BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0288.5
(186 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001014706.1| CG13376-PA [Drosophila melanogaster] gi|6167... 61 2e-08
gi|41616114 TPA: HDC16773 [Drosophila melanogaster] 61 2e-08
gb|AAM48449.1| RE74758p [Drosophila melanogaster] gi|23093701|gb... 59 7e-08
emb|CAE60064.1| Hypothetical protein CBG03580 [Caenorhabditis br... 58 1e-07
dbj|BAD35374.1| putative glycine-rich cell wall structural prote... 58 1e-07
gb|AAL36454.1| circumsporozoite protein [Plasmodium vinckei pett... 57 2e-07
dbj|BAD33245.1| putative glycine-rich cell wall structural prote... 57 3e-07
ref|NP_701754.1| erythrocyte membrane protein 1 (PfEMP1) [Plasmo... 55 7e-07
ref|NP_173035.1| expressed protein [Arabidopsis thaliana] 55 1e-06
emb|CAA69104.1| glycine-rich protein [Zea mays] gi|7442081|pir||... 55 1e-06
ref|NP_774522.1| hypothetical protein bll7882 [Bradyrhizobium ja... 55 1e-06
ref|ZP_00422739.1| Outer membrane autotransporter barrel [Burkho... 54 2e-06
ref|NP_853796.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2... 54 2e-06
gb|AAK44356.1| PE_PGRS family protein [Mycobacterium tuberculosi... 54 3e-06
emb|CAD88219.2| Hypothetical protein ZK643.8 [Caenorhabditis ele... 53 4e-06
ref|ZP_00464538.1| PE-PGRS family protein [Burkholderia cenocepa... 53 5e-06
ref|YP_177693.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculo... 53 5e-06
ref|NP_298108.1| endo-1,4-beta-glucanase [Xylella fastidiosa 9a5... 53 5e-06
gb|EAK81623.1| hypothetical protein UM00873.1 [Ustilago maydis 5... 53 5e-06
ref|NP_102641.1| hypothetical protein mll0950 [Mesorhizobium lot... 52 6e-06
>ref|NP_001014706.1| CG13376-PA [Drosophila melanogaster] gi|61677853|gb|AAX52465.1|
CG13376-PA [Drosophila melanogaster]
Length = 193
Score = 60.8 bits (146), Expect = 2e-08
Identities = 52/156 (33%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 25 W*VGVGGGG--GDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGG 82
W G GGGG G GD ++ V T G W GGGGGGGG GGG
Sbjct: 29 WSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGGWSSGGGGGGGGWS------SGGG 82
Query: 83 NGGGGSDRVMVVVAIWWWLWCQ-----WW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DG 137
GGGG W W GGG GSG D V + ++ L G G
Sbjct: 83 GGGGG--------------WSSGGGGGGWSSGGGGGSGSD--VKLIKIISLGGGGGGHSG 126
Query: 138 GGGGCS-------MVAATVEGEGNGGGGGDRVVVVV 166
GGGG S + G G+ GGG +V+ ++
Sbjct: 127 GGGGWSSGGGGGGWSSGGSGGHGSSGGGDTKVIKII 162
Score = 48.9 bits (115), Expect = 7e-05
Identities = 49/162 (30%), Positives = 62/162 (38%), Gaps = 40/162 (24%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGG-------------CGRV 74
G GGG G GD ++ V T G W GGGGGGGG G
Sbjct: 34 GGGGGHGGGGDVQIIKVITESGSSGGGGGGGGWSSGGGGGGGGWSSGGGGGGGGWSSGGG 93
Query: 75 AATVDGGGNGGGGSD-RVMVVVAIWWWL---------WCQ------WW*GG-GGSGSGGD 117
GG GG GSD +++ ++++ W W GG GG GS G
Sbjct: 94 GGGWSSGGGGGSGSDVKLIKIISLGGGGGGHSGGGGGWSSGGGGGGWSSGGSGGHGSSGG 153
Query: 118 RVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
+ ++ L+ G GGGG G G GGGGG
Sbjct: 154 GDTKVIKIIKLSSGGHGGAGGGG----------GHGGGGGGG 185
Score = 45.1 bits (105), Expect = 0.001
Identities = 38/113 (33%), Positives = 42/113 (36%), Gaps = 44/113 (38%)
Query: 56 GWWWWW*GGGGGGGGCGRVA-------ATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*G 108
G W GGGGG GG G V + GGG GGGG W
Sbjct: 27 GGWSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGG------------------WSS 68
Query: 109 GGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEG--NGGGGG 159
GGG G GG W GGGGG ++ G G +GGGGG
Sbjct: 69 GGGGGGGG-----------------WSSGGGGGGGGWSSGGGGGGWSSGGGGG 104
Score = 44.7 bits (104), Expect = 0.001
Identities = 40/124 (32%), Positives = 45/124 (36%), Gaps = 45/124 (36%)
Query: 56 GWWWWW*GGGGGGGGCGRVAATV--------DGGGNGGGGSDRVMVVVAIWWWLWCQWW* 107
G W GGGGGG G G + GGG GGGG W
Sbjct: 26 GGGWSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGG--------------WSSGGG 71
Query: 108 GGGG---SGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
GGGG SG GG GW GGGGG S G GGG G V +
Sbjct: 72 GGGGGWSSGGGGGGG------------GWSSGGGGGGWS--------SGGGGGSGSDVKL 111
Query: 165 VVLV 168
+ ++
Sbjct: 112 IKII 115
Score = 43.5 bits (101), Expect = 0.003
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 32/100 (32%)
Query: 60 WW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRV 119
W GG GGG G GGG+GGGG +++ V+ + GGG G GG
Sbjct: 20 WSSGGSGGGWSSGGGG----GGGHGGGGDVQIIKVIT-------ESGSSGGGGGGGG--- 65
Query: 120 VAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
W GGGGG G GGGGG
Sbjct: 66 --------------WSSGGGGG----GGGWSSGGGGGGGG 87
Score = 41.2 bits (95), Expect = 0.015
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 25 W*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGG----GGGCGRVAATVDG 80
W G GGGG SG ++ ++++ G GGGGG GGG G + G
Sbjct: 88 WSSGGGGGGWSSGGGGGSGSDVKLIKIISLGGGGGGHSGGGGGWSSGGGGGGWSSGGSGG 147
Query: 81 GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
G+ GGG +V+ ++ + G GG+G GG
Sbjct: 148 HGSSGGGDTKVIKIIKLSSG-------GHGGAGGGG 176
>gi|41616114 TPA: HDC16773 [Drosophila melanogaster]
Length = 241
Score = 60.8 bits (146), Expect = 2e-08
Identities = 52/156 (33%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 25 W*VGVGGGG--GDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGG 82
W G GGGG G GD ++ V T G W GGGGGGGG GGG
Sbjct: 77 WSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGGWSSGGGGGGGGWS------SGGG 130
Query: 83 NGGGGSDRVMVVVAIWWWLWCQ-----WW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DG 137
GGGG W W GGG GSG D V + ++ L G G
Sbjct: 131 GGGGG--------------WSSGGGGGGWSSGGGGGSGSD--VKLIKIISLGGGGGGHSG 174
Query: 138 GGGGCS-------MVAATVEGEGNGGGGGDRVVVVV 166
GGGG S + G G+ GGG +V+ ++
Sbjct: 175 GGGGWSSGGGGGGWSSGGSGGHGSSGGGDTKVIKII 210
Score = 48.9 bits (115), Expect = 7e-05
Identities = 49/162 (30%), Positives = 62/162 (38%), Gaps = 40/162 (24%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGG-------------CGRV 74
G GGG G GD ++ V T G W GGGGGGGG G
Sbjct: 82 GGGGGHGGGGDVQIIKVITESGSSGGGGGGGGWSSGGGGGGGGWSSGGGGGGGGWSSGGG 141
Query: 75 AATVDGGGNGGGGSD-RVMVVVAIWWWL---------WCQ------WW*GG-GGSGSGGD 117
GG GG GSD +++ ++++ W W GG GG GS G
Sbjct: 142 GGGWSSGGGGGSGSDVKLIKIISLGGGGGGHSGGGGGWSSGGGGGGWSSGGSGGHGSSGG 201
Query: 118 RVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
+ ++ L+ G GGGG G G GGGGG
Sbjct: 202 GDTKVIKIIKLSSGGHGGAGGGG----------GHGGGGGGG 233
Score = 45.1 bits (105), Expect = 0.001
Identities = 38/113 (33%), Positives = 42/113 (36%), Gaps = 44/113 (38%)
Query: 56 GWWWWW*GGGGGGGGCGRVA-------ATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*G 108
G W GGGGG GG G V + GGG GGGG W
Sbjct: 75 GGWSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGG------------------WSS 116
Query: 109 GGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEG--NGGGGG 159
GGG G GG W GGGGG ++ G G +GGGGG
Sbjct: 117 GGGGGGGG-----------------WSSGGGGGGGGWSSGGGGGGWSSGGGGG 152
Score = 44.7 bits (104), Expect = 0.001
Identities = 40/124 (32%), Positives = 45/124 (36%), Gaps = 45/124 (36%)
Query: 56 GWWWWW*GGGGGGGGCGRVAATV--------DGGGNGGGGSDRVMVVVAIWWWLWCQWW* 107
G W GGGGGG G G + GGG GGGG W
Sbjct: 74 GGGWSSGGGGGGGHGGGGDVQIIKVITESGSSGGGGGGGG--------------WSSGGG 119
Query: 108 GGGG---SGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
GGGG SG GG GW GGGGG S G GGG G V +
Sbjct: 120 GGGGGWSSGGGGGGG------------GWSSGGGGGGWS--------SGGGGGSGSDVKL 159
Query: 165 VVLV 168
+ ++
Sbjct: 160 IKII 163
Score = 43.5 bits (101), Expect = 0.003
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 32/100 (32%)
Query: 60 WW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRV 119
W GG GGG G GGG+GGGG +++ V+ + GGG G GG
Sbjct: 68 WSSGGSGGGWSSGGGG----GGGHGGGGDVQIIKVIT-------ESGSSGGGGGGGG--- 113
Query: 120 VAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
W GGGGG G GGGGG
Sbjct: 114 --------------WSSGGGGG----GGGWSSGGGGGGGG 135
Score = 41.2 bits (95), Expect = 0.015
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 25 W*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGG----GGGCGRVAATVDG 80
W G GGGG SG ++ ++++ G GGGGG GGG G + G
Sbjct: 136 WSSGGGGGGWSSGGGGGSGSDVKLIKIISLGGGGGGHSGGGGGWSSGGGGGGWSSGGSGG 195
Query: 81 GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
G+ GGG +V+ ++ + G GG+G GG
Sbjct: 196 HGSSGGGDTKVIKIIKLSSG-------GHGGAGGGG 224
>gb|AAM48449.1| RE74758p [Drosophila melanogaster] gi|23093701|gb|AAF50135.2|
CG12523-PA [Drosophila melanogaster]
gi|24662313|ref|NP_648411.1| CG12523-PA [Drosophila
melanogaster]
Length = 250
Score = 58.9 bits (141), Expect = 7e-08
Identities = 44/138 (31%), Positives = 63/138 (44%), Gaps = 31/138 (22%)
Query: 42 VVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGN--------GGGGSDRVMV 93
V ++ + + VA G+ GGGGGGGG G ++ GGG+ GGGGSD
Sbjct: 3 VFISLLALAAVAQAGFIG---GGGGGGGGYGGGGSSHGGGGDGGYSYGGGGGGGSDH--- 56
Query: 94 VVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLA-MIGWW*DGGGGGCSMVAATVEGE 152
GGG GS +V+ + A G W GGGGG A G
Sbjct: 57 --------------HGGGGGSPPVKVIKVIHETAPAGGSGGWQSGGGGGSGWTAG--GGG 100
Query: 153 GNGGGGGDRVVVVVLVVA 170
G+GGGGG + + ++ +++
Sbjct: 101 GHGGGGGGQEIKIIKIIS 118
Score = 49.7 bits (117), Expect = 4e-05
Identities = 47/144 (32%), Positives = 54/144 (36%), Gaps = 23/144 (15%)
Query: 28 GVGGGGGD---SGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNG 84
G GGGG D G V V+ A G W GGGGG G GGG+G
Sbjct: 48 GGGGGGSDHHGGGGGSPPVKVIKVIHETAPAGGSGGWQSGGGGGSGW----TAGGGGGHG 103
Query: 85 GGGSDRVMVVVAIWWWLWCQWW*GGGGSG---------SGGDRVVAAMVVVVLAMIGWW* 135
GGG + + ++ I GGGG G SGG A G W
Sbjct: 104 GGGGGQEIKIIKIISQQASSGGHGGGGYGGSSGGYGGASGGGWSSGG------ASSGGWS 157
Query: 136 DGGGGGCSMV-AATVEGEGNGGGG 158
GGGGG V + E N G G
Sbjct: 158 SGGGGGAEAVKIIKIISESNSGAG 181
>emb|CAE60064.1| Hypothetical protein CBG03580 [Caenorhabditis briggsae]
Length = 375
Score = 58.2 bits (139), Expect = 1e-07
Identities = 67/232 (28%), Positives = 82/232 (34%), Gaps = 76/232 (32%)
Query: 19 WWGW--QW--W*VGVGGGGGDSGD--------RLVVVVATMVVVVVAMIGWWWW---W*G 63
WW W +W W +G GGG GD LV V + MV V WW W W
Sbjct: 112 WWRWNRRWSRWNRRIGAGGGGIGDGQGGIGGSELVKVESEMVKVESEDQSWWRWNRRWSR 171
Query: 64 G----GGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAI--------WWWLWCQWW----- 106
