BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0590c.4
(84 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA42537.1| wound induced protein [Lycopersicon esculentum] ... 54 1e-06
emb|CAB78150.1| probable wound-induced protein [Arabidopsis thal... 54 1e-06
dbj|BAC42478.1| unknown protein [Arabidopsis thaliana] gi|284167... 53 2e-06
ref|XP_480360.1| unknown protein [Oryza sativa (japonica cultiva... 50 1e-05
ref|XP_474027.1| OSJNBa0043L09.23 [Oryza sativa (japonica cultiv... 49 3e-05
ref|XP_474023.1| OSJNBa0043L09.19 [Oryza sativa (japonica cultiv... 49 3e-05
dbj|BAD45552.1| unknown protein [Oryza sativa (japonica cultivar... 47 9e-05
ref|XP_474022.1| OSJNBa0043L09.18 [Oryza sativa (japonica cultiv... 45 5e-04
emb|CAB65284.1| putative wound-induced protein [Medicago sativa ... 43 0.002
ref|XP_474029.1| OSJNBa0043L09.25 [Oryza sativa (japonica cultiv... 43 0.002
ref|XP_474028.1| OSJNBa0043L09.24 [Oryza sativa (japonica cultiv... 42 0.005
gb|AAM67307.1| unknown [Arabidopsis thaliana] 39 0.044
emb|CAB80073.1| putative protein [Arabidopsis thaliana] gi|35496... 37 0.13
ref|NP_912746.1| unnamed protein product [Oryza sativa (japonica... 32 3.1
dbj|BAD81222.1| unknown protein [Oryza sativa (japonica cultivar... 32 3.1
gb|AAD19782.1| unknown protein [Arabidopsis thaliana] gi|2541154... 32 4.1
ref|XP_474021.1| OSJNBa0043L09.17 [Oryza sativa (japonica cultiv... 31 9.1
ref|YP_193748.1| aspartate aminotransferase [Lactobacillus acido... 31 9.1
>emb|CAA42537.1| wound induced protein [Lycopersicon esculentum]
gi|82114|pir||S19773 wound-induced protein - tomato
(fragment)
Length = 76
Score = 53.9 bits (128), Expect = 1e-06
Identities = 32/72 (44%), Positives = 44/72 (60%), Gaps = 3/72 (4%)
Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-NNITPNGNSSSAAAIPSKVKRSNQEFM 68
VGAVEALKD++G+ R NY LRSL Q N + + SS+ S+ ++E +
Sbjct: 7 VGAVEALKDQVGLC--RWNYPLRSLAQHTKNNVRSYSQAKKLSSSITTKSEKMEKSEESL 64
Query: 69 RKVMDLNCWGPS 80
RKVM L+CWGP+
Sbjct: 65 RKVMYLSCWGPN 76
>emb|CAB78150.1| probable wound-induced protein [Arabidopsis thaliana]
gi|4538956|emb|CAB39780.1| probable wound-induced
protein [Arabidopsis thaliana]
gi|21553934|gb|AAM63015.1| probable wound-induced
protein [Arabidopsis thaliana]
gi|3695408|gb|AAC62808.1| contains similarity to
Solanum lycopersicum (tomato) wound-induced protein
(GB:X59882) [Arabidopsis thaliana]
gi|15234987|ref|NP_192765.1| wound-responsive family
protein [Arabidopsis thaliana] gi|7488223|pir||T01970
probable wound-induced protein T9A4.6 - Arabidopsis
thaliana
Length = 90
Score = 53.5 bits (127), Expect = 1e-06
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 3 AATRSLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKR 62
A T ++ +GAVEALKD+LG+ R NY LRS+ Q + N G S++++ + V
Sbjct: 7 AWTVAVSIGAVEALKDQLGLC--RWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTS 64
Query: 63 SNQ--------EFMRKVMDLNCWGPS 80
S + E +R VM L+CWGP+
Sbjct: 65 SGESEKAKKAEESLRTVMYLSCWGPN 90
