BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0100a.10
(700 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NUCL_HUMAN (P19338) Nucleolin (Protein C23) 73 2e-12
NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2 (Up-f... 71 1e-11
VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 backgrou... 70 1e-11
NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3 70 2e-11
CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform precu... 70 2e-11
SPT8_YEAST (P38915) Transcription factor SPT8 68 7e-11
GARP_PLAFF (P13816) Glutamic acid-rich protein precursor 68 9e-11
MP62_LYTPI (P91753) Mitotic apparatus protein p62 67 1e-10
NUCL_RAT (P13383) Nucleolin (Protein C23) 66 3e-10
TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein) ... 66 4e-10
ASF1_YEAST (P32447) Anti-silencing protein 1 65 5e-10
UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream b... 65 6e-10
NUCL_MOUSE (P09405) Nucleolin (Protein C23) 64 1e-09
IFH1_YEAST (P39520) IFH1 protein (RRP3 protein) 64 1e-09
CAQ1_CHICK (P19204) Calsequestrin, skeletal muscle isoform precu... 64 1e-09
YHT1_YEAST (P38835) Hypothetical 95.1 kDa protein in ACT5-YCK1 i... 63 2e-09
SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (... 63 2e-09
UBF1_XENLA (P25979) Nucleolar transcription factor 1 (Upstream b... 62 4e-09
SEC7_YEAST (P11075) Protein transport protein SEC7 62 4e-09
CAQ2_RAT (P51868) Calsequestrin, cardiac muscle isoform precurso... 62 4e-09
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)
Length = 706
Score = 73.2 bits (178), Expect = 2e-12
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 270 DAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKVKI 329
D E +E ++ ++ED + DD +D D + + + P K
Sbjct: 161 DEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKA 220
Query: 330 FKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDS 389
KV+ P K + + ++ED+E++DEDED+D+DEDD+DD+DED++E+E+EE++
Sbjct: 221 AKVV-PVKA---------KNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEE 270
Query: 390 DTGSLELVDMKSETDQEADDEVEINTGLGT 419
K Q+A E + GT
Sbjct: 271 PVKEAPGKRKKEMAKQKAAPEAKKQKVEGT 300
Score = 58.2 bits (139), Expect = 7e-08
Identities = 31/76 (40%), Positives = 42/76 (54%), Gaps = 23/76 (30%)
Query: 353 EEDDEDEDEDEDEDEDEDDDDDEDEDED----------------EDEDEEKDSDTGSLEL 396
+++D DE+ED+D +EDE+DD+DEDEDED EDED+E D D
Sbjct: 140 KKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED------ 193
Query: 397 VDMKSETDQEADDEVE 412
D + D+E D E E
Sbjct: 194 -DEDDDDDEEDDSEEE 208
Score = 55.5 bits (132), Expect = 5e-07
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 27/99 (27%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDED------------------------EDEDE---DED 384
++EDDED+++DED+D+DE+DD +E+ EDEDE DED
Sbjct: 184 EDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDED 243
Query: 385 EEKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDRE 423
E+ D D + D E ++E ++E + G +E
Sbjct: 244 EDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKE 282
Score = 55.1 bits (131), Expect = 6e-07
Identities = 35/111 (31%), Positives = 58/111 (51%), Gaps = 11/111 (9%)
Query: 317 GLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDED 376
G K PG + V TP K + +K + + ++ + ED DE+ED+D ++D+++D
Sbjct: 107 GKKGATPGKAL----VATPGKKGAAIPAKGAK---NGKNAKKEDSDEEEDDDSEEDEEDD 159
Query: 377 EDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNE 427
EDEDEDEDE + + + + D E D++ E + D ED +E
Sbjct: 160 EDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDD----DDDEEDDSE 206
Score = 54.7 bits (130), Expect = 8e-07
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 352 DEEDDEDEDEDEDE------------------------DEDEDDDDDEDEDEDEDEDEEK 387
DEEDDEDEDEDEDE D+++DDDD+ED+ E+E +
Sbjct: 155 DEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTP 214
Query: 388 DSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNE 427
+ ++V +K++ E +DE E + D ED +
Sbjct: 215 AKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDED 254
Score = 53.9 bits (128), Expect = 1e-06
Identities = 52/181 (28%), Positives = 78/181 (42%), Gaps = 54/181 (29%)
Query: 241 KKGEFKSQAVYLK--RKGAFHGPPTTSSKALDAAERLSSVESTEDRSELFVVSTEDPESG 298
KKG +A+ +KGA P +K A++ S E +D SE ED E
Sbjct: 108 KKGATPGKALVATPGKKGA--AIPAKGAKNGKNAKKEDSDEEEDDDSE---EDEEDDEDE 162
Query: 299 DDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDD-- 356
D+ D +PA +K + ++ D+D + E D+E+D
Sbjct: 163 DEDEDEIEPA---------------AMKAAAAAPASEDEDDED--DEDDEDDDDDEEDDS 205
Query: 357 ---------------------------EDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDS 389
EDEDE+ED DEDEDDDDDED+++D+DED+E++
Sbjct: 206 EEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEED-DEDEDDDDDEDDEDDDDEDDEEEE 264
Query: 390 D 390
+
Sbjct: 265 E 265
>NMD2_YEAST (P38798) Nonsense-mediated mRNA decay protein 2
(Up-frameshift suppressor 2)
Length = 1089
Score = 70.9 bits (172), Expect = 1e-11
Identities = 59/214 (27%), Positives = 101/214 (46%), Gaps = 40/214 (18%)
Query: 239 MDKKGEFKSQAVYLKRKGAFHGPPTTSSKAL-DAAERLSS-------VESTEDRSELFVV 290
+ K+ EF+ + + K + F S+ L ++A RL S ++S +DR +
Sbjct: 767 LPKETEFRVSSTFKKYENIFGNTKFERSENLVESASRLESLLKSLNAIKSKDDRVKGSSA 826
Query: 291 S--------------TEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPE 336
S TED E DD ND D + + ++ ++ TP
Sbjct: 827 SIHNGKESAVPIESITEDDEDEDDEND--DGVDLLGEDEDA-------------EISTPN 871
