q93074) Thyroid hormone receptor-associated protein ...    59  3e-08
BIB_DROME (P23645) Neurogenic protein big brain                        53  1e-06
CCF_DROME (P41046) Centrosomal and chromosomal factor (CCF) (Chr...    47  6e-05
PO62_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2        47  8e-05
PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (Early developme...    47  1e-04
ARFF_ARATH (Q9ZTX8) Auxin response factor 6                            47  1e-04
PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (Early developme...    46  1e-04
YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4...    46  2e-04
BTD_DROME (Q24266) Transcription factor BTD (Buttonhead protein)       45  3e-04
IXR1_YEAST (P33417) Intrastrand crosslink recognition protein (S...    45  4e-04
CLOC_DROME (O61735) Circadian locomoter output cycles Kaput prot...    45  4e-04
SAB1_HUMAN (Q01826) DNA-binding protein SATB1 (Special AT-rich s...    44  7e-04
LUG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG                  44  7e-04
P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)                        43  0.001
GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor (P...    43  0.001
YNC7_YEAST (P53968) Hypothetical 76.3 kDa zinc finger protein in...    43  0.002
GBF_DICDI (P36417) G-box binding factor (GBF)                          43  0.002
SSN6_YEAST (P14922) Glucose repression mediator protein                42  0.002
MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p...    42  0.002
MIG1_CANAL (Q9Y7G2) Regulatory protein MIG1                            42  0.002

>T230_HUMAN (Q93074) Thyroid hormone receptor-associated protein
            complex 230 kDa component (Trap230) (Activator-recruited
            cofactor 240 KDa component) (ARC240) (CAG repeat protein
            45) (OPA-containing protein) (Trinucleotide repeat
            containing 11)
          Length = 2212

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 73   QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
            Q QQ  QQ QQ ++Q +++ H  +  Q+++L   + +++     +  +   ++  +QQQQ
Sbjct: 2093 QQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQ---QQQQQQQQQQQQQQQQQQ 2149

Query: 133  QQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRR 165
            Q  QQQQQQ AP  PQ    P F + G  ++++
Sbjct: 2150 QHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQ 2182



 Score = 39.3 bits (90), Expect = 0.017
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 73   QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
            Q QQ  QQ QQ ++Q +++    +  Q++    A  + +  +  +F R  +++  +QQQ 
Sbjct: 2127 QQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQT 2186

Query: 133  QQL-QQQQQQRAPDSPQLSQNPSFDQDGRY 161
              L +Q QQQ +   PQ    PS +  GRY
Sbjct: 2187 AALVRQLQQQLSNTQPQ----PSTNIFGRY 2212



 Score = 32.7 bits (73), Expect = 1.6
 Identities = 16/31 (51%), Positives = 19/31 (60%)

Query: 121  ASMKEASEQQQQQQLQQQQQQRAPDSPQLSQ 151
            A + E  +QQQQQQ QQQQQQ+     Q  Q
Sbjct: 2081 AILPEQQQQQQQQQQQQQQQQQQQQQQQQQQ 2111



 Score = 32.0 bits (71), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 128  EQQQQQQLQQQQQQRAPDSPQLSQNPSF 155
            EQQQQQQ QQQQQQ+     Q  Q   +
Sbjct: 2085 EQQQQQQQQQQQQQQQQQQQQQQQQQQY 2112



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 51   VNSDASSHGQNLTKHGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARR 110
            V+  A ++G  LT             STQ+      Q    + T  P   + +       
Sbjct: 2034 VHQQAPTYGHGLT-------------STQRFSHQTLQQTPMISTMTPMSAQGVQAGVRST 2080

Query: 111  EIVTALKFHRASMKEASEQQQQQQLQQQQQQ 141
             I+   +  +   ++  +QQQQQQ QQQQQQ
Sbjct: 2081 AILPEQQQQQQQQQQQQQQQQQQQQQQQQQQ 2111



 Score = 30.8 bits (68), Expect = 6.0
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 114  TALKFHRASMKEASEQQQQQQLQQQQQQR 142
            TA+   +   ++  +QQQQQQ QQQQQQ+
Sbjct: 2080 TAILPEQQQQQQQQQQQQQQQQQQQQQQQ 2108


>BIB_DROME (P23645) Neurogenic protein big brain
          Length = 700

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 58/251 (23%)

Query: 25  EEEPPFSGA---YMRS--LVKQLRTNDQGCVVNSDASSHGQNLTKHGKIGKA-----CQS 74
           ++EP + G    Y RS  L +      Q     S+ + +   + + G +  A      ++
Sbjct: 379 QQEPLYGGTRSLYCRSPTLTRSNLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSLYPMRT 438

Query: 75  QQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQ 134
           QQ  QQ QQ ++QV     +S    + + N  + R E +  ++      ++  +QQQQQQ
Sbjct: 439 QQQQQQQQQQQQQVASAPQSSHLQNQNVQNQMQQRSESIYGMRGSMRGQQQPIQQQQQQQ 498