>dbj|BAC42478.1| unknown protein [Arabidopsis thaliana] gi|28416769|gb|AAO42915.1|
At4g10262 [Arabidopsis thaliana]
gi|30681389|ref|NP_849355.1| wound-responsive protein,
putative [Arabidopsis thaliana]
Length = 83
Score = 52.8 bits (125), Expect = 2e-06
Identities = 36/86 (41%), Positives = 53/86 (60%), Gaps = 9/86 (10%)
Query: 1 MSAATRSLIV----GAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAI 56
MS+A+++ +V GAVEALKD+LGV R NY +RS Q + N S+++I
Sbjct: 1 MSSASKTWMVAASIGAVEALKDQLGVC--RWNYVIRSANQYLRNNLRSVSQAKKLSSSSI 58
Query: 57 P--SKVKRSNQEFMRKVMDLNCWGPS 80
+K K++ +E +R VM L+CWGPS
Sbjct: 59 DYTNKTKQA-EESLRTVMYLSCWGPS 83
>ref|XP_480360.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|45735899|dbj|BAD12931.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|38636812|dbj|BAD03053.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 90
Score = 50.4 bits (119), Expect = 1e-05
Identities = 33/78 (42%), Positives = 47/78 (59%), Gaps = 4/78 (5%)
Query: 5 TRSLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS-SSAAAIPSKVKRS 63
T ++ VGAVE LKD+ G+ R NYALRSL + + +G + +S+ A +R
Sbjct: 15 TAAMSVGAVEGLKDQSGLC--RWNYALRSLHGAAMDTLMLQVHGGAGASSPAAAMAAERP 72
Query: 64 NQEFMRKVMDLN-CWGPS 80
+E MR+VM L+ CWGPS
Sbjct: 73 EEEGMRRVMYLSCCWGPS 90
>ref|XP_474027.1| OSJNBa0043L09.23 [Oryza sativa (japonica cultivar-group)]
gi|38344803|emb|CAE03004.2| OSJNBa0043L09.23 [Oryza
sativa (japonica cultivar-group)]
Length = 87
Score = 48.9 bits (115), Expect = 3e-05
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 7 SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS--SSAAAIPSKVKRSN 64
++ VGAVEALKD+ G+ R NYALRS+ + N G +SAAA+ + +
Sbjct: 12 AMSVGAVEALKDQGGLC--RWNYALRSIHKAAKANAAGVSQGKKLPASAAAVAERRRAEK 69
Query: 65 -QEFMRKVMDLNCWGPS 80
+E +R VM L+CWGP+
Sbjct: 70 AEEGLRTVMYLSCWGPN 86
>ref|XP_474023.1| OSJNBa0043L09.19 [Oryza sativa (japonica cultivar-group)]
gi|38344799|emb|CAE03000.2| OSJNBa0043L09.19 [Oryza
sativa (japonica cultivar-group)]
Length = 86
Score = 48.9 bits (115), Expect = 3e-05
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 7 SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS--SSAAAIPSKVKRSN 64
++ VGAVEALKD+ G+ R NYALRS+ + N G +SAAA+ + +
Sbjct: 12 AMSVGAVEALKDQGGLC--RWNYALRSIHKAAKANAAGVSQGKKLPASAAAVAERRRAEK 69
Query: 65 -QEFMRKVMDLNCWGPS 80
+E +R VM L+CWGP+
Sbjct: 70 AEEGLRTVMYLSCWGPN 86
>dbj|BAD45552.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 103
Score = 47.4 bits (111), Expect = 9e-05
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 18/87 (20%)
Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNG--------------NSSSAAA 55
+ AVEALKD+ G+ R +YALRSL QR +T +SS AAA
Sbjct: 19 MSAVEALKDQAGLC--RWDYALRSLYQRAAAAKQVTGRAVPVSLSSQTGGAAASSSPAAA 76
Query: 56 I--PSKVKRSNQEFMRKVMDLNCWGPS 80
++ KRS +E M+K L CWGP+
Sbjct: 77 CGRAARSKRSEEEKMQKAYHLVCWGPN 103
>ref|XP_474022.1| OSJNBa0043L09.18 [Oryza sativa (japonica cultivar-group)]
