BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.12
(1332 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278... 1993 0.0
gb|AAG51247.1| copia-type polyprotein, putative; 28768-32772 [Ar... 1399 0.0
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 1399 0.0
gb|AAF25964.2| F6N18.1 [Arabidopsis thaliana] 1253 0.0
gb|AAG60117.1| copia-type polyprotein, putative [Arabidopsis tha... 1172 0.0
gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 1169 0.0
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] gi... 1166 0.0
gb|AAG50765.1| copia-type polyprotein, putative [Arabidopsis tha... 1153 0.0
gb|AAF16534.1| T26F17.17 [Arabidopsis thaliana] 1100 0.0
gb|AAT38758.1| putative gag-pol polyprotein [Solanum demissum] 1082 0.0
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 1044 0.0
gb|AAP46257.1| putative polyprotein [Oryza sativa (japonica cult... 977 0.0
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 937 0.0
gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsi... 936 0.0
ref|XP_474043.1| OSJNBb0034I13.10 [Oryza sativa (japonica cultiv... 895 0.0
gb|AAP51989.1| putative pol polyprotein [Oryza sativa (japonica ... 892 0.0
gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsi... 874 0.0
ref|NP_912850.1| unnamed protein product [Oryza sativa (japonica... 851 0.0
gb|AAV59370.1| hypothetical protein [Oryza sativa (japonica cult... 823 0.0
ref|XP_506380.1| PREDICTED OSJNBa0007H12.22 gene product [Oryza ... 798 0.0
>emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278365|pir||T47841
hypothetical protein T2O9.150 - Arabidopsis thaliana
Length = 1339
Score = 1993 bits (5162), Expect = 0.0
Identities = 969/1339 (72%), Positives = 1130/1339 (84%), Gaps = 8/1339 (0%)
Query: 1 MSDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKA 60
MS SEKF QPAIP+FDG+YD+WSMTMENFLRS+E+W LV+EGIP + GTTP SE Q A
Sbjct: 1 MSSSEKFVQPAIPRFDGYYDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSA 60
Query: 61 VEEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRR 120
VEEAKLKDLKVKN+LFQAI REILETILDK TSK IW SMK+KY GS+KVKR QLQ +R+
Sbjct: 61 VEEAKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRK 120
Query: 121 EFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEE 180
EF+LLAMKEGEK+D+FLGRTL VVNKMK+NGE ME ST+VSKILRSLT KFNYVVCSIEE
Sbjct: 121 EFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEE 180
Query: 181 SNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRGAPRG--GRGRGR 238
SNDLS LSIDELHGSLLVHEQR+ GH +EE LKV E+R S+GRGRG RG GRGRGR
Sbjct: 181 SNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGRGRGR 240
Query: 239 GRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQTKKQEVW 298
GR N+ ++ECYKCH LGHFQYECP+WEK NYAELEEEEELLLMAYVE +Q + EVW
Sbjct: 241 GRSGTNRAIVECYKCHNLGHFQYECPEWEKNANYAELEEEEELLLMAYVEQNQANRDEVW 300
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQVISDVYY 358
+LDSGCSNHM G+KEWF +LEE F+RTVKLGNDTRM+VV KGS+++++NG+TQVI +VYY
Sbjct: 301 FLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYY 360
Query: 359 IPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRS 418
+PEL+NNLLS+GQLQE+GLAILI+DGTCKV+HP +G IM+TNMSGN MFFLLAS K S
Sbjct: 361 VPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNS 420
Query: 419 VCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHR 478
+CLQ E V KE H+ HCRFGHLN +GL+ L+HKKMV+GLP L++ ++IC CLTGKQHR
Sbjct: 421 LCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHR 480
Query: 479 EPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAF 538
E + K++ W++S QLQLVHSDICGPI P +S KRYILSFIDD TRKTWVYFLHEKSEAF
Sbjct: 481 ESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAF 540
Query: 539 VKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAE 598
FK +KA VEKEIGA +TCLRTDR EFTSNEF EFCRS GI+RQLT +TP QNGVAE
Sbjct: 541 ATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAE 600
Query: 599 RKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVH 658
RKNRTIMN VRSML+E+QVPK+FWSEA +W VHIQNR P AVE TPEEAWSG KPVV
Sbjct: 601 RKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVE 660
Query: 659 YFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEE 718
YFR+F C+ +VH+PDQ+RSKLDDKSKKCVFLGVS+ESKAWRLY PV KKI++SKDVVF+E
Sbjct: 661 YFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDE 720
Query: 719 EESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISN 778
++SWDW + + E K LECG+ED + + S N S N++ S P S
Sbjct: 721 DKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSP 780
Query: 779 TPEELVEGRVVRERRVPSWFADYETREG--LEENLNAM--MMVTENDPVSFGEAVKNKKW 834
P V +V RERR P W ADYET EG +EENL+ M MM+TE DP+ F +AVK+K W
Sbjct: 781 APSP-VAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIW 839
Query: 835 RDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQR 894
R+AM EIESI +N +WELT LPKG PIGVKWV+KTKLNEDG+V+K+KARLVAKGYAQ
Sbjct: 840 REAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQC 899
Query: 895 HEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIR 954
+ +DYTEVFAPVARLDT+R IL +++QF+WE+FQLDVKSAFLHGELKEEV+V+QP+GFIR
Sbjct: 900 YGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIR 959
Query: 955 KGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSL 1014
+GEE+KVY+L+KALYGLKQA RAWYSRIEAYF++E+FERCPSEH LFTK++ G ILIVSL
Sbjct: 960 EGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSL 1019
Query: 1015 YVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDV 1074
YVDDLIFTG+D+ MCDEFK SMMLEF+MSDLGKMK+FLG+EVKQ GIFIC RRYAR+V
Sbjct: 1020 YVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREV 1079
Query: 1075 LARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLI 1134
LARF M +SNAVKNP VPGTKL+KDE G +VDET+FKQ+VGSLMYLTVTRPDLMYGV LI
Sbjct: 1080 LARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLI 1139
Query: 1135 SRFMSSPTMSHWLAAKRILRYLKGTTDLGIFY-KKGGSNMKLMAFPDSDYAGDLDDRRST 1193
SRFMS+P MSHWLAAKRILRYLKGT +LGIFY ++ ++KLMAF DSDYAGDL+DRRST
Sbjct: 1140 SRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRST 1199
Query: 1194 SRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTE 1253
S FVF++ SG + W+SKKQ VVALSTTEAEYIAAA CACQCVWL +VLEK+G EEK++T
Sbjct: 1200 SGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATV 1259
Query: 1254 IMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIK 1313
I CDNS TIQLSK+PV HGKSKHI+VRFH+LRDLVN V+KL YC ++DQ+ADI TKP+K
Sbjct: 1260 INCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLK 1319
Query: 1314 LEQFEKLRGMLGVTEVSKV 1332
LEQFEKLR +LG+ +S+V
Sbjct: 1320 LEQFEKLRALLGMVNMSEV 1338
>gb|AAG51247.1| copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
gi|25301683|pir||E86451 probable copia-type polyprotein,
28768-32772 [imported] - Arabidopsis thaliana
Length = 1334
Score = 1399 bits (3622), Expect = 0.0
Identities = 716/1346 (53%), Positives = 941/1346 (69%), Gaps = 41/1346 (3%)
Query: 4 SEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEE 63
SEK E IPKFDG Y++W+M MEN +RSKE W +++ GIP E ++ + E+
Sbjct: 2 SEK-ESVIIPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEK 60
Query: 64 AKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFD 123
+KD KVKNYLF +I + IL+TIL KETSK++W SMK+KY G+ +V+ QLQ +RR F+
Sbjct: 61 T-VKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFE 119
Query: 124 LLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESND 183
+L MK GE + + R + + N M++ GE M S VV KILR+L KF YVVC+IEESN+
Sbjct: 120 VLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNN 179
Query: 184 LSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRG-APRGGRGRG----R 238
+ L++D L SL+VHEQ + H EE VLK + R GRGRG +P GRGRG R
Sbjct: 180 IKELTVDGLQSSLMVHEQNLSRHDVEERVLKAETQWRPDGGRGRGGSPSRGRGRGGYQGR 239
Query: 239 GRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQTKKQEVW 298
GR +N++ +EC+KCH++GH++ ECP WEK+ NY E+EE+ LLLMA+VE +++++W
Sbjct: 240 GRGYVNRDTVECFKCHKMGHYKAECPSWEKEANYVEMEED--LLLMAHVEQIGDEEKQIW 297
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQVISDVYY 358
+LDSGCSNHM G +EWFL+L+ F + V+LG+D RMAV KG +R++++G QVISDVY+
Sbjct: 298 FLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYF 357
Query: 359 IPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPM-RGVIMQTNMSGNIMFFLLASMAPKR 417
+P LKNNL S+GQLQ+KGL +I+ C+V+H + ++M + M+ N MF + A++ +
Sbjct: 358 VPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSK 417
Query: 418 SV----CLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLE--SPEKICTTC 471
CLQ V K +M H RFGHLNH+GLR+L+ K+MV GLP + E +C C
Sbjct: 418 ETEETRCLQ---VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDIC 474
Query: 472 LTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFL 531
L GKQ RE +PK S W++++ LQLVH+DICGPI P+ S KRYIL+FIDD +RK W Y L
Sbjct: 475 LKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLL 534
Query: 532 HEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP 591
EKSE F FKE+KA VE+E G + CLR+DR E+ S EFDE+C+ GI RQLT YTP
Sbjct: 535 SEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTP 594
Query: 592 *QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWS 651
QNGVAERKNR++MN+ R ML E VP+ FW EAV++ V+I NR P A+ + TPEE WS
Sbjct: 595 QQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWS 654
Query: 652 GEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVS 711
KP V + RIF +A+ VP Q+R KLD+KS KCV GVS ESKA+RLY P + KI++S
Sbjct: 655 SWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILIS 714
Query: 712 KDVVFEEEESWDWG--RIEEEIKLDILE---CGEEDQNEEENGRTDLNNLSSNSSSSSNS 766
+DV F+EE W+W +EEE+ D + GEE NG+ D + + +
Sbjct: 715 RDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAET 774
Query: 767 LPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGL------EENLNAMMMVTEN 820
+ ++LP V VR+R+ P W DY EE+ + + +
Sbjct: 775 VHQNLP----------AVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPD 824
Query: 821 DPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVE 880
DPV F EA + + WR AM AEI SIE N +WEL LP+ K IG+KW+FKTK NE G+V+
Sbjct: 825 DPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVD 884
Query: 881 KFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGEL 940
KFKARLVAKGY QR+ VD+ EVFAPVA+ DTIR+IL +AA+ W VFQLDVKSAFLHG+L
Sbjct: 885 KFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDL 944
Query: 941 KEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHIL 1000
KE+VFV+QPKGF + E KVY+LKKALYGLKQA RAWYSRIE +F +E FE+C EH L
Sbjct: 945 KEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTL 1004
Query: 1001 FTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC* 1060
F K + L+VS+YVDDLI+TG+ M + FK+SMM EF M+DLGKMKYFLGVEV Q
Sbjct: 1005 FVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDE 1064
Query: 1061 DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYL 1120
GIFI R+YA +++ ++ M N+VKNP VPG KL+K G VD T FKQ++GSL YL