G GGGG G + G G GGS+ V V + WW W + W
Sbjct: 172 WNRRIGAGGGGIGDGQGGIGDGQGGIGGSELVEVESEMVKVESEDRSWWRWNRRWSRWNR 231
Query: 107 ---*GGGGSGSGGD--------RVVAAMVVVVLAM-------IGWW------------*D 136
GGGG G G +V + MV V M WW
Sbjct: 232 RIGAGGGGIGDGQGGIGGSELVKVESEMVKVESEMDKVESEDRSWWRWNRRWSRWNRRIG 291
Query: 137 GGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVTIE---WW---RRWRV 182
GGGG G+G G GG +V + + V + WW RRW +
Sbjct: 292 AGGGGI--------GDGQGEIGGSELVEMESEMVKVESDDRSWWRWNRRWSI 335
Score = 58.2 bits (139), Expect = 1e-07
Identities = 62/203 (30%), Positives = 78/203 (37%), Gaps = 48/203 (23%)
Query: 22 WQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMI-GWWWWW*GGGGGGGGCGRVAATVDG 80
W W +G GGG GD + + +V + + W W G GGGG G G+ G
Sbjct: 28 WSRWNRRIGAGGGGIGDGQGEIGGSELVEMDSEDRSQWNWIIGAGGGGIGDGQGGI---G 84
Query: 81 GGNGG-GGSDRVMVVVAI--------WWWLWCQWW--------*GGGGSGSGGD------ 117
G GG GGS+ V V + WW W + W GGGG G G
Sbjct: 85 DGQGGIGGSELVEVESEMVKVESEDRSWWRWNRRWSRWNRRIGAGGGGIGDGQGGIGGSE 144
Query: 118 --RVVAAMVVVVLAMIGWW------------*DGGGGGCSMVAATVEGEGNGGGGGDRVV 163
+V + MV V WW GGGG + G+G GG GG +V
Sbjct: 145 LVKVESEMVKVESEDQSWWRWNRRWSRWNRRIGAGGGGIGDGQGGI-GDGQGGIGGSELV 203
Query: 164 VVVLVVAVVTIE---WW---RRW 180
V + V E WW RRW
Sbjct: 204 EVESEMVKVESEDRSWWRWNRRW 226
Score = 45.8 bits (107), Expect = 6e-04
Identities = 62/204 (30%), Positives = 73/204 (35%), Gaps = 67/204 (32%)
Query: 19 WWGW--QW--W*VGVGGGGGDSGD---------------RLVVVVATMVVVVVAMIGWWW 59
WW W +W W +G GGG GD LV V + MV V WW
Sbjct: 162 WWRWNRRWSRWNRRIGAGGGGIGDGQGGIGDGQGGIGGSELVEVESEMVKVESEDRSWWR 221
Query: 60 W---W*GG----GGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAI--------------- 97
W W G GGGG G DG G G GGS+ V V +
Sbjct: 222 WNRRWSRWNRRIGAGGGGIG------DGQG-GIGGSELVKVESEMVKVESEMDKVESEDR 274
Query: 98 WWWLWCQWW--------*GGGGSGS-----GGDRVV---AAMVVVVLAMIGWW*DGGGGG 141
WW W + W GGGG G GG +V + MV V WW
Sbjct: 275 SWWRWNRRWSRWNRRIGAGGGGIGDGQGEIGGSELVEMESEMVKVESDDRSWW--RWNRR 332
Query: 142 CSMVAATVEGEGNGGGGGDRVVVV 165
S+ T+ G G GG G +V V
Sbjct: 333 WSIWNRTI-GAGGGGIGRSELVEV 355
Score = 35.8 bits (81), Expect = 0.61
Identities = 35/113 (30%), Positives = 47/113 (40%), Gaps = 16/113 (14%)
Query: 82 GNGGGGSDRVMVVVAIWWWLWCQW----W*GGGGSGSGGDRVVAAMVVVV----LAMIGW 133
G G GS R + A+ W +W GGGG G G + + +V + + W
Sbjct: 9 GAGALGS-RAVGAGALGSGCWSRWNRRIGAGGGGIGDGQGEIGGSELVEMDSEDRSQWNW 67
Query: 134 W*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVTIE---WW---RRW 180
GGGG + G+G GG GG +V V + V E WW RRW
Sbjct: 68 IIGAGGGGIGDGQGGI-GDGQGGIGGSELVEVESEMVKVESEDRSWWRWNRRW 119
>dbj|BAD35374.1| putative glycine-rich cell wall structural protein [Oryza sativa
(japonica cultivar-group)]
Length = 321
Score = 58.2 bits (139), Expect = 1e-07
Identities = 47/140 (33%), Positives = 47/140 (33%), Gaps = 64/140 (45%)
Query: 21 GWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG 80
GW W G GGGGG G GGGGGGGG G G
Sbjct: 76 GWGVWSGGGGGGGGGGGG------------------------GGGGGGGGGGGGGGGGGG 111
Query: 81 GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGG 140
GG GGGG R GGGG G GG G GGGG
Sbjct: 112 GGGGGGGGGR-----------------GGGGGGGGGG--------------GGGGGGGGG 140
Query: 141 GCSMVAATVEGEGNGGGGGD 160
G G G GG GGD
Sbjct: 141 G---------GGGGGGNGGD 151
Score = 48.5 bits (114), Expect = 9e-05
Identities = 37/106 (34%), Positives = 37/106 (34%), Gaps = 60/106 (56%)
Query: 56 GWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSG 115
GW W GGGGGGGG GGG GGGG GGGG G G
Sbjct: 76 GWGVWSGGGGGGGGG---------GGGGGGGG--------------------GGGGGGGG 106
Query: 116 GDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDR 161
G GGGGG G GGGGG R
Sbjct: 107 G--------------------GGGGG-----------GGGGGGGGR 121
Score = 43.1 bits (100), Expect = 0.004
Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 50/133 (37%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G+G G G +GDR + GG G G + V GGGN GGG
Sbjct: 185 GIGRGNGQNGDRGINS-------------------GGRGKIKGSNGGSRNVIGGGNKGGG 225
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
D GG + GD GW GGGGG V+
Sbjct: 226 GD------------------GGSDNAQSGD-----------GGGGWESSGGGGGRGDVSG 256
Query: 148 TVEGEGNGGGGGD 160
G G GGGGGD
Sbjct: 257 A--GGGGGGGGGD 267
Score = 35.4 bits (80), Expect = 0.80
Identities = 41/138 (29%), Positives = 46/138 (32%), Gaps = 40/138 (28%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G GGGGGGGG G D G NG G
Sbjct: 125 GGGGGGGGGG-------------------------GGGGGGGGGGGGGNGGDDGDNGDDG 159
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGG-----GC 142
D GG G G G R + + + G GG G
Sbjct: 160 EDGDGDAGGR----------GGKGRGRGRGRGMGSGIGRGNGQNGDRGINSGGRGKIKGS 209
Query: 143 SMVAATVEGEGNGGGGGD 160
+ + V G GN GGGGD
Sbjct: 210 NGGSRNVIGGGNKGGGGD 227
Score = 35.4 bits (80), Expect = 0.80
Identities = 16/27 (59%), Positives = 16/27 (59%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSD 89
GGGGGGGG G GGGNGG D
Sbjct: 128 GGGGGGGGGGGGGGGGGGGGNGGDDGD 154
>gb|AAL36454.1| circumsporozoite protein [Plasmodium vinckei petteri]
Length = 442
Score = 57.4 bits (137), Expect = 2e-07
Identities = 42/101 (41%), Positives = 45/101 (43%), Gaps = 30/101 (29%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
GGGGGGG G+ VDGGG GGGG D +V GGG G G D V
Sbjct: 158 GGGGGGGGGQDPPVVDGGG-GGGGQDPPVV--------------DGGGGGGGQDPPVV-- 200
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
DGGGGG V+G G GGGG D VV
Sbjct: 201 ------------DGGGGGGGQDPPVVDG-GGGGGGQDPPVV 228
Score = 54.7 bits (130), Expect = 1e-06
Identities = 49/137 (35%), Positives = 52/137 (37%), Gaps = 52/137 (37%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG D VV GGGGG G+ VDGGG GGGG
Sbjct: 158 GGGGGGGGGQDPPVV----------------------DGGGGGGGQDPPVVDGGG-GGGG 194
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
D +V GGG G G D V DGGGGG
Sbjct: 195 QDPPVV--------------DGGGGGGGQDPPVV--------------DGGGGGGGQDPP 226
Query: 148 TVEGEGNGGGGGDRVVV 164
V+G G GGGG D VV
Sbjct: 227 VVDG-GGGGGGQDPPVV 242
Score = 49.7 bits (117), Expect = 4e-05
Identities = 47/136 (34%), Positives = 50/136 (36%), Gaps = 52/136 (38%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSD 89
GGGGG D VV GGGGG G+ VDGGG GGGG D
Sbjct: 202 GGGGGGGQDPPVV----------------------DGGGGGGGQDPPVVDGGG-GGGGQD 238
Query: 90 RVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATV 149
+V GGG G G D V DGGGGG V
Sbjct: 239 PPVV--------------DGGGGGGGQDPPVV--------------DGGGGGGGQDPPVV 270
Query: 150 EGEGNGGGGGDRVVVV 165
+G G G GG D VV
Sbjct: 271 DG-GGGRGGQDAPGVV 285
Score = 47.8 bits (112), Expect = 2e-04
Identities = 36/90 (40%), Positives = 37/90 (41%), Gaps = 28/90 (31%)
Query: 75 AATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW 134
AA VDGGG GGGG VV GGG G G D V
Sbjct: 153 AAVVDGGGGGGGGGQDPPVV-------------DGGGGGGGQDPPVV------------- 186
Query: 135 *DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
DGGGGG V+G G GGGG D VV
Sbjct: 187 -DGGGGGGGQDPPVVDG-GGGGGGQDPPVV 214
Score = 32.7 bits (73), Expect = 5.2
Identities = 26/67 (38%), Positives = 27/67 (39%), Gaps = 23/67 (34%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSD 89
GGGGG D VV GGGGG G+ VDGGG G GG D
Sbjct: 244 GGGGGGGQDPPVV----------------------DGGGGGGGQDPPVVDGGG-GRGGQD 280
Query: 90 RVMVVVA 96
VV A
Sbjct: 281 APGVVPA 287
>dbj|BAD33245.1| putative glycine-rich cell wall structural protein [Oryza sativa
(japonica cultivar-group)]
Length = 239
Score = 56.6 bits (135), Expect = 3e-07
Identities = 47/148 (31%), Positives = 49/148 (32%), Gaps = 57/148 (38%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG SG GW W W GGGG G GGG GGGG
Sbjct: 78 GGGGGGGSSGGSSW------------SYGWGWGWGTDSGGGGSSGGGGGGGGGGGGGGGG 125
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW------------* 135
GGGG G GG R WW
Sbjct: 126 GG------------------GGGGGGGGGRRC-------------WWGCGNGRRRHKGGK 154
Query: 136 DGGGGGCSM--VAATVEGEGNGGGGGDR 161
+GGGGG + E EG GGGG R
Sbjct: 155 EGGGGGEGRKGIRTEREREGVGGGGAGR 182
Score = 56.2 bits (134), Expect = 4e-07
Identities = 52/152 (34%), Positives = 57/152 (37%), Gaps = 38/152 (25%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVA------------MIGWWWWW*GGGGGGGGCGRVA 75
GV GG +VVV+A M V+VV + GGGGGG G A
Sbjct: 7 GVPTMGGAPAAAVVVVLAFMAVMVVVPVFGADGGDGRVQVQSLERPVGGGGGGNGTSYNA 66
Query: 76 ATV------DGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLA 129
+V GGG GGGGS W W W GGG SG GG
Sbjct: 67 TSVAGRKDGGGGGGGGGGSSGGSSWSYGWGWGWGTDSGGGGSSGGGG------------- 113
Query: 130 MIGWW*DGGGGGCSMVAATVEGEGNGGGGGDR 161
GGGGG G G GGGGG R
Sbjct: 114 -------GGGGGGGGGGGGGGGGGGGGGGGRR 138
>ref|NP_701754.1| erythrocyte membrane protein 1 (PfEMP1) [Plasmodium falciparum 3D7]
gi|23496926|gb|AAN36478.1| erythrocyte membrane protein
1 (PfEMP1) [Plasmodium falciparum 3D7]
Length = 2359
Score = 55.5 bits (132), Expect = 7e-07
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 59/132 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G GG GGGGG G + GGG+GGGG
Sbjct: 595 GSGGGGGSGGG------------------------GGSGGGGGSGGGGGSGGGGGSGGGG 630
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
GGGGSG GG GGGGG
Sbjct: 631 GSG-----------------GGGGSGGGGG------------------SGGGGGSGGGGG 655
Query: 148 TVEGEGNGGGGG 159
+ G G+GGGGG
Sbjct: 656 SGGGGGSGGGGG 667
Score = 55.5 bits (132), Expect = 7e-07
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 59/132 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G GG GGGGG G + GGG+GGGG
Sbjct: 619 GSGGGGGSGGG------------------------GGSGGGGGSGGGGGSGGGGGSGGGG 654
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
GGGGSG GG GGGGG
Sbjct: 655 GSG-----------------GGGGSGGGGG------------------SGGGGGSGGGGG 679
Query: 148 TVEGEGNGGGGG 159
+ G G+GGGGG
Sbjct: 680 SGGGGGSGGGGG 691
Score = 55.5 bits (132), Expect = 7e-07
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 59/132 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G GG GGGGG G + GGG+GGGG
Sbjct: 613 GSGGGGGSGGG------------------------GGSGGGGGSGGGGGSGGGGGSGGGG 648
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
GGGGSG GG GGGGG
Sbjct: 649 GSG-----------------GGGGSGGGGG------------------SGGGGGSGGGGG 673
Query: 148 TVEGEGNGGGGG 159
+ G G+GGGGG
Sbjct: 674 SGGGGGSGGGGG 685
Score = 55.5 bits (132), Expect = 7e-07