Query: 135 ---LQQQ------QQQRAPDSPQLSQNPS----------------FDQDGRYK-SRRNP- 167
              LQQQ      QQQ+    PQ+  +P                    DG +K  RR+P 
Sbjct: 499 QQQLQQQQPNMGVQQQQMQPPPQMMSDPQQQPQGFQPVYGTRTNPTPMDGNHKYDRRDPQ 558

Query: 168 RIY------------PSCNTNFSSYMGDFSSYPPAFVPNSYPVPVASPI---APPPLMAE 212
           ++Y             S ++++ SY G  +  PPA  P+  P P   P+   APPP    
Sbjct: 559 QMYGVTGPRNRGQSAQSDDSSYGSYHGS-AVTPPARHPSVEPSPPPPPMLMYAPPP---- 613

Query: 213 NPNFILPNQPL 223
            PN   P QP+
Sbjct: 614 QPNAAHP-QPI 623



 Score = 32.7 bits (73), Expect = 1.6
 Identities = 18/42 (42%), Positives = 21/42 (49%)

Query: 120 RASMKEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRY 161
           + S   A +QQQQQQ QQQQQQ+     Q  Q     Q   Y
Sbjct: 651 QGSAVTAQQQQQQQQQQQQQQQQQQQQQQQQQMMMQQQQQHY 692



 Score = 32.0 bits (71), Expect = 2.7
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 75  QQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQ 134
           Q +   PQ  + Q  R++  S P    +++   A     T  +    + ++  +QQQQQQ
Sbjct: 614 QPNAAHPQPIRTQSERKV--SAPV---VVSQPAACAVTYTTSQGSAVTAQQQQQQQQQQQ 668

Query: 135 LQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRN 166
            QQQQQQ+     Q+         G    R N
Sbjct: 669 QQQQQQQQQQQQQQMMMQQQQQHYGMLPLRPN 700


>CCF_DROME (P41046) Centrosomal and chromosomal factor (CCF)
           (Chromocentrosomin)
          Length = 550

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 65  HGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMK 124
           H  +    Q     QQ QQH +   +  +TS     R  + A  + ++  A+    A+ +
Sbjct: 54  HAAVAAHQQQLLQQQQQQQHHRHHHQPANTSSSSNSRHSHAAATQTQVAAAV----ANSR 109

Query: 125 EASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQD 158
           +  +QQQQQQ QQQQQQ A  +   +  PS  +D
Sbjct: 110 QQQQQQQQQQQQQQQQQTASSNSNTAPAPSPQKD 143



 Score = 38.1 bits (87), Expect = 0.038
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)

Query: 70  KACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQ 129
           +A  S Q  QQ QQ  +Q +++L        ++   A   ++  + ++ H         Q
Sbjct: 237 RAATSAQQQQQQQQRYQQQQQQLRQQHQQMSQMSQQAHYPQQQSSLVRQH---------Q 287

Query: 130 QQQQQLQQQQQQRAPDSPQLSQNPSFDQ 157
           QQQQQ QQQQ+  +  S + SQ+ S  Q
Sbjct: 288 QQQQQQQQQQRASSNQSQRQSQSQSQSQ 315



 Score = 31.2 bits (69), Expect = 4.6
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 108 ARREIVTALKFHRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQ 157
           ARR    A    +   ++   QQQQQQL+QQ QQ +    Q+SQ   + Q
Sbjct: 232 ARRGARAATSAQQQQQQQQRYQQQQQQLRQQHQQMS----QMSQQAHYPQ 277


>PO62_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2
          Length = 691

 Score = 47.0 bits (110), Expect = 8e-05
 Identities = 51/184 (27%), Positives = 76/184 (40%), Gaps = 19/184 (10%)

Query: 125 EASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYP---SCNTNFSSYM 181
           +  +QQQQQQ QQQQQQ+ P  P  SQ+P        +S+  P   P   S         
Sbjct: 180 QQQQQQQQQQQQQQQQQQQPPPPPTSQHPQPASQAPPQSQPTPPHQPPPASQQLPAPPAQ 239

Query: 182 GDFSSYPPAFVPNSY--------PVPVASPIAPPPLMAENPNFILPN-----QPLGLNLN 228
            + ++ P    P+S+        P P     +PP   + +P   LP+      PL L +N
Sbjct: 240 LEQATQPQQHQPHSHPQNQTQNQPSPTQQSSSPPQKPSPSPGHSLPSPLTPPNPLQL-VN 298

Query: 229 FHDFNNLDATIHLSNTSLSSNSFSSATSSSQEVPS--VELSQGDGISSLVNSTESNAASQ 286
               +   A      +  SS +F +A SS Q V    V  +QG  I ++        +SQ
Sbjct: 299 NPLASQAAAAAAAMGSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQ 358

Query: 287 VNAG 290
             +G
Sbjct: 359 AASG 362


>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (Early development
           regulator protein 1) (MPH1) (RAE-28)
          Length = 1012