Sbjct: 1065 RGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYL 1124
Query: 1121 TVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPD 1180
T TRPDL++ V+L+SR+M SP H LA KRILRY++GT DLGI Y++GG+ +L+ F D
Sbjct: 1125 TTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGAT-ELVGFVD 1183
Query: 1181 SDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRV 1240
SDYAGD+DDR+STS +VFMLG G ++W+SKKQ +V LSTTEAE+++A+ ACQ VWL V
Sbjct: 1184 SDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNV 1243
Query: 1241 LEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNS 1300
LE+IG ++ T + CDNS TI+LSKNPV HG+SKHI VR+HFLR+LV +G I+L YC +
Sbjct: 1244 LEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTT 1303
Query: 1301 QDQIADIMTKPIKLEQFEKLRGMLGV 1326
DQ+ADIMTK +K E FE+LRG +GV
Sbjct: 1304 TDQVADIMTKAVKREVFEELRGRMGV 1329
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 1399 bits (3621), Expect = 0.0
Identities = 716/1346 (53%), Positives = 940/1346 (69%), Gaps = 41/1346 (3%)
Query: 4 SEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEE 63
SEK E IPKFDG Y++W+M MEN +RSKE W +++ GIP E ++ + E+
Sbjct: 2 SEK-ESVIIPKFDGDYEHWAMLMENLIRSKEWWDIIETGIPRPERNVILTGAQRTELAEK 60
Query: 64 AKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFD 123
+KD KVKNYLF +I + IL+TIL KETSK++W SMK+KY G+ +V+ QLQ +RR F+
Sbjct: 61 T-VKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFE 119
Query: 124 LLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESND 183
+L MK GE + + R + + N M++ GE M S VV KILR+L KF YVVC+IEESN+
Sbjct: 120 VLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNN 179
Query: 184 LSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRG-APRGGRGRG----R 238
+ L++D L SL+VHEQ + H EE VLK + R GRGRG +P GRGRG R
Sbjct: 180 IKELTVDGLQSSLMVHEQNLSRHDVEERVLKAETQWRPDGGRGRGGSPSRGRGRGGYQGR 239
Query: 239 GRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMAYVEPHQTKKQEVW 298
GR +N++ +EC+KCH++GH++ ECP WEK+ NY E+EE+ LLLMA+VE +++++W
Sbjct: 240 GRGYVNRDTVECFKCHKMGHYKAECPSWEKEANYVEMEED--LLLMAHVEQIGDEEKQIW 297
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQLNGITQVISDVYY 358
+LDSGCSNHM G +EWFL+L+ F + V+LG+D RMAV KG +R++++G QVISDVY+
Sbjct: 298 FLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVISDVYF 357
Query: 359 IPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPM-RGVIMQTNMSGNIMFFLLASMAPKR 417
+P LKNNL S+GQLQ+KGL +I+ C+V+H + ++M + M+ N MF + A++ +
Sbjct: 358 VPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSK 417
Query: 418 SV----CLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLE--SPEKICTTC 471
CLQ V K +M H RFGHLNH+GLR+L+ K+MV GLP + E +C C
Sbjct: 418 ETEETRCLQ---VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDIC 474
Query: 472 LTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFL 531
L GKQ RE +PK S W++++ LQLVH+DICGPI P+ S KRYIL+FIDD +RK W Y L
Sbjct: 475 LKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLL 534
Query: 532 HEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP 591
EKSE F FKE+KA VE+E G + CLR+DR E+ S EFDE+C+ GI RQLT YTP
Sbjct: 535 SEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTP 594
Query: 592 *QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWS 651
QNGVAERKNR++MN+ R ML E VP+ FW EAV++ V+I NR P A+ + TPEE WS
Sbjct: 595 QQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWS 654
Query: 652 GEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVS 711
KP V + RIF +A+ VP Q+R KLD+KS KCV GVS ESKA+RLY P + KI++S
Sbjct: 655 SWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILIS 714
Query: 712 KDVVFEEEESWDWG--RIEEEIKLDILE---CGEEDQNEEENGRTDLNNLSSNSSSSSNS 766
+DV F+EE W+W +EEE+ D + GEE NG+ D + + +
Sbjct: 715 RDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAET 774
Query: 767 LPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGL------EENLNAMMMVTEN 820
+ ++LP V VR+R+ P W DY EE+ + +
Sbjct: 775 VHQNLP----------AVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPG 824
Query: 821 DPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVE 880
DPV F EA + + WR AM AEI SIE N +WEL LP+ K IG+KW+FKTK NE G+V+
Sbjct: 825 DPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVD 884
Query: 881 KFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGEL 940
KFKARLVAKGY QR+ VD+ EVFAPVA+ DTIR+IL +AA+ W VFQLDVKSAFLHG+L
Sbjct: 885 KFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDL 944
Query: 941 KEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHIL 1000
KE+VFV+QPKGF + E KVY+LKKALYGLKQA RAWYSRIE +F +E FE+C EH L
Sbjct: 945 KEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTL 1004
Query: 1001 FTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC* 1060
F K + L+VS+YVDDLI+TG+ M + FK+SMM EF M+DLGKMKYFLGVEV Q
Sbjct: 1005 FVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDE 1064
Query: 1061 DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYL 1120
GIFI R+YA +++ ++ M N+VKNP VPG KL+K G VD T FKQ++GSL YL
Sbjct: 1065 RGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTKAGAGDAVDPTEFKQLIGSLRYL 1124
Query: 1121 TVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPD 1180
T TRPDL++ V+L+SR+M SP H LA KRILRY++GT DLGI Y++GG+ +L+ F D
Sbjct: 1125 TTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGAT-ELVGFVD 1183
Query: 1181 SDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRV 1240
SDYAGD+DDR+STS +VFMLG G ++W+SKKQ +V LSTTEAE+++A+ ACQ VWL V
Sbjct: 1184 SDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNV 1243
Query: 1241 LEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNS 1300
LE+IG ++ T + CDNS TI+LSKNPV HG+SKHI VR+HFLR+LV +G I+L YC +
Sbjct: 1244 LEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTT 1303
Query: 1301 QDQIADIMTKPIKLEQFEKLRGMLGV 1326
DQ+ADIMTK +K E FE+LRG +GV
Sbjct: 1304 TDQVADIMTKAVKREVFEELRGRMGV 1329
>gb|AAF25964.2| F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 1253 bits (3242), Expect = 0.0
Identities = 648/1250 (51%), Positives = 851/1250 (67%), Gaps = 71/1250 (5%)
Query: 100 MKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTV 159
MK+KY G+ +V+ QLQ +RR F++L MK GE + + R + + N M++ GE M S V
Sbjct: 1 MKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKV 60
Query: 160 VSKILRSLTSKFNYVVCSIEESNDLSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQED 219
V KILR+L KF YVVC+IEESN++ L++D L SL+VHEQ + H EE VLK +
Sbjct: 61 VEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNLSRHDVEERVLKAETQW 120
Query: 220 RSSRGRGRG-APRGGRGRG----RGRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAE 274
R GRGRG +P GRGRG RGR +N++ +EC+KCH++GH++ ECP WEK+ NY E
Sbjct: 121 RPDGGRGRGGSPSRGRGRGGYQGRGRGYVNRDTVECFKCHKMGHYKAECPSWEKEANYVE 180
Query: 275 LEEEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRM 334
+EE+ LLLMA+VE +++++W+LDSGCSNHM G +EWFL+L+ F + V+LG+D RM
Sbjct: 181 MEED--LLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRM 238
Query: 335 AVVAKGSIRMQLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPM-R 393
AV KG +R++++G QVISDVY++P LKNNL S+GQLQ+KGL +I+ C+V+H +
Sbjct: 239 AVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEK 298
Query: 394 GVIMQTNMSGNIMFFLLASMAPKRSV----CLQAEAVSQKEAHM*HCRFGHLNHKGLRTL 449
++M + M+ N MF + A++ + CLQ V K +M H RFGHLNH+GLR+L
Sbjct: 299 RMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQ---VIGKANNMWHKRFGHLNHQGLRSL 355
Query: 450 SHKKMVVGLPSLE--SPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPS 507
+ K+MV GLP + E +C CL GKQ RE +PK S W++++ LQLVH+DICGPI P+
Sbjct: 356 AEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPA 415
Query: 508 WNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEF 567
S KRYIL+FIDD +RK W Y L EKSE F FKE+KA VE+E G + CLR+DR E+
Sbjct: 416 STSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEY 475
Query: 568 TSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVR 627
S EFDE+C+ GI RQLT YTP QNGVAERKNR++MN+ R ML E VP+ FW EAV+
Sbjct: 476 NSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQ 535
Query: 628 WCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCV 687
+ V+I NR P A+ + TPEE WS KP V + RIF +A+ VP Q+R KLD+KS KCV
Sbjct: 536 YAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCV 595
Query: 688 FLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWG--RIEEEIKLDILE---CGEED 742
GVS ESKA+RLY P + KI++S+DV F+EE W+W +EEE+ D + GEE
Sbjct: 596 MFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEG 655
Query: 743 QNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYE 802
NG+ D + + ++ ++LP V VR+R+ P W DY
Sbjct: 656 PEINHNGQQDQEETEEEEETVAETVHQNLP----------AVGTGGVRQRQQPVWMKDYV 705
Query: 803 TREGL------EENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVL 856
EE+ + + +DPV F EA + + WR AM AEI SIE N +WEL L
Sbjct: 706 VGNARVLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVEL 765
Query: 857 PKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVIL 916
P+ K IG+KW+FKTK NE G+V+KFKARLVAKGY QR+ VD+ EVFAPVA+ DTIR+IL
Sbjct: 766 PEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLIL 825
Query: 917 EVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALR 976
+AA+ W VFQLDVKSAFLHG+LKE+VFV+QPKGF + E KVY+LKKALYGLKQA R
Sbjct: 826 GLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPR 885
Query: 977 AWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSM 1036
AWYSRIE +F +E FE+C EH LF K + L+VS+YVDDLI+TG+ M + FK+SM
Sbjct: 886 AWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSM 945
Query: 1037 MLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKL 1096
M EF M+DLGKMKYFLGVEV Q GIFI R+YA +++ ++ M N+VKNP VPG KL
Sbjct: 946 MEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKL 1005
Query: 1097 SKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYL 1156
+K +SR+M SP H LA KRILRY+
Sbjct: 1006 TK--------------------------------AGAVSRYMESPNEQHLLAVKRILRYV 1033
Query: 1157 KGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVA 1216
+GT DLGI Y++GG+ +L+ F DSDYAGD+DDR+STS +VFMLG G ++W+SKKQ +V
Sbjct: 1034 QGTLDLGIQYERGGAT-ELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVT 1092
Query: 1217 LSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKH 1276
LSTTEAE+++A+ ACQ VWL VLE+IG ++ T + CDNS TI+LSKNPV HG+SKH
Sbjct: 1093 LSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKH 1152
Query: 1277 IDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
I VR+HFLR+LV +G I+L YC + DQ+ADIMTK +K E FE+LRG +GV
Sbjct: 1153 IHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1202
>gb|AAG60117.1| copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 1172 bits (3031), Expect = 0.0