Query: 337 KVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDE--DEDEDEDEDEEKDSDTGSL 394
+ + ++EDDED+DED+D+D+D+DDDD E DED+DED+D+E D D
Sbjct: 872 TESAPGKHQAKQDESEDEDDEDDDEDDDDDDDDDDDDGEEGDEDDDEDDDDEDDDDEEEE 931
Query: 395 EL-VDMKSETDQEADDEVEINTGLGTSDREDQNE 427
+ D++ D +AD ++E+ +R+ ++E
Sbjct: 932 DSDSDLEYGGDLDADRDIEMKRMYEEYERKLKDE 965
Score = 42.0 bits (97), Expect = 0.006
Identities = 20/61 (32%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEV 411
+++DDED+D++E+ED D D + D D D D + ++ + +L K E +++A++E+
Sbjct: 918 EDDDDEDDDDEEEEDSDSDLEYGGDLDADRDIEMKRMYEEYERKL---KDEEERKAEEEL 974
Query: 412 E 412
E
Sbjct: 975 E 975
>VHS3_YEAST (Q08438) Protein VHS3 (Viable in a HAL3 SIT4 background
protein 3)
Length = 674
Score = 70.5 bits (171), Expect = 1e-11
Identities = 25/59 (42%), Positives = 46/59 (77%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDE 410
++ DD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D + D + + D++ DDE
Sbjct: 603 EDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDE 661
Score = 68.2 bits (165), Expect = 7e-11
Identities = 25/60 (41%), Positives = 46/60 (76%)
Query: 353 EEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVE 412
+ED++D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D + D E D++ D++ E
Sbjct: 602 DEDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDE 661
Score = 67.8 bits (164), Expect = 9e-11
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 352 DEEDD----------EDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKS 401
DEEDD ED D+D+D+D+D+DDDDD+D+D+D+D+D++ D D + D
Sbjct: 588 DEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 647
Query: 402 ETDQEADDEVEINTGLGTSDR 422
+ D++ +DE E + G D+
Sbjct: 648 DDDEDDEDEDEDDEGKKKEDK 668
Score = 67.4 bits (163), Expect = 1e-10
Identities = 24/44 (54%), Positives = 39/44 (88%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLE 395
D++DD+D+D+D+D+D+D+DDDD++DEDEDED++ +K D G L+
Sbjct: 629 DDDDDDDDDDDDDDDDDDDDDDEDDEDEDEDDEGKKKEDKGGLQ 672
Score = 63.5 bits (153), Expect = 2e-09
Identities = 31/84 (36%), Positives = 50/84 (58%), Gaps = 13/84 (15%)
Query: 352 DEEDDEDEDEDED--------EDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSET 403
+EE+DED DE++D +DED DDDDD+D+D+D+D+D++ D D D +
Sbjct: 580 EEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDD-----DDDDDD 634
Query: 404 DQEADDEVEINTGLGTSDREDQNE 427
D + DD+ + + D ED++E
Sbjct: 635 DDDDDDDDDDDDDDDDEDDEDEDE 658
Score = 61.6 bits (148), Expect = 7e-09
Identities = 30/93 (32%), Positives = 54/93 (57%), Gaps = 8/93 (8%)
Query: 353 EEDDEDEDEDEDED--------EDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETD 404
+E++EDED DE++D +DED+DDD+D+D+D+D+D++ D D + D + D
Sbjct: 579 KEEEEDEDNDEEDDNKKNDTGGKDEDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 638
Query: 405 QEADDEVEINTGLGTSDREDQNEIAVKVVIGGI 437
+ DD+ + + D ++ +E K GG+
Sbjct: 639 DDDDDDDDDDDDEDDEDEDEDDEGKKKEDKGGL 671
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3
Length = 802
Score = 69.7 bits (169), Expect = 2e-11
Identities = 31/89 (34%), Positives = 60/89 (66%), Gaps = 8/89 (8%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKD--------SDTGSLELVDMKSET 403
D++DD++E+E+E+E++D+DDDDD+D+DE+E+E+EE++ SD+ + + D + +
Sbjct: 101 DDDDDDNEEEEEEEEDDDDDDDDDDDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEEDKK 160
Query: 404 DQEADDEVEINTGLGTSDREDQNEIAVKV 432
D+ D EVE+ +++D +E K+
Sbjct: 161 DKTKDKEVELRRETLEKEQKDVDEAIKKI 189
Score = 46.6 bits (109), Expect = 2e-04
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDD--EDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADD 409
D++DD+DE+E+E+E+E+ +D+ D ++ EDEE D + V+++ ET ++
Sbjct: 121 DDDDDDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEEDKKDKTKDKEVELRRETLEKEQK 180
Query: 410 EVEINTGLGTSDREDQNEIAVKV--VIGGIVQKLSSNISTRDLLRVP 454
+V+ T + D + V ++QK I ++L +P
Sbjct: 181 DVDEAIKKITREENDNTHFPTNMENVNYDLLQKQVKYIMDSNMLNLP 227
Score = 40.8 bits (94), Expect = 0.012
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 347 IEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQE 406
IE EE+ E E E+E+E++ E +D +++E+ED++E E++ E+++ + E ++E
Sbjct: 39 IEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENG-----EVINTEEEEEEE 93
Query: 407 ADDEVEINTGLGTSDREDQNE 427
+ G D +D NE
Sbjct: 94 HQQKG------GNDDDDDDNE 108
Score = 35.0 bits (79), Expect = 0.67
Identities = 20/84 (23%), Positives = 43/84 (50%), Gaps = 3/84 (3%)
Query: 347 IEQIIDEEDDEDEDEDEDE---DEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSET 403
++ I E D + +E+E + DD + D E+E E E ++ + EL D+ E
Sbjct: 10 VQDIPSPELSVDSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEE 69
Query: 404 DQEADDEVEINTGLGTSDREDQNE 427
+++ +++ E N + ++ E++ E
Sbjct: 70 EEDKEEKGEENGEVINTEEEEEEE 93
>CAQ1_RANES (P31231) Calsequestrin, skeletal muscle isoform
precursor
Length = 420
Score = 69.7 bits (169), Expect = 2e-11
Identities = 25/51 (49%), Positives = 43/51 (84%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+D I V+E ++ EDD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 362 EDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 412
Score = 65.9 bits (159), Expect = 4e-10
Identities = 22/51 (43%), Positives = 42/51 (82%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+D++ + D++DD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 366 EDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 416
Score = 65.1 bits (157), Expect = 6e-10