gi|38344798|emb|CAE02999.2| OSJNBa0043L09.18 [Oryza
sativa (japonica cultivar-group)]
Length = 97
Score = 45.1 bits (105), Expect = 5e-04
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 2 SAATRSLIVGAVEALKDKLGVYNRRRNYALRSLQQR----VVKNNNITPNGNSS-----S 52
S+ ++ VG VEALKD+ G+ R NYA R+LQQR V + +G + +
Sbjct: 11 SSWAAAMSVGTVEALKDQAGLC--RWNYAFRTLQQRGRQQAVAGTSGAKSGGGARALQPA 68
Query: 53 AAAIPSKVKRSNQEFMRKVMDLNCWGPS 80
AAA + + +E +R VM L+ WGP+
Sbjct: 69 AAAAARRKAQQQEEELRTVMYLSNWGPN 96
>emb|CAB65284.1| putative wound-induced protein [Medicago sativa subsp. x varia]
Length = 90
Score = 43.1 bits (100), Expect = 0.002
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGN----SSSAAAIPSKVK---- 61
VG VEALKD+ G+ R N ALRS Q V + N S+S A + S++K
Sbjct: 14 VGVVEALKDQ-GLC--RWNCALRSAQHHVKHHLRSLSQANKISSSNSYAMVSSRLKEQEA 70
Query: 62 RSNQEFMRKVMDLNCWGPS 80
+ ++E +R VM L+CWGP+
Sbjct: 71 KQSEESLRTVMYLSCWGPN 89
>ref|XP_474029.1| OSJNBa0043L09.25 [Oryza sativa (japonica cultivar-group)]
gi|38344805|emb|CAE03006.2| OSJNBa0043L09.25 [Oryza
sativa (japonica cultivar-group)]
Length = 86
Score = 42.7 bits (99), Expect = 0.002
Identities = 29/74 (39%), Positives = 43/74 (57%), Gaps = 5/74 (6%)
Query: 7 SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS--SSAAAIPSKVKRSN 64
++ VGAVEALKD+ G+ R NYALRS+ + N G +SAAA+ + +
Sbjct: 12 AMSVGAVEALKDQGGLC--RWNYALRSIHKAAKANAAGVSQGKKLPASAAAVAERRRAEK 69
Query: 65 -QEFMRKVMDLNCW 77
+E +R VM ++CW
Sbjct: 70 AEEGLRTVMYISCW 83
>ref|XP_474028.1| OSJNBa0043L09.24 [Oryza sativa (japonica cultivar-group)]
gi|38344804|emb|CAE03005.2| OSJNBa0043L09.24 [Oryza
sativa (japonica cultivar-group)]
Length = 87
Score = 41.6 bits (96), Expect = 0.005
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 7 SLIVGAVEALKDKLGVYNRRRNYALRSLQQRVVKNNNITPNGNS---SSAAAIPSKVKRS 63
++ VGAVEALKD+ G+ R NYALRS+ + N + +SAAA+ + +
Sbjct: 12 AMSVGAVEALKDQAGLC--RWNYALRSIHRAAKANARAGVSRGKKLPASAAAVAERRRAE 69
Query: 64 N-QEFMRKVMDLNCW 77
+E +R VM ++CW
Sbjct: 70 KAEEGLRTVMYISCW 84
>gb|AAM67307.1| unknown [Arabidopsis thaliana]
Length = 95
Score = 38.5 bits (88), Expect = 0.044
Identities = 30/84 (35%), Positives = 44/84 (51%), Gaps = 12/84 (14%)
Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-------NNITPNGNSSSAAAIPSKVKR 62
+ AVE LKD+ GV R NY LR L + + + +P +SSSA +I SK
Sbjct: 15 IAAVEVLKDQ-GV--ARWNYPLRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLS 71
Query: 63 SN--QEFMRKVMDLNCWGPSTTKF 84
+ + K M L+C+GP+T +F
Sbjct: 72 TTPFETSFEKAMGLSCFGPTTVRF 95
>emb|CAB80073.1| putative protein [Arabidopsis thaliana]
gi|3549658|emb|CAA20569.1| putative protein
[Arabidopsis thaliana] gi|15234992|ref|NP_195082.1|
expressed protein [Arabidopsis thaliana]
gi|7487093|pir||T04973 hypothetical protein T16L1.50 -
Arabidopsis thaliana
Length = 95
Score = 37.0 bits (84), Expect = 0.13
Identities = 29/84 (34%), Positives = 43/84 (50%), Gaps = 12/84 (14%)
Query: 10 VGAVEALKDKLGVYNRRRNYALRSLQQRVVKN-------NNITPNGNSSSAAAIPSKVKR 62