Identities = 622/1369 (45%), Positives = 869/1369 (63%), Gaps = 66/1369 (4%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQEE-EHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG K V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DEPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 878 TIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKKALYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN V P G KLSK E
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1117
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1118 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1177
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1178 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCE 1236
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1297 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1345
>gb|AAD50001.1| Hypothetical protein [Arabidopsis thaliana] gi|25301681|pir||F86246
hypothetical protein [imported] - Arabidopsis thaliana
Length = 1352
Score = 1169 bits (3024), Expect = 0.0
Identities = 619/1369 (45%), Positives = 868/1369 (63%), Gaps = 66/1369 (4%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K NY E + +EE++LLMA + + K+ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGV ERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DEPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F +A++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 878 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKK LYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ + +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN V P G KLSK E
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1117
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1118 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1177
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1178 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCE 1236
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+AD TKP+K E F K+R +LGV + S
Sbjct: 1297 HYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSS 1345
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] gi|11278364|pir||T47925
copia-type polyprotein - Arabidopsis thaliana
Length = 1352
Score = 1166 bits (3016), Expect = 0.0
Identities = 617/1369 (45%), Positives = 868/1369 (63%), Gaps = 66/1369 (4%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K +Y E + +EE++LLMA + + K+ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGV ERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DEPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F +A++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 878 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKK LYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ + +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F + DSN V P G KLSK E
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEE 1117
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1118 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1177
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1178 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCE 1236
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+AD TKP+K E F K+R +LGV + S
Sbjct: 1297 HYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSS 1345
>gb|AAG50765.1| copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321254|gb|AAG50698.1| copia-type polyprotein,
putative [Arabidopsis thaliana] gi|25301687|pir||F96614
probable copia-type polyprotein T18I24.5 [imported] -
Arabidopsis thaliana
Length = 1320
Score = 1153 bits (2982), Expect = 0.0
Identities = 614/1369 (44%), Positives = 858/1369 (61%), Gaps = 98/1369 (7%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+E+K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDQESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL GKQ + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
DR EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++RSKLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEED--YNFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE E
Sbjct: 774 DKPE------------PTREEPPSEEPTTPPTSPTSSQIEEKCE---------------- 805
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 806 --------------------PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 845
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY EVFAPVARL+T+R+I+ +AAQ
Sbjct: 846 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQ 905
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKKALYGLKQA RAW +R
Sbjct: 906 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTR 965
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 966 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1025
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN V P G KLSK E
Sbjct: 1026 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1085
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
G VD T FK +VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1086 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1145
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y S+ KL+ + DSD+ GD+DDR+STS FVF +G +W SKKQ +V LST E
Sbjct: 1146 FGLHYST-TSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCE 1204
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA C C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1205 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1264
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1265 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1313
>gb|AAF16534.1| T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 1100 bits (2845), Expect = 0.0
Identities = 594/1340 (44%), Positives = 838/1340 (62%), Gaps = 69/1340 (5%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLQMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQED------RSSRGRGRGAPRG 232
DL ++I++L GSL +E++ + ++ E VL ++ +E+ R G RG RG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMRITKEENGQSYQRRGGGEVRGRGRG 239
Query: 233 GRGRGRGRQSLNKEVIECYKCHRLGHFQYECPDWEKKVNYAELE-EEEELLLMAYVEPHQ 291
G G GRG + + ++ +E+K NY E + +EE++LLMA + +
Sbjct: 240 GYGNGRGWRPHEDNTNQRAPSNK---------KFEEKANYVEEKIQEEDMLLMASYKKDE 290
Query: 292 TKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQL-NGIT 350
++ WYLDSG SNHM G K F +L+E V LG++++M V KG+I ++L NG
Sbjct: 291 QEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDH 350
Query: 351 QVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLL 410
Q IS+VYYIP +K N+LS+GQL EKG I ++D + +I + MS N MF L
Sbjct: 351 QFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVL- 409
Query: 411 ASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTT 470
++ + CL + ++E+ + H RFGHLN GL LS K+MV GLP + P ++C
Sbjct: 410 -NIRNDIAQCL--KMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEG 466
Query: 471 CLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYF 530
CL GKQ + PK S RA K L+L+H+D+CGPIKP
Sbjct: 467 CLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK----------------------- 503
Query: 531 LHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYT 590
EKSE F FK++KA VEKE G I +R+DR EFTS EF ++C GI RQLT +
Sbjct: 504 SLEKSEVFKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRS 563
Query: 591 P*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAW 650
P QNGVAERKNRTI+ + RSML K++PK W+EAV V++ NR P +V KTP+EAW
Sbjct: 564 PQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAW 623
Query: 651 SGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIV 710
SG KP V + R+F +AH HVPD++RSKLDDKS+K +F+G + SK ++LY P +KK I+
Sbjct: 624 SGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTII 683
Query: 711 SKDVVFEEEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPES 770
S+++VF+EE WDW EE+ + EED+ E S + P S
Sbjct: 684 SRNIVFDEEGEWDWNSNEED--YNFFPHFEEDEPEPTR--------EEPPSEEPTTRPTS 733
Query: 771 LPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAVK 830
L + I + E R R R + YE E +ENL + E +P+ F EA++
Sbjct: 734 LTSSQIEESSSE----RTPRFRSIQEL---YEVTEN-QENLTLFCLFAECEPMDFQEAIE 785
Query: 831 NKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKG 890
K WR+AM EI+SI++N +WELT LP G K IGVKWV+K K N G+VE++KARLVAKG
Sbjct: 786 KKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKG 845
Query: 891 YAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPK 950
Y+QR +DY EVFAPVARL+T+R+I+ +AAQ W++ Q+D K AFL+G+ +EEV+++QP+
Sbjct: 846 YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQ 905
Query: 951 GFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRIL 1010
G+I KGEEDKV RLKKALYGLKQA RAW +RI+ YF +DF +CP EH L+ K + IL
Sbjct: 906 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDIL 965
Query: 1011 IVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRY 1070
I LYVDDLIFTGN+ M +EFK M EF+M+D+G M Y+LG+EVKQ + IFI Y
Sbjct: 966 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGY 1025
Query: 1071 ARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYG 1130
A++VL +F M DSN V P G KLSK E G VD T FK +VGSL YLT TRPD++Y
Sbjct: 1026 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1085
Query: 1131 VSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDLDDR 1190
V ++SR+M PT +H+ AAKRILRY+KGT + G+ Y S+ KL+ + DSD+ D+DDR
Sbjct: 1086 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST-TSDYKLVGYSDSDWGRDVDDR 1144
Query: 1191 RSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKT 1250
+STS FVF +G +W SKKQ +V LST EAEY+AA C C +WL +L+++ + ++
Sbjct: 1145 KSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEE 1204
Query: 1251 STEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTK 1310
T+I DN I L+KNPVFH +SKHID R+H++R+ V+ ++L Y + DQ+ADI TK
Sbjct: 1205 PTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTK 1264
Query: 1311 PIKLEQFEKLRGMLGVTEVS 1330
P+K E F K+R +LGV + S
Sbjct: 1265 PLKREDFIKMRSLLGVAKSS 1284
>gb|AAT38758.1| putative gag-pol polyprotein [Solanum demissum]
Length = 1333
Score = 1082 bits (2799), Expect = 0.0
Identities = 597/1345 (44%), Positives = 836/1345 (61%), Gaps = 55/1345 (4%)
Query: 9 QPAIPKFDG-HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLK 67
QP IP F G +Y +WS+ M+ +S+E+W +V+ GIP E + E + +
Sbjct: 11 QPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETGIP----------EGNANQMREHRKR 60
Query: 68 DLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAM 127
D K + QA+ EI I ETSK+ W +KQ+Y G KV +LQ +RR+F+ L M
Sbjct: 61 DSKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFM 120
Query: 128 KEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSIL 187
E E V +L RT +VN+M+S GE +++ VVSK+LRSLT+KF +VV +IEES DLS
Sbjct: 121 NENESVQGYLSRTSAIVNRMRSYGEKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTY 180
Query: 188 SIDELHGSLLVHEQRMQGHQEE----------EHVLKVAQEDRSSRGRGRGAPRG-GRG- 235
S DEL SLL HE R+ +E+ E K E+ + RG GRG RG GRG
Sbjct: 181 SFDELMSSLLAHEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGG 240
Query: 236 RGRGRQSLN-----KEVIECYKCHRLGHFQYEC----PDWEKKVNYAELEEEEELLLMAY 286