Identities = 42/132 (31%), Positives = 46/132 (34%), Gaps = 59/132 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G GG GGGGG G + GGG+GGGG
Sbjct: 601 GSGGGGGSGGG------------------------GGSGGGGGSGGGGGSGGGGGSGGGG 636
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
GGGGSG GG GGGGG
Sbjct: 637 GSG-----------------GGGGSGGGGG------------------SGGGGGSGGGGG 661
Query: 148 TVEGEGNGGGGG 159
+ G G+GGGGG
Sbjct: 662 SGGGGGSGGGGG 673
Score = 53.9 bits (128), Expect = 2e-06
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 35/97 (36%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GG GGGGG G + GGG+GGGG GGGGSG GG
Sbjct: 594 GGSGGGGGSGGGGGSGGGGGSGGGGGSG-----------------GGGGSGGGGG----- 631
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGGGG + G G+GGGGG
Sbjct: 632 -------------SGGGGGSGGGGGSGGGGGSGGGGG 655
Score = 47.0 bits (110), Expect = 3e-04
Identities = 34/96 (35%), Positives = 38/96 (39%), Gaps = 39/96 (40%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
GGG GGG G + GGG+GGGG GGGGSG GG
Sbjct: 593 GGGSGGGGG----SGGGGGSGGGGGSG-----------------GGGGSGGGGG------ 625
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGGGG + G G+GGGGG
Sbjct: 626 ------------SGGGGGSGGGGGSGGGGGSGGGGG 649
Score = 39.7 bits (91), Expect = 0.042
Identities = 29/88 (32%), Positives = 32/88 (35%), Gaps = 36/88 (40%)
Query: 72 GRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMI 131
G + V GG GGGGS GGGGSG GG
Sbjct: 586 GSSSVHVGGGSGGGGGSG------------------GGGGSGGGGG-------------- 613
Query: 132 GWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGGGG + G G+GGGGG
Sbjct: 614 ----SGGGGGSGGGGGSGGGGGSGGGGG 637
Score = 37.0 bits (84), Expect = 0.27
Identities = 29/90 (32%), Positives = 30/90 (33%), Gaps = 41/90 (45%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GGGGG G G GGGGG G + GG GGGG
Sbjct: 649 GSGGGGGSGGGG-----------------------GSGGGGGSGGGGGSGGGGGSGGGGG 685
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGD 117
S GGGGSGS D
Sbjct: 686 SG------------------GGGGSGSKSD 697
>ref|NP_173035.1| expressed protein [Arabidopsis thaliana]
Length = 483
Score = 55.1 bits (131), Expect = 1e-06
Identities = 40/109 (36%), Positives = 48/109 (43%), Gaps = 29/109 (26%)
Query: 63 GGGGGGGGCGRVAATVDG--GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGS------ 114
G GG GG ++ +G GG GGG + M V+ W GGGGSG+
Sbjct: 317 GNKGGNGGSIKIGVGTNGITGGTGGGEAGAGMQVMQGW---------GGGGSGAATQVMQ 367
Query: 115 ---GGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
GGD V M GW GGGG V ++G G GGGGGD
Sbjct: 368 GCGGGDAGAITQV-----MQGW----GGGGAGAVTQVMQGCGGGGGGGD 407
Score = 49.3 bits (116), Expect = 5e-05
Identities = 53/173 (30%), Positives = 61/173 (34%), Gaps = 64/173 (36%)
Query: 8 AAVAMKVVIGWWWGWQWW*VGV--GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGG 65
A M+V+ GW G V G GGGD+G + M GW
Sbjct: 344 AGAGMQVMQGWGGGGSGAATQVMQGCGGGDAG-----------AITQVMQGW-------- 384
Query: 66 GGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGS----------- 114
GGGG G V + G G GGGG D GGGG G+
Sbjct: 385 -GGGGAGAVTQVMQGCGGGGGGGD------------------GGGGQGTGIGGGGGGEQG 425
Query: 115 -----GGD---RVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGD +V L MI GGGGG V + G G G GGG
Sbjct: 426 TGVGGGGDTCTQVTHGGGGAPLTMI-----GGGGGEQGVTGSDGGGGRGRGGG 473
Score = 36.6 bits (83), Expect = 0.36
Identities = 37/110 (33%), Positives = 44/110 (39%), Gaps = 26/110 (23%)
Query: 63 GGGGGGGGCGRVAA---TVDGGG---NGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG 116
GGG G G GR + DGGG N GG + + V G G+GG
Sbjct: 292 GGGRGAEGGGRGSTGEGVTDGGGRTGNKGGNGGSIKIGVGT----------NGITGGTGG 341
Query: 117 DRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVV 166
A M V M GW GGGG AAT +G GGG + V+
Sbjct: 342 GEAGAGMQV----MQGW----GGGGSG--AATQVMQGCGGGDAGAITQVM 381
Score = 32.3 bits (72), Expect = 6.8
Identities = 27/74 (36%), Positives = 29/74 (38%), Gaps = 22/74 (29%)
Query: 28 GVGGGGGDS--------GDRLVVVVATMVVVVVAMIGWWWWW*GGGG--------GGGGC 71
G+GGGGG GD V + MIG GGGG GGGG
Sbjct: 415 GIGGGGGGEQGTGVGGGGDTCTQVTHGGGGAPLTMIG------GGGGEQGVTGSDGGGGR 468
Query: 72 GRVAATVDGGGNGG 85
GR V GGG G
Sbjct: 469 GRGGGKVAGGGKKG 482
>emb|CAA69104.1| glycine-rich protein [Zea mays] gi|7442081|pir||T03371 glycine-rich
protein grp3 - maize
Length = 256
Score = 54.7 bits (130), Expect = 1e-06
Identities = 40/108 (37%), Positives = 44/108 (40%), Gaps = 21/108 (19%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGGGGGG G A GGG+GGGG + WW + GGGG G GG
Sbjct: 38 GGGGGGGGSGSTGAAGYGGGSGGGGGYGIGKGGGDWWNNFVSSVAGGGGGGQGGGG---- 93
Query: 123 MVVVVLAMIGWW*DGG----GGGCSMVAAT-------VEGEGNGGGGG 159
G GG G G S AA+ EG G GGG
Sbjct: 94 ------GTNGGSGSGGGSGYGSGTSSTAASGPSSGNYANAEGKGAGGG 135
Score = 38.5 bits (88), Expect = 0.094
Identities = 31/95 (32%), Positives = 35/95 (36%), Gaps = 25/95 (26%)
Query: 72 GRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMI 131
G A+ GGG GGGGS GGGSG GG +
Sbjct: 30 GSYASAGGGGGGGGGGSGSTGAAGY------------GGGSGGGGGYGIGK------GGG 71
Query: 132 GWW*D-------GGGGGCSMVAATVEGEGNGGGGG 159
WW + GGGGG T G G+GGG G
Sbjct: 72 DWWNNFVSSVAGGGGGGQGGGGGTNGGSGSGGGSG 106
Score = 34.7 bits (78), Expect = 1.4
Identities = 37/132 (28%), Positives = 42/132 (31%), Gaps = 59/132 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G+G GGGD WW + GGGG G+ GG NGG G
Sbjct: 65 GIGKGGGD---------------------WWNNFVSSVAGGGGGGQGGG---GGTNGGSG 100
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
S GG G GSG A+ G S A
Sbjct: 101 SG------------------GGSGYGSGTSSTAAS-----------------GPSSGNYA 125
Query: 148 TVEGEGNGGGGG 159
EG+G GGG G
Sbjct: 126 NAEGKGAGGGMG 137
Score = 32.7 bits (73), Expect = 5.2
Identities = 28/97 (28%), Positives = 33/97 (33%), Gaps = 24/97 (24%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GG G GGG G A G GG R W + G G+G+GG
Sbjct: 181 GGSGAGGGHGGGAGAPSYGTGGGLAEARARRQRRSWG----SGYAAGIGAGTGG------ 230
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGGGG + G G+G G G
Sbjct: 231 --------------GGGGGFQGASGGGGGSGSGSGSG 253
Score = 32.0 bits (71), Expect = 8.8
Identities = 34/110 (30%), Positives = 42/110 (37%), Gaps = 22/110 (20%)
Query: 63 GGGGGGGGCGRVAATVDGG-GNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVA 121
GGG GGG G + GG G G G S + + ++ GGGSG+GG
Sbjct: 133 GGGMGGGADGAYGSGAGGGVGKGQGESGVALAPSSDGYYNGGAADATGGGSGAGGGHGGG 192
Query: 122 AMVVVVLAMIGWW*DGGGGGCSMVAATVE------------GEGNGGGGG 159
A G G GGG + A + G G GGGGG
Sbjct: 193 A---------GAPSYGTGGGLAEARARRQRRSWGSGYAAGIGAGTGGGGG 233
>ref|NP_774522.1| hypothetical protein bll7882 [Bradyrhizobium japonicum USDA 110]
gi|27356166|dbj|BAC53147.1| bll7882 [Bradyrhizobium
japonicum USDA 110]
Length = 987
Score = 54.7 bits (130), Expect = 1e-06
Identities = 48/156 (30%), Positives = 63/156 (39%), Gaps = 28/156 (17%)
Query: 31 GGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSDR 90
GGGG G R V VV GG GG GG G + GGG GG G
Sbjct: 159 GGGGGGGGRAATVSGNYAAVVNLT--------GGNGGAGGLGPYNGSAGGGGGGGDGLYL 210
Query: 91 VMVVVAIWWWLWCQWW*GG----------GGSGSGGDRVVAAMVVVVL---AMIGWW*DG 137
+ + ++ + GG GG+G GG VV V ++ G G
Sbjct: 211 SGGDLQVNAGVFIRGGSGGDAGTTSADGNGGAGGGGKGVVVGTTATVTNAGSITGG--SG 268
Query: 138 GGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVT 173
G GG S + G G+GGGGGD +V+ + + T
Sbjct: 269 GSGGGSAI-----GSGSGGGGGDGLVLAAGGIVINT 299
Score = 53.5 bits (127), Expect = 3e-06
Identities = 59/159 (37%), Positives = 64/159 (40%), Gaps = 53/159 (33%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG---GGGGGGCGRVAATVDG------ 80
GGGGG SG G + GG GGGGGG GR AATV G
Sbjct: 138 GGGGGGSGS-----------------GGGGGFQGGINAGGGGGGGGR-AATVSGNYAAVV 179
Query: 81 ---GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSG---SGGDRVVAAMVVVVLAMIGWW 134
GGNGG G + + GGGG G SGGD V A V +
Sbjct: 180 NLTGGNGGAG--------GLGPYNGSAGGGGGGGDGLYLSGGDLQVNAGVFI-------- 223
Query: 135 *DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVT 173
GG GG A T +GNGG GG VVV A VT
Sbjct: 224 -RGGSGG---DAGTTSADGNGGAGGGGKGVVVGTTATVT 258
Score = 45.4 bits (106), Expect = 8e-04
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 17/96 (17%)
Query: 65 GGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMV 124
GGG GG G G G+GGGG + + GGGG G G V+
Sbjct: 128 GGGTGGAGYSGGGGGGSGSGGGGGFQGGINA------------GGGGGGGGRAATVSGNY 175
Query: 125 VVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
V+ + GG GG + G GGGGGD
Sbjct: 176 AAVVNL-----TGGNGGAGGLGPYNGSAGGGGGGGD 206
Score = 35.8 bits (81), Expect = 0.61
Identities = 34/112 (30%), Positives = 36/112 (31%), Gaps = 43/112 (38%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
G G GG G A GGG GG G GGGG GSG
Sbjct: 113 GSGPYGGAAGNNVAP--GGGTGGAGYS------------------GGGGGGSGS------ 146
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVTI 174
GGGGG + G GGGGG V AVV +
Sbjct: 147 --------------GGGGGFQ---GGINAGGGGGGGGRAATVSGNYAAVVNL 181
Score = 35.4 bits (80), Expect = 0.80
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 22/129 (17%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSD 89
G GG G + VVV T V I GG GG G G + G G+GGGG D
Sbjct: 238 GNGGAGGGGKGVVVGTTATVTNAGSIT-------GGSGGSGGG----SAIGSGSGGGGGD 286
Query: 90 RVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATV 149
+V+A + GG G GD V GG G S V
Sbjct: 287 G--LVLAAGGIVINTGMISGGTGGPQGDPRYPTFFPPV---------AGGAGISGAGLVV 335
Query: 150 EGEGNGGGG 158
+ G GG
Sbjct: 336 QNAGIISGG 344
Score = 34.3 bits (77), Expect = 1.8
Identities = 39/115 (33%), Positives = 41/115 (34%), Gaps = 32/115 (27%)
Query: 67 GGGGCGRVAATVDGGGNG--GGGSDRV-----------MVVVAIWWWLWCQWW*GGGGSG 113
G GG G +A + GNG GGG D V GGGGSG
Sbjct: 86 GAGGAGGLAGDGNAAGNGASGGGPDTAGSGPYGGAAGNNVAPGGGTGGAGYSGGGGGGSG 145
Query: 114 SGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGE---------GNGGGGG 159
SGG G GGGGG AATV G GNGG GG
Sbjct: 146 SGGGG----------GFQGGINAGGGGGGGGRAATVSGNYAAVVNLTGGNGGAGG 190
>ref|ZP_00422739.1| Outer membrane autotransporter barrel [Burkholderia vietnamiensis
G4] gi|67533872|gb|EAM30625.1| Outer membrane
autotransporter barrel [Burkholderia vietnamiensis G4]
Length = 1642
Score = 53.9 bits (128), Expect = 2e-06
Identities = 48/141 (34%), Positives = 55/141 (38%), Gaps = 34/141 (24%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSD 89
GGGGG +G V T V V M GG GG GG G +GGG GGGG+