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 39/145 (26%), Positives = 63/145 (42%), Gaps = 13/145 (8%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q QQ   Q +Q   Q +  +H  + +Q R   +        T L+  +   ++  +QQQQ
Sbjct: 382 QQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHT----ATHLQLAQQQQQQQQQQQQQ 437

Query: 133 QQLQQQQQQR------APDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGDFSS 186
           QQ QQQQQQ+      AP  PQ+            +  +   + P   ++  +   + +S
Sbjct: 438 QQQQQQQQQQQGTTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLTLPPEPTS 497

Query: 187 YPPAFVPNSYPVPVASPIAPPPLMA 211
            PP  + +  PV   +PI PP L A
Sbjct: 498 KPPIPIQSKPPV---APIKPPQLGA 519


>ARFF_ARATH (Q9ZTX8) Auxin response factor 6
          Length = 933

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 52/213 (24%), Positives = 96/213 (44%), Gaps = 29/213 (13%)

Query: 75  QQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQ 134
           QQ +QQ QQ  +Q +++   S+  Q++L    +                ++ S+QQQQQ 
Sbjct: 484 QQLSQQQQQLSQQQQQQQQLSQQQQQQLSQQQQ----------------QQLSQQQQQQL 527

Query: 135 LQQQQQQR---APDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSS--YMGDFSSYPP 189
            QQQQQQ     P++ Q  Q+ +  Q   + S++  ++  + N + SS   +   S +  
Sbjct: 528 SQQQQQQAYLGVPETHQ-PQSQAQSQSNNHLSQQQQQVVDNHNPSASSAAVVSAMSQFGS 586

Query: 190 AFVPNSYPVPVASPIAPPPLMAENPNFILPNQPLGLNLNFHDFNNLDATIHLSNTSLSSN 249
           A  PN+ P+   + +      ++      P  PL   L+    +     +HL+ T    N
Sbjct: 587 ASQPNTSPLQSMTSLCHQQSFSDTNGGNNPISPLHTLLSNFSQDESSQLLHLTRT----N 642

Query: 250 SFSSATSSSQEVPSVELS-QGDGISSLVNSTES 281
           S  +++    + P+V+ S Q  G  +  N+T+S
Sbjct: 643 SAMTSSGWPSKRPAVDSSFQHSGAGN--NNTQS 673



 Score = 30.8 bits (68), Expect = 6.0
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 123 MKEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMG 182
           M +    QQQQQL QQQQQ+   S Q  Q  S  Q  +   ++  ++  S      +Y+G
Sbjct: 481 MLQQQLSQQQQQLSQQQQQQQQLSQQQQQQLSQQQQQQLSQQQQQQL--SQQQQQQAYLG 538

Query: 183 DFSSYPP 189
              ++ P
Sbjct: 539 VPETHQP 545


>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (Early development
           regulator protein 1) (HPH1)
          Length = 1004

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 44/165 (26%), Positives = 68/165 (40%), Gaps = 28/165 (16%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q QQ   Q +Q   Q +  +H  + +Q R   +             H A+  + ++QQQQ
Sbjct: 382 QQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQL------------LHTATHLQLAQQQQQ 429

Query: 133 QQLQQQQQQR-------APDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGDFS 185
           QQ QQQQQQ+       AP  PQ+            +  +   + P   ++  S   D +
Sbjct: 430 QQQQQQQQQQPQATTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAA 489

Query: 186 SYPPAFVPNSYPVPVASPIAPPPL------MAENPNFILPNQPLG 224
             PP  + +  PV   +PI PP L       A+ P   +P Q +G
Sbjct: 490 PKPPIPIQSKPPV---APIKPPQLGAAKMSAAQQPPPHIPVQVVG 531


>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4
           intergenic region
          Length = 738

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 16/131 (12%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVT------------ALKFHR 120
           Q QQ  QQPQQ ++Q++++    +  Q+ +   A+A+ E ++            A + H+
Sbjct: 406 QQQQQPQQPQQPQQQLQQQ---QQQQQQPVQAQAQAQEEQLSQNYYTQQQQQQYAQQQHQ 462

Query: 121 ASMKEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSY 180
              +  S+QQQ  Q QQQ  Q     PQ  Q+P   + G   + +   +Y +    + SY
Sbjct: 463 LQQQYLSQQQQYAQQQQQHPQPQSQQPQSQQSPQSQKQGNNVAAQQYYMYQNQFPGY-SY 521

Query: 181 MGDFSSYPPAF 191
            G F S   A+
Sbjct: 522 PGMFDSQGYAY 532



 Score = 35.8 bits (81), Expect = 0.19
 Identities = 23/90 (25%), Positives = 39/90 (42%), Gaps = 8/90 (8%)

Query: 76  QSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREI--------VTALKFHRASMKEAS 127
           +  Q+  + K+QV+    T+   ++   N+A    E+        ++A+       +  +
Sbjct: 320 EEVQEEAEKKEQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEKVEISAVISEPPEDQANT 379

Query: 128 EQQQQQQLQQQQQQRAPDSPQLSQNPSFDQ 157
             Q QQQ QQ QQ + P  PQ  Q P   Q
Sbjct: 380 VPQPQQQSQQPQQPQQPQQPQQPQQPQQQQ 409