GRGR + K I+C C + GH + +C D +K N+ + EEE L MA
Sbjct: 241 SGRGRNQVGEFRQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMAS 300
Query: 287 VEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQ- 345
+ ++ VW++DSGCSNHM +K F DL+E V+LG+D ++ + KG++ ++
Sbjct: 301 SQITESANA-VWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKT 359
Query: 346 LNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRG-VIMQTNMSGN 404
+ G + + DV Y+P L +NLLS+GQL G +++ D C + G I + M+ N
Sbjct: 360 VQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQN 419
Query: 405 IMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESP 464
MF L S ++ ++ + E ++ H R+GHLN L+ L K MV+GLP+++
Sbjct: 420 KMFPLDISNVGNSALVVK----EKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKEL 475
Query: 465 EKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTR 524
+ +C C+ GKQ R+ P WRA+ L+LVH+D+CGP+K RY L F DD++R
Sbjct: 476 D-LCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSR 534
Query: 525 KTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQ 584
+WVYFL KSE F FK++KA VE + G I LRTDR EF SN+F+ FC GI R+
Sbjct: 535 FSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRE 594
Query: 585 LTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENK 644
LT YTP QNGVAERKNRT++ + RS L K +P FW EAV V+ N P V N
Sbjct: 595 LTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNT 654
Query: 645 TPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPV 704
TP EAW+G+KP V + RIF C+A+ V SKLD+KS KC+F+G S +SKA+RLY P+
Sbjct: 655 TPLEAWNGKKPRVSHLRIFGCIAYALV--NFHSKLDEKSTKCIFVGYSLQSKAYRLYNPI 712
Query: 705 SKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSS 764
S K+I+S++VVF E+ SW++ + +L EE + N N S SSS S
Sbjct: 713 SGKVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTDEESAVDFGNSP----NSSPVSSSVS 768
Query: 765 NSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVS 824
+ + S P ++ E + R RE++ +++ N + + +DP+
Sbjct: 769 SPIAPSTTVAPDESSVEPIPLRRSTREKKPNPKYSN-------TVNTSCQFALLVSDPIC 821
Query: 825 FGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKA 884
+ EAV+ +W++AM EI++IERN +WEL P+G IG+KWVF+TK N DG ++K KA
Sbjct: 822 YEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKA 881
Query: 885 RLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEV 944
RLVAKGY+Q+ VD+ E F+PVAR +T+RV+L +AAQ V+Q DVKSAFL+G+L+EEV
Sbjct: 882 RLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEV 941
Query: 945 FVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKS 1004
+V QP+GF+ G E+KVY+L+KALYGLKQA RAWYS+I+++F F R +E L+ K
Sbjct: 942 YVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKK 1001
Query: 1005 KG-GRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGI 1063
+G L+V LYVDD+I+ G+ + + ++FKS+MM F+MSDLG +KYFLG+EV Q DGI
Sbjct: 1002 QGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGI 1061
Query: 1064 FIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVT 1123
FI ++YA D+L +F M + P KL + +G + + LF+ +VG L YLT T
Sbjct: 1062 FISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHT 1121
Query: 1124 RPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDY 1183
RPD+ + VS++SRF+ SPT H+ AAKR+LRY+ GTTD GI+Y K N +L+ F DSDY
Sbjct: 1122 RPDIAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSK-APNFRLVGFTDSDY 1180
Query: 1184 AGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEK 1243
AG LDDR+STS F GSGVV+WSSKKQ VALST+EAEY AA+L A Q +WL ++LE
Sbjct: 1181 AGCLDDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLED 1240
Query: 1244 IGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQ 1303
E+K STEI D+ I ++KNP FHG++KHIDV++HF+R LV DG I L +C++ +Q
Sbjct: 1241 FSYEQKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQ 1300
Query: 1304 IADIMTKPIKLEQFEKLRGMLGVTE 1328
ADI TK + + E R LGV +
Sbjct: 1301 AADIFTKSLPQAKHEYFRLQLGVCD 1325
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
gi|11278363|pir||T49313 copia-type reverse
transcriptase-like protein - Arabidopsis thaliana
Length = 1272
Score = 1044 bits (2700), Expect = 0.0
Identities = 573/1369 (41%), Positives = 814/1369 (58%), Gaps = 146/1369 (10%)
Query: 2 SDSEKFEQPAIPKFDGHYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV 61
S++ F+ P + K +YD WS+ M+ L + ++W +V++G E + S+ Q +
Sbjct: 3 SNNVPFQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGS-LSQTQKDGL 59
Query: 62 EEAKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRRE 121
+++ +D K ++Q + + E +++ ++KE W ++ Y G+ +VK+ +LQ +R E
Sbjct: 60 RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119
Query: 122 FDLLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEES 181
F+ L MKEGE V + R L V N +K NGE ++ ++ K+LRSL KF ++V IEE+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 182 NDLSILSIDELHGSLLVHEQRMQGHQE-EEHVL--KVAQEDRSS----------RGRGRG 228
DL ++I++L GSL +E++ + ++ E VL ++ +E+ RGRGRG
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 229 APRGGRG----------------RGRGR----QSLNKEVIECYKCHRLGHFQYECP---- 264
GRG RGRG+ +K ++CY C + GH+ EC
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 265 -DWEKKVNYAELE-EEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+++K NY E + +EE++LLMA + + ++ WYLDSG SNHM G K F +L+E
Sbjct: 300 KKFKEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILI 381
V LG++++M V KG+I ++L NG Q IS+VYYIP +K N+LS+GQL EKG I +
Sbjct: 360 RGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRL 419
Query: 382 QDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHL 441
+D + +I + MS N MF L ++ + CL+ ++E+ + H RFGHL
Sbjct: 420 KDNNLSIRDKESNLITKVPMSKNRMFVL--NIRNDIAQCLKM--CYKEESWLWHLRFGHL 475
Query: 442 NHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDIC 501
N GL LS K+MV GLP + P ++C CL G Q + PK S RA K L+L+H+D+C
Sbjct: 476 NFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVC 535
Query: 502 GPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRT 561
GPIKP Y L FIDD +RKTWVYFL EKSE F FK++KA VEKE G I +R+
Sbjct: 536 GPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRS 595
Query: 562 DRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVF 621
D EFTS EF ++C GI RQLT +P QNGVAERKNRTI+ + RSML K++PK
Sbjct: 596 DSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKEL 655
Query: 622 WSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
W+EAV V++ NR P +V KTP+EAWSG KP V + R+F +AH HVPD++R+KLDD
Sbjct: 656 WAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDD 715
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEE 741
KS+K +F+G + SK ++LY P +KK I+S+++VF+EE WDW EE+ + EE
Sbjct: 716 KSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDY--NFFPHFEE 773
Query: 742 DQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
D+ E + P + P P S+ EE R R R + Y
Sbjct: 774 DKPEPTR------------EEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL---Y 818
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
E E +ENL + E +P+ F EA++ K WR+AM EI+SI++N +WELT LP G K
Sbjct: 819 EVTEN-QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHK 877
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+K K N G+VE++KARLVAKGY+QR +DY E+FAPVARL+T+R+I+ +AAQ
Sbjct: 878 AIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQ 937
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W++ Q+DVKSAFL+G+L+EEV+++QP+G+I KGEEDKV RLKK LYGLKQA RAW +R
Sbjct: 938 NKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTR 997
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF +DF +CP EH L+ K + ILI LYVDDLIFTGN+ M +EFK M EF+
Sbjct: 998 IDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1057
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
M+D+G M Y+LG+EVKQ +GIFI YA++VL +F M DSN
Sbjct: 1058 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSN----------------- 1100
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
+VGSL YLT TRPD++Y V ++SR+M PT +H+ AAKRILRY+KGT +
Sbjct: 1101 ---------PSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1151
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
G+ Y SDY
Sbjct: 1152 FGLHYS-----------TTSDY-------------------------------------- 1162
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
L C +WL +L+++ + ++ T+I DN I L+KNPVFH +SKHID R+
Sbjct: 1163 ------KLVVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1216
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEVS 1330
H++R+ V+ ++L Y + DQ+ADI TKP+K E F K+R +LGV + S
Sbjct: 1217 HYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1265
>gb|AAP46257.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|50919599|ref|XP_470160.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1335
Score = 977 bits (2525), Expect = 0.0
Identities = 554/1365 (40%), Positives = 790/1365 (57%), Gaps = 82/1365 (6%)
Query: 9 QPAIPKFDG-HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLK 67
Q +P F G +YD WS+ M L S+ +W +V+ G G T + EQ K++ E ++
Sbjct: 3 QSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGET-LTAEQKKSLAEDRMS 61
Query: 68 DLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAM 127
D K + Q + + I+ + SKE W+ +K+++ GS KV +LQ +RR+F L M
Sbjct: 62 DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNLLM 121
Query: 128 KEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSIL 187
KE EKV + R + +VN+M+ GE + VV KIL SL K+ Y+V + EES DLS
Sbjct: 122 KESEKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSKD 181
Query: 188 SIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRG----RGAPRGGRG-------- 235
S++ L QR E K++ ++SR RG G P RG
Sbjct: 182 SLESHEERKL---QREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRGYFQKNGFS 238
Query: 236 ---------RGRGRQSLNK----------------EVIECYKCHRLGHFQYECPDWE-KK 269
R +G S N + + C KC R GH C E +
Sbjct: 239 RQKEDGQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTREINR 298
Query: 270 VNYA-ELEEEEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKL 328
N++ E E+ EE++ + Q +K +VW +DSGC+NHM + F +++ + + +
Sbjct: 299 ANFSQEKEKSEEMVFSCHTA--QEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 356
Query: 329 GNDTRMAVVAKGSIRMQLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKV 388
GN + KG++ +Q + I DV +P+LK NLLSIGQL E G A+ +D +CK+
Sbjct: 357 GNGSIAQSEGKGTVAVQTADGPKFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKI 416
Query: 389 FHPMRG-VIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLR 447
++ + NM N F L M + L++E + + H R GHLN++ L+
Sbjct: 417 LDRKNNRLVAKINMEKNRNFLL--RMNHTTQMALRSEV---DISDLWHKRMGHLNYRALK 471
Query: 448 TLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPS 507
L K MV GLP + C C+ GKQ R P WRAS L+LVH+DI G +
Sbjct: 472 LLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTI 531
Query: 508 WNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEF 567
Y ++FIDD+TR WVYFL EKS A FK++KA VE + I LR+D+ E+