Sbjct: 167 GGGGGGAG---VYSTGTSVTVNSGMTVQ-----GGTGGNGGAGTSGPVSNGGGGGGGGAA 218
Query: 90 RVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSM----- 144
VMV A G GG+G GG G+ GGGGG +
Sbjct: 219 LVMVTPAADVSNQGTLIGGNGGNGGGG---------------GFAGGGGGGGDGLLTLGS 263
Query: 145 ------VAATVEGEGNGGGGG 159
+ V G G GGGG
Sbjct: 264 GSQVTNIGTIVGGVGGAGGGG 284
Score = 44.3 bits (103), Expect = 0.002
Identities = 43/142 (30%), Positives = 53/142 (37%), Gaps = 25/142 (17%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNG-- 84
V GGGGG G LV+V V + GG GG GG G A GGG+G
Sbjct: 206 VSNGGGGGGGGAALVMVTPAADVSNQGTL------IGGNGGNGGGGGFAGGGGGGGDGLL 259
Query: 85 --GGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGC 142
G GS + + G GG+G GG A V G+
Sbjct: 260 TLGSGSQVTNIGTIVG---------GVGGAGGGGASTAGASGAGVNLASGF------TVL 304
Query: 143 SMVAATVEGEGNGGGGGDRVVV 164
+ V G GNGG G ++V
Sbjct: 305 TNVGTITGGAGNGGAAGAGIIV 326
Score = 39.7 bits (91), Expect = 0.042
Identities = 33/111 (29%), Positives = 38/111 (33%), Gaps = 10/111 (9%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQW----------W*GGGGSG 113
GG GG G A D G G GG+ + + Q + GGGG G
Sbjct: 112 GGATSGGTGGTGAMNDSGQGGPGGAPAAALAGDVVINANVQGGAGQAFDGFNFAGGGGGG 171
Query: 114 SGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
G V V M GG GG G G GGGG V+V
Sbjct: 172 GAGVYSTGTSVTVNSGMTVQGGTGGNGGAGTSGPVSNGGGGGGGGAALVMV 222
>ref|NP_853796.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|31616888|emb|CAD92990.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium bovis AF2122/97]
Length = 538
Score = 53.9 bits (128), Expect = 2e-06
Identities = 47/141 (33%), Positives = 55/141 (38%), Gaps = 40/141 (28%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GG G G W W GG GG GG G V A V GG G G
Sbjct: 160 IGHGGSGGAGGH-----------------GGWLWGNGGVGGSGGAG-VGAGVAGGHGGAG 201
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMI-------GW-W*DGG 138
G+ + W GGG G+GG+ A +V + GW + DGG
Sbjct: 202 GAAGL--------------WGAGGGGGNGGNGADANIVSGGDGGLGGAGGGGGWLYGDGG 247
Query: 139 GGGCSMVAATVEGEGNGGGGG 159
GG A G G GG GG
Sbjct: 248 AGGHGGQGAIGLGGGAGGDGG 268
Score = 48.1 bits (113), Expect = 1e-04
Identities = 57/171 (33%), Positives = 60/171 (34%), Gaps = 53/171 (30%)
Query: 21 GWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG 80
GW W G GG GG G + VA G W GGGGG GG G A V G
Sbjct: 173 GWLW---GNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGA--GGGGGNGGNGADANIVSG 227
Query: 81 -----GGNGGGGSDRVMVVVAIWWWLWCQWW*GGG--------GSGSGGDRVVAAMVVVV 127
GG GGGG WL+ GG G G+GGD
Sbjct: 228 GDGGLGGAGGGGG-----------WLYGDGGAGGHGGQGAIGLGGGAGGDGGQGG----- 271
Query: 128 LAMIGWW*DGGGGG----------------CSMVAATVEGE--GNGGGGGD 160
A G W GG GG M AA G GNGG GGD
Sbjct: 272 -AGRGLWGTGGAGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGD 321
Score = 46.2 bits (108), Expect = 5e-04
Identities = 34/102 (33%), Positives = 39/102 (37%), Gaps = 21/102 (20%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
G G GG G A + GG+GG G WLW G GG G G V A
Sbjct: 145 GAAGQAGGAGGPAGLIGHGGSGGAGGH--------GGWLW-----GNGGVGGSGGAGVGA 191
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
V GG GG + + G GNGG G D +V
Sbjct: 192 GVA--------GGHGGAGGAAGLWGAGGGGGNGGNGADANIV 225
Score = 42.4 bits (98), Expect = 0.007
Identities = 45/146 (30%), Positives = 52/146 (34%), Gaps = 42/146 (28%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GGD G V A+ GG G GG G A + GG GG
Sbjct: 313 IGNGGAGGDGG-----VGAS----------------GGVAGVGGAGGNAMLIGHGGAGGA 351
Query: 87 GSDRVMVVVA------IWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGG 140
G D A L+ G GGSG G V A + GG G
Sbjct: 352 GGDSSFANGAAGGAGGAGGHLF-----GNGGSGGHGGAVTAGNTGI----------GGAG 396
Query: 141 GCSMVAATVEGEGNGGGGGDRVVVVV 166
G A + G GG GGDR +V
Sbjct: 397 GVGGDARLIGHGGAGGAGGDRAGALV 422
Score = 39.7 bits (91), Expect = 0.042
Identities = 31/101 (30%), Positives = 40/101 (38%), Gaps = 16/101 (15%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
G GG GG G A + GG GG G DR +V G GG+G G ++
Sbjct: 391 GIGGAGGVGGDARLIGHGGAGGAGGDRAGALVGRDG--------GPGGNGGAGGQLYGNG 442
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
G GG GG + A + G G GG G ++
Sbjct: 443 --------GDGGPGGQGGQAFGANNIGGTGGAGGNGGPAIL 475
Score = 39.3 bits (90), Expect = 0.055
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 37/134 (27%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATV--DGGGNGG 85
G+GG GG GD +IG GG GG G R A V DGG G
Sbjct: 391 GIGGAGGVGGD-------------ARLIGH------GGAGGAGGDRAGALVGRDGGPGGN 431
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMV 145
GG+ + G GG G G + A + G GG GG +++
Sbjct: 432 GGAGGQLY--------------GNGGDGGPGGQGGQAFGANNIGGTGG--AGGNGGPAIL 475
Query: 146 AATVEGEGNGGGGG 159
+ G GG GG
Sbjct: 476 SGNGGNGGAGGAGG 489
Score = 38.5 bits (88), Expect = 0.094
Identities = 45/154 (29%), Positives = 54/154 (34%), Gaps = 26/154 (16%)
Query: 16 IGWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGR-V 74
+G G W G GG GG G + + GG GG GG GR +
Sbjct: 232 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGA---------------GGDGGQGGAGRGL 276
Query: 75 AATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GG--GGSGSGGDRVVAAMVVVV----- 127
T GG+GG G + + GG G G+GGD V A V
Sbjct: 277 WGTGGAGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGA 336
Query: 128 ---LAMIGWW*DGGGGGCSMVAATVEGEGNGGGG 158
+IG GG GG S A G G GG
Sbjct: 337 GGNAMLIGHGGAGGAGGDSSFANGAAGGAGGAGG 370
Score = 37.4 bits (85), Expect = 0.21
Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 33/133 (24%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GG GDR +V GG GG GG G G G GG
Sbjct: 405 IGHGGAGGAGGDRAGALVGRD---------------GGPGGNGGAGGQLYGNGGDGGPGG 449
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVA 146
+ I GG G+GG +++ G +GG GG
Sbjct: 450 QGGQAFGANNIGGT--------GGAGGNGGPAILS----------GNGGNGGAGGAGGAG 491
Query: 147 ATVEGEGNGGGGG 159
G G GG G
Sbjct: 492 GAGGGAGGVGGAG 504
>gb|AAK44356.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|15839505|ref|NP_334542.1| PE_PGRS family protein
[Mycobacterium tuberculosis CDC1551]
Length = 561
Score = 53.5 bits (127), Expect = 3e-06
Identities = 46/139 (33%), Positives = 53/139 (38%), Gaps = 28/139 (20%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GG G G W W GG GG GG G V A V GG G G
Sbjct: 174 IGHGGSGGAGGSGAAGGAGGH--------GGWLWGNGGVGGSGGAG-VGAGVAGGHGGAG 224
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGG-----GG 141
G+ + W GGG G+GG+ A +V +G GGG GG
Sbjct: 225 GAAGL--------------WGAGGGGGNGGNGADANIVSGGDGGLGGAGGGGGWLYGDGG 270
Query: 142 CSMVAATVEGEGNGGGGGD 160
G G GG GGD
Sbjct: 271 AGGHGGQGAGGGAGGAGGD 289
Score = 47.8 bits (112), Expect = 2e-04
Identities = 36/103 (34%), Positives = 41/103 (38%), Gaps = 14/103 (13%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGG-GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVA 121
G G GG G A + GG+GG GGS WLW G GG G G V
Sbjct: 159 GAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGHGGWLW-----GNGGVGGSGGAGVG 213
Query: 122 AMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
A V GG GG + + G GNGG G D +V
Sbjct: 214 AGVA--------GGHGGAGGAAGLWGAGGGGGNGGNGADANIV 248
Score = 47.0 bits (110), Expect = 3e-04
Identities = 43/138 (31%), Positives = 52/138 (37%), Gaps = 24/138 (17%)
Query: 24 WW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGN 83
W G GG GG+ D +V + G W + GG GG GG G GG+
Sbjct: 230 WGAGGGGGNGGNGADANIVSGGDGGLGGAGGGGGWLYGDGGAGGHGGQGAGGGAGGAGGD 289
Query: 84 GG-GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGC 142
GG GG+ R + W GG G G+GG + G GG GG
Sbjct: 290 GGQGGAGRGL------WGTGGAGGHGGQGGGTGGPPLP--------GQAGMGAAGGAGGL 335
Query: 143 SMVAATVEGEGNGGGGGD 160
GNGG GGD
Sbjct: 336 I---------GNGGAGGD 344
Score = 44.7 bits (104), Expect = 0.001
Identities = 44/142 (30%), Positives = 50/142 (34%), Gaps = 34/142 (23%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVV--VAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNG 84
+G GG GGD G VA + +IG GG GG GG A GG G
Sbjct: 336 IGNGGAGGDGGVGASGGVAGVXGAGGNAMLIGH-----GGAGGAGGDSSFANGAAGGAGG 390
Query: 85 GGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSM 144
GG G GGSG G V A + GG GG
Sbjct: 391 AGGH-----------------LFGNGGSGGHGGAVTAGNTGI----------GGAGGVGG 423
Query: 145 VAATVEGEGNGGGGGDRVVVVV 166
A + G GG GGDR +V
Sbjct: 424 DARLIGHGGAGGAGGDRAGALV 445
Score = 44.3 bits (103), Expect = 0.002
Identities = 41/132 (31%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GG GGDS A G + GG GG GG T GG G GG
Sbjct: 370 GAGGAGGDSS------FANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGG 423
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
R++ GG G+GGDR A++G DGG GG
Sbjct: 424 DARLIG--------------HGGAGGAGGDRAG--------ALVGR--DGGPGGNGGAGG 459
Query: 148 TVEGEGNGGGGG 159
+ G G GG G
Sbjct: 460 QLYGNGGDGGPG 471
Score = 39.7 bits (91), Expect = 0.042
Identities = 31/101 (30%), Positives = 40/101 (38%), Gaps = 16/101 (15%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
G GG GG G A + GG GG G DR +V G GG+G G ++
Sbjct: 414 GIGGAGGVGGDARLIGHGGAGGAGGDRAGALVGRDG--------GPGGNGGAGGQLYGNG 465
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
G GG GG + A + G G GG G ++
Sbjct: 466 --------GDGGPGGQGGQAFGANNIGGTGGAGGNGGPAIL 498
Score = 37.0 bits (84), Expect = 0.27
Identities = 46/154 (29%), Positives = 53/154 (33%), Gaps = 26/154 (16%)
Query: 16 IGWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGR-V 74
+G G W G GG GG G G GG GG GG GR +
Sbjct: 255 LGGAGGGGGWLYGDGGAGGHGGQG---------------AGGGAGGAGGDGGQGGAGRGL 299
Query: 75 AATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GG--GGSGSGGDRVVAAMVVVV----- 127
T GG+GG G + + GG G G+GGD V A V
Sbjct: 300 WGTGGAGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVXGA 359
Query: 128 ---LAMIGWW*DGGGGGCSMVAATVEGEGNGGGG 158
+IG GG GG S A G G GG
Sbjct: 360 GGNAMLIGHGGAGGAGGDSSFANGAAGGAGGAGG 393
Score = 35.0 bits (79), Expect = 1.0
Identities = 43/149 (28%), Positives = 54/149 (35%), Gaps = 33/149 (22%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVV-AMIGWWWWW*GGGGGGGGCGRVAATVDG-GGNG 84
+G GG GG GDR +V G + GG GG GG G A + GG G
Sbjct: 428 IGHGGAGGAGGDRAGALVGRDGGPGGNGGAGGQLYGNGGDGGPGGQGGQAFGANNIGGTG 487
Query: 85 GGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSM 144
G G + +++ G GG+G G GG GG