Identities = 21/39 (53%), Positives = 37/39 (94%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
D++DD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 382 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 420
Score = 65.1 bits (157), Expect = 6e-10
Identities = 21/39 (53%), Positives = 37/39 (94%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
D++DD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 380 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 418
Score = 65.1 bits (157), Expect = 6e-10
Identities = 21/39 (53%), Positives = 37/39 (94%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
D++DD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 381 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 419
Score = 62.0 bits (149), Expect = 5e-09
Identities = 25/69 (36%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Query: 341 DLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMK 400
D + IE +++ E + ++D+D+D+D+D+DDDDD+D+D+D+D+D++ D D D
Sbjct: 359 DELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD-------DDD 411
Query: 401 SETDQEADD 409
+ D + DD
Sbjct: 412 DDDDDDDDD 420
Score = 57.0 bits (136), Expect = 2e-07
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 336 EKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLE 395
++ D + ++ + I D + E ED+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 351 DEEDLPTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDD----- 405
Query: 396 LVDMKSETDQEADDE 410
D + D + DD+
Sbjct: 406 --DDDDDDDDDDDDD 418
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 327 VKIFKVITPEKVDKDLISKVIEQIIDEEDDEDED--EDEDEDEDEDDDDDEDEDEDEDED 384
+ + V + V D+ + +DE +D ED E E ED+DDDDD+D+D+D+D+D
Sbjct: 334 IGVVNVTDADSVWMDMDDEEDLPTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDD 393
Query: 385 EEKDSDTGSLELVDMKSETDQEADDE 410
++ D D + D + D + DD+
Sbjct: 394 DDDDDDDDDDDDDDDDDDDDDDDDDD 419
Score = 34.7 bits (78), Expect = 0.88
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 355 DDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEIN 414
DDE++ DE ED +D E E ED+D++ D D + D + D + DD+ + +
Sbjct: 350 DDEEDLPTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 409
Query: 415 TGLGTSDRED 424
D +D
Sbjct: 410 DDDDDDDDDD 419
Score = 32.3 bits (72), Expect = 4.4
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 355 DDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEIN 414
D +DE++ DE ED +D E E ED++ D D + D + D + DD+ + +
Sbjct: 348 DMDDEEDLPTVDELEDWIEDVLEGEVNTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 407
Query: 415 TGLGTSDREDQNE 427
D +D ++
Sbjct: 408 DDDDDDDDDDDDD 420
>SPT8_YEAST (P38915) Transcription factor SPT8
Length = 602
Score = 68.2 bits (165), Expect = 7e-11
Identities = 34/105 (32%), Positives = 60/105 (56%), Gaps = 4/105 (3%)
Query: 331 KVITPEKVDKDLISKV---IEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEK 387
+V+ E+ D++++S + +Q ++ DD EDE++D+D+DEDDDDDEDE ED+DE E+
Sbjct: 12 QVVDDEEDDEEMLSGLENDSKQDLEGNDDGGEDEEDDDDDDEDDDDDEDEREDDDEQEDD 71
Query: 388 DSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNEIAVKV 432
D + + + + T++ DE + G D + K+
Sbjct: 72 DGEDDAARMDKTATPTNEHQHDEQKA-AAAGAGGAGDSGDAVTKI 115
Score = 59.7 bits (143), Expect = 3e-08
Identities = 36/115 (31%), Positives = 60/115 (51%), Gaps = 26/115 (22%)
Query: 336 EKVDKDLISKVIEQIIDEEDDEDE-------------DEDEDEDEDEDDDDDEDEDEDED 382
++VD LI+ Q++D+E+D++E + ++D EDE+DDDD+DED+D+D
Sbjct: 2 DEVDDILINN---QVVDDEEDDEEMLSGLENDSKQDLEGNDDGGEDEEDDDDDDEDDDDD 58
Query: 383 EDEEKDSDTGSLELVDMKSETDQEADDEVEIN-TGLGTSDREDQNEIAVKVVIGG 436
EDE +D D + E D DD ++ T T++ + + A GG
Sbjct: 59 EDEREDDD---------EQEDDDGEDDAARMDKTATPTNEHQHDEQKAAAAGAGG 104
>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor
Length = 678
Score = 67.8 bits (164), Expect = 9e-11
Identities = 30/80 (37%), Positives = 56/80 (69%), Gaps = 1/80 (1%)
Query: 348 EQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEA 407
E+ +EE++E+E+E+E+E+E+E+++++EDEDE++++D E+D D + D + + D+E
Sbjct: 578 EEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEED 637
Query: 408 DDEVEINTGLGTSDREDQNE 427
DDE E + D ED+ E
Sbjct: 638 DDE-EDDDEDEDEDEEDEEE 656
Score = 67.8 bits (164), Expect = 9e-11
Identities = 29/86 (33%), Positives = 57/86 (65%)
Query: 348 EQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEA 407
E+ +EE++E+E+E+E+E+E+E+D+D+EDED+ E+++++ + D E D + + D+E
Sbjct: 583 EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEED 642
Query: 408 DDEVEINTGLGTSDREDQNEIAVKVV 433
DDE E + E++ E + K +
Sbjct: 643 DDEDEDEDEEDEEEEEEEEEESEKKI 668
Score = 63.2 bits (152), Expect = 2e-09
Identities = 25/84 (29%), Positives = 57/84 (67%)
Query: 344 SKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSET 403
SK +++ +E ++++E+E+E+E+E+E+++++E+E+E+E+E+EE+D D + + +
Sbjct: 562 SKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDD 621
Query: 404 DQEADDEVEINTGLGTSDREDQNE 427
+E +D+ E + D ED +E
Sbjct: 622 AEEDEDDAEEDDDEEDDDEEDDDE 645
Score = 62.4 bits (150), Expect = 4e-09
Identities = 29/70 (41%), Positives = 47/70 (66%), Gaps = 1/70 (1%)
Query: 348 EQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEA 407
E+ DEED++D +EDED D +ED+DD E++D++ED+DEE D + + D + E ++E
Sbjct: 604 EEDEDEEDEDDAEEDED-DAEEDEDDAEEDDDEEDDDEEDDDEDEDEDEEDEEEEEEEEE 662
Query: 408 DDEVEINTGL 417
+ E +I L
Sbjct: 663 ESEKKIKRNL 672
Score = 57.8 bits (138), Expect = 1e-07
Identities = 25/97 (25%), Positives = 61/97 (62%)