Sbjct: 532 SEGGNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREY 591
Query: 568 TSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVR 627
S EF+++C + GI RQLT Y+ QNGVAERKNRTI ++ SML +K +PK FW+EAV
Sbjct: 592 ISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVN 651
Query: 628 WCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCV 687
V+I NR P AV N+TP EAW G+KPV+ + R+F C+ + VP Q+R K D+KS +C+
Sbjct: 652 TAVYILNRSPTKAVTNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCI 711
Query: 688 FLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEE----IKLDILECGEEDQ 743
F+G +D K +RLY KKII+S+D +F+E +W+W E + + G+
Sbjct: 712 FVGYADGIKGYRLYNLEKKKIIISRDAIFDESATWNWKSPEASSTPLLPTTTITLGQPHM 771
Query: 744 N--EEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADY 801
+ E T SS SSSS S S +E +TPE R R +
Sbjct: 772 HGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPR----RVRSMVELLEST 827
Query: 802 ETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVK 861
+ G E++ V E P SF EA K+ W AM EI IE+N +WEL P+ +
Sbjct: 828 SQQRGSEQHEFCNYSVVE--PQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDRE 885
Query: 862 PIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQ 921
IGVKWV+KTKLN DG V+K+KARLVAKG+ Q+ +DY E +APVARL+TIR I+ +AAQ
Sbjct: 886 VIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQ 945
Query: 922 FSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSR 981
W+++QLDVKSAFL+G L EE++V+QP+GF +G E+KV+RLKKALYGLKQA RAWYS+
Sbjct: 946 KRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQ 1005
Query: 982 IEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFD 1041
I+ YF+++ F + SE L+ G ILIVSLYVDDLI+TGN M +FK MM ++
Sbjct: 1006 IDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYE 1065
Query: 1042 MSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEG 1101
MSDLG + YFLG+EV Q +GIFI R+YA ++L +F M + +V P +P K +G
Sbjct: 1066 MSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDG 1125
Query: 1102 GVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTD 1161
+ D T+++ +VGSL+YLT TRPD+M+ SL+SR+MSSP+ ++ AAKR+LRY+KGT D
Sbjct: 1126 ADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAD 1185
Query: 1162 LGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTE 1221
GI+YK KL+ + DSD+AG LDD +STS + F LGS E
Sbjct: 1186 YGIWYKP-VKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGS-----------------AE 1227
Query: 1222 AEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRF 1281
AEY+AA+ Q VWL R++E +G ++ T I CD+ I +S+NPV H ++KHI +++
Sbjct: 1228 AEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKY 1287
Query: 1282 HFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
H++R+ V+ +KL +C + +Q+ADI TK + E+F + R ++GV
Sbjct: 1288 HYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGV 1332
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 937 bits (2423), Expect = 0.0
Identities = 509/1352 (37%), Positives = 785/1352 (57%), Gaps = 75/1352 (5%)
Query: 9 QPAIPKFDGH-YDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAV----EE 63
Q IP F+G Y +W + M L+++++W +++ G+ T+ +S E A+ ++
Sbjct: 6 QQVIPIFNGESYGFWKIKMITILKTRKLWDVIENGV------TSNSSPETSPALTRERDD 59
Query: 64 AKLKDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFD 123
+KD+ L A+ I I ++ E WN+++ ++ GSS+VK LQ +RRE++
Sbjct: 60 QVMKDMMALQILQSAVSDSIFPRIAPASSATEAWNALEMEFQGSSQVKMINLQTLRREYE 119
Query: 124 LLAMKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESND 183
L M+EGE ++ F + + + N+++ +GE VV KIL S+ +F+ +V +E++ D
Sbjct: 120 NLKMEEGETINDFTTKLINLSNQLRVHGEEKSDYQVVQKILISVPQQFDSIVGVLEQTKD 179
Query: 184 LSILSIDELHGSLLVHEQRMQGHQEEEHVLKVAQEDRSSRGRGRGAPRGGRGRGR----- 238
LS LS+ EL G+L HE+R+ +EDR + G G G RG +
Sbjct: 180 LSTLSVTELIGTLKAHERRLN-----------LREDRINEGAFNGEKLGSRGENKQNKIR 228
Query: 239 -GRQSL--------NKEVIE-------------------CYKCHRLGHFQYECPDWEKKV 270
G+ ++ N ++ CY C + GH +C + +
Sbjct: 229 HGKTNMWCGVCKRNNHNEVDCFRKKSESISQRGGSYERRCYVCDKQGHIARDCKLRKGER 288
Query: 271 NYAELEEEEE------LLLMAYVEPHQ--TKKQEVWYLDSGCSNHMKGNKEWFLDLEEDF 322
+ +EE E+ +L + VE + T +E W +DSGC+NHM + F+ L+
Sbjct: 289 AHLSIEESEDEKEDECHMLFSAVEEKEISTIGEETWLVDSGCTNHMSKDVRHFIALDRSK 348
Query: 323 SRTVKLGNDTRMAVVAKGSIRMQLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQ 382
+++GN ++ KG IR+ N VI DV Y+PEL NLLS+ Q+ G ++ +
Sbjct: 349 KIIIRIGNGGKVVSEGKGDIRVSTNKGDHVIKDVLYVPELARNLLSVSQMISNGYRVIFE 408
Query: 383 DGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLN 442
D C + I+ M + R A +++ + H RFGH+N
Sbjct: 409 DNKCVIQDLKGRKILDIKMKDRSFPII---WKKSREETYMAFEEKEEQTDLWHKRFGHVN 465
Query: 443 HKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICG 502
+ + T+ K+V LP E + IC C GKQ R PK+S +K L+L+HSD+CG
Sbjct: 466 YDKIETMQTLKIVEKLPKFEVIKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCG 525
Query: 503 PIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTD 562
P++ + RY L+FIDD +R TWVYFL KSE KFK +K VE + + I LRTD
Sbjct: 526 PMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTD 585
Query: 563 RVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFW 622
EF S EF + C+ GI+ ++TT Y+P QNGVAER+NRT++ + RSM+ EK++ FW
Sbjct: 586 GGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSNKFW 645
Query: 623 SEAVRWCVHIQNRCPIVAVE-NKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDD 681
+EA+ ++QNR P ++E TP E WSG+KP V + ++F CV ++H+PD++R KLD
Sbjct: 646 AEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDT 705
Query: 682 KSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDWG-RIEEEIKLDILECGE 740
K+K+ +F+G S+ESK +R+++ +KI VSKDV F+E+++W + E + L +++
Sbjct: 706 KAKQGIFVGYSNESKGYRVFLLNEEKIEVSKDVTFDEKKTWSHDEKGERKAILSLVKI-- 763
Query: 741 EDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFAD 800
++E+ G DLN S++ N L + + + N+ EE E R R + D
Sbjct: 764 --NSQEQGGGNDLNAHIDQVSNAFNQL--HISSRGVQNSHEEGEESVGPRGFRSINNLMD 819
Query: 801 YETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGV 860
E ++ M ++ +P + EA+K++KW +AM E+ IE+N++WE+ PK
Sbjct: 820 QTNEVEGEALIHEMCLMMAEEPQALEEAMKDEKWIEAMREELRMIEKNKTWEVVARPKDK 879
Query: 861 KPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAA 920
I VKW+F+ K + G+ K KARLVA+G+ Q + VDY E FAPV+R DTIR I+ +AA
Sbjct: 880 NVISVKWIFRLKTDASGEAIKRKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAA 939
Query: 921 QFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYS 980
Q W++FQ+DVKSAFL+G+L+EEV+++QP GFI + EE KV +L KALYGLKQA RAWY
Sbjct: 940 QQGWKLFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRAWYG 999
Query: 981 RIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEF 1040
RI+ YF++ FER ++ + K IL+VSLYVDD+I TG++ + FK M EF
Sbjct: 1000 RIDGYFIKNGFERSINDAAFYVKKTSKEILVVSLYVDDIIVTGSNVKEIERFKEEMKNEF 1059
Query: 1041 DMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDE 1100
+M+DLG++ YFLG+EV Q +GIF+ YA+ +L +F M++ +V P P K+ +
Sbjct: 1060 EMTDLGELSYFLGMEVNQDDEGIFLSQENYAKKLLKKFGMQECKSVSTPLTPHGKIEEVL 1119
Query: 1101 GGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTT 1160
D T+++ ++G ++YL +RPD+MY S +SR+M SP H AKR+LRY+KGT
Sbjct: 1120 SEKLEDVTMYRSMIGGMLYLCASRPDIMYASSYLSRYMRSPLKQHLQEAKRVLRYVKGTL 1179
Query: 1161 DLGIFYKKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTT 1220
GI +K+ +L+ F DSD+AG ++D++STS +VF +GSG W+S KQ VA ST
Sbjct: 1180 TYGIHFKR-VEKPELVGFSDSDWAGSVEDKKSTSGYVFTIGSGAFCWNSSKQKTVAQSTA 1238
Query: 1221 EAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVR 1280
EAEYIA A Q +WL R++ +IG + + I CDN I + KNPV H ++KHID++
Sbjct: 1239 EAEYIAVCSAANQAIWLQRLVNEIGFKAEKGIRIFCDNKSAIAIGKNPVQHRRTKHIDIK 1298
Query: 1281 FHFLRDLVNDGVIKLSYCNSQDQIADIMTKPI 1312
+HF+R+ +G IKL YC + QIADI+TKP+
Sbjct: 1299 YHFVREAQQNGKIKLEYCPGELQIADILTKPL 1330
>gb|AAD17409.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|25301699|pir||F84531 probable retroelement pol
polyprotein [imported] - Arabidopsis thaliana
Length = 1347
Score = 936 bits (2419), Expect = 0.0
Identities = 508/1358 (37%), Positives = 795/1358 (58%), Gaps = 67/1358 (4%)
Query: 12 IPKFDGH-YDYWSMTMENFLRSKEMWSLVDEGIPV--LETGTTPASEEQMKAVEEAKLKD 68
IP FDG YD+WS+ M R++++WS+V+EG+PV ++ TP + EEA D
Sbjct: 9 IPIFDGEKYDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTND 68
Query: 69 LKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMK 128
L A+ +I I +SKE W+ +K +Y GS +V+ +LQ +RRE++ L M
Sbjct: 69 TMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMY 128
Query: 129 EGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILS 188
+ + + +F + +++ ++ +GE ++ ++ KIL SL +KF+ +V +E++ DL L+
Sbjct: 129 DNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALT 188
Query: 189 IDELHGSLLVHEQRMQGHQE--EEHVLKVAQEDRSSRGR----GRGAPRGGRGRGRGRQS 242
+ EL G L E R+ +E +E V + R S + + + G + S
Sbjct: 189 MSELLGILKAQEARVTAREESTKEGAFYVRSKGRESGFKQDNTNNRVNQDKKWCGFHKSS 248
Query: 243 LNKEV------------------IECYKCHRLGHFQYECPDWEKKVNYAELEEEE----E 280
+ E I+CYKC ++GH+ EC K+ + LEEE+
Sbjct: 249 KHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHYANECRSKNKERAHVTLEEEDVNEDH 308
Query: 281 LLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKG 340
+L A E T +++VW +DSGC+NHM + +F ++ + +++ N + KG
Sbjct: 309 MLFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKG 368
Query: 341 SIRMQLNGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTN 400
I + ++I +V+ +P L+ NLLS+ Q+ G + QD C + IM
Sbjct: 369 DITVMTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMNIE 428
Query: 401 MSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPS 460
M+ L+S+ +A + + H R GH+++K L+ + K++V GLP
Sbjct: 429 MTDKSFKIKLSSVEE------EAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPR 482
Query: 461 LESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFID 520
+ ++ C C GKQ R+ PK S + ++L++VH+D+CGP++ RY + F+D
Sbjct: 483 FKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLD 542
Query: 521 DHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQG 580
D+T WVYFL +KSE F FK++KA VEK+ I LR V FC +G
Sbjct: 543 DYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRPMEV----------FCEDEG 592
Query: 581 INRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVA 640
INRQ+T Y+P QNG AERKNR+++ + RSML E+ +P W+EAV ++QNR P A
Sbjct: 593 INRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKA 652
Query: 641 VENK-TPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWR 699
+E+ TP E W G KP V + RIF + +VH+PDQ+R KLD K+K + +G S+++K +R
Sbjct: 653 IEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYR 712
Query: 700 LYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGE--EDQNEEENGRTDL---- 753
+++ +K+ VS+DVVF+E++ WDW + EE K ++ + E ++++E DL
Sbjct: 713 VFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQID 772
Query: 754 ---NNLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEEN 810
NN +SS S S +P++ + + E+ P D E +G+E
Sbjct: 773 DHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEK-APRMEND-EAAQGIEAC 830