Sbjct: 488 GAGGNGGPAILS-----------GNGGNGGAGGA------------------GGAGGAGG 518
Query: 145 VAATVEGEGN--GGGGGDRVVVVVLVVAV 171
A V G G G GG + V LV A+
Sbjct: 519 GAGGVGGAGGAPGTGGTLQAAVSGLVTAL 547
>emb|CAD88219.2| Hypothetical protein ZK643.8 [Caenorhabditis elegans]
gi|33300317|emb|CAD88221.2| Hypothetical protein ZK643.8
[Caenorhabditis elegans]
Length = 774
Score = 53.1 bits (126), Expect = 4e-06
Identities = 40/97 (41%), Positives = 40/97 (41%), Gaps = 15/97 (15%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGGGGGGCG GGG GGGG C GGGG G GG A
Sbjct: 26 GGGGGGGGCGGGC----GGGCGGGGGCAPPPAP-------CGGGCGGGGGGCGGGGGCAP 74
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
A G GGGGGC G G GGGG
Sbjct: 75 PP----APCGGGCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 50.8 bits (120), Expect = 2e-05
Identities = 38/96 (39%), Positives = 40/96 (41%), Gaps = 29/96 (30%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
GGGGGGGCG GGG+ GGG VA C GGGGS GG VA
Sbjct: 156 GGGGGGGCGGGGGGGCGGGSSGGGG----YAVAPSGGGGC----GGGGSSGGGGYAVA-- 205
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGGGC G G+ GGGG
Sbjct: 206 ------------PSGGGGCG-------GGGSSGGGG 222
Score = 48.5 bits (114), Expect = 9e-05
Identities = 37/97 (38%), Positives = 37/97 (38%), Gaps = 37/97 (38%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
G GGGGGGCG GGG GGGG C GGGG G GG
Sbjct: 82 GCGGGGGGCGG-----GGGGCGGGGG--------------C----GGGGGGCGGG----- 113
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
G GGGGGC G G GG GG
Sbjct: 114 ---------GGGCGGGGGGCGGGGGGCGGGGGGGCGG 141
Score = 47.8 bits (112), Expect = 2e-04
Identities = 36/103 (34%), Positives = 37/103 (34%), Gaps = 41/103 (39%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GG GGGGGCG GGG G GG GGGG G GG
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGG--------------------GGGGCGGGG------ 128
Query: 123 MVVVVLAMIGWW*DGGGGGC------SMVAATVEGEGNGGGGG 159
G GGGGGC + G G GGGGG
Sbjct: 129 ---------GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 45.4 bits (106), Expect = 8e-04
Identities = 33/97 (34%), Positives = 34/97 (35%), Gaps = 32/97 (32%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
G GGGGGGCG GGG GG G GG G GG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCG--------------------GGSSGGCGG------ 149
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
G GGGGGC G G+ GGGG
Sbjct: 150 ------GSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 45.1 bits (105), Expect = 0.001
Identities = 42/112 (37%), Positives = 44/112 (38%), Gaps = 20/112 (17%)
Query: 64 GGGGGGGCGR-------VAATVDGGG--NGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGS 114
GGGGGGGCG A GGG GGG S VA C GGGGS
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGC----GGGGSSG 219
Query: 115 GGDRVVAAMVVVVLAMIGWW*DGG-------GGGCSMVAATVEGEGNGGGGG 159
GG A A G GG GGG S ++ G GGGGG
Sbjct: 220 GGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGG 271
Score = 34.7 bits (78), Expect = 1.4
Identities = 31/98 (31%), Positives = 35/98 (35%), Gaps = 19/98 (19%)
Query: 63 GGGGGGGGCGRVAATVDGGG---NGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRV 119
GGGG GG G +A GGG +GGGGS + GGG S GG
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Query: 120 VAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGG 157
GGGGG + G GGG
Sbjct: 273 A----------------GGGGGGGGSSGGYAGSSGGGG 294
>ref|ZP_00464538.1| PE-PGRS family protein [Burkholderia cenocepacia HI2424]
gi|67099143|gb|EAM16326.1| PE-PGRS family protein
[Burkholderia cenocepacia HI2424]
Length = 1435
Score = 52.8 bits (125), Expect = 5e-06
Identities = 52/151 (34%), Positives = 61/151 (39%), Gaps = 19/151 (12%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVD------G 80
G+GG GG +G L VV T+ +G GG GG GGG G V TV G
Sbjct: 116 GLGGSGGTTGG-LGGVVGTVANAATGAVGAVTGVLGGVGGSGGGLGGVVGTVTGALGGIG 174
Query: 81 GGNGGGGSDRVMVVV------AIWWWLWCQWW*GGGGSGSGG-----DRVVAAMVVVVLA 129
GGN GG V+ V A+ GGG G GG + V V
Sbjct: 175 GGNPTGGLGGVVGTVANTATGAVGTLTGALGGVGGGAGGLGGVVGTVGNAASGAVGTVTG 234
Query: 130 MIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
+G GG GG V TV G G GGG+
Sbjct: 235 ALGGVGGGGTGGLGGVIGTVTGALGGIGGGN 265
Score = 48.9 bits (115), Expect = 7e-05
Identities = 52/152 (34%), Positives = 59/152 (38%), Gaps = 23/152 (15%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG--GGGGGGCGRVAATVD------ 79
GVGGG G G VV T+ +G GG GGG GG G V TV
Sbjct: 206 GVGGGAGGLGG----VVGTVGNAASGAVGTVTGALGGVGGGGTGGLGGVIGTVTGALGGI 261
Query: 80 GGGNGGGGSDRVMVVV------AIWWWLWCQWW*GGGGSGSGG-----DRVVAAMVVVVL 128
GGGN GG V+ V A+ GGG G GG + V V
Sbjct: 262 GGGNPTGGLGGVVGTVANTATGAVGTLTGALGGVGGGTGGLGGIVGTVGNAASGAVGTVT 321
Query: 129 AMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
+G GG GG V TV G G GGG+
Sbjct: 322 GALGGVGGGGTGGLGGVVGTVTGALGGIGGGN 353
Score = 48.5 bits (114), Expect = 9e-05
Identities = 51/153 (33%), Positives = 59/153 (38%), Gaps = 25/153 (16%)
Query: 28 GVGGGGGDSGDRLVVV---VATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVD----- 79
GVGGG G G + V + V V +G GGGG GG G V TV
Sbjct: 435 GVGGGAGGLGGVVGAVGNAASGAVGTVTGALGGV-----GGGGTGGLGGVIGTVTGALGG 489
Query: 80 -GGGNGGGGSDRVMVVV------AIWWWLWCQWW*GGGGSGSGG-----DRVVAAMVVVV 127
GGGN GG V+ V A+ GGG G GG + V V
Sbjct: 490 IGGGNPTGGLGGVVGTVASTATGAVGTLTGALGGVGGGAGGLGGVVGTVGNAASGAVGTV 549
Query: 128 LAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGD 160
+G GG GG V TV G G GGG+
Sbjct: 550 TGALGGVGGGGTGGLGGVIGTVTGALGGIGGGN 582
Score = 44.7 bits (104), Expect = 0.001
Identities = 46/141 (32%), Positives = 54/141 (37%), Gaps = 26/141 (18%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
GVGGGG L VV T+ +G GG GGG GG G V TV G
Sbjct: 644 GVGGGGTGG---LGGVVGTVANTATGAVGTLTGALGGVGGGTGGLGGVVGTVANTATGAV 700
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGG--------DRVVAAMVVVVLAMIGWW*DGG 138
G+ + A+ GG G G+GG + V V +G GG
Sbjct: 701 GT----LTGAL----------GGVGGGTGGLGGVVGTVGNAASGAVGTVTGALGGVGGGG 746
Query: 139 GGGCSMVAATVEGEGNGGGGG 159
GG V TV G G GGG
Sbjct: 747 TGGLGGVVGTVTGALGGVGGG 767
Score = 44.3 bits (103), Expect = 0.002
Identities = 51/148 (34%), Positives = 57/148 (38%), Gaps = 31/148 (20%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG--GGGGGGCGRVAATVD------ 79
GVGGG G G +V T+ +G GG GGG GG G V TV
Sbjct: 294 GVGGGTGGLGG----IVGTVGNAASGAVGTVTGALGGVGGGGTGGLGGVVGTVTGALGGI 349
Query: 80 GGGNGGGGSDRVMVVVA---------IWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAM 130
GGGN GG V+ VA + L GG G G+GG V V L
Sbjct: 350 GGGNPTGGLGGVVGTVANTATGAVGTLTGAL------GGVGGGTGGLGGVVGTVTGALGG 403
Query: 131 IGWW*DGGGGGCSMVAATVEGEGNGGGG 158
IG GG GG V TV G G
Sbjct: 404 IG----GGTGGLGGVVGTVANTATGAVG 427
Score = 42.4 bits (98), Expect = 0.007
Identities = 45/146 (30%), Positives = 54/146 (36%), Gaps = 29/146 (19%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
G+GGG G L VV T+ +G GG GGG GG G V TV +G
Sbjct: 489 GIGGGNPTGG--LGGVVGTVASTATGAVGTLTGALGGVGGGAGGLGGVVGTVGNAASGAV 546
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGG------- 139
G+ V A+ G GG G+GG V V L IG GG
Sbjct: 547 GT----VTGALG---------GVGGGGTGGLGGVIGTVTGALGGIGGGNPTGGLGGVVGT 593
Query: 140 ------GGCSMVAATVEGEGNGGGGG 159
G + + G G GG GG
Sbjct: 594 VANTATGAVGTLTGALGGVGGGGTGG 619
Score = 42.0 bits (97), Expect = 0.009
Identities = 44/141 (31%), Positives = 53/141 (37%), Gaps = 36/141 (25%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
GVGGG G G +V V +G G GGG GG G V TV G G
Sbjct: 382 GVGGGTGGLGG--------VVGTVTGALG------GIGGGTGGLGGVVGTVANTATGAVG 427
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGG--------DRVVAAMVVVVLAMIGWW*DGGG 139
+ + A+ GG G G+GG + V V +G GG
Sbjct: 428 T----LTGAL----------GGVGGGAGGLGGVVGAVGNAASGAVGTVTGALGGVGGGGT 473
Query: 140 GGCSMVAATVEGEGNGGGGGD 160
GG V TV G G GGG+
Sbjct: 474 GGLGGVIGTVTGALGGIGGGN 494
Score = 39.3 bits (90), Expect = 0.055
Identities = 51/152 (33%), Positives = 58/152 (37%), Gaps = 26/152 (17%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG--GGGGGGCGRVAATVDG--GGN 83
GVGGG G G VV T+ +G GG GGG GG G V TV G GG
Sbjct: 709 GVGGGTGGLGG----VVGTVGNAASGAVGTVTGALGGVGGGGTGGLGGVVGTVTGALGGV 764
Query: 84 GGG--------GSDRVMVVVAIWWWLWCQWW*GGGGSGSGG-----DRVVAAMVVVVLAM 130
GGG G+ A+ GGG G GG + V V
Sbjct: 765 GGGTGGLGGVVGTVANTATGAVGTLTGALGGVGGGAGGLGGVVGTVGNAASGAVGTVTGA 824
Query: 131 IGWW*D--GGGGGCSMVAATVEGEGNGGGGGD 160
+G D G GG V TV G G GGG+
Sbjct: 825 LGGVGDPTGSLGG---VVGTVTGALGGIGGGN 853
Score = 38.9 bits (89), Expect = 0.072
Identities = 42/137 (30%), Positives = 51/137 (36%), Gaps = 25/137 (18%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G+GGG G G + V T V A+ G G GGG GG G V TV G G
Sbjct: 946 GIGGGTGGLGGVVGTVANTATGAVGALTGALG---GVGGGTGGLGGVVGTVANTATGAVG 1002
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIG------WW*DGGGGG 141
+ + A+ GG G G+GG VV + +G GG GG
Sbjct: 1003 T----LTGAL----------GGVGGGTGG--VVGTVANTATGAVGTLTGALGGVGGGTGG 1046
Query: 142 CSMVAATVEGEGNGGGG 158
V TV G G
Sbjct: 1047 LGGVVGTVANTATGAVG 1063
Score = 38.5 bits (88), Expect = 0.094
Identities = 43/139 (30%), Positives = 52/139 (36%), Gaps = 26/139 (18%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
GVGGG G G VV T+ +G GG GGG GG G V TV G
Sbjct: 1071 GVGGGTGGLGG----VVGTVANTATGAVGTLTGALGGVGGGAGGLGGVVGTVANTATGAV 1126
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGG-DRVVAAMVVVVLAMIG------WW*DGGG 139
G+ + A+ GG G G+GG VV + +G GG
Sbjct: 1127 GT----LTGAL----------GGVGGGTGGLGGVVGTVANTATGAVGTLTGALGGVGGGT 1172
Query: 140 GGCSMVAATVEGEGNGGGG 158
GG V +TV G G
Sbjct: 1173 GGLGGVVSTVANTATGAVG 1191
Score = 37.7 bits (86), Expect = 0.16
Identities = 43/140 (30%), Positives = 52/140 (36%), Gaps = 24/140 (17%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG--GGGGGGCGRVAATVDGGGNGG 85
G+GGG G L VV T+ +G GG GGG GG G V TV +G
Sbjct: 577 GIGGGNPTGG--LGGVVGTVANTATGAVGTLTGALGGVGGGGTGGLGGVVGTVGNAASGA 634
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGG-DRVVAAMVVVVLAMIG------WW*DGG 138
G+ V A+ G GG G+GG VV + +G GG
Sbjct: 635 VGT----VTGALG---------GVGGGGTGGLGGVVGTVANTATGAVGTLTGALGGVGGG 681
Query: 139 GGGCSMVAATVEGEGNGGGG 158
GG V TV G G
Sbjct: 682 TGGLGGVVGTVANTATGAVG 701
Score = 36.6 bits (83), Expect = 0.36
Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 26/139 (18%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