Query: 331 KVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
K + E+ K+ +V E+ + ++DE+E E+++E+E+E+++++E+E+E+E+E+EE++ +
Sbjct: 543 KHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 602
Query: 391 TGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNE 427
E + + + +++ DD E D E+ ++
Sbjct: 603 EEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDD 639
Score = 57.4 bits (137), Expect = 1e-07
Identities = 27/102 (26%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 326 KVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDE 385
K++ ++ + VDK+ K + + EE E ++++E+ +EDE+++++E+E+E+E+E+E
Sbjct: 533 KIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 592
Query: 386 EKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNE 427
E++ + E + + + D+E +D+ E + D +D E
Sbjct: 593 EEEEEE---EEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEE 631
Score = 49.3 bits (116), Expect = 3e-05
Identities = 27/104 (25%), Positives = 58/104 (54%), Gaps = 2/104 (1%)
Query: 326 KVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDE 385
K K+ K+ E + + K E+ EE E ++E ++ EDE++ ++++E+E+E+E+E
Sbjct: 528 KKKMAKIEEAELQKQKHVDK--EEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEE 585
Query: 386 EKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNEIA 429
E++ + E + + E +++ D+E E + D E+ + A
Sbjct: 586 EEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDA 629
Score = 38.5 bits (88), Expect = 0.061
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDE---EKDSDTGSLEL 396
+D K + +I + E + + D++ED+ E+ + ++E ++ EDE E+D + E
Sbjct: 524 RDNHKKKMAKIEEAELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEE 583
Query: 397 VDMKSETDQEADDEVEINTGLGTSDREDQNE 427
+ + E ++E ++E E D ED+++
Sbjct: 584 EEEEEEEEEEEEEEEEEEEEEEDEDEEDEDD 614
Score = 31.2 bits (69), Expect = 9.7
Identities = 21/76 (27%), Positives = 36/76 (46%)
Query: 226 SAAGVPLFEFFLKMDKKGEFKSQAVYLKRKGAFHGPPTTSSKALDAAERLSSVESTEDRS 285
S G L E L+ +K KS+ + + K PTTS+ L A + + S+ D +
Sbjct: 44 SITGRLLNETELEKNKDDNSKSETLLKEEKDEKDDVPTTSNDNLKNAHNNNEISSSTDPT 103
Query: 286 ELFVVSTEDPESGDDR 301
+ V+ +D E+ D+
Sbjct: 104 NIINVNDKDNENSVDK 119
>MP62_LYTPI (P91753) Mitotic apparatus protein p62
Length = 411
Score = 67.4 bits (163), Expect = 1e-10
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 16/143 (11%)
Query: 296 ESGDDRNDGSDPAERMPGFQN--GLKDMIPGVKVKIFKVITPEKVDKDLISK------VI 347
E +D +D + E Q G K P K K+ KVDKD SK +
Sbjct: 183 ELDEDEDDDEEEEEEEEEIQTAKGKKRPAPSAKGPAKKLA---KVDKDGTSKRKVPNGSV 239
Query: 348 EQIIDEEDDEDEDEDEDE---DEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETD 404
E +DDED++EDED DE+E+++ E+E+EDE+EE++ D + L D E D
Sbjct: 240 ENGHAIDDDEDDEEDEDYKVGDEEEEEEATSGEEEEEDEEEEEEEDDEEMALGDDDDEDD 299
Query: 405 QEADDEVEINTGLGTSDREDQNE 427
E DDE E G+ D E++ +
Sbjct: 300 DEEDDEDE--EGMDDEDEEEEED 320
Score = 56.2 bits (134), Expect = 3e-07
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 5/53 (9%)
Query: 348 EQIIDEEDDEDEDEDE-----DEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLE 395
E+ DEE++E+ED++E D+DED+D++DDEDE+ +DEDEE++ D+ ++
Sbjct: 273 EEEEDEEEEEEEDDEEMALGDDDDEDDDEEDDEDEEGMDDEDEEEEEDSSPVK 325
Score = 42.4 bits (98), Expect = 0.004
Identities = 38/148 (25%), Positives = 55/148 (36%), Gaps = 57/148 (38%)
Query: 334 TPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDD---------------------- 371
TP+K I K I + + ++ DEDED+DE++
Sbjct: 157 TPKKGSPKRIVKKIAAVKGRMKGKGDELDEDEDDDEEEEEEEEEIQTAKGKKRPAPSAKG 216
Query: 372 -----------------------------DDDEDEDEDED---EDEEKDSDTGSLELVDM 399
DDDED++EDED DEE++ + S E +
Sbjct: 217 PAKKLAKVDKDGTSKRKVPNGSVENGHAIDDDEDDEEDEDYKVGDEEEEEEATSGEEEEE 276
Query: 400 KSETDQEADDEVEINTGLGTSDREDQNE 427
E ++E DDE LG D ED +E
Sbjct: 277 DEEEEEEEDDE---EMALGDDDDEDDDE 301
Score = 41.6 bits (96), Expect = 0.007
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 291 STEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQI 350
S E+ + DD D + + G + ++ G + + + E+ D+++ +
Sbjct: 238 SVENGHAIDDDEDDEEDEDYKVGDEEEEEEATSGEEEEEDEEEEEEEDDEEM---ALGDD 294
Query: 351 IDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGS 393
DE+DDE++DEDE+ +DED++++ED + + K G+
Sbjct: 295 DDEDDDEEDDEDEEGMDDEDEEEEEDSSPVKPAKKAKGKVNGT 337
Score = 38.9 bits (89), Expect = 0.047
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 25/63 (39%)
Query: 351 IDEEDDEDEDE-DEDEDEDE------------------------DDDDDEDEDEDEDEDE 385
+ +ED EDEDE +EDE+E+E D+ DEDED+DE+E+E
Sbjct: 137 VGDEDLEDEDEGEEDEEEEETPKKGSPKRIVKKIAAVKGRMKGKGDELDEDEDDDEEEEE 196
Query: 386 EKD 388
E++
Sbjct: 197 EEE 199
Score = 35.4 bits (80), Expect = 0.52
Identities = 25/96 (26%), Positives = 48/96 (49%), Gaps = 23/96 (23%)
Query: 348 EQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDT---GSLELVDMK---- 400
+ +D ++DE+ +D + E + D++ EDEDE E++E++ +T GS + + K
Sbjct: 114 QHALDLQEDEEFGKDFEGAEAYEVGDEDLEDEDEGEEDEEEEETPKKGSPKRIVKKIAAV 173
Query: 401 --------SETDQEADDEVEINTGLGTSDREDQNEI 428
E D++ DD+ E + E++ EI
Sbjct: 174 KGRMKGKGDELDEDEDDDEE--------EEEEEEEI 201
>NUCL_RAT (P13383) Nucleolin (Protein C23)
Length = 712
Score = 66.2 bits (160), Expect = 3e-10
Identities = 54/185 (29%), Positives = 87/185 (46%), Gaps = 21/185 (11%)
Query: 261 PPTTSSKALDAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKD 320
PP K + A+ + ++ED E ED + DD +D + E + + +
Sbjct: 168 PPVV--KGVKPAKAAPAAPASEDEDE------EDDDDEDDDDDDEEEEEEDDS-EEEVME 218
Query: 321 MIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDED 380