 Score = 30.4 bits (67), Expect = 7.8
 Identities = 21/79 (26%), Positives = 32/79 (39%), Gaps = 4/79 (5%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q Q +   P++    V  ++  S    E      E +   V   +      ++  + QQ 
Sbjct: 344 QEQDNVAAPEEEVTVVEEKVEISAVISEP----PEDQANTVPQPQQQSQQPQQPQQPQQP 399

Query: 133 QQLQQQQQQRAPDSPQLSQ 151
           QQ QQ QQQ+ P  PQ  Q
Sbjct: 400 QQPQQPQQQQQPQQPQQPQ 418


>BTD_DROME (Q24266) Transcription factor BTD (Buttonhead protein)
          Length = 644

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 51/220 (23%), Positives = 88/220 (39%), Gaps = 24/220 (10%)

Query: 75  QQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQ 134
           QQ   Q QQH +Q +  LH  +      L+  +A+++ +  L   +   ++  +QQQQQQ
Sbjct: 20  QQQHAQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQHMQHLTQQQQQQQQQQQQQQQQQ 79

Query: 135 LQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGDFSSYPPAFVPN 194
            QQQQ       PQ  Q+          +   P      ++  SS        PP  +  
Sbjct: 80  QQQQQ-------PQQQQHDFLSAAALLSA---PPSLSGSSSGSSSGSSPLYGKPPMKLEL 129

Query: 195 SYPVPVASPIAPPPLMAENPNFILPNQPLGLNLNFHDFNNLDATIHLSNTSLSSNSFSSA 254
            YP   ++  A       +PN  + + P   +++   F +          S +S S S +
Sbjct: 130 PYPQASSTGTA-------SPNSSIQSAPSSASVSPSIFPS-------PAQSFASISASPS 175

Query: 255 TSSSQEVPSVELSQGDGISSLVNSTESNAASQVNAGLHAA 294
           T ++   P    + G    S  +S+ S++A+   A   AA
Sbjct: 176 TPTTTLAPPTTAAAGALAGSPTSSSPSSSAASAAAAAAAA 215


>IXR1_YEAST (P33417) Intrastrand crosslink recognition protein
           (Structure-specific recognition protein) (SSRP)
          Length = 597

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 62/232 (26%), Positives = 81/232 (34%), Gaps = 67/232 (28%)

Query: 125 EASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGDF 184
           +  +QQQQQQ QQQQQQ+AP      Q+P   Q   Y                       
Sbjct: 56  QPQQQQQQQQQQQQQQQQAPYQGHFQQSPQQQQQNVY----------------------- 92

Query: 185 SSYPPAFVPNSYPVPVASPIAPPPLMAENPNFILPNQPLGLNLNFHDFNNLDA------- 237
                      YP+P  S   P     +        Q    N N ++  N++A       
Sbjct: 93  -----------YPLPPQSLTQPTSQSQQQQQQQQQQQYANSNSNSNNNVNVNALPQDFGY 141

Query: 238 -----------TIHLSNTSLSSNSFSSATSSSQEVPSV--------ELSQGDGISSLVNS 278
                      TI+    S   NSF S  +  Q  PSV          S  + +SS  NS
Sbjct: 142 MQQTGSGQNYPTINQQQFSEFYNSFLSHLTQKQTNPSVTGTGASSNNNSNNNNVSSGNNS 201

Query: 279 TESN----AASQVN---AGLHAAMDEEAIAEIRSLGEQYQMEWNDTMNLVKS 323
           T SN    AASQ+N   A   AA +    A   S   Q Q  + + MN + S
Sbjct: 202 TSSNPAQLAASQLNPATAAAAAANNAAGPASYLSQLPQVQRYYPNNMNALSS 253



 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 65/262 (24%), Positives = 103/262 (38%), Gaps = 28/262 (10%)

Query: 47  QGCVVNSDASSHGQNLTKHGKIGK-ACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNM 105
           QG   N        + T H  + +   Q QQ  QQ QQ ++Q ++      PYQ      
Sbjct: 29  QGLEHNDSQYRDASHQTPHQYLNQFQAQPQQQQQQQQQQQQQQQQA-----PYQGHFQQS 83

Query: 106 AEARREIVTALKFHRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFD---QD-GRY 161
            + +++ V        S+ + + Q QQQQ QQQQQQ A  +   + N + +   QD G  
Sbjct: 84  PQQQQQNVY-YPLPPQSLTQPTSQSQQQQQQQQQQQYANSNSNSNNNVNVNALPQDFGYM 142

Query: 162 KSRRNPRIYPSCN-TNFSSYMGDFSSYPPAFVPNSYPVPVASPIAPPPLMAENPNFILPN 220
           +   + + YP+ N   FS +   F S+      N     V    A     + N N    N
Sbjct: 143 QQTGSGQNYPTINQQQFSEFYNSFLSHLTQKQTNP---SVTGTGASSNNNSNNNNVSSGN 199