GVGGG G G +V T+ +G GG GGG GG G V TV G
Sbjct: 882 GVGGGTGGLGG----IVGTVANTATGAVGTLTGALGGIGGGTGGLGGVVGTVANTATGAV 937
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGG-DRVVAAMVVVVLAMIG------WW*DGGG 139
G+ + A+ GG G G+GG VV + +G GG
Sbjct: 938 GT----LTGAL----------GGIGGGTGGLGGVVGTVANTATGAVGALTGALGGVGGGT 983
Query: 140 GGCSMVAATVEGEGNGGGG 158
GG V TV G G
Sbjct: 984 GGLGGVVGTVANTATGAVG 1002
Score = 35.8 bits (81), Expect = 0.61
Identities = 42/139 (30%), Positives = 50/139 (35%), Gaps = 29/139 (20%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
GVGGG G VV T+ +G GG GGG GG G V TV G
Sbjct: 1010 GVGGGTGG-------VVGTVANTATGAVGTLTGALGGVGGGTGGLGGVVGTVANTATGAV 1062
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGG-DRVVAAMVVVVLAMIG------WW*DGGG 139
G+ + A+ GG G G+GG VV + +G GG
Sbjct: 1063 GT----LTGAL----------GGVGGGTGGLGGVVGTVANTATGAVGTLTGALGGVGGGA 1108
Query: 140 GGCSMVAATVEGEGNGGGG 158
GG V TV G G
Sbjct: 1109 GGLGGVVGTVANTATGAVG 1127
Score = 34.3 bits (77), Expect = 1.8
Identities = 48/171 (28%), Positives = 61/171 (35%), Gaps = 42/171 (24%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GG-GGGGGGCGRVAATVDGGGNGGG 86
GVGGG G G VV T+ +G GG GGG GG G V +TV G
Sbjct: 1135 GVGGGTGGLGG----VVGTVANTATGAVGTLTGALGGVGGGTGGLGGVVSTVANTATGAV 1190
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVV-----VVLAMIGWW*DGG--- 138
G+ + GG G +GG + V VV A+ G +GG
Sbjct: 1191 GTLTGTL--------------GGVGGATGGLGSIVGTVANTGTGVVNAVTGVAGNGGALI 1236
Query: 139 ----------GGGCSMVAAT-----VEGEGNGGGGGDRVVVVVLVVAVVTI 174
GG + AAT V G G G + L AV ++
Sbjct: 1237 TPITSIVGNLGGSLPVGAATGAIGAVSGAVTGVAGSGTAAITPLASAVTSL 1287
>ref|YP_177693.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|41352733|emb|CAE55243.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium tuberculosis H37Rv]
gi|7476119|pir||E70983 hypothetical glycine-rich protein
Rv0124 - Mycobacterium tuberculosis (strain H37RV)
Length = 487
Score = 52.8 bits (125), Expect = 5e-06
Identities = 47/141 (33%), Positives = 55/141 (38%), Gaps = 31/141 (21%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GG G G W W GG GG GG G V A V GG G G
Sbjct: 160 IGHGGSGGAGGSGAAGGAGGH--------GGWLWGNGGVGGSGGAG-VGAGVAGGHGGAG 210
Query: 87 GSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMI-------GW-W*DGG 138
G+ + W GGG G+GG+ A +V + GW + DGG
Sbjct: 211 GAAGL--------------WGAGGGGGNGGNGADANIVSGGDGGLGGAGGGGGWLYGDGG 256
Query: 139 GGGCSMVAATVEGEGNGGGGG 159
GG A G G GG GG
Sbjct: 257 AGGHGGQGAIGLGGGAGGDGG 277
Score = 48.1 bits (113), Expect = 1e-04
Identities = 57/171 (33%), Positives = 60/171 (34%), Gaps = 53/171 (30%)
Query: 21 GWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG 80
GW W G GG GG G + VA G W GGGGG GG G A V G
Sbjct: 182 GWLW---GNGGVGGSGGAGVGAGVAGGHGGAGGAAGLWGA--GGGGGNGGNGADANIVSG 236
Query: 81 -----GGNGGGGSDRVMVVVAIWWWLWCQWW*GGG--------GSGSGGDRVVAAMVVVV 127
GG GGGG WL+ GG G G+GGD
Sbjct: 237 GDGGLGGAGGGGG-----------WLYGDGGAGGHGGQGAIGLGGGAGGDGGQGG----- 280
Query: 128 LAMIGWW*DGGGGG----------------CSMVAATVEGE--GNGGGGGD 160
A G W GG GG M AA G GNGG GGD
Sbjct: 281 -AGRGLWGTGGAGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGD 330
Score = 47.8 bits (112), Expect = 2e-04
Identities = 36/103 (34%), Positives = 41/103 (38%), Gaps = 14/103 (13%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGG-GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVA 121
G G GG G A + GG+GG GGS WLW G GG G G V
Sbjct: 145 GAAGQAGGAGGPAGLIGHGGSGGAGGSGAAGGAGGHGGWLW-----GNGGVGGSGGAGVG 199
Query: 122 AMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
A V GG GG + + G GNGG G D +V
Sbjct: 200 AGVAGG--------HGGAGGAAGLWGAGGGGGNGGNGADANIV 234
Score = 43.5 bits (101), Expect = 0.003
Identities = 43/146 (29%), Positives = 52/146 (35%), Gaps = 30/146 (20%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G GG GGDS A G + GG GG GG T GG G GG
Sbjct: 356 GAGGAGGDSS------FANGAAGGAGGAGGHLFGNGGSGGHGGAVTAGNTGIGGAGGVGG 409
Query: 88 SDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAA 147
R++ GG G+GGDR A ++G DGG GG
Sbjct: 410 DARLIG--------------HGGAGGAGGDRAGA--------LVGR--DGGPGGNGGAGG 445
Query: 148 TVEGEGNGGGGGDRVVVVVLVVAVVT 173
+ G G G G + V +VT
Sbjct: 446 QLYGNGGDGAPGTGGTLQAAVSGLVT 471
Score = 42.4 bits (98), Expect = 0.007
Identities = 45/146 (30%), Positives = 52/146 (34%), Gaps = 42/146 (28%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
+G GG GGD G V A+ GG G GG G A + GG GG
Sbjct: 322 IGNGGAGGDGG-----VGAS----------------GGVAGVGGAGGNAMLIGHGGAGGA 360
Query: 87 GSDRVMVVVA------IWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGG 140
G D A L+ G GGSG G V A + GG G
Sbjct: 361 GGDSSFANGAAGGAGGAGGHLF-----GNGGSGGHGGAVTAGNTGI----------GGAG 405
Query: 141 GCSMVAATVEGEGNGGGGGDRVVVVV 166
G A + G GG GGDR +V
Sbjct: 406 GVGGDARLIGHGGAGGAGGDRAGALV 431
Score = 38.5 bits (88), Expect = 0.094
Identities = 45/154 (29%), Positives = 54/154 (34%), Gaps = 26/154 (16%)
Query: 16 IGWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGR-V 74
+G G W G GG GG G + + GG GG GG GR +
Sbjct: 241 LGGAGGGGGWLYGDGGAGGHGGQGAIGLGGGA---------------GGDGGQGGAGRGL 285
Query: 75 AATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GG--GGSGSGGDRVVAAMVVVV----- 127
T GG+GG G + + GG G G+GGD V A V
Sbjct: 286 WGTGGAGGHGGQGGGTGGPPLPGQAGMGAAGGAGGLIGNGGAGGDGGVGASGGVAGVGGA 345
Query: 128 ---LAMIGWW*DGGGGGCSMVAATVEGEGNGGGG 158
+IG GG GG S A G G GG
Sbjct: 346 GGNAMLIGHGGAGGAGGDSSFANGAAGGAGGAGG 379
Score = 34.3 bits (77), Expect = 1.8
Identities = 32/107 (29%), Positives = 42/107 (38%), Gaps = 33/107 (30%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATV--DGGGNGG 85
G+GG GG GD +IG GG GG G R A V DGG G
Sbjct: 400 GIGGAGGVGGD-------------ARLIGH------GGAGGAGGDRAGALVGRDGGPGGN 440
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIG 132
GG+ + + GG G+ G + AA+ +V A+ G
Sbjct: 441 GGAGGQL------------YGNGGDGAPGTGGTLQAAVSGLVTALFG 475
>ref|NP_298108.1| endo-1,4-beta-glucanase [Xylella fastidiosa 9a5c]
gi|9105718|gb|AAF83628.1| endo-1,4-beta-glucanase
[Xylella fastidiosa 9a5c] gi|11360928|pir||E82759
endo-1,4-beta-glucanase XF0818 [imported] - Xylella
fastidiosa (strain 9a5c)
Length = 592
Score = 52.8 bits (125), Expect = 5e-06
Identities = 37/114 (32%), Positives = 44/114 (38%), Gaps = 22/114 (19%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGG GGG G + GGG+G GG GGGSGSGG
Sbjct: 431 GGGGSGGGSGSGGGSGSGGGSGSGGGSG-----------------SGGGSGSGGGGGSGG 473
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVTIEW 176
G GGG G + + G G GGGG D + V +V +W
Sbjct: 474 G-----GSGGGGGSGGGSGSGGGSGSGGGSGTGGGGSDPTKSKISVNTIVDSDW 522
Score = 48.5 bits (114), Expect = 9e-05
Identities = 34/97 (35%), Positives = 39/97 (40%), Gaps = 21/97 (21%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGG GGG G + GGG+G GG GGGSGSGG
Sbjct: 377 GGGGSGGGSGSGGGSGSGGGSGSGGGSG-----------------SGGGSGSGGGSGSGG 419
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
G GGGGG + + G G+GGG G
Sbjct: 420 ----GSGSGGGSGSGGGGGSGGGSGSGGGSGSGGGSG 452
Score = 45.8 bits (107), Expect = 6e-04
Identities = 32/99 (32%), Positives = 37/99 (37%), Gaps = 33/99 (33%)
Query: 61 W*GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVV 120
W G G GGG G + GGG+G GG GGGSGSGG
Sbjct: 369 WNGKDGSGGGGGSGGGSGSGGGSGSGGGSG-----------------SGGGSGSGGGSG- 410
Query: 121 AAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGG 159
GGG G + + G G+GGGGG
Sbjct: 411 ---------------SGGGSGSGGGSGSGGGSGSGGGGG 434
Score = 35.8 bits (81), Expect = 0.61
Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 23/64 (35%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGN--GG 85
G GGGGG G GGGG GGG G + GGG+ GG
Sbjct: 464 GSGGGGGSGGGGSG---------------------GGGGSGGGSGSGGGSGSGGGSGTGG 502
Query: 86 GGSD 89
GGSD
Sbjct: 503 GGSD 506
>gb|EAK81623.1| hypothetical protein UM00873.1 [Ustilago maydis 521]
gi|49068398|ref|XP_398488.1| hypothetical protein
UM00873.1 [Ustilago maydis 521]
Length = 1074
Score = 52.8 bits (125), Expect = 5e-06
Identities = 48/143 (33%), Positives = 59/143 (40%), Gaps = 25/143 (17%)
Query: 30 GGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGGSD 89
GG G + D V V A V A+ GGGGGGG G VA GG GGGG
Sbjct: 780 GGVGRGTADGPVGVCAAATVDAAAL----GLAVAGGGGGGGGGAVAFRRPAGGAGGGGGA 835
Query: 90 RVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVL-----------AMIGWW*DGG 138
+V + GG G GG A V+ +L ++G GG
Sbjct: 836 SGAPLVGLPA--------GGAGGAGGGGGAGGASVLGLLGGGGAGGAAQDVVLGRPGGGG 887
Query: 139 GGGC--SMVAATVEGEGNGGGGG 159
GGG +++A G G GGGGG
Sbjct: 888 GGGAMGTLLAGLTAGGGGGGGGG 910
Score = 51.6 bits (122), Expect = 1e-05
Identities = 45/138 (32%), Positives = 54/138 (38%), Gaps = 35/138 (25%)
Query: 28 GVGGGGGDSGDRLVVVV-------ATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG 80
G GGGGG G ++ ++ A VV+ GGGGGGG G + A +
Sbjct: 850 GAGGGGGAGGASVLGLLGGGGAGGAAQDVVLGRP--------GGGGGGGAMGTLLAGLTA 901
Query: 81 GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGG 140
GG GGGG + A GGGG+ G AA DGGGG
Sbjct: 902 GGGGGGGGGAPLGAAAAGLL-------GGGGTPLDGKEGAAA-------------DGGGG 941
Query: 141 GCSMVAATVEGEGNGGGG 158
G A G GGGG
Sbjct: 942 GPRGGAGRPVAGGGGGGG 959
Score = 50.8 bits (120), Expect = 2e-05
Identities = 49/150 (32%), Positives = 57/150 (37%), Gaps = 49/150 (32%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCG--RVAATVDGGGNGG 85
G GGGGG SG LV + A GG GGGGG G V + GGG GG
Sbjct: 828 GAGGGGGASGAPLVGLPAGGA--------------GGAGGGGGAGGASVLGLLGGGGAGG 873
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMV 145
D V+ G G G GG AM ++ + GGGGG +
Sbjct: 874 AAQDVVL---------------GRPGGGGGG----GAMGTLLAGLTAGGGGGGGGGAPLG 914
Query: 146 AATV-------------EGEG-NGGGGGDR 161
AA EG +GGGGG R
Sbjct: 915 AAAAGLLGGGGTPLDGKEGAAADGGGGGPR 944
Score = 44.7 bits (104), Expect = 0.001
Identities = 41/110 (37%), Positives = 45/110 (40%), Gaps = 24/110 (21%)
Query: 63 GGGGGGGGC----GRVAATVDGGGNG------GGGSDRVMVVVAIWWWLWCQWW*GGGGS 112
GGGGGGGG G V A DG G G GG + +A GG G
Sbjct: 736 GGGGGGGGAADRRGGVGAPEDGAGGGTRTVRDGGAPNPAAEAIA-----------GGVGR 784
Query: 113 GSGGDRV-VAAMVVVVLAMIGW--W*DGGGGGCSMVAATVEGEGNGGGGG 159
G+ V V A V A +G GGGGG VA G GGGGG
Sbjct: 785 GTADGPVGVCAAATVDAAALGLAVAGGGGGGGGGAVAFRRPAGGAGGGGG 834
Score = 38.1 bits (87), Expect = 0.12