+ P K TP KV V E+ D+EDDEDE+EDEDE EDE+DD+DEDE+E+
Sbjct: 219 ITPAKGKK-----TPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDE-EDEEDDEDEDEEEE 272
Query: 381 ED-----EDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNEIAVKVVIG 435
E+ + K T E + K + + ++ N +G + +++ +KV I
Sbjct: 273 EEPVKAAPGKRKKEMTKQKEAPEAKKQKIEGSEPTTPFNLFIGNLN-PNKSVAELKVAIS 331
Query: 436 GIVQK 440
+ K
Sbjct: 332 ELFAK 336
Score = 58.5 bits (140), Expect = 6e-08
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 48/143 (33%)
Query: 333 ITPEKVDKDLISKVIEQIIDEEDDEDEDE-DEDEDE------------------------ 367
+TP K K+ + E ++ED+EDED+ DEDEDE
Sbjct: 127 VTPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDEDEEDEFEPPVVKGVKPAKAAPAAPAS 186
Query: 368 ----DEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMK-------------------SETD 404
+EDDDD++D+D+DE+E+EE DS+ +E+ K E D
Sbjct: 187 EDEDEEDDDDEDDDDDDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDD 246
Query: 405 QEADDEVEINTGLGTSDREDQNE 427
++ +DE E D ED++E
Sbjct: 247 EDDEDEEEDEDEEDEEDDEDEDE 269
Score = 51.2 bits (121), Expect = 9e-06
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 361 EDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTG-----SLELVDMKSETDQEADDEVEINT 415
ED DEDEDE+D+DD DEDEDE+++ E G + + D+E DD+ + +
Sbjct: 142 EDSDEDEDEEDEDDSDEDEDEEDEFEPPVVKGVKPAKAAPAAPASEDEDEEDDDDEDDDD 201
Query: 416 GLGTSDREDQNEIAVKVVIGGIVQKLSSNISTRDLLRVPAKLEIKKRGSFSFTVEKEVNQ 475
+ ED +E V + +K + + V + E + E E ++
Sbjct: 202 DDEEEEEEDDSEEEVMEITPAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDE 261
Query: 476 QDGQAKGKSSSDKSTK 491
+D + + + ++ K
Sbjct: 262 EDDEDEDEEEEEEPVK 277
>TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein)
(Intended thorax protein)
Length = 396
Score = 65.9 bits (159), Expect = 4e-10
Identities = 36/128 (28%), Positives = 75/128 (58%), Gaps = 10/128 (7%)
Query: 273 ERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKV--KIF 330
ER S +D+ +LF ++ + ++ E+ G Q G + K
Sbjct: 268 ERRVDTRSYDDKKKLFEGGWDEISKDSNEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAG 327
Query: 331 KVITPE-----KVDKDLIS---KVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDED 382
+ TPE K D+D++ +V E++++EED+EDE+++E+E+E+E+++++E+E+E+E+
Sbjct: 328 EPETPEGEEDAKADEDIVEDDEEVEEEVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEE 387
Query: 383 EDEEKDSD 390
E+EE++ +
Sbjct: 388 EEEEEEEE 395
Score = 34.3 bits (77), Expect = 1.1
Identities = 22/75 (29%), Positives = 36/75 (47%), Gaps = 8/75 (10%)
Query: 353 EEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVE 412
E + E E + +ED DED ED++E EE E+V+ + E D+E ++E E
Sbjct: 320 ERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEE--------EVVEEEDEEDEEDEEEEE 371
Query: 413 INTGLGTSDREDQNE 427
+ E++ E
Sbjct: 372 EEEEEEEEEEEEEEE 386
Score = 33.5 bits (75), Expect = 2.0
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 359 EDEDEDEDEDEDDDDDEDEDED-------EDEDEEKDSDTGSLELVDMKSETDQEADDEV 411
E E + +ED D+D ED++ E+EDEE + D E + + E ++E ++E
Sbjct: 328 EPETPEGEEDAKADEDIVEDDEEVEEEVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEE 387
Query: 412 E 412
E
Sbjct: 388 E 388
>ASF1_YEAST (P32447) Anti-silencing protein 1
Length = 279
Score = 65.5 bits (158), Expect = 5e-10
Identities = 34/119 (28%), Positives = 68/119 (56%), Gaps = 8/119 (6%)
Query: 326 KVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDE------ 379
+V F ++ + + DL + DEE+++DE+ED+DED+++D+DDD+++ E
Sbjct: 145 RVTRFNIVWDNENEGDLYPPEQPGVDDEEEEDDEEEDDDEDDEDDEDDDQEDGEGEAEEA 204
Query: 380 -DEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDR-EDQNEIAVKVVIGG 436
+E+E+EE+ ++ L + + + + DE E +G+ D+ ED N+ + + GG
Sbjct: 205 AEEEEEEEEKTEDNETNLEEEEEDIENSDGDEEEGEEEVGSVDKNEDGNDKKRRKIEGG 263
Score = 51.6 bits (122), Expect = 7e-06
Identities = 30/133 (22%), Positives = 64/133 (47%), Gaps = 8/133 (6%)
Query: 323 PGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDED-------EDEDEDEDEDEDDDDDE 375
P KV++ ++ +K +++ + D E++ D +DE+E++DE++DDDE
Sbjct: 126 PPAKVQVDHIVRNILAEKPRVTR-FNIVWDNENEGDLYPPEQPGVDDEEEEDDEEEDDDE 184
Query: 376 DEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLGTSDREDQNEIAVKVVIG 435
D+++DED+D+E + + E ++ D+E + + D +E + +G
Sbjct: 185 DDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDIENSDGDEEEGEEEVG 244
Query: 436 GIVQKLSSNISTR 448
+ + N R
Sbjct: 245 SVDKNEDGNDKKR 257
Score = 40.4 bits (93), Expect = 0.016
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 352 DEEDDEDED------------EDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDM 399
D+EDDED+D E+E+E+E++ +D++ + +E+E++ E D D E
Sbjct: 185 DDEDDEDDDQEDGEGEAEEAAEEEEEEEEKTEDNETNLEEEEEDIENSDGDEEEGEEEVG 244
Query: 400 KSETDQEADDEVEINTGLGTSDREDQNEIAVK 431
+ +++ +D+ G++D E + A +
Sbjct: 245 SVDKNEDGNDKKRRKIEGGSTDIESTPKDAAR 276
Score = 37.4 bits (85), Expect = 0.14
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 279 ESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPEKV 338
E ED E ++ + DD+ DG AE E+
Sbjct: 172 EEEEDDEEEDDDEDDEDDEDDDQEDGEGEAEEA----------------------AEEEE 209
Query: 339 DKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLEL 396
+++ ++ E ++EE+++ E+ D DE+E E++ D++ED ++ + + + GS ++
Sbjct: 210 EEEEKTEDNETNLEEEEEDIENSDGDEEEGEEEVGSVDKNEDGNDKKRRKIEGGSTDI 267
>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream
binding factor 1) (UBF-1) (Autoantigen NOR-90)
Length = 764
Score = 65.1 bits (157), Expect = 6e-10