Query: 811 LNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFK 870
L V +P ++ EA +K+W +AM+ EI+ IE+N++W+L P+ I VKW++K
Sbjct: 831 L-----VANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYK 885
Query: 871 TKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLD 930
K + G+ K KARLVA+G++Q + +DY E FAPV+R DTIR +L AAQ W ++Q+D
Sbjct: 886 IKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMD 945
Query: 931 VKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVRED 990
VKSAFL+GEL+EEV+V QP GF+ +G+E+KV RL KALYGLKQA RAWY RI++YF++
Sbjct: 946 VKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNG 1005
Query: 991 FERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKY 1050
F R ++ L++K KG +LIVSLYVDDLI TGN+ + + FK +M EF+M+DLG + Y
Sbjct: 1006 FARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNY 1065
Query: 1051 FLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVR--VDET 1108
FLG+EV Q GIF+ +YA ++ +F M++S +V P P K EG + D T
Sbjct: 1066 FLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPT 1125
Query: 1109 LFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKK 1168
++++VG L+YL +RPD+MY S +SR+MSSP++ H+ AKR+LRY+KGT++ G+ +
Sbjct: 1126 KYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLF-T 1184
Query: 1169 GGSNMKLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAA 1228
+L+ + DSD+ G L+D++ST+ +VF LG + W S KQ VA ST EAEYIA
Sbjct: 1185 SKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVC 1244
Query: 1229 LCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLV 1288
Q +WL R+ E G++ K I+CDN I + +NPV H ++KHI++++HF+R+
Sbjct: 1245 AATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAE 1304
Query: 1289 NDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
+ G+I+L YC +DQ+AD++TK + + +FE LR LGV
Sbjct: 1305 HKGLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
>ref|XP_474043.1| OSJNBb0034I13.10 [Oryza sativa (japonica cultivar-group)]
gi|21741247|emb|CAD41731.1| OSJNBb0034I13.10 [Oryza
sativa (japonica cultivar-group)]
Length = 1425
Score = 895 bits (2312), Expect = 0.0
Identities = 519/1394 (37%), Positives = 767/1394 (54%), Gaps = 119/1394 (8%)
Query: 18 HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQ 77
+Y W++ M L+++ +W+ +D G +D + + Q
Sbjct: 60 NYPDWALLMRVNLQAQGLWTAIDPGYAEFR-------------------EDRAALSAILQ 100
Query: 78 AIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFL 137
A+ RE+L + +T+K W+++K G +V+ + Q RR+F+ + KE E + F
Sbjct: 101 AVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMRFKERETPEEFA 160
Query: 138 GRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILSIDELHGSLL 197
R VV ++ G ME V K+LR + K+ V S+E+ D+ ++++EL G L
Sbjct: 161 MRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLS 220
Query: 198 VHEQRMQGHQ----------EEEHVLKVAQEDRSSRG----RGRGAPRGGRGRGR-GRQS 242
+ + EE+ +V Q ++ G +GRGAP RG+ G
Sbjct: 221 TVDSYSDDEEGSNGGKLYLTEEQWQARVKQREQEGSGNSGNKGRGAPGAQNHRGKPGGSP 280
Query: 243 LNKEV------------IECYKCHRLGHFQYEC--PDWEKK--VNYAELEEEEELLLMAY 286
KE ++C+ C GH+ +C P +++ N + EEE LLMA+
Sbjct: 281 KGKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRRGEANLVQAAEEEPTLLMAH 340
Query: 287 V------------------EPHQTKKQEV--------------WYLDSGCSNHMKGNKEW 314
V E H T+K+ + W+LD+G +NHM G +
Sbjct: 341 VVGVSLAGEATLGRTPSGQEVHLTEKKVILDHEDGGEEEVTGDWFLDTGATNHMTGVRSA 400
Query: 315 FLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQ 373
F +L+ TVK G+ + + + +G++ + NG + + VYYIP+L+ N++S+G+L
Sbjct: 401 FAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDAVYYIPKLRKNIISVGRLD 460
Query: 374 EKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM 433
+G I G C + P ++ + N ++ L +A VC+ A A
Sbjct: 461 ARGYDAHIWGGVCTLRDPNGLLLAKVKRDINYLYILKLHIA--NPVCMAASGGDT--AWR 516
Query: 434 *HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQL 493
H RFGHLN + LR L+ MV GLP+++ +++C CL GKQ R P P+ + +RA + L
Sbjct: 517 WHARFGHLNFQSLRRLAQGNMVRGLPTIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEAL 576
Query: 494 QLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIG 553
+LVH D+CGPI P+ ++Y L +DD +R W+ L K EA K+++AGVE E G
Sbjct: 577 ELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESG 636
Query: 554 AHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLN 613
+ LRTDR EFTS EF ++C +G+ R+LT Y+P QN V ER+N+T++ RSML
Sbjct: 637 RKLRALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLK 696
Query: 614 EKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPD 673
+P FW EAV V++ NR P A++ TP EAW G +P V + R+F CV +V
Sbjct: 697 AAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVK 756
Query: 674 QRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDW------GRI 727
KLDD+ + VF+G SKA+R+Y PV++++ VS+DVVF+E +W W
Sbjct: 757 PNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDETATWAWRDPEDAATE 816
Query: 728 EEEIKLD---------ILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPN----- 773
EEE +D + + GE+ + G + + S+ S P PN
Sbjct: 817 EEEFTVDFFVSPVAPSVADAGEQTGTPVQAGVSPV-------STGVLSSPPRAPNGEFCT 869
Query: 774 EPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAVKNKK 833
P S TPE +G VR RRV + T L+ + + ++ +P SF EA K++
Sbjct: 870 PPTSVTPE--TDGGPVRYRRVQDILST--TEPVLDFDYSDQCLIATEEPTSFVEAEKHEC 925
Query: 834 WRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQ 893
WR AM E+ S+E NQ+W L LP G K IG+KWV+K K + G + K KARLVAKGY Q
Sbjct: 926 WRRAMVEELRSVEENQTWSLAELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQ 985
Query: 894 RHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFI 953
+ VD+ EVFAPVAR++T+R+++ +AAQ WE+ +DVKSAFL+GEL+EEV+V QP GF
Sbjct: 986 QQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFD 1045
Query: 954 RKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVS 1013
K KV +L+KALYGL+QA RAW ++++ + F + +E ++ + G LIV
Sbjct: 1046 DKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYVRGVGDSKLIVG 1105
Query: 1014 LYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARD 1073
+YVDDLI TG+ + D FK M F+MSDLG + Y+LG+EV Q +GIF+ YA
Sbjct: 1106 VYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEVVQKGEGIFLSQSAYAGK 1165
Query: 1074 VLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSL 1133
+L + M N + P KLSK+ G VD T ++ +VGSL YL TRPDL Y V
Sbjct: 1166 ILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTRPDLAYSVGY 1225
Query: 1134 ISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFY-KKGGSNMKLMAFPDSDYAGDLDDRRS 1192
+SRFM PT HW A K ILRY+ GT G +Y ++ N KL+ F DSD AGDLDDR+S
Sbjct: 1226 VSRFMEKPTSEHWAAVKHILRYISGTIKTGCWYGREEVGNAKLVGFSDSDMAGDLDDRKS 1285
Query: 1193 TSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTST 1252
T+ +F G ++SW S+KQ VVALS+ EAEYIAA ACQ +WL R++ ++ E T
Sbjct: 1286 TTGVLFRYGGSLISWQSQKQKVVALSSCEAEYIAATTAACQGIWLSRLIAELLDAEPGQT 1345
Query: 1253 EIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPI 1312
+M DN I L KNPVFH +SKHID R+HF+R+ V I + Y S+DQ+AD++TKP+
Sbjct: 1346 TLMIDNKSAINLCKNPVFHDRSKHIDTRYHFIRECVEKKQIAVEYVCSEDQLADLLTKPV 1405
Query: 1313 KLEQFEKLRGMLGV 1326
+F++LR +G+
Sbjct: 1406 GRVRFKELRRKMGL 1419
>gb|AAP51989.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37530800|ref|NP_919702.1| putative pol polyprotein
[Oryza sativa (japonica cultivar-group)]
gi|21326494|gb|AAM47622.1| Putative pol polyprotein
[Oryza sativa (japonica cultivar-group)]
gi|20514806|gb|AAM23251.1| Putative pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1426
Score = 892 bits (2306), Expect = 0.0
Identities = 510/1389 (36%), Positives = 760/1389 (53%), Gaps = 104/1389 (7%)
Query: 18 HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQ 77
+Y W++ M L+++ +W+ +D G +D + + Q
Sbjct: 60 NYPDWALLMRVNLQAQGLWTAIDPGYAEFR-------------------EDRAALSAILQ 100
Query: 78 AIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFL 137
A+ RE+L + +T+K W+++K G +V+ + + RR+F+ + KE E + F
Sbjct: 101 AVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEKGFRRQFESMRFKERETPEEFA 160
Query: 138 GRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILSIDELHGSLL 197
R VV ++ G ME V K+LR + K+ V S+E+ D+ ++++EL G L
Sbjct: 161 MRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKTMALEELVGRLS 220
Query: 198 VHEQRMQGHQ----------EEEHVLKVAQEDRSSRG----RGRGAPRGGRGRGR-GRQS 242
+ + EE+ +V Q ++ G +GRGAP RG+ G
Sbjct: 221 TVDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGNSGNKGRGAPGTQNHRGKPGGSP 280
Query: 243 LNKEV------------IECYKCHRLGHFQYEC--PDWEKK--VNYAELEEEEELLLMAY 286
KE ++C+ C GH+ +C P +++ N + EEE LLMA+
Sbjct: 281 KGKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRRGEANLVQAAEEEPTLLMAH 340
Query: 287 V------------------EPHQTKKQEV--------------WYLDSGCSNHMKGNKEW 314
V E H T+K+ + W+LD+G +NHM G +
Sbjct: 341 VVGVSLAGEATLGRTPGGQEVHLTEKKVILDHEDGGEEEVTRDWFLDTGATNHMTGVRSA 400
Query: 315 FLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQ 373
F +L+ TVK G+ + + + +G++ + N + + VYYIP+L+ N++S+G+L
Sbjct: 401 FAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRLD 460
Query: 374 EKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM 433
+G I G C + P ++ + N ++ L +A VC+ A A
Sbjct: 461 ARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIA--NPVCMAASGGDM--AWR 516
Query: 434 *HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQL 493
H RFGHLN + LR L+ MV GLP ++ +++C CL GKQ R P P+ + +RA + L
Sbjct: 517 WHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFPEEAKFRAQEAL 576
Query: 494 QLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIG 553
+LVH D+CGPI P+ ++Y L +DD +R W+ L K EA K+++ GVE E G
Sbjct: 577 ELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESG 636
Query: 554 AHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLN 613
+ LRTDR EFTS EF ++C G+ R+LT Y+P QNGV ER+N+T++ RSML
Sbjct: 637 RKLRALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLK 696
Query: 614 EKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPD 673
+P FW EAV V++ NR P A+ TP EAW G +P V + R+F CV +V
Sbjct: 697 AAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVK 756
Query: 674 QRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESWDW------GRI 727
KLDD+ + VF+G SKA+R+Y PV++++ VS+DVVF+E +W W
Sbjct: 757 PNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSRDVVFDEAATWAWRDPETEATE 816
Query: 728 EEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPIS----NTPEEL 783
EEE +D D + G + + +S + P S P P + P +
Sbjct: 817 EEEFTVDFF-VNPVDSVVADLGEQASTPVQGGTYPASTATPPSPPEVPAGVEFCSPPNSV 875
Query: 784 VEGR---VVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSA 840
G +R RRV + T L+ + + ++ +P+S EA + WR AM
Sbjct: 876 TPGTNEGPIRYRRVQDILS--ATEPVLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQE 933
Query: 841 EIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYT 900
E++SIE NQ+W LP G K IG+KWV+K K + G V K KARLVAKGY Q+ +D+