Identities = 34/109 (31%), Positives = 39/109 (35%), Gaps = 48/109 (44%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGC---------------- 71
G GGGGG G L + A GGGGGGGG
Sbjct: 884 GGGGGGGAMGTLLAGLTAG----------------GGGGGGGGAPLGAAAAGLLGGGGTP 927
Query: 72 --GRVAATVDGGGNGG-GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGD 117
G+ A DGGG G GG+ R + GGGG G+ GD
Sbjct: 928 LDGKEGAAADGGGGGPRGGAGRPVAG-------------GGGGGGAAGD 963
Score = 38.1 bits (87), Expect = 0.12
Identities = 38/114 (33%), Positives = 44/114 (38%), Gaps = 26/114 (22%)
Query: 63 GGGGGGGGCGRV----AATVD---------GGGNGGGGSDRVMVVVAIWWWLWCQWW*GG 109
GG G G G V AATVD GGG GGGG A
Sbjct: 780 GGVGRGTADGPVGVCAAATVDAAALGLAVAGGGGGGGGGAVAFRRPA------------- 826
Query: 110 GGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVV 163
GG+G GG A +V + G GGG G + V + G G GG D V+
Sbjct: 827 GGAGGGGGASGAPLVGLPAGGAGGAGGGGGAGGASVLGLLGGGGAGGAAQDVVL 880
>ref|NP_102641.1| hypothetical protein mll0950 [Mesorhizobium loti MAFF303099]
gi|14021816|dbj|BAB48427.1| mll0950 [Mesorhizobium loti
MAFF303099]
Length = 3659
Score = 52.4 bits (124), Expect = 6e-06
Identities = 56/188 (29%), Positives = 71/188 (36%), Gaps = 51/188 (27%)
Query: 27 VGVGGGGGDSGDRLVVVV----------ATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAA 76
+GVGGGGG SGD VV V A+ V + I GGGGG G VAA
Sbjct: 2684 IGVGGGGGSSGDGGVVTVNNHGDITTVSASSVAIFAESI--------GGGGGTGAMSVAA 2735
Query: 77 TV-----------DGGGNGGGG-------SDRVMVVVAIW-WWLWCQWW*GGGGSGSGGD 117
+ DGG NG GG SD ++ + Q GGGG+G
Sbjct: 2736 SPAPGAFTFGIGGDGGANGKGGNVNVTNFSDGIIHTQGFGSTGIMAQSVGGGGGAGGASY 2795
Query: 118 RVVAAMVVVVLAMIGWW*DGGGGGC--------------SMVAATVEGEGNGGGGGDRVV 163
V + +A+ G GG GG + VA + G GGG G +
Sbjct: 2796 SVSGGPPGLAIALGGKGAAGGDGGIVTVINNGAMQLDGDNSVAIFAQSVGGGGGSGGTAI 2855
Query: 164 VVVLVVAV 171
+ V V
Sbjct: 2856 AAAIGVPV 2863
Score = 46.2 bits (108), Expect = 5e-04
Identities = 50/165 (30%), Positives = 63/165 (37%), Gaps = 41/165 (24%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVA---MIGWWWWW*GGGGGGGGCGRVAATVDG--- 80
V VGG G SGD V V ++ ++ G GGGGG GG AAT+ G
Sbjct: 1815 VSVGGSGAGSGDGKTVNVTSVDNILTGGNGANGILAQSVGGGGGNGGFS-FAATIKGSLG 1873
Query: 81 -------------GGNGGGGSDRVMVVVAIWWWLWCQWW*G--------GGGSGSGGDRV 119
GG G G D V V + GGG G+GG V
Sbjct: 1874 KNPSKNGAVSVSLGGGAGSGGDAEKVTVDSTGIIQTSGNKAFGVLAQSVGGGGGTGGLSV 1933
Query: 120 VAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
AA+ + G G + + A V GEG GGG G V++
Sbjct: 1934 AAALNL-------------GEGGNQITAAVGGEGGGGGTGGEVLL 1965
Score = 45.4 bits (106), Expect = 8e-04
Identities = 44/150 (29%), Positives = 63/150 (41%), Gaps = 20/150 (13%)
Query: 27 VGVGGGGGDSGDRLVVVVAT---MVVVVVAMIGWWWWW*GGGGGGGGC---------GRV 74
+ +GG G++ D +V V T + G + GG GG GG G
Sbjct: 636 LAMGGAAGNASDGNIVTVETAGSLTTYGQGSRGIFAQSIGGTGGNGGAAIAVAVNATGTF 695
Query: 75 AATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW 134
AA + GGNGG G +V V+ + G+ +GG +VA V G+
Sbjct: 696 AAAIGIGGNGGAGGASKLVTVSSLSDI------STAGNNAGG--IVAQSVGGGGGNGGYA 747
Query: 135 *DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
G GG +A + G+G GGG G V+V
Sbjct: 748 IGGAIGGAVGIAVNIGGKGAGGGAGADVIV 777
Score = 44.7 bits (104), Expect = 0.001
Identities = 50/159 (31%), Positives = 64/159 (39%), Gaps = 37/159 (23%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG------ 80
VGVGG G G+ V V + +V G GGGGG G A T+ G
Sbjct: 1617 VGVGGSGKGGGNADTVTVTSTGNIVTLKNGSNGILAQSVGGGGGNGGAAVTIAGSGQKAA 1676
Query: 81 -----GGNGG-GGSDRVMVVVAIWW---------WLWCQWW*GGGGSGSGGDRVVAAMVV 125
GG+G GG+ +++ V I + Q GGG G+GG + MVV
Sbjct: 1677 AAVSVGGSGAKGGTSQLVTVNNIGTIDTTGDKANGILAQSI--GGGGGTGGFAISGEMVV 1734
Query: 126 VVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
DG GG A +V G G G G RV+V
Sbjct: 1735 ----------DGAGG----AAVSVGGNGGTGQDGGRVIV 1759
Score = 43.1 bits (100), Expect = 0.004
Identities = 45/158 (28%), Positives = 57/158 (35%), Gaps = 35/158 (22%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*G--GGGGGGGCGRVAATVDG---- 80
V VGG G GD VV V + + G + GGGGG G G +A T+ G
Sbjct: 1492 VAVGGSGSSGGDAAVVTVTSHGNIETDGDGSHAIFAQSVGGGGGNGGGAIAGTLTGEGTG 1551
Query: 81 ------GGNGGGGSDRVMVVVAIWWWLWCQWW*G--------GGGSGSGGDRVVAAMVVV 126
GG+G G + V V+ L + GGG G+GG A+
Sbjct: 1552 SLAVGVGGSGDNGGNAKAVTVSSTGDLRTEGLKADGILAQSIGGGGGNGGFSGALAITT- 1610
Query: 127 VLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVV 164
G + V G G GGG D V V
Sbjct: 1611 --------------GAGAIGVGVGGSGKGGGNADTVTV 1634
Score = 43.1 bits (100), Expect = 0.004
Identities = 43/170 (25%), Positives = 63/170 (36%), Gaps = 35/170 (20%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGGG 87
G G GG G V ++ +G + GGGGG GG ++A GG G G
Sbjct: 2454 GSGKAGGTGGHVTVNNYGGILTHADDSVGIFAQSIGGGGGAGGSLGISAIAVGGSGGASG 2513
Query: 88 SDRVMVVV---------AIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGG 138
S + VV + + Q GGGGSG G + + + ++++ GG
Sbjct: 2514 SGGQVDVVNNAMIETHGIDSYAIQAQSVGGGGGSGGGKNGGITGSIPALISI------GG 2567
Query: 139 GGGCSMVAATV--------------------EGEGNGGGGGDRVVVVVLV 168
GG S + V + G GGG G R + + V
Sbjct: 2568 AGGSSGIGGIVNVTNNNSLHTYGAGADGINAQSIGGGGGSGGRAIGFIAV 2617
Score = 40.8 bits (94), Expect = 0.019
Identities = 45/161 (27%), Positives = 63/161 (38%), Gaps = 33/161 (20%)
Query: 27 VGVGGGGGDSGDRLVVVVATM----------VVVVVAMIGWWWWW*GGGGGGGGCGRVAA 76
VG+GG G G V V + + ++ +G GGGG GG +A
Sbjct: 1093 VGLGGSGAGGGSAKTVRVTSTGDITTYGDQAIGILAQSVG------GGGGNGGSTVSLAL 1146
Query: 77 TVDGG------GNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAM 130
D G G GG + + V V + G G SGG R A ++ ++
Sbjct: 1147 AKDAGIGVALGGKGGAAGNGLDVTVISTGNIST-----GAGFISGGVRGTGAAGILAQSV 1201
Query: 131 IGWW*DGG-----GGGCSMVAATVEGEGNGGGGGDRVVVVV 166
G +GG GGG S+ G G+G GGG +V V
Sbjct: 1202 GGGGGNGGFAGTLGGGKSIAVGVAFG-GSGAGGGSADIVKV 1241
Score = 40.0 bits (92), Expect = 0.032
Identities = 36/139 (25%), Positives = 48/139 (33%), Gaps = 38/139 (27%)
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGN---GG 85
VGGGGG+ G + + + + VA+ GG G G TV GN G
Sbjct: 1469 VGGGGGNGGFAIALAGSKDMAASVAV---------GGSGSSGGDAAVVTVTSHGNIETDG 1519
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMV 145
GS + GGG G+GG + + G G +
Sbjct: 1520 DGSHAIFAQSV------------GGGGGNGGGAIAGTLT--------------GEGTGSL 1553
Query: 146 AATVEGEGNGGGGGDRVVV 164
A V G G+ GG V V
Sbjct: 1554 AVGVGGSGDNGGNAKAVTV 1572
Score = 39.3 bits (90), Expect = 0.055
Identities = 51/171 (29%), Positives = 67/171 (38%), Gaps = 51/171 (29%)
Query: 27 VGVGGGGGDSGDRL-VVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDG-GGNG 84
V +GG GG +G+ L V V++T + A + GG G G G +A +V G GGNG
Sbjct: 1154 VALGGKGGAAGNGLDVTVISTGNISTGA-----GFISGGVRGTGAAGILAQSVGGGGGNG 1208
Query: 85 G-----GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVV------------VV 127
G GG + V VA GG G+G G +V ++
Sbjct: 1209 GFAGTLGGGKSIAVGVAF----------GGSGAGGGSADIVKVTSTGNISTNFDNSSGII 1258
Query: 128 LAMIGWW*DGGGGGCSMVAAT--------------VEGEGNGGGGGDRVVV 164
IG GGG G VA T + G+G GG G V V
Sbjct: 1259 AQSIG---GGGGNGGFSVAVTGALGDPDAATASVAIGGKGGVGGVGKDVTV 1306
Score = 39.3 bits (90), Expect = 0.055
Identities = 32/105 (30%), Positives = 41/105 (38%), Gaps = 11/105 (10%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGGG GG + G G GG RV V A G +G G V +
Sbjct: 498 GGGGGNGGTSGGLFSAGGKGGAGGNGARVTVTNA-----------GDIETGKNGAASVNS 546
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVL 167
+ ++ G +GGG + +V G GG GG V VL
Sbjct: 547 AGIFAQSVGGGGGNGGGAFSGGIGFSVAIGGAGGSGGTSGAVEVL 591
Score = 38.9 bits (89), Expect = 0.072
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 31/117 (26%)
Query: 66 GGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVV 125
GGGGG G A ++ G G GGGG + V+I GG GSGS + V
Sbjct: 1408 GGGGGSGGFAGSL-GVGLGGGG-----LGVSIG---------GGAGSGSTAETVTVTSYN 1452
Query: 126 VVL-------AMIGWW*DGGGG---------GCSMVAATVEGEGNGGGGGDRVVVVV 166
+L ++ GGGG G +AA+V G+G GGD VV V
Sbjct: 1453 NILTGGKDSFGIMAQSVGGGGGNGGFAIALAGSKDMAASVAVGGSGSSGGDAAVVTV 1509
Score = 38.1 bits (87), Expect = 0.12
Identities = 50/179 (27%), Positives = 60/179 (32%), Gaps = 73/179 (40%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGC--------------- 71
+ VGG GGD G+ G GGGG
Sbjct: 2615 IAVGGKGGDVGNGTTA--------------------GSNGGGGAVTVNNNANGTITVEGI 2654
Query: 72 ---GRVAATVDGGGNGGGGSDRVMVV-VAIWWWLWCQWW*GGGGSGSGGD---------- 117
G A +V GG GGG+ V +V VAI GGG GS GD
Sbjct: 2655 GAHGIFAQSVGAGGGSGGGAFGVSIVPVAIG---------VGGGGGSSGDGGVVTVNNHG 2705
Query: 118 ---RVVAAMVVVVLAMIGWW*DGGGGGCSMVAAT---------VEGEGNGGGGGDRVVV 164
V A+ V + IG GGG G VAA+ + G+G G G V V
Sbjct: 2706 DITTVSASSVAIFAESIG---GGGGTGAMSVAASPAPGAFTFGIGGDGGANGKGGNVNV 2761
Score = 37.7 bits (86), Expect = 0.16
Identities = 44/159 (27%), Positives = 55/159 (33%), Gaps = 44/159 (27%)
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNG---- 84
VGGGGG+ G + V + G GG GG G V D
Sbjct: 554 VGGGGGNGGGAFSGGIGFSVAIG-----------GAGGSGGTSGAVEVLRDANDTAYSII 602
Query: 85 --GGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGC 142
G SD V GGG G+GG V A+ V+ LAM G + G
Sbjct: 603 THGDQSDAVFAQSI------------GGGGGNGGFSVSGAVGVLALAMGGAAGNASDGNI 650
Query: 143 SMV----AATVEGEGN-----------GGGGGDRVVVVV 166
V + T G+G+ GG GG + V V
Sbjct: 651 VTVETAGSLTTYGQGSRGIFAQSIGGTGGNGGAAIAVAV 689
Score = 37.7 bits (86), Expect = 0.16
Identities = 42/136 (30%), Positives = 54/136 (38%), Gaps = 21/136 (15%)
Query: 27 VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGNGGG 86
V VGG GG D V+V + + +A GG G A +V GGG GG
Sbjct: 1742 VSVGGNGGTGQDGGRVIVNSNIGTTLANNNATIHTVGGDSNG----IFAQSVGGGGGDGG 1797
Query: 87 GSDRVMVV-----VAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGG 141
S V V AI + GG G+GSG + V V + GG G
Sbjct: 1798 FSGAVSVTGQNAKAAIGVSV------GGSGAGSGDGKTVNVTSVDNIL------TGGNGA 1845
Query: 142 CSMVAATVEGEGNGGG 157
++A +V G G GG
Sbjct: 1846 NGILAQSVGGGGGNGG 1861
Score = 37.7 bits (86), Expect = 0.16
Identities = 38/130 (29%), Positives = 47/130 (35%), Gaps = 39/130 (30%)
Query: 63 GGGGGGGG--------CGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGS 114
GGGGG GG G + A+V GG+GG G V V G +
Sbjct: 1008 GGGGGNGGFSVAGTFTTGALGASVAVGGSGGSGQSAGEVTVT-----------SAGNIQT 1056
Query: 115 GGDRVVAAMVVVVLAMIGWW*DGGGGG-----------CSMVAATVEGEGNGGGGGDRVV 163
GD+ + M V GGGGG V+A V G+G GGG
Sbjct: 1057 HGDQSIGIMAQSV---------GGGGGNGGFAGAGAITLQGVSAAVGLGGSGAGGGSAKT 1107