Query: 221 QPLGLN---LNFHDFNNLDATIHLSNTSLSSNSFSSATSSSQEVPSVEL---SQGDGISS 274
                N   L     N   A    +N +    S+ S      ++P V+    +  + +SS
Sbjct: 200 NSTSSNPAQLAASQLNPATAAAAAANNAAGPASYLS------QLPQVQRYYPNNMNALSS 253

Query: 275 LVN-STESNAASQVNAGLHAAM 295
           L++ S+  NAA   N   H  +
Sbjct: 254 LLDPSSAGNAAGNANTATHPGL 275



 Score = 33.9 bits (76), Expect = 0.71
 Identities = 29/118 (24%), Positives = 56/118 (46%), Gaps = 13/118 (11%)

Query: 80  QPQ--QHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQLQQ 137
           QPQ   H++Q++++L   +  Q++L    + +++       H+   ++  +QQ     QQ
Sbjct: 281 QPQLTHHQQQMQQQLQLQQ--QQQLQQQQQLQQQ-------HQLQQQQQLQQQHHHLQQQ 331

Query: 138 QQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGD--FSSYPPAFVP 193
           QQQQ+ P   +LS   S  +  +   ++ P+   S    FS  + +     +P A VP
Sbjct: 332 QQQQQHPVVKKLSSTQSRIERRKQLKKQGPKRPSSAYFLFSMSIRNELLQQFPEAKVP 389


>CLOC_DROME (O61735) Circadian locomoter output cycles Kaput protein
           (dCLOCK) (dPAS1)
          Length = 1027

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 69  GKACQSQQS-TQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEAS 127
           G A  S+Q   QQ QQ   Q ++ LHT   +  +  + + ++ +  T  +  +   ++  
Sbjct: 751 GFALNSEQMLNQQDQQMMMQQQQNLHTQHQHNLQQQHQSHSQLQQHTQQQHQQQQQQQQQ 810

Query: 128 EQQQQQQLQQQQQQRAPDSPQLSQ 151
           +QQQQQQ QQQQQQ+     Q  Q
Sbjct: 811 QQQQQQQQQQQQQQQQQQQQQQQQ 834



 Score = 37.4 bits (85), Expect = 0.064
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 14/112 (12%)

Query: 41  QLRTNDQGCVVNSDASSHGQNLTKHGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQE 100
           Q + N  G  +NS+   + Q+     +  +   +Q      QQH+   + + HT + +Q+
Sbjct: 744 QPQFNQYGFALNSEQMLNQQDQQMMMQQQQNLHTQHQHNLQQQHQSHSQLQQHTQQQHQQ 803

Query: 101 RLLNMAEARREIVTALKFHRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQN 152
           +     + +++                +QQQQQQ QQQQQQ+        QN
Sbjct: 804 QQQQQQQQQQQ--------------QQQQQQQQQQQQQQQQQQQQLQLQQQN 841


>SAB1_HUMAN (Q01826) DNA-binding protein SATB1 (Special AT-rich
           sequence binding protein 1)
          Length = 763

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 28/81 (34%), Positives = 36/81 (43%), Gaps = 17/81 (20%)

Query: 125 EASEQQQQQQLQQQQQQRAPDSPQLSQNP-----------------SFDQDGRYKSRRNP 167
           E  +QQQQQQ QQQQQQ+AP  PQ  Q P                   D++ R K+R   
Sbjct: 590 EQIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPRT 649

Query: 168 RIYPSCNTNFSSYMGDFSSYP 188
           +I         S++ D   YP
Sbjct: 650 KISVEALGILQSFIQDVGLYP 670


>LUG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG
          Length = 931

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 43  RTNDQGCVVNSDASSHGQNLTKHGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERL 102
           RTN++   V +          +  ++ ++   Q S QQ QQ ++Q++         Q+ L
Sbjct: 66  RTNEKHSEVAASYIETQMIKAREQQLQQSQHPQVSQQQQQQQQQQIQM--------QQLL 117

Query: 103 LNMAEARREIVTALKFHRASMKEASEQQQQQQLQQQQQ-QRAPDSPQLSQ 151
           L  A+ +++       H    ++  +QQQQQQ QQQQQ Q  P S Q  Q
Sbjct: 118 LQRAQQQQQQQQQQHHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQ 167



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 20/74 (27%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q QQ  QQ QQ ++Q +++ H ++P  ++                      ++++ Q QQ
Sbjct: 136 QQQQQQQQQQQQQQQQQQQQHQNQPPSQQ--------------------QQQQSTPQHQQ 175

Query: 133 QQLQQQQQQRAPDS 146
           Q   QQQ QR   S
Sbjct: 176 QPTPQQQPQRRDGS 189



 Score = 30.4 bits (67), Expect = 7.8
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 18/134 (13%)