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 335 PEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSL 394
P+ L SK + DEED++DEDEDE+E++DE+ D ED + + E +S+ G
Sbjct: 664 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 723
Query: 395 ELVDMKSETDQEADDEVEINTGLGTS 420
D + E D E DDE E N G+S
Sbjct: 724 NEEDDEDEDDDEDDDEDEDNESEGSS 749
Score = 58.5 bits (140), Expect = 6e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEAD 408
D + EDE ED DE+E+DD+DED+DED+DEDE+ +S+ S +D +++
Sbjct: 708 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 58.2 bits (139), Expect = 7e-08
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 46/131 (35%)
Query: 263 TTSSKALDAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKDMI 322
TT ++ E E ED E ED E+GD DG D +E
Sbjct: 669 TTLQSKSESEEDDEEDEDDEDEDE----EEEDDENGDSSEDGGDSSE------------- 711
Query: 323 PGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDED 382
+DE ED DE+E++DED+DDDED+DEDED
Sbjct: 712 -----------------------------SSSEDESEDGDENEEDDEDEDDDEDDDEDED 742
Query: 383 EDEEKDSDTGS 393
+ E S + S
Sbjct: 743 NESEGSSSSSS 753
Score = 54.3 bits (129), Expect = 1e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 359 EDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLG 418
+ + E E++DE+D+DDEDEDE+E++DE DS + + SE + E DE E +
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 731
Query: 419 TSDREDQNE 427
D +D +
Sbjct: 732 DDDEDDDED 740
Score = 53.5 bits (127), Expect = 2e-06
Identities = 26/75 (34%), Positives = 42/75 (55%), Gaps = 18/75 (24%)
Query: 352 DEEDDEDED------------------EDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGS 393
++ED+E+ED EDE ED DE+++DDEDED+DED+DE++D+++
Sbjct: 688 EDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEG 747
Query: 394 LELVDMKSETDQEAD 408
S ++D
Sbjct: 748 SSSSSSSSGDSSDSD 762
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
Length = 706
Score = 64.3 bits (155), Expect = 1e-09
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 258 FHGPPTTSSKALDAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNG 317
F P K AA + E ED + ED E DD + D E +
Sbjct: 168 FEPPIVKGVKPAKAAPAAPASEDEEDDED------EDDEEDDDEEEEDDSEEEVMEITTA 221
Query: 318 LKDMIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDE 377
G K TP KV + + + +EEDDE+EDED DEDED++++DDED+
Sbjct: 222 -----KGKK-------TPAKV----VPMKAKSVAEEEDDEEEDED-DEDEDDEEEDDEDD 264
Query: 378 DEDEDEDEEKDSDTGSLELVDMKSETDQEA 407
DE+E+E+E + G + K + EA
Sbjct: 265 DEEEEEEEPVKAAPGKRKKEMTKQKEAPEA 294
Score = 62.0 bits (149), Expect = 5e-09
Identities = 54/214 (25%), Positives = 86/214 (39%), Gaps = 58/214 (27%)
Query: 241 KKGEFKSQAVYLK--RKGAFHGPPTTSSKALDAAERLSSVESTEDRSELFVVSTEDPESG 298
KKG +++A+ +KGA T +K + +S ED E ED +
Sbjct: 108 KKGAAQAKALVPTPGKKGA-----ATPAKGAKNGKNAKKEDSDEDEDE------EDEDDS 156
Query: 299 DDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDED 358
D+ D + E P G+K P K + DEEDDED
Sbjct: 157 DEDEDDEEEDEFEPPIVKGVK---------------PAKA-----APAAPASEDEEDDED 196
Query: 359 EDEDEDEDEDEDDDDDED-------------------------EDEDEDEDEEKDSDTGS 393
ED++ED+DE+E+DD +E+ E+ED++E++E D D
Sbjct: 197 EDDEEDDDEEEEDDSEEEVMEITTAKGKKTPAKVVPMKAKSVAEEEDDEEEDEDDEDEDD 256
Query: 394 LELVDMKSETDQEADDEVEINTGLGTSDREDQNE 427
E D + ++E ++ V+ G + Q E
Sbjct: 257 EEEDDEDDDEEEEEEEPVKAAPGKRKKEMTKQKE 290
>IFH1_YEAST (P39520) IFH1 protein (RRP3 protein)
Length = 1085
Score = 63.9 bits (154), Expect = 1e-09
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 38/252 (15%)
Query: 261 PPTTSSKALDAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAERMPGFQNGLKD 320
PPT S+ R S + S+E S+ S D+N ++P + +N + +
Sbjct: 42 PPTLSTTR---PRRFSLIYSSE--------SSLSDVSDSDKNKSTNPHKIKRKAKN-ISN 89
Query: 321 MIPGVKVKIFKVITPEKVDKD---LISKVIEQIID---EEDDEDEDEDEDEDEDEDDDDD 374
G K K+ + ++D D S + + D E++E+E E+E+ED+DEDDDDD
Sbjct: 90 NSQGKKSKLIQ----RQIDNDDEGTESSDYQAVTDGEESENEEEESEEEEEDDDEDDDDD 145
Query: 375 EDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVE-INTGLGT--SDREDQNEIAVK 431
+D+ D D D E SD +++ V + ++ + A + +NT T S RE+ N+
Sbjct: 146 DDDGSDSDSDSETSSDDENIDFVKLTAQRKKRAMKALSAMNTNSNTLYSSRENSNK---- 201
Query: 432 VVIGGIVQKLSSNISTRDLLRVPAKLEIKKRGSFSFTVEKEVNQQDGQAKGKSSSDKSTK 491
KLS + + E K++ ++E N+++ G +++ ++
Sbjct: 202 ----NKSVKLSPKKENEE-----EQKEEKEKEKEEQQKQQESNKKEVNGSGTTTTQQALS 252
Query: 492 FLGRRRVDHVIF 503
F ++ D + F
Sbjct: 253 FKFKKEDDGISF 264
>CAQ1_CHICK (P19204) Calsequestrin, skeletal muscle isoform
precursor (Calsequestrin 1) (Aspartactin)
(Laminin-binding protein)
Length = 406
Score = 63.9 bits (154), Expect = 1e-09
Identities = 23/47 (48%), Positives = 40/47 (84%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEE 386
+D I V+ I+ EDD+D+D+D+D+D+D+DDDDD+D+D+D+D+D++
Sbjct: 359 EDWIEDVLSGKINTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 405
Score = 58.2 bits (139), Expect = 7e-08
Identities = 19/44 (43%), Positives = 37/44 (83%)
Query: 347 IEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
IE ++ + + ++D+D+D+D+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 362 IEDVLSGKINTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 405
Score = 57.4 bits (137), Expect = 1e-07
Identities = 20/45 (44%), Positives = 37/45 (81%)
Query: 338 VDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDED 382
++ L K+ + D++DD+D+D+D+D+D+D+DDDDD+D+D+D+D
Sbjct: 362 IEDVLSGKINTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 406
Score = 47.0 bits (110), Expect = 2e-04