Query: 164 VVVLVVAVVT 173
V V +T
Sbjct: 1108 VRVTSTGDIT 1117
Score = 37.7 bits (86), Expect = 0.16
Identities = 41/141 (29%), Positives = 50/141 (35%), Gaps = 46/141 (32%)
Query: 31 GGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGG-----NGG 85
GGGG SG R + +A GG GG G G A + GGG N
Sbjct: 2602 GGGGGSGGRAIGFIAV----------------GGKGGDVGNGTTAGSNGGGGAVTVNNNA 2645
Query: 86 GGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGGGGCSMV 145
G+ V + A ++ Q GGGSG GG G S+V
Sbjct: 2646 NGTITVEGIGA--HGIFAQSVGAGGGSG-----------------------GGAFGVSIV 2680
Query: 146 AATVEGEGNGGGGGDRVVVVV 166
+ G GG GD VV V
Sbjct: 2681 PVAIGVGGGGGSSGDGGVVTV 2701
Score = 37.4 bits (85), Expect = 0.21
Identities = 44/157 (28%), Positives = 57/157 (36%), Gaps = 42/157 (26%)
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGG------ 82
VGGGGG G V + + GG G GG G + ++ G
Sbjct: 2784 VGGGGGAGGASYSVSGGPPGLAIAL---------GGKGAAGGDGGIVTVINNGAMQLDGD 2834
Query: 83 ----------NGGGGSDRVMVVVAIWWWLWCQWW*GG--GGSGSGGDRVVAAMVVVVLA- 129
GGGGS + AI ++ GG G +G GGD V + L
Sbjct: 2835 NSVAIFAQSVGGGGGSGGTAIAAAIGVPVFI----GGDTGATGKGGDVTVTNTGQIRLTG 2890
Query: 130 --MIGWW*D--GGGGGC------SMVAATVEGEGNGG 156
+G + GGGGG +V A G GNGG
Sbjct: 2891 NGSVGIFAQSVGGGGGVVTAGTDGIVQAVAGGSGNGG 2927
Score = 37.4 bits (85), Expect = 0.21
Identities = 36/122 (29%), Positives = 49/122 (39%), Gaps = 21/122 (17%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGG-GGSDRVMVVVAIWWW------LWCQWW*GGGGSGS- 114
GGGG GG G +++ GGNGG GG +V I W + Q GGGG G
Sbjct: 336 GGGGSAGGFGLFSSSGGSGGNGGNGGIVQVTNNANIATWGNNSQGILAQTIGGGGGDGGS 395
Query: 115 -------------GGDRVVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDR 161
GG+ A +V V + G G ++A ++ G G GG
Sbjct: 396 NFGLFASGGSGSLGGNGGPANVVTVGVTNSGAIVTHGQESNGILAQSIGGGGGNGGNSGG 455
Query: 162 VV 163
+V
Sbjct: 456 LV 457
Score = 37.4 bits (85), Expect = 0.21
Identities = 50/169 (29%), Positives = 63/169 (36%), Gaps = 38/169 (22%)
Query: 27 VGVGGGGGDSGDRLVVVVA---TMVVVVVAMIGWWWWW*GGGGGGGG-----------CG 72
+ +GG GG SG +V V ++ G GGGGG GG G
Sbjct: 2563 ISIGGAGGSSGIGGIVNVTNNNSLHTYGAGADGINAQSIGGGGGSGGRAIGFIAVGGKGG 2622
Query: 73 RVAATVDGGGNGGGGSDRV-------MVVVAIW-WWLWCQWW*GGGGSGSGGDRVVAAMV 124
V G NGGGG+ V + V I ++ Q GGGSG G V ++V
Sbjct: 2623 DVGNGTTAGSNGGGGAVTVNNNANGTITVEGIGAHGIFAQSVGAGGGSGGGAFGV--SIV 2680
Query: 125 VVVLAMIGWW*DGGGGG--------------CSMVAATVEGEGNGGGGG 159
V + + G G GG S VA E G GGG G
Sbjct: 2681 PVAIGVGGGGGSSGDGGVVTVNNHGDITTVSASSVAIFAESIGGGGGTG 2729
Score = 36.6 bits (83), Expect = 0.36
Identities = 42/164 (25%), Positives = 61/164 (36%), Gaps = 47/164 (28%)
Query: 27 VGVGGGGGDSGDRLVVVVA--------TMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATV 78
VG GG G S + V A + ++ +G GGGG GG G A T+
Sbjct: 1033 VGGSGGSGQSAGEVTVTSAGNIQTHGDQSIGIMAQSVG------GGGGNGGFAGAGAITL 1086
Query: 79 DG-------GGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMI 131
G GG+G GG V V G + GD+ + ++ +
Sbjct: 1087 QGVSAAVGLGGSGAGGGSAKTVRVT-----------STGDITTYGDQAIG----ILAQSV 1131
Query: 132 GWW*DGGGGGCSMVAATVEGE--------GNGGGGGDRVVVVVL 167
G GGG G S V+ + + G GG G+ + V V+
Sbjct: 1132 G---GGGGNGGSTVSLALAKDAGIGVALGGKGGAAGNGLDVTVI 1172
Score = 35.8 bits (81), Expect = 0.61
Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 28/138 (20%)
Query: 28 GVGGGGGDSGDRLV--------VVVATMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVD 79
G GGGGGD+G V V ++ + GGGGG G V +V
Sbjct: 898 GTGGGGGDAGTATVNNGKKVGNTVTHNNILTIEDNSTGILAQSIGGGGGNGGFAVTLSVS 957
Query: 80 GGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DGGG 139
G G GG+ V V GG G+ G + V +A G DG
Sbjct: 958 GSYEGAGGAAAVSV--------------GGSGATGGVGKDVFVTSYGNIATYGKQSDG-- 1001
Query: 140 GGCSMVAATVEGEGNGGG 157
++A ++ G G GG
Sbjct: 1002 ----ILAQSIGGGGGNGG 1015
Score = 35.0 bits (79), Expect = 1.0
Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 8 AAVAMKVVIGWWWGWQWW*VGVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGG 67
AA+ + V IG G G G GD V + + +G + GGGGG
Sbjct: 2857 AAIGVPVFIG----------GDTGATGKGGDVTVTNTGQIRLTGNGSVGIFAQSVGGGGG 2906
Query: 68 ---GGGCGRVAATVDGGGNGGGGSDRVMVVVAIWW----WLWCQWW*GGGGSGS------ 114
G G V A G GNGG + V + I ++ Q GGGG G
Sbjct: 2907 VVTAGTDGIVQAVAGGSGNGGVVTINSNVAMLITGDNSVGVFGQSIGGGGGVGGFSGNYL 2966
Query: 115 GGDRVVAAMVVVVLAMIGWW*DGGGGG 141
G D+V + + +A G+ GGGG
Sbjct: 2967 GLDQVQSTSSKMAMAPQGFMGSAGGGG 2993
Score = 34.3 bits (77), Expect = 1.8
Identities = 30/103 (29%), Positives = 36/103 (34%), Gaps = 18/103 (17%)
Query: 63 GGGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAA 122
GGGGG GG ++ G G GG V V + GG A
Sbjct: 2437 GGGGGTGGGAGGLLSLGGSGKAGGTGGHVTV------------------NNYGGILTHAD 2478
Query: 123 MVVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVV 165
V + A G GG + A V G G G G +V VV
Sbjct: 2479 DSVGIFAQSIGGGGGAGGSLGISAIAVGGSGGASGSGGQVDVV 2521
Score = 34.3 bits (77), Expect = 1.8
Identities = 44/145 (30%), Positives = 54/145 (36%), Gaps = 45/145 (31%)
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGG-------------GGGGCGRVA 75
VGGGGG G + + V IG G GG G G G A
Sbjct: 2844 VGGGGGSGGTAIAAAIG-----VPVFIGGDTGATGKGGDVTVTNTGQIRLTGNGSVGIFA 2898
Query: 76 ATVDGGGN-GGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW 134
+V GGG G+D ++ VA GGSG+GG VV V + + G
Sbjct: 2899 QSVGGGGGVVTAGTDGIVQAVA-------------GGSGNGG--VVTINSNVAMLITG-- 2941
Query: 135 *DGGGGGCSMVAATVEGEGNGGGGG 159
D G V G+ GGGGG
Sbjct: 2942 -DNSVG--------VFGQSIGGGGG 2957
Score = 33.9 bits (76), Expect = 2.3
Identities = 45/164 (27%), Positives = 56/164 (33%), Gaps = 61/164 (37%)
Query: 29 VGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGGCGR--------------- 73
VGG GGD GD + G GG GG G
Sbjct: 226 VGGDGGDGGDAKGISGDA----------------GDGGLGGSGGNATVNFNSGSVETQGN 269
Query: 74 ----VAATVDGG--GNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVV 127
+AA GG GNGGGG V GG +G+GG+ V V
Sbjct: 270 YSAGIAAISQGGHGGNGGGGGGLVFNPG------------GGSPAGAGGNANVFTGVGTT 317
Query: 128 LAMIGWW*DG-------GGGGCS-----MVAATVEGEGNGGGGG 159
+ G + G GGGG S + +++ GNGG GG
Sbjct: 318 ITTYGIYSHGIAAQSIGGGGGGSAGGFGLFSSSGGSGGNGGNGG 361
Score = 33.9 bits (76), Expect = 2.3
Identities = 53/196 (27%), Positives = 69/196 (35%), Gaps = 55/196 (28%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGG------CGRVAATVDGG 81
G G GGG D +V ++ G GGGGG GG G AA+V G
Sbjct: 764 GKGAGGGAGADVIVGSSGSIHTKGNNSTGILAQSVGGGGGNGGFTISAALGGGAASVGLG 823
Query: 82 GNGGGGSDRVMVVVA----------IWWWLW-------------CQWW*GGGGSGSGGDR 118
G G GS+ V V+ + W + GGGG+G
Sbjct: 824 GAGADGSNAGNVTVSADGAGHTVATTYTGTWNLVTEGKNAVGIQAESIGGGGGNGGFSGS 883
Query: 119 VVAAMVVVVLAMIGWW*DGGGGGCSMVAATVEGE--GN---------------------- 154
+ A +V V +G GGGGG + A G+ GN
Sbjct: 884 LAAGGLVGVGVSLGG--TGGGGGDAGTATVNNGKKVGNTVTHNNILTIEDNSTGILAQSI 941
Query: 155 GGGGGDRVVVVVLVVA 170
GGGGG+ V L V+
Sbjct: 942 GGGGGNGGFAVTLSVS 957
Score = 33.5 bits (75), Expect = 3.0
Identities = 48/166 (28%), Positives = 59/166 (34%), Gaps = 38/166 (22%)
Query: 29 VGGGGGDSGDRLVVVVA-TMVVVVVAMIGWWWWW*GGGGGGGGCGRVAATVDGGGN---- 83
VGG GG+ G + V+A T + A +G G GG G TVD G
Sbjct: 1986 VGGSGGNGGMAISGVIAGTDAKTLSASVG--------GFGGAGTNASKVTVDNTGAISTY 2037
Query: 84 ------------GGGGSDRVMVVVAIWWWLWCQWW*GGGGS--GSGGDRVVAAMVVVV-- 127
GGGG + M V A+ L G + G GGD A V V
Sbjct: 2038 GVESDAIQAQSIGGGGGNGGMAVSAVIGSLGTGTNFNAGVTVGGFGGDAGFAGDVFVTNH 2097
Query: 128 ------LAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVL 167
L G G G + A +V G GGG G + VL
Sbjct: 2098 GLLQTGLLAAGQTTTNGDGAYGIFAQSV---GGGGGSGGNAITGVL 2140
Score = 33.5 bits (75), Expect = 3.0
Identities = 43/150 (28%), Positives = 53/150 (34%), Gaps = 33/150 (22%)
Query: 28 GVGGGGGDSGDRLVVVVATMVVVVVAMIGWWWWW*GGGGGGGG--------CGRVAATVD 79
G GG GG D V T+ G GGGGG GG G V
Sbjct: 1293 GKGGVGGVGKDVTVTSTGTITTTGKFSNGILAQSIGGGGGNGGFAVAGSATTGNAGIGVG 1352
Query: 80 GGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAMVVVVLAMIGWW*DG-- 137
GG G GS V+V + + G+ G V+ A ++++ W G
Sbjct: 1353 VGGTGATGSASGKVIVNSYSLV-----------GANGQPVLLAPASNIVSI---WTQGDN 1398
Query: 138 ---------GGGGCSMVAATVEGEGNGGGG 158
GGGG S A G G GGGG
Sbjct: 1399 SSGIFAQSVGGGGGSGGFAGSLGVGLGGGG 1428
Score = 33.5 bits (75), Expect = 3.0
Identities = 36/117 (30%), Positives = 44/117 (36%), Gaps = 27/117 (23%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLW--------CQWW*GGGGSGSG 115
GG GGGG G V G G GG+ V V + Q GGGG +G
Sbjct: 283 GGNGGGGGGLVFNPGGGSPAGAGGNANVFTGVGTTITTYGIYSHGIAAQSIGGGGGGSAG 342
Query: 116 GDRVVAAMVVVVLAMIGWW*DGGGGGCSMVA--ATVEGEGN----------GGGGGD 160
G + ++ G +GG GG V A + GN GGGGGD
Sbjct: 343 GFGLFSSSG-------GSGGNGGNGGIVQVTNNANIATWGNNSQGILAQTIGGGGGD 392
Score = 33.1 bits (74), Expect = 4.0
Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 66 GGGGGCGRVAATVDGGG----NGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVA 121
GG GG G A TVD G G +V +I GGG G GGD V
Sbjct: 2236 GGAGGTGNDAMTVDVGNYDFITTDGDKSSGIVAQSI-----------GGGGGIGGDAYVG 2284
Query: 122 AMVVVVLAMIG----WW*DGGGGGCSMVAATVEGEGNGGGGGDRVVVVVLVVAVVT 173
++ + + G + TV GNG GGG+ V+V V+T
Sbjct: 2285 TGGLLAIPYVPVDPTLLLKPLGTSSLTRSGTVAIGGNGAGGGNGGTVIVANEGVIT 2340
Score = 32.0 bits (71), Expect = 8.8
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 18/99 (18%)
Query: 64 GGGGGGGCGRVAATVDGGGNGGGGSDRVMVVVAIWWWLWCQWW*GGGGSGSGGDRVVAAM 123
GGGGG G + + GN G V V V G G+G+ G
Sbjct: 2126 GGGGGSGGNAITGVLGLKGNNAGTQVNVSVAVG-----------GSAGNGNTGGN----- 2169
Query: 124 VVVVLAMIGWW*DGGGGGCSMVAATVEGEGNGGGGGDRV 162
V + G G G ++A ++ G G GG + +
Sbjct: 2170 --VTIRQYGGIETNGMGAFGILAQSIGGGGGTGGRANSI 2206
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.332 0.150 0.597
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 366,415,314
Number of Sequences: 2540612
Number of extensions: 20388668
Number of successful extensions: 384966
Number of sequences better than 10.0: 2722
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 1693
Number of HSP's that attempted gapping in prelim test: 229211
Number of HSP's gapped (non-prelim): 34176
length of query: 186
length of database: 863,360,394
effective HSP length: 120
effective length of query: 66
effective length of database: 558,486,954
effective search space: 36860138964
effective search space used: 36860138964
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0288.5