Query: 20  LSRNLEEEPPFSGAYMRSLV-----KQLRTNDQGCVVNSDASSHGQNLTKHGKIGKACQS 74
           ++R  E+    + +Y+ + +     +QL+ +    V         Q +     + +  Q 
Sbjct: 64  IARTNEKHSEVAASYIETQMIKAREQQLQQSQHPQVSQQQQQQQQQQIQMQQLLLQRAQQ 123

Query: 75  QQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQ 134
           QQ  QQ Q H  Q +++    +  Q++                    +   + +QQQQ  
Sbjct: 124 QQQQQQQQHHHHQQQQQQQQQQQQQQQQQQQ-------------QHQNQPPSQQQQQQST 170

Query: 135 LQQQQQQRAPDSPQ 148
            Q QQQ      PQ
Sbjct: 171 PQHQQQPTPQQQPQ 184


>P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)
          Length = 280

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 23/140 (16%)

Query: 99  QERLLNMAEARREIVTALKFHRASMKEASEQQQQQ--QLQQQQQQRAPDSPQLSQ--NPS 154
           ++RLL   E + +I   L+         S+QQ+QQ  ++  QQ Q  P  PQ+ Q   P 
Sbjct: 99  EKRLLEEKERQEQIAEQLQ-------RISDQQEQQTVEIDPQQSQAQPSQPQVQQPLQPQ 151

Query: 155 FDQDGRYKSRRNPRIYPSCNTNFSSYMGDFSSYPPAFVPNSYPVPVASP-IAPP---PLM 210
           F Q       R P + P+ N N     G F+     F P++   P  +P +  P   P M
Sbjct: 152 FQQ-------RVPLLRPAFNPNMQQRPG-FNQPNQQFQPHNNFNPRMNPNMQRPGFNPNM 203

Query: 211 AENPNFILPNQPLGLNLNFH 230
            + P F  PNQ    + NF+
Sbjct: 204 QQRPGFNQPNQQFQPHNNFN 223


>GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor
           (Prolamin)
          Length = 313

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 29/81 (35%), Positives = 43/81 (52%), Gaps = 1/81 (1%)

Query: 77  STQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQLQ 136
           S+Q  QQ   Q+ ++L   +  Q    +  +A   +V A+  H+   ++  +QQQQQQLQ
Sbjct: 165 SSQVLQQSTYQLLQQLCCQQLLQIPEQSRCQAIHNVVHAIIMHQQEQQQQLQQQQQQQLQ 224

Query: 137 QQQQQRAPDSPQLSQNPSFDQ 157
           QQQQQ+     Q S   SF Q
Sbjct: 225 QQQQQQ-QQQQQPSSQVSFQQ 244



 Score = 32.3 bits (72), Expect = 2.1
 Identities = 14/21 (66%), Positives = 18/21 (85%)

Query: 122 SMKEASEQQQQQQLQQQQQQR 142
           S ++A +QQQQQQ QQQQQQ+
Sbjct: 117 SQQQAQQQQQQQQQQQQQQQQ 137



 Score = 31.6 bits (70), Expect = 3.5
 Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 11/100 (11%)

Query: 124 KEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGD 183
           K  S+QQ Q+Q+   QQQ+ P      Q   F     Y     P+ +PS        +  
Sbjct: 28  KNPSQQQPQEQVPLVQQQQFP-----GQQQQFPPQQPYP---QPQPFPSQQPYLQ--LQP 77

Query: 184 FSSYPPAFVPNSYPVPVASPIAPPPLMAENPNFILPNQPL 223
           F    P      YP P + P    P   + P ++ P QP+
Sbjct: 78  FPQPQPFLPQLPYPQPQSFP-PQQPYPQQRPKYLQPQQPI 116


>YNC7_YEAST (P53968) Hypothetical 76.3 kDa zinc finger protein in
           KTR5-UME3 intergenic region
          Length = 678

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 45/161 (27%), Positives = 67/161 (40%), Gaps = 30/161 (18%)

Query: 124 KEASEQQQQQQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNF------ 177
           ++  +QQQQQQ QQQQQQ+   + ++ Q+ +F  D       N    PS    F      
Sbjct: 121 QQLQQQQQQQQQQQQQQQKQTPTLKVEQSDTFQWDDILTPADNQH-RPSLTNQFLSPRSN 179

Query: 178 -----------SSYMGDFSSYPPAFVPNSYPVPVASPIAPPPLMAENPNF------ILPN 220
                      S+Y    S+Y     P  YP  + S  A   L A N +F         N
Sbjct: 180 YDGTTRSSGIDSNYSDTESNY---HTPYLYPQDLVSSPAMSHLTANNDDFDDLLSVASMN 236

Query: 221 QPLGLNLNFHDF---NNLDATIHLSNTSLSSNSFSSATSSS 258
               L +N H +   +NLD    L + + S N+  SA+++S
Sbjct: 237 SNYLLPVNSHGYKHISNLDELDDLLSLTYSDNNLLSASNNS 277


>GBF_DICDI (P36417) G-box binding factor (GBF)
          Length = 708

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 22/80 (27%), Positives = 39/80 (48%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q  Q  QQ  QH +Q++++ H  +  Q++  +    +++    ++ H+    +   QQQQ
Sbjct: 138 QHHQQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQ 197