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 12/54 (22%)
Query: 349 QIIDEED----DEDEDEDED--------EDEDEDDDDDEDEDEDEDEDEEKDSD 390
+I D++D +E ED ED ED+D+DDDDD+D+D+D+D+D++ D D
Sbjct: 345 EIRDDDDLPTAEELEDWIEDVLSGKINTEDDDDDDDDDDDDDDDDDDDDDDDDD 398
>YHT1_YEAST (P38835) Hypothetical 95.1 kDa protein in ACT5-YCK1
intergenic region
Length = 840
Score = 63.2 bits (152), Expect = 2e-09
Identities = 21/43 (48%), Positives = 37/43 (85%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSL 394
D +D ED+D+D+D+D+D+DDD+D+D+D+D+D+D++ D D G +
Sbjct: 796 DGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDGQI 838
Score = 60.5 bits (145), Expect = 1e-08
Identities = 21/39 (53%), Positives = 34/39 (86%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
D + D+ ED+D+D+D+D+DDDDDED+D+D+D+D++ D D
Sbjct: 794 DGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDD 832
Score = 59.7 bits (143), Expect = 3e-08
Identities = 22/37 (59%), Positives = 32/37 (86%)
Query: 354 EDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
EDD D D+ ED+D+D+DDDDD+D+DED+D+D++ D D
Sbjct: 792 EDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDD 828
Score = 58.9 bits (141), Expect = 4e-08
Identities = 20/39 (51%), Positives = 34/39 (86%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+++ D D+ ED+D+D+D+DDDDD+DED+D+D+D++ D D
Sbjct: 792 EDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDD 830
Score = 57.0 bits (136), Expect = 2e-07
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEV 411
D ED ++D D D+ ED+DDDDD+D+D+D+DED++ D D + D + DD+
Sbjct: 786 DAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDD---------DDDDDDDDDDDG 836
Query: 412 EI 413
+I
Sbjct: 837 QI 838
Score = 52.0 bits (123), Expect = 5e-06
Identities = 18/52 (34%), Positives = 37/52 (70%)
Query: 339 DKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+K+ I + D +D+ + +D ++D+D+DDDDD+D+D+++D+D++ D D
Sbjct: 776 NKNAIVGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDD 827
Score = 42.7 bits (99), Expect = 0.003
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 359 EDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADD 409
+D ++ ++D D DD ED+D+D+D+D++ D D + D + D + DD
Sbjct: 785 KDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDD 835
Score = 39.3 bits (90), Expect = 0.036
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 361 EDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDE 410
+D ++ ++D D D+ ED+D+D+D++ D D + D + D + DD+
Sbjct: 785 KDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDD 834
Score = 35.4 bits (80), Expect = 0.52
Identities = 15/52 (28%), Positives = 29/52 (54%)
Query: 365 EDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTG 416
+D ++ +DD D D+ ED+D++ D D + D + D + DD+ + + G
Sbjct: 785 KDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDG 836
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor
(SBP)
Length = 279
Score = 63.2 bits (152), Expect = 2e-09
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 339 DKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVD 398
DKD + + D++DD+++D +ED D++ DD DD++ED+D D++ +KD GS + D
Sbjct: 180 DKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDDEEDDDNDKENDKDDGEGSGDDDD 239
Query: 399 MKSETDQEADDEVEINTGLGTSDREDQN 426
E D + DD + G D ED +
Sbjct: 240 NDDEDDDKDDDGGSGDDGDDGDDDEDDD 267
Score = 58.9 bits (141), Expect = 4e-08
Identities = 25/81 (30%), Positives = 49/81 (59%), Gaps = 5/81 (6%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADD-- 409
D+EDD+DE +D++E++ D D+D D D+D D+D++ D ++ D + + D + +D
Sbjct: 162 DKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDVDDERDDKDDDEEDDD 221
Query: 410 ---EVEINTGLGTSDREDQNE 427
E + + G G+ D +D ++
Sbjct: 222 NDKENDKDDGEGSGDDDDNDD 242
Score = 52.0 bits (123), Expect = 5e-06
Identities = 25/75 (33%), Positives = 42/75 (55%), Gaps = 12/75 (16%)
Query: 348 EQIIDEEDDEDEDEDEDEDE------------DEDDDDDEDEDEDEDEDEEKDSDTGSLE 395
E + DE DD+D+DE++D+++ D+DD+DDED+D+D+D D D G +
Sbjct: 204 EDVDDERDDKDDDEEDDDNDKENDKDDGEGSGDDDDNDDEDDDKDDDGGSGDDGDDGDDD 263
Query: 396 LVDMKSETDQEADDE 410
D + D ++E
Sbjct: 264 EDDDGGDDDNGDEEE 278
Score = 51.6 bits (122), Expect = 7e-06
Identities = 31/84 (36%), Positives = 48/84 (56%), Gaps = 17/84 (20%)
Query: 352 DEEDDEDEDEDEDEDEDEDD-----DDDE---DEDEDEDEDEEKDSDTGSLELVDMKSET 403
++ DDE +D+D+DE++D++D DD E D+D+++DED++KD D GS + D
Sbjct: 204 EDVDDERDDKDDDEEDDDNDKENDKDDGEGSGDDDDNDDEDDDKDDDGGSGD--DGDDGD 261
Query: 404 DQEADDEVEINTGLGTSDREDQNE 427
D E DD G D D+ E
Sbjct: 262 DDEDDDG-------GDDDNGDEEE 278
Score = 42.7 bits (99), Expect = 0.003
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 352 DEEDDEDE------DEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSE 402
D+E+D+D+ D+D D+++D+ DDD D+ +D D+++D D G + D + E
Sbjct: 223 DKENDKDDGEGSGDDDDNDDEDDDKDDDGGSGDDGDDGDDDEDDDGGDDDNGDEEEE 279
>UBF1_XENLA (P25979) Nucleolar transcription factor 1 (Upstream
binding factor-1) (UBF-1) (xUBF-1)
Length = 677
Score = 62.4 bits (150), Expect = 4e-09
Identities = 25/68 (36%), Positives = 46/68 (66%)
Query: 345 KVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETD 404
K++ Q ++DDED+D+DEDED+D+D+D+D+++ ++ + E SD S + + + E
Sbjct: 585 KLVAQSKSDDDDEDDDDDEDEDDDDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDEEG 644
Query: 405 QEADDEVE 412
+E +DE E
Sbjct: 645 EEDEDEEE 652
Score = 61.2 bits (147), Expect = 9e-09