+ AVE LKD+ GV R NY R L + + + +P +SSSA +I SK
Sbjct: 15 IAAVEVLKDQ-GV--ARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPLS 71
Query: 63 SN--QEFMRKVMDLNCWGPSTTKF 84
+ + K M L+C+GP+T +F
Sbjct: 72 TTPFETSFEKAMGLSCFGPTTVRF 95
>ref|NP_912746.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 732
Score = 32.3 bits (72), Expect = 3.1
Identities = 13/47 (27%), Positives = 27/47 (56%)
Query: 20 LGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKRSNQE 66
L Y++R +++Q + +KNN++ P+G++S +PS Q+
Sbjct: 490 LAQYSKRTENMHQAVQPQFLKNNSLIPSGSTSRPVHVPSSAGNERQD 536
>dbj|BAD81222.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 737
Score = 32.3 bits (72), Expect = 3.1
Identities = 13/47 (27%), Positives = 27/47 (56%)
Query: 20 LGVYNRRRNYALRSLQQRVVKNNNITPNGNSSSAAAIPSKVKRSNQE 66
L Y++R +++Q + +KNN++ P+G++S +PS Q+
Sbjct: 495 LAQYSKRTENMHQAVQPQFLKNNSLIPSGSTSRPVHVPSSAGNERQD 541
>gb|AAD19782.1| unknown protein [Arabidopsis thaliana] gi|25411544|pir||G84513
hypothetical protein At2g14070 [imported] - Arabidopsis
thaliana gi|15225570|ref|NP_179023.1| wound-responsive
protein-related [Arabidopsis thaliana]
Length = 196
Score = 32.0 bits (71), Expect = 4.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 26 RRNYALRSLQQ------RVVKNNNITPNGNSSSAAAIPSKVKRSN-----QEFMRKVMDL 74
R NY LR + R + + P+ SSS+++ VK ++ + M +VM L
Sbjct: 127 RWNYPLRFFNKDVRARLRAIAVTSRPPSSASSSSSSSADLVKENHPMPKSEASMERVMCL 186
Query: 75 NCWGPSTTKF 84
+C+GP+T +F
Sbjct: 187 SCFGPTTVRF 196
>ref|XP_474021.1| OSJNBa0043L09.17 [Oryza sativa (japonica cultivar-group)]
gi|38344797|emb|CAE02998.2| OSJNBa0043L09.17 [Oryza
sativa (japonica cultivar-group)]
Length = 90
Score = 30.8 bits (68), Expect = 9.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 54 AAIPSKVKRSNQEFMRKVMDLNCWGPS 80
AA+ +++R +E VM L CWGPS
Sbjct: 64 AAVAERMRRRRREKSENVMQLVCWGPS 90
>ref|YP_193748.1| aspartate aminotransferase [Lactobacillus acidophilus NCFM]
gi|58254480|gb|AAV42717.1| aspartate aminotransferase
[Lactobacillus acidophilus NCFM]
Length = 391
Score = 30.8 bits (68), Expect = 9.1
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1 MSAATRSLIVGAVEALKDKLG-------VYNRRRNYALRSLQQRVVKNNNITPNGNSSSA 53
++ T S A+EAL++ L VY +RR++ L++L++ + + + P+G
Sbjct: 268 VTTTTDSSQAAAIEALENGLDDPDEYRRVYQKRRDFVLKALEE--MGMHAVKPDGAFYIF 325
Query: 54 AAIPSKVKRSNQEF 67
A IP+K + + +F
Sbjct: 326 AKIPAKYGKDDMQF 339
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.126 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,272,371
Number of Sequences: 2540612
Number of extensions: 3858723
Number of successful extensions: 14632
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14617
Number of HSP's gapped (non-prelim): 18
length of query: 84
length of database: 863,360,394
effective HSP length: 60
effective length of query: 24
effective length of database: 710,923,674
effective search space: 17062168176
effective search space used: 17062168176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0590c.4