Query: 133 QQLQQQQQQRAPDSPQLSQN 152
           QQ Q QQQ       Q  Q+
Sbjct: 198 QQQQHQQQHHQQQQQQQQQH 217



 Score = 42.0 bits (97), Expect = 0.003
 Identities = 32/142 (22%), Positives = 57/142 (39%), Gaps = 12/142 (8%)

Query: 26  EEPPFSGAYMRSLVKQLRTNDQGCVVNSDASSHGQNLTK--HGKIGKACQSQQSTQQPQQ 83
           + P ++  Y    ++Q    +Q    N     H Q   +  H +  +  Q  Q  QQ QQ
Sbjct: 108 QNPHYNYQYQLMFMQQQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQQQQ 167

Query: 84  HKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQLQQQQQQRA 143
           H +Q++++ H  +    +L                H+   ++   QQQ  Q QQQQQQ+ 
Sbjct: 168 HHQQMQQQQHHQQMQHHQLQQHQHQ----------HQQQQQQQQHQQQHHQQQQQQQQQH 217

Query: 144 PDSPQLSQNPSFDQDGRYKSRR 165
               Q  Q+    Q  ++  ++
Sbjct: 218 HQQQQHHQHSQPQQQHQHNQQQ 239



 Score = 38.1 bits (87), Expect = 0.038
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 7/124 (5%)

Query: 58  HGQNLTKHGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALK 117
           H Q +  H       Q  Q   Q QQ ++Q +++ H  +  Q++  +  +   +     +
Sbjct: 177 HHQQMQHH-----QLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQQQQHHQHSQPQQ 231

Query: 118 FHRASMKEASEQQQQQQLQQQQQ-QRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTN 176
            H+ + ++  +  QQQ  QQQ Q Q  P  PQ   N S + +    +  N     + N N
Sbjct: 232 QHQHNQQQQHQHNQQQHQQQQNQIQMVPQQPQSLSN-SGNNNNNNNNNNNSNNNNNNNNN 290

Query: 177 FSSY 180
            +S+
Sbjct: 291 NNSH 294



 Score = 35.4 bits (80), Expect = 0.24
 Identities = 21/101 (20%), Positives = 42/101 (40%), Gaps = 7/101 (6%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q  Q  Q PQQ+++Q   +    +P   + +   +  +++    + H+   ++   QQ Q
Sbjct: 123 QQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQQQHHQQMQ 182

Query: 133 -------QQLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRN 166
                  Q   QQQQQ+     Q  Q     Q   ++ +++
Sbjct: 183 HHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQQQQH 223



 Score = 35.0 bits (79), Expect = 0.32
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 58  HGQNLTKHGKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALK 117
           H Q + +  +  +  Q QQ  QQ Q H+ Q  +  H  +  Q++  +  +  ++     +
Sbjct: 158 HHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQ--HQQQHHQQQQQQQQ 215

Query: 118 FHRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQ 151
            H    +     Q QQQ Q  QQQ+   + Q  Q
Sbjct: 216 QHHQQQQHHQHSQPQQQHQHNQQQQHQHNQQQHQ 249


>SSN6_YEAST (P14922) Glucose repression mediator protein
          Length = 966

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 33/125 (26%), Positives = 50/125 (39%), Gaps = 5/125 (4%)

Query: 37  SLVKQLRTNDQGCVVNSDASSHGQN----LTKHGKIGKACQSQQSTQQPQQHKKQVRRRL 92
           S+V+Q     Q   +NS A+ +       L    +     Q+Q   Q   Q + Q + + 
Sbjct: 464 SMVQQQHPAQQ-TPINSSATMYSNGASPQLQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 522

Query: 93  HTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQN 152
                 Q +    A A+ +     K    +  +A +QQQQQQ QQQQQQ+     Q  Q 
Sbjct: 523 QAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQAQAQQQQQQQQQQQQQQQQQQQQQQQQQQ 582

Query: 153 PSFDQ 157
               Q
Sbjct: 583 QQQQQ 587



 Score = 39.3 bits (90), Expect = 0.017
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 73  QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
           Q+Q   Q   Q + Q + + H     Q +    A+A+ +        +   ++  +QQQQ
Sbjct: 517 QAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQAQAQ-----QQQQQQQQQQQQQQ 571

Query: 133 QQLQQQQQQRAPDSPQLSQNP--SFDQDGRYKSRRNPR 168
           QQ QQQQQQ+     QL   P     Q G      NP+
Sbjct: 572 QQQQQQQQQQQQQQQQLQPLPRQQLQQKGVSVQMLNPQ 609



 Score = 34.7 bits (78), Expect = 0.42
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 123 MKEASEQQQQQQLQQQQQQRAPDSPQLSQNP 153
           M++ ++QQQQQQ QQQQQQ+    PQ   +P
Sbjct: 10  MEQPAQQQQQQQQQQQQQQQQAAVPQQPLDP 40