Sbjct: 934 ELKSIEDNQTWSFAELPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFE 993
Query: 901 EVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDK 960
EVFAPVAR++T+R+++ VAA WE+ +DVKSAFL+G+L+EEV+V QP GFI KG+E +
Sbjct: 994 EVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQ 1053
Query: 961 VYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLI 1020
V RLKKALYGLKQA RAW +++ + +F + +E ++ + G LIV +YVDDLI
Sbjct: 1054 VLRLKKALYGLKQAPRAWNAKLHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLI 1113
Query: 1021 FTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDM 1080
+G D FK M +F MSDLG + Y+LG+EV Q DG+F+ YA +L + M
Sbjct: 1114 ISGAQASEIDFFKEEMKKKFRMSDLGLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGM 1173
Query: 1081 RDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSS 1140
N+ + P KL ++ GG VD T+++ VGSL YL TRPDL Y V +SRFM
Sbjct: 1174 EGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEK 1233
Query: 1141 PTMSHWLAAKRILRYLKGTTDLGIFY-KKGGSNMKLMAFPDSDYAGDLDDRRSTSRFVFM 1199
PT HW A K ILRY+ GT D+G ++ ++ ++L+ F DSD AGDLDDR+ST+ ++M
Sbjct: 1234 PTSEHWAAVKHILRYIAGTLDVGCWFGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYM 1293
Query: 1200 LGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNS 1259
LG ++SW S+KQ VVALS+ EAEYIAA ACQ +WL R+L ++ E+ T + DN
Sbjct: 1294 LGDSLISWQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNK 1353
Query: 1260 FTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEK 1319
I L KNPV H +SKHID RFHF+R+ V I + Y ++DQ+ADI+TKP+ +F +
Sbjct: 1354 SAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADILTKPVGRVRFLE 1413
Query: 1320 LRGMLGVTE 1328
LR +G+ +
Sbjct: 1414 LRKKMGLEQ 1422
>gb|AAD32898.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|25301692|pir||H84467 probable retroelement pol
polyprotein [imported] - Arabidopsis thaliana
Length = 1307
Score = 874 bits (2259), Expect = 0.0
Identities = 505/1339 (37%), Positives = 759/1339 (55%), Gaps = 93/1339 (6%)
Query: 26 MENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQAIGREILE 85
ME LR ++W +D G +E K+ + LFQ++ +
Sbjct: 1 MEATLRVHKVWETIDPGSDDME-------------------KNDMARALLFQSVPESTIL 41
Query: 86 TILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFLGRTLIVVN 145
+ +TSK +W ++K + G+ +VK +LQ + EFD L MK+ E +D F+GR +
Sbjct: 42 QVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEIST 101
Query: 146 KMKSNGETMEHSTVVSKILRSLT-SKFNYVVCSIEESNDLSILSIDELHGSLLVHEQRM- 203
K +S GE +E S +V K L+SL K+ +++ ++E+ DL+ +++ G + +E R+
Sbjct: 102 KSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVC 161
Query: 204 --QGHQEEEHVLKVAQED-----RSSRGRGRGAPRG-GRGRGRGRQSLNKEVIECYKCHR 255
EE+ L A + R RGRGRG G GRG G G Q +K + CY+C +
Sbjct: 162 DEDDSPEEQGKLMYANSESSYDTRGGRGRGRGRSSGRGRG-GYGYQQRDKSKVICYRCDK 220
Query: 256 LGHFQYECPD--------WEKKVNYAELEEEEELLL--MAYVEPHQTKKQEV-------W 298
GH+ EC D E++ N + +E E L++ + Y+ K +E W
Sbjct: 221 TGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEACSDNSW 280
Query: 299 YLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRM-QLNGITQVISDVY 357
YLD+G SNHM GN +WF L E + V+ G+D+R+ + KGSI + GI + ++DVY
Sbjct: 281 YLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTDVY 340
Query: 358 YIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKR 417
+IP+LK+N++S+GQ E G + ++D + ++++ S N ++ + + +
Sbjct: 341 FIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKV--DLNVEN 398
Query: 418 SVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQH 477
CLQ EA T+ K++V+G+ ++ ++ C +CL GKQ
Sbjct: 399 VKCLQLEAA---------------------TMVRKELVIGISNIPKEKETCGSCLLGKQA 437
Query: 478 REPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEA 537
R+P PK + +RAS+ L+LVH D+CGPI S + KRYIL IDDHTR W L EKSEA
Sbjct: 438 RQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEA 497
Query: 538 FVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVA 597
F KF+++K VE+E G I RTD+ EF S EF +FC +GINR LT YTP QNGV
Sbjct: 498 FEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVV 557
Query: 598 ERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVV 657
ER+NRT++ + RS+L ++P W EAVR +I NR +++N+TP E + KP V
Sbjct: 558 ERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNV 617
Query: 658 HYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFE 717
+ R+F C+ + + KLDD+SK V+LG SKA+RL P ++KII +
Sbjct: 618 EHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNN---S 674
Query: 718 EEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNE--- 774
+ E+ D I L + E G E ++ T+ N S +S E E
Sbjct: 675 DSETRD---ISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQID 731
Query: 775 -----PISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAV 829
P TP + R R+ P++ DY +E +++ ++P F EA
Sbjct: 732 AEETQPSHATPLPTLR-RSTRQVGKPNYLDDYVLMAEIEGE--QVLLAINDEPWDFKEAN 788
Query: 830 KNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAK 889
K K+WRDA EI SIE+N++W L LP K IG+KWVFK K N DG + K+KARLVAK
Sbjct: 789 KLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAK 848
Query: 890 GYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQP 949
GY QRH +DY EVFA VAR++TIRVI+ +AA WEV LDVK+AFLHGEL+E+V+V QP
Sbjct: 849 GYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQP 908
Query: 950 KGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRI 1009
+GF K E KVY+L KALYGLKQA RAW +++ +F +C E ++ + + ++
Sbjct: 909 EGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKL 968
Query: 1010 LIVSLYVDDLIFTGN--DRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC* 1067
LIV++YVDDL+ TG+ D ++C FK M +F+MSDLG++ Y+LG+EV +GI +
Sbjct: 969 LIVAIYVDDLLVTGSSLDLILC--FKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQ 1026
Query: 1068 RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDL 1127
RYA ++ M + N V P G +L K + + E +++++G L Y+ TRPDL
Sbjct: 1027 ERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTRPDL 1086
Query: 1128 MYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSNMKLMAFPDSDYAGDL 1187
Y V ++SR++ P SH A K++LRYLKGT G++ K+G + L+ + DS ++ DL
Sbjct: 1087 SYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKS-GLVGYSDSSHSADL 1145
Query: 1188 DDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVE 1247
DD +ST+ +F L ++W S+KQ VVALS+ EAE++AA A Q +WL + ++
Sbjct: 1146 DDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGT 1205
Query: 1248 EKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADI 1307
I DN I L+KN VFHG+SKHI R+HF+R+ V + ++++ + +Q ADI
Sbjct: 1206 TSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADI 1265
Query: 1308 MTKPIKLEQFEKLRGMLGV 1326
+TKP+ +F ++R ++GV
Sbjct: 1266 LTKPLGRIKFREMRELVGV 1284
>ref|NP_912850.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1330
Score = 851 bits (2198), Expect = 0.0
Identities = 491/1340 (36%), Positives = 728/1340 (53%), Gaps = 114/1340 (8%)
Query: 67 KDLKVKNYLFQAIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLA 126
+D + + QA+ RE+L + +T+K W+++K G +V+ + Q RR+F+ +
Sbjct: 23 EDWAALSAILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFESMR 82
Query: 127 MKEGEKVDSFLGRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSI 186
KE E + F R VV ++ G ME V K+LR + K+ V S+E+ D+
Sbjct: 83 FKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLDVKT 142
Query: 187 LSIDELHGSLLVHEQRMQGHQ----------EEEHVLKVAQEDRSSRG----RGRGAPRG 232
++++EL G L + + EE+ +V Q ++ G +GRGAP
Sbjct: 143 MALEELVGRLSTVDSYSDDEEGSDGGKLYLTEEQWQARVKQREQEGSGNSGNKGRGAPGT 202
Query: 233 GRGRGR-GRQSLNKEV------------IECYKCHRLGHFQYEC--PDWEKK--VNYAEL 275
RG+ G KE ++C+ C GH+ +C P +++ N +
Sbjct: 203 QNHRGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQCRKPRRQRRGEANLVQA 262
Query: 276 EEEEELLLMAYV------------------EPHQTKKQEV--------------WYLDSG 303
EEE LLMA+V E H T+K+ + W+LD+G
Sbjct: 263 AEEEPTLLMAHVVGVSLAGEATLGRTPGGQEVHLTEKKVILDHEDGGEEEVTRDWFLDTG 322
Query: 304 CSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVVAKGSIRMQL-NGITQVISDVYYIPEL 362
+NHM G + F +L+ TVK G+ + + + +G++ + NG + + VYYIP+L
Sbjct: 323 ATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRGTVVFRCKNGDHRSLDTVYYIPKL 382
Query: 363 KNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVIMQTNMSGNIMFFLLASMAPKRSVCLQ 422
+ N++S+G+L +G I G C + P ++ + N ++ L +A VC+
Sbjct: 383 RKNIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKVKRDINYLYILKLHIA--NPVCMA 440
Query: 423 AEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVVGLPSLESPEKICTTCLTGKQHREPVP 482
A A H RFGHLN + LR L+ MV GLP ++ +++C CL GKQ R P P
Sbjct: 441 ASGGDT--AWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDHTDQLCDGCLAGKQRRLPFP 498
Query: 483 KRSLWRASKQLQLVHSDICGPIKPSWNSDKRYILSFIDDHTRKTWVYFLHEKSEAFVKFK 542
+ + +RA + L+LVH D+CGPI P+ ++Y L +DD +R W+ L K EA K
Sbjct: 499 EEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMSRHMWIRLLSGKHEAATAIK 558
Query: 543 EYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFCRSQGINRQLTTTYTP*QNGVAERKNR 602
+++ GVE E G + LRTDR EFTS EF ++C G+ R+LT Y+P QNGV ER+N+
Sbjct: 559 QFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQ 618
Query: 603 TIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRCPIVAVENKTPEEAWSGEKPVVHYFRI 662
T++ RSML +P FW EAV V++ NR P A+ TP EAW G +P V + R+
Sbjct: 619 TVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRV 678
Query: 663 FECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESKAWRLYVPVSKKIIVSKDVVFEEEESW 722
F CV +V KLDD+ + VF+G SKA+R+Y PV +++ VS+DVVF+E +W
Sbjct: 679 FGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVVRRVCVSRDVVFDEAATW 738
Query: 723 DW------GRIEEEIKLDILECGEEDQNEEENGRTDLNNLSSNSSSSSNSLPESLPNEPI 776
W EEE +D D + G + + +S + P S P P
Sbjct: 739 AWRDPETEATEEEEFTVDFF-VNPVDSVVADLGEQASTPVQGGTYPASTATPPSPPEVPA 797
Query: 777 S----NTPEELVEGR---VVRERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAV 829
+ P + G +R RRV + T L+ + + ++ +P+S EA
Sbjct: 798 GVEFCSPPNSVTPGTNEGPIRYRRVQDILS--ATEPVLDFDYSDQCLLASEEPMSLAEAE 855
Query: 830 KNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAK 889
+ WR AM E++SIE NQ+W LP G K IG+KWV+K K + G V K KARLVAK
Sbjct: 856 QQLCWRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAK 915
Query: 890 GYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQP 949
GY Q+ +D+ EVFAPVAR++T+R+++ VAA WE+ +DVKSAFL+G+L+EEV+V QP
Sbjct: 916 GYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQP 975
Query: 950 KGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRI 1009
GFI KG+E +V RLKKALYGLKQA RAW +++ + +F + +E ++ + G
Sbjct: 976 PGFIEKGKEGQVLRLKKALYGLKQAPRAWNAKLHNTLISLNFIKSETESAVYVRGTGSSR 1035
Query: 1010 LIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RR 1069
LIV + DLG + Y+LG+EV Q DG+F+
Sbjct: 1036 LIVGV-----------------------------DLGLLSYYLGMEVVQKDDGVFLSQTA 1066
Query: 1070 YARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVVGSLMYLTVTRPDLMY 1129
YA +L + M N+ + P KL ++ GG VD T+++ VGSL YL TRPDL Y
Sbjct: 1067 YAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYLVNTRPDLAY 1126
Query: 1130 GVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFY-KKGGSNMKLMAFPDSDYAGDLD 1188
V +SRFM PT HW A K ILRY+ GT D+G ++ ++ ++L+ F DSD AGDLD
Sbjct: 1127 SVGYVSRFMEKPTSEHWAAVKHILRYIAGTLDVGCWFGRREKGELRLIGFSDSDMAGDLD 1186
Query: 1189 DRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEE 1248
DR+ST+ ++MLG ++SW S+KQ VVALS+ EAEYIAA ACQ +WL R+L ++ E+
Sbjct: 1187 DRKSTTGVLYMLGDSLISWQSQKQKVVALSSCEAEYIAATTGACQGIWLNRLLAELLGED 1246
Query: 1249 KTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIM 1308
T + DN I L KNPV H +SKHID RFHF+R+ V I + Y ++DQ+ADI+
Sbjct: 1247 PGQTVMKVDNKSAINLCKNPVLHDRSKHIDTRFHFIRECVEKKQIAVEYVRTEDQLADIL 1306
Query: 1309 TKPIKLEQFEKLRGMLGVTE 1328
TKP+ +F +LR +G+ +
Sbjct: 1307 TKPVGRVRFLELRKKMGLEQ 1326
>gb|AAV59370.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50933159|ref|XP_476107.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1332
Score = 823 bits (2127), Expect = 0.0
Identities = 489/1356 (36%), Positives = 740/1356 (54%), Gaps = 126/1356 (9%)
Query: 18 HYDYWSMTMENFLRSKEMWSLVDEGIPVLETGTTPASEEQMKAVEEAKLKDLKVKNYLFQ 77
+Y W++ M L+++ +W+ VD G +D + L Q
Sbjct: 55 NYADWALLMRVNLQAQGLWAAVDPGYAEFR-------------------EDRQAMAALLQ 95
Query: 78 AIGREILETILDKETSKEIWNSMKQKYHGSSKVKREQLQVMRREFDLLAMKEGEKVDSFL 137
A+ +E+L + K+T+KE+W+++K G +V+ + Q +R +++ + K+GE V+ F
Sbjct: 96 AVPKEMLRPLSKKDTAKEVWDAIKTMRVGVDRVREAREQALRSQYEAIQFKDGETVEDFA 155
Query: 138 GRTLIVVNKMKSNGETMEHSTVVSKILRSLTSKFNYVVCSIEESNDLSILSIDELHGSLL 197
R +V ++ G T+ ++ K+LR + ++ + SIE+ DL + ++EL G L
Sbjct: 156 LRLHALVIDIRDMGGTLTDEHMLKKLLRVVPFHYHQLALSIEQMLDLKTMPLEELVGRLA 215
Query: 198 VHEQ---------RMQGHQEEEHVLKVAQEDRSSRGRGRGAPRGGRGRGRGRQSLNKE-- 246
E + + Q+ K A SS+ + RG RGG+G G S K+
Sbjct: 216 AIESYKPEWTARMKKKEPQDTSPGKKGAGSSSSSKKQWRGK-RGGQGCS-GEGSSGKDGG 273
Query: 247 --------VIECYKCHRLGHFQYECPDWEKKVNYAELEEEEELLLMA------------- 285
EC K R + ++ + AE +EE LLL
Sbjct: 274 APAASRDRSSECRKPRR---------ERRQEAHVAEAQEEPVLLLATASAMVTTAAPGTI 324
Query: 286 ---------YVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAV 336
+V H+ + W+LD+G SNHM G++E+F DL++ V+ G+ + + +
Sbjct: 325 VLDEPHAQLHVGRHEQLSPDRWFLDTGASNHMSGHREFFTDLDDTVRGVVRFGDGSVIDI 384
Query: 337 VAKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGV 395
G + ++ NG +++S VYYIP+LK+NL+S+GQL E G AI I DG + R +
Sbjct: 385 CGFGDVTLECYNGAHRIVSGVYYIPKLKSNLISLGQLDENGCAIHIDDGVMTIRDRARAL 444
Query: 396 IMQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMV 455
+ + + + L +A + VCL A ++ + H R+GHLN LR L+ MV
Sbjct: 445 VAKVTRTEGRSYLLDLKVA--QPVCLVASC--EEVPWLWHARYGHLNFDSLRRLAQGAMV 500
Query: 456 VGLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYI 515
GLP +E ++IC C KQ R P P + +RA++ L+LVH D+CGPI P+ KR++
Sbjct: 501 RGLPDIEQVDRICDCCQIAKQRRAPFPSEAKYRATEPLELVHGDLCGPISPATPGGKRHL 560
Query: 516 LSFIDDHTRKTWVYFLHEKSEAFVKFKEYKA-GVEKEIGAHITCLRTDRVCEFTSNEFDE 574
L +DD +R WV L K +A ++ +A GV C+ TS
Sbjct: 561 LLLVDDMSRYMWVVLLGTKDQAPAAIRDIQAKGV---------------ACDVTS----- 600
Query: 575 FCRSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQN 634
Y+P QNGV ER+N+TI+ + RS+L K++P FW E V VHI N
Sbjct: 601 -----------PLPYSPQQNGVVERRNQTIVAMARSLLKAKEMPGRFWGEVVVTAVHILN 649
Query: 635 RCPIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDE 694
R P A++ TP EAW G +P VHYFR F CVA+V SKL+D+SK VFLG D
Sbjct: 650 RSPTRALDGLTPYEAWYGRRPNVHYFRTFGCVAYVKNVRPHLSKLEDRSKAMVFLGYEDG 709
Query: 695 SKAWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLN 754
SKA+R++ V+ ++ VS+DVVF+EE WDW ++E D+
Sbjct: 710 SKAYRVFDLVTNRVHVSRDVVFDEEAKWDWAAT--------------GTGDDEADPADIF 755
Query: 755 NLSSNSSSSSNSLPESLPNEPISNTPEELVEGRVVRERRVPSWFADYETREGLEENLNAM 814
++S S + + P ++ P++ V R R + + + T E + +
Sbjct: 756 SISYTFHSVLDD-EQCSGARPDADEPQDAVTPAPRRYRTLAN--INETTSPVREFQYSGL 812
Query: 815 MMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQSWELTVLPKGVKPIGVKWVFKTKLN 874
++ ++PVSF EA WR AM E++SIE N++W L LP +PIG+KWV+K K +
Sbjct: 813 CLLAADEPVSFTEAEVQACWRKAMIDEVKSIEENKTWSLVPLPAEHRPIGLKWVYKIKRD 872
Query: 875 EDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARLDTIRVILEVAAQFSWEVFQLDVKSA 934
G + K+KARLVAKGY Q+H +D+ EVFAPVAR++T+R +L +AAQ W+V +DVKSA
Sbjct: 873 LVGSIVKYKARLVAKGYVQQHGIDFEEVFAPVARIETVRSLLALAAQEGWQVHHMDVKSA 932
Query: 935 FLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALYGLKQALRAWYSRIEAYFVREDFERC 994
FL+G+L+EEV+V QP GF GEE KVYRL KALYGL+QA RAWY++++A ++ FE
Sbjct: 933 FLNGDLEEEVYVSQPLGFEVTGEEAKVYRLHKALYGLRQAPRAWYAKLDATLIKMGFEGS 992
Query: 995 PSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMCDEFKSSMMLEFDMSDLGKMKYFLGV 1054
S+ ++ ++ LIV +YVDDL+ G+ + FK M EF MSDLG + ++LG+
Sbjct: 993 TSDPAVYKRNSEHSTLIVGVYVDDLVIIGSQVSVIQGFKVEMQKEFKMSDLGLLSFYLGI 1052
Query: 1055 EVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNPTVPGTKLSKDEGGVRVDETLFKQVV 1114
+VKQ GI + YA ++L + M N + P +LSK+ VD T ++ ++
Sbjct: 1053 QVKQTATGIALNQSAYALNILKKNGMDGCNPCQVPMEARLRLSKESTNSLVDATQYRSLI 1112
Query: 1115 GSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWLAAKRILRYLKGTTDLGIFYKKGGSN-M 1173
GSL YL TR DL Y V +SRFM P H AAK +LRY+ GT G +Y + SN +
Sbjct: 1113 GSLRYLANTRLDLAYAVGYLSRFMEKPATDHLAAAKHLLRYVAGTVGWGCWYGRKQSNIV 1172
Query: 1174 KLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVSWSSKKQYVVALSTTEAEYIAAALCACQ 1233
L + DSD GD+DDR+ST+ VF LG +++W S+KQ VVALS+ EAEYIA ACQ
Sbjct: 1173 PLTGYCDSDMGGDVDDRKSTTGVVFALGENIITWQSQKQKVVALSSCEAEYIAVTTAACQ 1232
Query: 1234 CVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSKNPVFHGKSKHIDVRFHFLRDLVNDGVI 1293
+WL R++ +I +EK + DN I L KNP+ + +SKHID RFHF+R V I
Sbjct: 1233 GIWLARLISEITGDEKKCVVLKVDNKSAISLCKNPLLNDRSKHIDTRFHFIRGYVEKKEI 1292
Query: 1294 KLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGVTEV 1329
++ Y +++Q+ADI+TK + +F++L+G LG+ E+
Sbjct: 1293 EVEYVRTEEQVADILTKSLGRVKFQELQGRLGMLEI 1328
>ref|XP_506380.1| PREDICTED OSJNBa0007H12.22 gene product [Oryza sativa (japonica
cultivar-group)]
Length = 1094
Score = 798 bits (2060), Expect = 0.0
Identities = 435/1083 (40%), Positives = 647/1083 (59%), Gaps = 47/1083 (4%)
Query: 278 EEELLLMAYVEPHQTKKQEVWYLDSGCSNHMKGNKEWFLDLEEDFSRTVKLGNDTRMAVV 337
E++++L V + E W+LD+G +NHM G++ F DL+ TVK G+ + + +
Sbjct: 28 EKKVILNHEVAEEEDNTTE-WFLDTGATNHMTGSRSAFADLDTGVVGTVKFGDGSVVDIR 86
Query: 338 AKGSIRMQL-NGITQVISDVYYIPELKNNLLSIGQLQEKGLAILIQDGTCKVFHPMRGVI 396
+G++ Q NG + + VY+IP+L N++SIG+L +G I G C + P ++
Sbjct: 87 GRGTVLFQCKNGDHRSLEAVYFIPKLCKNIISIGRLDARGYDAHIYHGVCTLRDPDGLLL 146
Query: 397 MQTNMSGNIMFFLLASMAPKRSVCLQAEAVSQKEAHM*HCRFGHLNHKGLRTLSHKKMVV 456
+ S + ++ L +MA R +CL A + A H RFGHLN + LR L+ +MV
Sbjct: 147 AKVKRSPSFLYILKLNMA--RPICLAANGT--ETAWRWHARFGHLNFQALRRLAQAEMVR 202
Query: 457 GLPSLESPEKICTTCLTGKQHREPVPKRSLWRASKQLQLVHSDICGPIKPSWNSDKRYIL 516
GLP ++ +++C CL GKQ R P P ++ +RA L+LVH D+CGPI P+ ++Y L
Sbjct: 203 GLPVIDHVDQLCDGCLAGKQRRVPFPDKARFRAQDALELVHGDLCGPIAPATPGGRKYFL 262
Query: 517 SFIDDHTRKTWVYFLHEKSEAFVKFKEYKAGVEKEIGAHITCLRTDRVCEFTSNEFDEFC 576
+DD +R W+ L K EA K++KAGVE E G + LRTDR EFTS EF EFC
Sbjct: 263 LLVDDMSRFMWIRLLSGKHEAAAAIKQFKAGVEMESGRKLRALRTDRGGEFTSVEFTEFC 322
Query: 577 RSQGINRQLTTTYTP*QNGVAERKNRTIMNVVRSMLNEKQVPKVFWSEAVRWCVHIQNRC 636
+G++RQLT Y+P QNGV ER+N T++ RSML +P FW EAV V++ NR
Sbjct: 323 ADRGVSRQLTAPYSPQQNGVVERRNLTVVAAARSMLKAAGMPAQFWGEAVMAAVYLWNRS 382
Query: 637 PIVAVENKTPEEAWSGEKPVVHYFRIFECVAHVHVPDQRRSKLDDKSKKCVFLGVSDESK 696
P +++ TP EAW G +P V + ++F CV +V KLDD+ + VF+G SK
Sbjct: 383 PTKSLDGVTPYEAWHGRRPSVEHLKVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSK 442
Query: 697 AWRLYVPVSKKIIVSKDVVFEEEESWDWGRIEEEIKLDILECGEEDQNEEENGRTDLNN- 755
A+R+Y PVS+++ VS+DVVF+E W W E + + G E+ E T L
Sbjct: 443 AYRMYDPVSRRVYVSRDVVFDEAAMWPWRDPE------VTQTGGEEDFTVEFFSTPLGGN 496
Query: 756 ------------LSSNSSSSSNSLPESLPN-EPISNTPEELVE-------------GRVV 789
+ ++ S + P++ P P++++ VE G
Sbjct: 497 RVPDVVVEHGGARETETAPSPLATPDAAPVWSPVTSSSPAGVEFCTPPSDASIESDGAPP 556
Query: 790 RERRVPSWFADYETREGLEENLNAMMMVTENDPVSFGEAVKNKKWRDAMSAEIESIERNQ 849
R R V + A T L+ + N ++ E +P SF EA K + W AM E+ SIE N
Sbjct: 557 RFRTVNNVLAT--TTPVLDFDYNDECLIAEQEPFSFKEAEKEQCWMKAMEEEMSSIEGNN 614
Query: 850 SWELTVLPKGVKPIGVKWVFKTKLNEDGDVEKFKARLVAKGYAQRHEVDYTEVFAPVARL 909
+W L LP + IG+KWV+K K + +G++ K+KARLVAKGY Q+ +DY EVFAPVAR+
Sbjct: 615 TWFLCDLPSDHRAIGLKWVYKIKRSAEGEILKYKARLVAKGYVQQQGIDYEEVFAPVARM 674
Query: 910 DTIRVILEVAAQFSWEVFQLDVKSAFLHGELKEEVFVQQPKGFIRKGEEDKVYRLKKALY 969
+T+R+++ +AA W++ +DVKSAFL+GEL+E+V+V QP GF+ + +E+KV +LKKALY
Sbjct: 675 ETVRLLVALAAHEGWQIHHMDVKSAFLNGELEEDVYVVQPPGFVVEHKENKVLKLKKALY 734
Query: 970 GLKQALRAWYSRIEAYFVREDFERCPSEHILFTKSKGGRILIVSLYVDDLIFTGNDRVMC 1029
GLKQA RAWY+++++ DF R +E+ ++T+ +G L+V +YVDDLI TG
Sbjct: 735 GLKQAPRAWYAKLDSTLANLDFVRSATENAVYTRGEGNARLVVGVYVDDLIITGALGTEI 794
Query: 1030 DEFKSSMMLEFDMSDLGKMKYFLGVEVKQC*DGIFIC*RRYARDVLARFDMRDSNAVKNP 1089
+FK M F MS+LG + Y+LG+EVKQ +GI + YA +L + M+ N + P
Sbjct: 795 AKFKEQMRSMFSMSNLGLLSYYLGMEVKQTEEGITMSQAGYAGRILEKAGMQGCNPCQVP 854
Query: 1090 TVPGTKLSKDEGGVR--VDETLFKQVVGSLMYLTVTRPDLMYGVSLISRFMSSPTMSHWL 1147
KL K GV +D T F+ ++GSL YL TRPDL Y V +SR+M +P HW
Sbjct: 855 MDARLKLKK---GVEDCIDATQFRSIIGSLRYLVNTRPDLSYSVGYVSRYMENPGAEHWA 911
Query: 1148 AAKRILRYLKGTTDLGIFYKKGGSNM-KLMAFPDSDYAGDLDDRRSTSRFVFMLGSGVVS 1206
A K ILRY+ G+ ++G+ ++KG +L+ + DSD AGD+DDR+ST+ +F LG +++
Sbjct: 912 AMKHILRYVAGSLNIGLKFRKGEEKFPRLVGYSDSDMAGDVDDRKSTTGVLFKLGENLIT 971
Query: 1207 WSSKKQYVVALSTTEAEYIAAALCACQCVWLIRVLEKIGVEEKTSTEIMCDNSFTIQLSK 1266
W S+KQ +VALS+ EAEYIAA ACQ +WL R+L ++ +++ T + DN I L K
Sbjct: 972 WQSQKQKIVALSSCEAEYIAATTAACQGIWLARLLGELQMKKPCCTMLKVDNKSAINLCK 1031
Query: 1267 NPVFHGKSKHIDVRFHFLRDLVNDGVIKLSYCNSQDQIADIMTKPIKLEQFEKLRGMLGV 1326
NPV H +SKHID R+HF+R+ V +++ Y +S +Q+ADI+ KP+ +F +LRG LG+
Sbjct: 1032 NPVLHDRSKHIDTRYHFIRERVERKEVEVEYTSSAEQLADILIKPLGKVRFLELRGKLGL 1091
Query: 1327 TEV 1329
+ V
Sbjct: 1092 SPV 1094
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,243,136,579
Number of Sequences: 2540612
Number of extensions: 96656822
Number of successful extensions: 316675
Number of sequences better than 10.0: 2512
Number of HSP's better than 10.0 without gapping: 1934
Number of HSP's successfully gapped in prelim test: 579
Number of HSP's that attempted gapping in prelim test: 307259
Number of HSP's gapped (non-prelim): 5001
length of query: 1332
length of database: 863,360,394
effective HSP length: 140
effective length of query: 1192
effective length of database: 507,674,714
effective search space: 605148259088
effective search space used: 605148259088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)
Lotus: description of TM0346.12