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 331 KVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
K++ K D D DE+DD+DEDED+D+DEDED +D ++ + + ++DS+
Sbjct: 585 KLVAQSKSDDD----------DEDDDDDEDEDDDDDEDEDKEDSSEDGDSSESSSDEDSE 634
Query: 391 TGSLELVDMKSETD---QEADDEVEINTGLGTSDREDQNE 427
G E D + E D +E DD+ E + +S D ++
Sbjct: 635 DGE-ENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSD 673
Score = 37.0 bits (84), Expect = 0.18
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 291 STEDPESGDDRNDGSDPAERMPGFQNGLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQI 350
S +D E DD D D + ++ +D + D S+ E+
Sbjct: 592 SDDDDEDDDDDEDEDDDDDEDEDKEDSSEDG------------DSSESSSDEDSEDGEEN 639
Query: 351 IDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKD 388
DEE +EDEDE+ED+D++E + D + +
Sbjct: 640 EDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDSDSN 677
Score = 34.3 bits (77), Expect = 1.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+E+++ +EDEDE+ED+D+++ + + DS+
Sbjct: 639 NEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDSDSN 677
>SEC7_YEAST (P11075) Protein transport protein SEC7
Length = 2009
Score = 62.4 bits (150), Expect = 4e-09
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 352 DEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEE-----KDSDTGSLELVDMKSETDQE 406
DE +D DEDEDEDEDEDED+ D++DED D E +DS++ S E + S D+E
Sbjct: 90 DEGEDGDEDEDEDEDEDEDNGDEDDEDVDSSSSETSSEDGEDSESVSGESTESSSGEDEE 149
Query: 407 ADDEVEINTGLGTSDREDQNE 427
+ DE + NT +S E +E
Sbjct: 150 S-DESDGNTSNSSSGDESGSE 169
Score = 52.8 bits (125), Expect = 3e-06
Identities = 32/93 (34%), Positives = 42/93 (44%), Gaps = 27/93 (29%)
Query: 353 EEDDEDEDEDEDEDEDEDDDDDEDED---------------------------EDEDEDE 385
E+ DEDEDEDEDEDED D+DDED D EDE+ DE
Sbjct: 93 EDGDEDEDEDEDEDEDNGDEDDEDVDSSSSETSSEDGEDSESVSGESTESSSGEDEESDE 152
Query: 386 EKDSDTGSLELVDMKSETDQEADDEVEINTGLG 418
+ + S + SE ++E ++E E G
Sbjct: 153 SDGNTSNSSSGDESGSEEEEEEEEEEEEEENAG 185
Score = 44.3 bits (103), Expect = 0.001
Identities = 26/84 (30%), Positives = 42/84 (49%), Gaps = 19/84 (22%)
Query: 352 DEEDDEDEDEDEDEDED--------EDDDDDED-----------EDEDEDEDEEKDSDTG 392
DE++DED +++DED D ED +D E EDE+ DE + S++
Sbjct: 102 DEDEDEDNGDEDDEDVDSSSSETSSEDGEDSESVSGESTESSSGEDEESDESDGNTSNSS 161
Query: 393 SLELVDMKSETDQEADDEVEINTG 416
S + + E ++E ++E E N G
Sbjct: 162 SGDESGSEEEEEEEEEEEEEENAG 185
Score = 44.3 bits (103), Expect = 0.001
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 360 DEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEADDEVEINTGLGT 419
+E ED ++ DD+ ED DEDEDEDE++D D G + DDE ++ T
Sbjct: 78 EETEDTNDKRHDDEGEDGDEDEDEDEDEDEDNG-------------DEDDEDVDSSSSET 124
Query: 420 S--DREDQNEIA 429
S D ED ++
Sbjct: 125 SSEDGEDSESVS 136
Score = 39.7 bits (91), Expect = 0.027
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 253 KRKGAFHGPPTTSSKAL--DAAERLSSVESTEDRSELFVVSTEDPESGDDRNDGSDPAER 310
K KG + T +K DA + + E TED ++ ++ E GD+ D + +
Sbjct: 50 KCKGPENAGSTAETKETSNDATNGMKTPEETEDTNDKR--HDDEGEDGDEDEDEDEDEDE 107
Query: 311 MPGFQNGLKDMIPGVKVKIFKVITPEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDED 370
NG +D V + + + D + +S + ED+E ++ D +
Sbjct: 108 ----DNGDEDD-EDVDSSSSETSSEDGEDSESVSGESTESSSGEDEESDESDGNTSNSSS 162
Query: 371 DDD---DEDEDEDEDEDEEKDSDTGSLELVDMKSETDQEA 407
D+ +E+E+E+E+E+EE+++ ++ D D A
Sbjct: 163 GDESGSEEEEEEEEEEEEEENAGEPAIAHQDSVPTNDSTA 202
>CAQ2_RAT (P51868) Calsequestrin, cardiac muscle isoform precursor
(Calsequestrin 2)
Length = 413
Score = 62.4 bits (150), Expect = 4e-09
Identities = 26/51 (50%), Positives = 36/51 (69%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+D I V+ I+ EDD++EDED+D D D DDDDD+D++ DED D+ D D
Sbjct: 359 EDWIEDVLSGKINTEDDDNEDEDDDGDNDNDDDDDDDDNSDEDNDDSDDDD 409
Score = 57.4 bits (137), Expect = 1e-07
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 340 KDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSD 390
+D++S I D+ +DED+D D D D+D+DDDD+ DED D+ +D++ D +
Sbjct: 363 EDVLSGKINTEDDDNEDEDDDGDNDNDDDDDDDDNSDEDNDDSDDDDDDDE 413
Score = 43.1 bits (100), Expect = 0.002
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 349 QIIDEEDDEDEDEDEDEDED-------EDDDDDEDEDEDEDEDEEKDSDTGSLELVDMKS 401
+I D++D +E ED ED +DDD+EDED+D D D + D D D
Sbjct: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDNEDEDDDGDNDNDDDDDDDDNSDEDNDD 404
Query: 402 ETDQEADDE 410
D + DDE
Sbjct: 405 SDDDDDDDE 413
Score = 42.7 bits (99), Expect = 0.003
Identities = 23/76 (30%), Positives = 38/76 (49%), Gaps = 10/76 (13%)
Query: 335 PEKVDKDLISKVIEQIIDEEDDEDEDEDEDEDEDEDDDDDEDEDEDEDEDEEKDSDTGSL 394
P+ D ++ + I D + ED+D + DEDDD D D D+D+D+D+ D D
Sbjct: 347 PDDDDLPTAEELEDWIEDVLSGKINTEDDDNE-DEDDDGDNDNDDDDDDDDNSDED---- 401
Query: 395 ELVDMKSETDQEADDE 410
++D + DD+
Sbjct: 402 -----NDDSDDDDDDD 412
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,260,308
Number of Sequences: 164201
Number of extensions: 4383666
Number of successful extensions: 88965
Number of sequences better than 10.0: 1556
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 396
Number of HSP's that attempted gapping in prelim test: 34356
Number of HSP's gapped (non-prelim): 13661
length of query: 700
length of database: 59,974,054
effective HSP length: 117
effective length of query: 583
effective length of database: 40,762,537
effective search space: 23764559071
effective search space used: 23764559071
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0100a.10