 Score = 34.3 bits (77), Expect = 0.54
 Identities = 34/152 (22%), Positives = 58/152 (37%), Gaps = 22/152 (14%)

Query: 42  LRTNDQGCVVNSDASSHGQNLT------KHG-------------KIGKACQSQQSTQQPQ 82
           L+ NDQG  +N+  S+   N T      +H                G + Q Q   Q   
Sbjct: 441 LQPNDQGNPLNTRISAQSANATASMVQQQHPAQQTPINSSATMYSNGASPQLQAQAQAQA 500

Query: 83  QHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEA---SEQQQQQQLQQQQ 139
           Q + Q + +       Q +    A+A+ +     + H  +  +A   ++ Q Q Q QQQQ
Sbjct: 501 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQAQAQQQQ 560

Query: 140 QQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYP 171
           QQ+     Q  Q     Q  + + ++  +  P
Sbjct: 561 QQQQQQQQQQQQQQQQQQQQQQQQQQQLQPLP 592


>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia
            protein 2 (ALL1-related protein)
          Length = 5262

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 22/70 (31%), Positives = 40/70 (56%)

Query: 73   QSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKEASEQQQQ 132
            Q QQ  QQ QQ ++Q +++L   +  Q++ L   + ++++    +      ++  +QQQQ
Sbjct: 3626 QQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQ 3685

Query: 133  QQLQQQQQQR 142
            QQ QQ QQQ+
Sbjct: 3686 QQQQQFQQQQ 3695



 Score = 37.4 bits (85), Expect = 0.064
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 66   GKIGKACQSQQSTQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRASMKE 125
            G +G    + Q  QQ QQH++Q          + ++ L     + ++          +++
Sbjct: 3571 GLMGHRLVTAQQQQQQQQHQQQGSM---AGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQ 3627

Query: 126  ASEQQQQQQLQQQQQQRAPDSPQLSQ 151
              + QQQQQLQQQQQQ+     QL Q
Sbjct: 3628 QQQLQQQQQLQQQQQQQLQQQQQLQQ 3653



 Score = 32.7 bits (73), Expect = 1.6
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 65   HGKIGKACQSQQSTQQ------PQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKF 118
            H K  KA  ++Q T +      P+   ++++         Q++L  + + ++E    +  
Sbjct: 3260 HRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLM-- 3317

Query: 119  HRASMKEASEQQQQQQLQQQQQQRAPDSPQLSQNP 153
              A  +   +QQQQQQ QQQQQ  A  +   SQ+P
Sbjct: 3318 --AEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSP 3350


>MIG1_CANAL (Q9Y7G2) Regulatory protein MIG1
          Length = 574

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 67/277 (24%), Positives = 102/277 (36%), Gaps = 58/277 (20%)

Query: 29  PFSGAYMRSLVKQLRTNDQGCVVNSDASSHGQNLTKHGKIGKACQSQQSTQQPQQHKKQV 88
           P +  YM+ +V+   T     V N+D   H Q    H +     Q Q   Q+  QH++Q 
Sbjct: 156 PHANGYMQPMVQ---TQGVTVVPNTDQQQHQQQQQYHQQ-----QQQYQFQERPQHQQQQ 207

Query: 89  RRRLHTSRPYQER---------LLNMAEARR------EIVTALKFHRASMKEASEQQQQQ 133
           +  + T+   Q+             MA A+           ++K    S+     + QQQ
Sbjct: 208 QTNIGTNNHLQQNGSAVFSLPSSPTMASAQTPNSGTSSSSESIKLAPLSIPNNISRPQQQ 267

Query: 134 QLQQQQQQRAPDSPQLSQNPSFDQDGRYKSRRNPRIYPSCNTNFSSYMGDFSSYPPAFVP 193
           Q QQQQQQ+ P                 KS  +  +Y   N  FS              P
Sbjct: 268 QQQQQQQQQIP-----------------KSESSTSLYSDGNKLFSR-------------P 297

Query: 194 NSYPVPVASPIAPPPLMAENPNFILPNQPLGLNLN--FHDFNNLDATIHLSNTSLSSNSF 251
           NS    + S  +P    A  P   +P  P   NLN  F   +N + +   + +S S +S 
Sbjct: 298 NSTLHSLGS--SPENNNASGPLSGVPT-PSFSNLNDYFQQKSNSNNSRLFNASSSSLSSL 354

Query: 252 SSATSSSQEVPSVELSQGDGISSLVNSTESNAASQVN 288
           S    SS       L +   ++S  N+T +   S  N
Sbjct: 355 SGKIRSSSSTNLAGLQRLTPLTSTTNNTNNTTTSNTN 391


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.312    0.126    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,747,391
Number of Sequences: 164201
Number of extensions: 1836357
Number of successful extensions: 18188
Number of sequences better than 10.0: 421
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 9236
Number of HSP's gapped (non-prelim): 2824
length of query: 382
length of database: 59,974,054
effective HSP length: 112
effective length of query: 270
effective length of database: 41,583,542
effective search space: 11227556340
effective search space used: 11227556340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)